lammps →
0~20180510.gitaa1d815fe-4 →
armhf → 2018-05-20 23:51:15
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| lammps 0~20180510.gitaa1d815fe-4 (armhf) Sun, 20 May 2018 22:40:54 +0000 |
+==============================================================================+
Package: lammps
Version: 0~20180510.gitaa1d815fe-4
Source Version: 0~20180510.gitaa1d815fe-4
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-e6d51f18-4c00-47c4-b3aa-5b53943eebe2' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.5 MB]
Fetched 23.3 MB in 28s (836 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'lammps' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/lammps.git
Please use:
git clone https://salsa.debian.org/science-team/lammps.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 79.2 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main lammps 0~20180510.gitaa1d815fe-4 (dsc) [2233 B]
Get:2 http://172.17.0.1/private buster-staging/main lammps 0~20180510.gitaa1d815fe-4 (tar) [79.2 MB]
Get:3 http://172.17.0.1/private buster-staging/main lammps 0~20180510.gitaa1d815fe-4 (diff) [14.0 kB]
Fetched 79.2 MB in 35s (2288 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/lammps-J8A6jI/lammps-0~20180510.gitaa1d815fe' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/lammps-J8A6jI' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-zlf55V/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-zlf55V/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-zlf55V/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3243 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 52 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15721 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), libeigen3-dev, libfftw3-dev, libjpeg-dev, mpi-default-bin, mpi-default-dev
Filtered Build-Depends: debhelper (>= 11~), libeigen3-dev, libfftw3-dev, libjpeg-dev, mpi-default-bin, mpi-default-dev
dpkg-deb: building package 'sbuild-build-depends-lammps-dummy' in '/<<BUILDDIR>>/resolver-zlf55V/apt_archive/sbuild-build-depends-lammps-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-lammps-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Sources [524 B]
Get:5 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ Packages [606 B]
Fetched 2463 B in 1s (3801 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install lammps build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cpp-7 debhelper
dh-autoreconf dh-strip-nondeterminism file g++-7 gcc-7 gcc-7-base gettext
gettext-base groff-base ibverbs-providers intltool-debian
libarchive-zip-perl libasan4 libbsd0 libcilkrts5 libcroco3 libedit2
libeigen3-dev libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6
libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3
libfile-stripnondeterminism-perl libgcc-7-dev libgfortran4 libglib2.0-0
libgssapi-krb5-2 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev
libibverbs1 libicu57 libisl19 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200
libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix2 libsigsegv2
libssl1.0.2 libstdc++-7-dev libtimedate-perl libtool libubsan0 libxml2 m4
man-db mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin
openmpi-common openssh-client pkg-config po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-7-locales dh-make dwz gcc-7-doc libstdc++6-7-dbg libgcc1-dbg
libgomp1-dbg libitm1-dbg libatomic1-dbg libasan4-dbg liblsan0-dbg
libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg libquadmath0-dbg
gettext-doc libasprintf-dev libgettextpo-dev groff libeigen3-doc libmrpt-dev
libfftw3-doc krb5-doc krb5-user libhwloc-contrib-plugins libtool-doc
openmpi-doc pciutils libstdc++-7-doc gfortran | fortran95-compiler gcj-jdk
m4-doc apparmor less www-browser opencl-icd gfortran keychain libpam-ssh
monkeysphere ssh-askpass libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales xauth libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
ibverbs-providers intltool-debian libarchive-zip-perl libbsd0 libcroco3
libedit2 libeigen3-dev libevent-2.1-6 libevent-core-2.1-6
libevent-pthreads-2.1-6 libfftw3-bin libfftw3-dev libfftw3-double3
libfftw3-single3 libfile-stripnondeterminism-perl libgfortran4 libglib2.0-0
libgssapi-krb5-2 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev
libibverbs1 libicu57 libisl19 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200
libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix2 libsigsegv2
libssl1.0.2 libtimedate-perl libtool libxml2 m4 man-db mpi-default-bin
mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client
pkg-config po-debconf sbuild-build-depends-lammps-dummy
The following packages will be upgraded:
cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libcilkrts5 libgcc-7-dev
libstdc++-7-dev libubsan0
9 upgraded, 71 newly installed, 0 to remove and 43 not upgraded.
Need to get 39.5 MB/49.0 MB of archives.
After this operation, 106 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zlf55V/apt_archive ./ sbuild-build-depends-lammps-dummy 0.invalid.0 [892 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libasan4 armhf 7.3.0-19 [301 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libisl19 armhf 0.19-1 [427 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf g++-7 armhf 7.3.0-19 [5593 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf gcc-7 armhf 7.3.0-19 [5488 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf cpp-7 armhf 7.3.0-19 [5139 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libubsan0 armhf 7.3.0-19 [106 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libcilkrts5 armhf 7.3.0-19 [35.2 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libstdc++-7-dev armhf 7.3.0-19 [1506 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libgcc-7-dev armhf 7.3.0-19 [671 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf gcc-7-base armhf 7.3.0-19 [187 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2o-1 [888 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-2 [234 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-2 [106 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-2 [64.7 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libevent-2.1-6 armhf 2.1.8-stable-4 [156 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf openssh-client armhf 1:7.7p1-2 [672 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 17 [16.5 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.041-1 [12.0 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.2.1 [1013 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libibverbs1 armhf 17.1-2 [39.7 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf ibverbs-providers armhf 17.1-2 [19.4 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libeigen3-dev all 3.3.4-4 [841 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libevent-core-2.1-6 armhf 2.1.8-stable-4 [117 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libevent-pthreads-2.1-6 armhf 2.1.8-stable-4 [47.6 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libfftw3-double3 armhf 3.3.7-1+b2 [429 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libfftw3-single3 armhf 3.3.7-1+b2 [625 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libfftw3-bin armhf 3.3.7-1+b2 [43.8 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libfftw3-dev armhf 3.3.7-1+b2 [1051 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-2.1 [386 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libhwloc5 armhf 1.11.10-1+rpi1 [85.7 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libltdl-dev armhf 2.4.6-2.1 [158 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libhwloc-dev armhf 1.11.10-1+rpi1 [141 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libhwloc-plugins armhf 1.11.10-1+rpi1 [15.4 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libibverbs-dev armhf 17.1-2 [89.9 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libpmix2 armhf 2.1.1~rc1-4 [285 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libopenmpi3 armhf 3.0.1.real-3+rpi1 [1726 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf openmpi-common all 3.0.1.real-3+rpi1 [158 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf openmpi-bin armhf 3.0.1.real-3+rpi1 [199 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libopenmpi-dev armhf 3.0.1.real-3+rpi1 [929 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf mpi-default-bin armhf 1.13 [4672 B]
Get:63 http://172.17.0.1/private buster-staging/main armhf mpi-default-dev armhf 1.13 [5476 B]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up gcc-7-base:armhf (7.3.0-19) ...
Setting up libssl1.0.2:armhf (1.0.2o-1) ...
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Setting up libevent-pthreads-2.1-6:armhf (2.1.8-stable-4) ...
Setting up openmpi-common (3.0.1.real-3+rpi1) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Setting up autotools-dev (20180224.1) ...
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Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-1) ...
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libnl-3-200:armhf (3.2.27-2) ...
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Setting up libfftw3-bin (3.3.7-1+b2) ...
Setting up libltdl-dev:armhf (2.4.6-2.1) ...
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Setting up libgfortran4:armhf (7.3.0-19) ...
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Setting up libeigen3-dev (3.3.4-4) ...
Setting up libubsan0:armhf (7.3.0-19) ...
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Setting up autoconf (2.69-11) ...
Setting up file (1:5.33-2) ...
Setting up libhwloc5:armhf (1.11.10-1+rpi1) ...
Setting up libkrb5support0:armhf (1.16-2) ...
Setting up libgcc-7-dev:armhf (7.3.0-19) ...
Setting up cpp-7 (7.3.0-19) ...
Setting up libstdc++-7-dev:armhf (7.3.0-19) ...
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Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2.1) ...
Setting up libibverbs1:armhf (17.1-2) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up po-debconf (1.0.20) ...
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Setting up gcc-7 (7.3.0-19) ...
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Setting up libpmix2:armhf (2.1.1~rc1-4) ...
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Setting up libopenmpi3:armhf (3.0.1.real-3+rpi1) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up openssh-client (1:7.7p1-2) ...
Setting up openmpi-bin (3.0.1.real-3+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: error: no alternatives for mpi
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up mpi-default-bin (1.13) ...
Setting up libopenmpi-dev:armhf (3.0.1.real-3+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up mpi-default-dev (1.13) ...
Setting up dh-autoreconf (17) ...
Setting up dh-strip-nondeterminism (0.041-1) ...
Setting up debhelper (11.2.1) ...
Setting up sbuild-build-depends-lammps-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-15+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-19 gcc-7_7.3.0-19 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-19 libstdc++6_8-20180414-1+rpi1 linux-libc-dev_4.15.17-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-2+b1 binutils_2.30-15+rpi1 binutils-arm-linux-gnueabihf_2.30-15+rpi1 binutils-common_2.30-15+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.4+b1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-19 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 debconf_1.5.66 debhelper_11.2.1 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 e2fsprogs-l10n_1.44.1-2 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 g++_4:7.2.0-1d1 g++-7_7.3.0-19 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-19 gcc-7-base_7.3.0-19 gcc-8-base_8-20180414-1+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 ibverbs-providers_17.1-2 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-19 libassuan0_2.5.1-2 libatomic1_8-20180414-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.30-15+rpi1 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180414-1+rpi1 libcilkrts5_7.3.0-19 libcom-err2_1.44.1-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.91-2+rpi1 libdrm2_2.4.91-2+rpi1 libedit2_3.1-20170329-1 libeigen3-dev_3.3.4-4 libevent-2.1-6_2.1.8-stable-4 libevent-core-2.1-6_2.1.8-stable-4 libevent-pthreads-2.1-6_2.1.8-stable-4 libexpat1_2.2.5-3 libext2fs2_1.44.1-2 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfftw3-bin_3.3.7-1+b2 libfftw3-dev_3.3.7-1+b2 libfftw3-double3_3.3.7-1+b2 libfftw3-single3_3.3.7-1+b2 libfile-stripnondeterminism-perl_0.041-1 libgcc-7-dev_7.3.0-19 libgcc1_1:8-20180414-1+rpi1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran4_7.3.0-19 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180414-1+rpi1 libgpg-error0_1.29-4 libgssapi-krb5-2_1.16-2 libhogweed4_3.4-1 libhwloc-dev_1.11.10-1+rpi1 libhwloc-plugins_1.11.10-1+rpi1 libhwloc5_1.11.10-1+rpi1 libibverbs-dev_17.1-2 libibverbs1_17.1-2 libicu57_57.1-9 libidn11_1.33-2.2 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-4 libisl19_0.19-1 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 libltdl-dev_2.4.6-2.1 libltdl7_2.4.6-2.1 liblz4-1_1.8.1.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1-1 libncursesw5_6.1-1 libnettle6_3.4-1 libnl-3-200_3.2.27-2 libnl-route-3-200_3.2.27-2 libnpth0_1.5-3 libnss-systemd_238-4 libopenmpi-dev_3.0.1.real-3+rpi1 libopenmpi3_3.0.1.real-3+rpi1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpciaccess0_0.14-1 libpcre3_2:8.39-9 libperl5.24_5.24.1-7 libperl5.26_5.26.2-2 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpmix2_2.1.1~rc1-4 libpng16-16_1.6.34-1 libprocps6_2:3.3.14-1 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssl1.0.2_1.0.2o-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-19 libstdc++6_8-20180414-1+rpi1 libsystemd0_238-4 libtasn1-6_4.13-2 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtool_2.4.6-2.1 libubsan0_7.3.0-19 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libxml2_2.9.4+dfsg1-6.1 libzstd1_1.3.3+dfsg-2+rpi1 linux-base_4.5 linux-libc-dev_4.15.17-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mount_2.31.1-0.5 mpi-default-bin_1.13 mpi-default-dev_1.13 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 netbase_5.4 ocl-icd-libopencl1_2.2.12-1 openmpi-bin_3.0.1.real-3+rpi1 openmpi-common_3.0.1.real-3+rpi1 openssh-client_1:7.7p1-2 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-2 perl-base_5.26.2-2 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-3 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.14-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lammps-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018d-1 udev_238-4 util-linux_2.31.1-0.5 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue May 15 16:26:18 2018 UTC
gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./lammps_0~20180510.gitaa1d815fe-4.dsc
dpkg-source: info: extracting lammps in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking lammps_0~20180510.gitaa1d815fe.orig.tar.xz
dpkg-source: info: unpacking lammps_0~20180510.gitaa1d815fe-4.debian.tar.xz
dpkg-source: info: applying 10_set_configure_flags.patch
dpkg-source: info: applying 11_tex_ascii.patch
dpkg-source: info: applying 12_disable_user-intel.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-e6d51f18-4c00-47c4-b3aa-5b53943eebe2
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package lammps
dpkg-buildpackage: info: source version 0~20180510.gitaa1d815fe-4
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build lammps-0~20180510.gitaa1d815fe
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd src; make clean-all
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
rm -rf Obj_*
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
dh_clean
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dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd src; /usr/bin/make yes-all; /usr/bin/make no-lib; /usr/bin/make mpi
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Installing package asphere
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package kspace
updating package CORESHELL
updating src/pair_born_coul_long_cs.cpp
updating src/pair_buck_coul_long_cs.cpp
updating src/pair_born_coul_long_cs.h
updating src/pair_buck_coul_long_cs.h
updating src/pair_coul_long_cs.cpp
updating src/pair_coul_long_cs.h
updating src/pair_lj_cut_coul_long_cs.cpp
updating src/pair_lj_cut_coul_long_cs.h
updating package GPU
updating src/pair_born_coul_long_gpu.cpp
updating src/pair_born_coul_long_gpu.h
updating src/pair_buck_coul_long_gpu.cpp
updating src/pair_buck_coul_long_gpu.h
updating src/pair_coul_long_gpu.cpp
updating src/pair_coul_long_gpu.h
updating src/pair_lj_charmm_coul_long_gpu.cpp
updating src/pair_lj_charmm_coul_long_gpu.h
updating src/pair_lj_cut_coul_long_gpu.cpp
updating src/pair_lj_cut_coul_long_gpu.h
updating src/pair_lj_cut_coul_msm_gpu.cpp
updating src/pair_lj_cut_coul_msm_gpu.h
updating src/pppm_gpu.cpp
updating src/pppm_gpu.h
updating package KOKKOS
updating src/gridcomm_kokkos.cpp
updating src/gridcomm_kokkos.h
updating src/pair_buck_coul_long_kokkos.cpp
updating src/pair_buck_coul_long_kokkos.h
updating src/pair_coul_long_kokkos.cpp
updating src/pair_coul_long_kokkos.h
updating src/pair_lj_charmm_coul_long_kokkos.cpp
updating src/pair_lj_charmm_coul_long_kokkos.h
updating src/pair_lj_cut_coul_long_kokkos.cpp
updating src/pair_lj_cut_coul_long_kokkos.h
updating src/pppm_kokkos.cpp
updating src/pppm_kokkos.h
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package latte
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package manybody
updating package GPU
updating src/pair_eam_alloy_gpu.cpp
updating src/pair_eam_alloy_gpu.h
updating src/pair_eam_fs_gpu.cpp
updating src/pair_eam_fs_gpu.h
updating src/pair_eam_gpu.cpp
updating src/pair_eam_gpu.h
updating src/pair_sw_gpu.cpp
updating src/pair_sw_gpu.h
updating src/pair_vashishta_gpu.cpp
updating src/pair_vashishta_gpu.h
updating src/pair_tersoff_gpu.cpp
updating src/pair_tersoff_gpu.h
updating src/pair_tersoff_mod_gpu.cpp
updating src/pair_tersoff_mod_gpu.h
updating src/pair_tersoff_zbl_gpu.cpp
updating src/pair_tersoff_zbl_gpu.h
updating package KOKKOS
updating src/pair_eam_kokkos.cpp
updating src/pair_eam_kokkos.h
updating src/pair_eam_alloy_kokkos.cpp
updating src/pair_eam_alloy_kokkos.h
updating src/pair_eam_fs_kokkos.cpp
updating src/pair_eam_fs_kokkos.h
updating src/pair_sw_kokkos.cpp
updating src/pair_sw_kokkos.h
updating src/pair_vashishta_kokkos.cpp
updating src/pair_vashishta_kokkos.h
updating src/pair_tersoff_kokkos.cpp
updating src/pair_tersoff_kokkos.h
updating src/pair_tersoff_mod_kokkos.cpp
updating src/pair_tersoff_mod_kokkos.h
updating src/pair_tersoff_zbl_kokkos.cpp
updating src/pair_tersoff_zbl_kokkos.h
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package mc
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package meam
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package misc
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package molecule
updating package GPU
updating package KOKKOS
updating src/angle_charmm_kokkos.cpp
updating src/angle_charmm_kokkos.h
updating src/angle_harmonic_kokkos.cpp
updating src/angle_harmonic_kokkos.h
updating src/atom_vec_angle_kokkos.cpp
updating src/atom_vec_angle_kokkos.h
updating src/atom_vec_bond_kokkos.cpp
updating src/atom_vec_bond_kokkos.h
updating src/atom_vec_full_kokkos.cpp
updating src/atom_vec_full_kokkos.h
updating src/atom_vec_molecular_kokkos.cpp
updating src/atom_vec_molecular_kokkos.h
updating src/bond_fene_kokkos.cpp
updating src/bond_fene_kokkos.h
updating src/bond_harmonic_kokkos.cpp
updating src/bond_harmonic_kokkos.h
updating src/dihedral_charmm_kokkos.cpp
updating src/dihedral_charmm_kokkos.h
updating src/dihedral_opls_kokkos.cpp
updating src/dihedral_opls_kokkos.h
updating src/improper_harmonic_kokkos.cpp
updating src/improper_harmonic_kokkos.h
updating src/pair_lj_charmm_coul_charmm_implicit_kokkos.cpp
updating src/pair_lj_charmm_coul_charmm_implicit_kokkos.h
updating src/pair_lj_charmm_coul_charmm_kokkos.cpp
updating src/pair_lj_charmm_coul_charmm_kokkos.h
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package mpiio
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package mscg
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package opt
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package peri
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package poems
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package python
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package snap
updating package KOKKOS
updating src/pair_snap_kokkos.cpp
updating src/pair_snap_kokkos.h
updating src/pair_snap_kokkos_impl.h
updating src/sna_kokkos.h
updating src/sna_kokkos_impl.h
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package srd
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package user-cgdna
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Installing package user-cgsdk
updating package GPU
updating src/pair_lj_sdk_coul_long_gpu.cpp
updating src/pair_lj_sdk_coul_long_gpu.h
updating src/pair_lj_sdk_gpu.cpp
updating src/pair_lj_sdk_gpu.h
updating package KOKKOS
updating src/pair_lj_sdk_kokkos.cpp
updating src/pair_lj_sdk_kokkos.h
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package user-colvars
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package user-diffraction
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
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Installing package user-dpd
updating package KOKKOS
updating src/atom_vec_dpd_kokkos.cpp
updating src/atom_vec_dpd_kokkos.h
updating src/fix_eos_table_rx_kokkos.cpp
updating src/fix_eos_table_rx_kokkos.h
updating src/fix_shardlow_kokkos.cpp
updating src/fix_shardlow_kokkos.h
updating src/fix_dpd_energy_kokkos.cpp
updating src/fix_dpd_energy_kokkos.h
updating src/fix_rx_kokkos.cpp
updating src/fix_rx_kokkos.h
updating src/npair_ssa_kokkos.cpp
updating src/npair_ssa_kokkos.h
updating src/nbin_ssa_kokkos.cpp
updating src/nbin_ssa_kokkos.h
updating src/pair_dpd_fdt_energy_kokkos.cpp
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mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_class2.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_bin_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_dsf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_class2_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_long_dipole_long.cpp
../improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
../improper_class2.cpp:822:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fabcd[0],fabcd[2],fabcd[3],
~~~~~~~~~~~~~~~~~~~~~~~~~~~
delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
../pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_dsf.cpp:489:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
../pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
../pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_erotate_sphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_external.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_resquared.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_dihedral_template.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../image.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nve_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_nsq_omp.cpp
../image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
../image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
tdir[2] = camDir[2] * t;
~~~~~~~~~~^~~
../pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
../pair_resquared.cpp:195:26: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (eflag) evdwl = factor_lj*one_eng;
~~~~~~^~~~~~~~~~~~~~~~~~~
../npair_full_nsq_omp.cpp: In function '_ZN9LAMMPS_NS15NPairFullNsqOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_full_nsq_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_full_nsq_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~~
../npair_full_nsq_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_bin_atomonly_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_morse_smooth_linear.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_halffull_newton_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../neigh_list.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_dipole_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_edpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_nsq.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../rerun.cpp
../pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_dipole_cut_omp.cpp:256:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp*r3inv*pjdotr;
~~~~~~~~~~^~~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:254:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j]*r3inv*pidotr;
~~~~~~~~~~~^~~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:252:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
~~~~~^~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
~~~^~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:254:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j]*r3inv*pidotr;
~~~~~^~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:261:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
../npair_full_nsq.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_dipole_cut_omp.cpp:256:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp*r3inv*pjdotr;
~~~~~~~~~~^~~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:254:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j]*r3inv*pidotr;
~~~~~~~~~~~^~~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:252:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
~~~~~^~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
~~~^~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:254:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j]*r3inv*pidotr;
~~~~~^~~~~~
../pair_lj_cut_dipole_cut_omp.cpp:261:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
../pair_edpd.cpp:224:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
Q[j] -= ( dQc - dQd + dQr );
~~~~~~~~~~~~^~~~~~~
../pair_edpd.cpp:224:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
Q[j] -= ( dQc - dQd + dQr );
~~~~^~~~~
../pair_edpd.cpp:224:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_ufm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_chunk_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_mdpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_charge.cpp
../compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
../compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (xremap < boxlo[idim]) xremap += prd[idim];
^
../compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (xremap >= boxhi[idim]) xremap -= prd[idim];
^
../compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (xremap < boxlo[idim]) xremap += prd[idim];
^
../compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
../compute_chunk_atom.cpp:1614:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (yremap < boxlo[jdim]) yremap += prd[jdim];
^
../compute_chunk_atom.cpp:1615:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
^
../compute_chunk_atom.cpp:1614:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (yremap < boxlo[jdim]) yremap += prd[jdim];
^
../compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
../compute_chunk_atom.cpp:1747:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zremap < boxlo[kdim]) zremap += prd[kdim];
^
../compute_chunk_atom.cpp:1748:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
^
../compute_chunk_atom.cpp:1747:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zremap < boxlo[kdim]) zremap += prd[kdim];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_plane.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_adp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_eff.cpp
../compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
../compute_chunk_atom.cpp:416:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (minflag[idim] == COORD) minvalue[idim] *= scale;
~~~~~~~~~~~~~~~^~~~~~~~
../compute_chunk_atom.cpp:263:24: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized]
maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]);
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../compute_chunk_atom.cpp:198:18: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (iarg+2 > narg) error->all(FLERR,"Illegal compute chunk/atom command");
~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_table_rx.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj96_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_beck_omp.cpp
../pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
../pair_table_rx.cpp:580:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2 = nMolecules2;
~~~~~~~~~~~^~~~~~~~~~~~~
../pair_table_rx.cpp:579:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2old = nMoleculesOld2;
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
../pair_table_rx.cpp:575:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2 = fraction2;
~~~~~~~~~~~^~~~~~~~~~~
../pair_table_rx.cpp:574:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2old = fractionOld2;
~~~~~~~~~~~~~~^~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nve.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../write_dump.cpp
../pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
../pair_adp.cpp:641:24: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (me == 0) grab(fp,file->nr,&file->w2r[i][j][1]);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reset_ids.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_bin_atomonly.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_angle_local.cpp
../write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)':
../write_dump.cpp:84:14: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized]
dump->write();
~~~~~~~~~~~^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_mdf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_plane.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../random_mars.cpp
../compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
../compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
^
../compute_angle_local.cpp:116:17: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
double *tbuf,*ebuf;
^~~~
../compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
tbuf[n] = 180.0*acos(c)/MY_PI;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_eos_table_rx.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_ufm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_fourier_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_expand.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_langevin_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_fourier.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pressure_uef.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_cossq_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_hbond_dreiding_morse.cpp
../fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_wall.cpp:77:24: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
wallwhich[nwall] = newwall;
~~~~~~~~~~~~~~~~~^~~~~~~~~
../compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
../compute_pressure_uef.cpp:150:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
~~~~~~~~~~~^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_manifoldforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_asphere.cpp
../pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
../pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (donor_flag == 0) type2param[i][j][k] = nparams;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_edip.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj96_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_beck.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cubic_omp.cpp
../pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
../pair_lj96_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair = factor_lj*forcelj*r2inv;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj96_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cubic_omp.cpp:150:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(PHIS + DPHIDS*t - A3*t*t*t/6.0);
~~~~~~^~
../pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
^~~~~
../pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cubic_omp.cpp:150:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(PHIS + DPHIDS*t - A3*t*t*t/6.0);
~~~~~~^~
../pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
^~~~~
../pair_edip.cpp: In member function 'void LAMMPS_NS::PairEDIP::read_file(char*)':
../pair_edip.cpp:895:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gw_zbl.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pair_local.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nphug_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_allocate.cpp
../pair_gw_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairGWZBL::read_file(char*)':
../pair_gw_zbl.cpp:94:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_bin_newton_tri_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../imbalance_var.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_time.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_io_tools.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_setforce.cpp
../npair_half_respa_bin_newton_tri_omp.cpp: In function '_ZN9LAMMPS_NS29NPairHalfRespaBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_respa_bin_newton_tri_omp.cpp:154:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~~
../npair_half_respa_bin_newton_tri_omp.cpp:154:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~
../npair_half_respa_bin_newton_tri_omp.cpp:173:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
../npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~~~~~
../npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
int *neighptr,*neighptr_inner,*neighptr_middle;
^~~~~~~~~~~~~~~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_bin_newton_tri_omp.cpp:17:
../my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
errorflag = 2;
^~~~~~~~~
../npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../reaxc_io_tools.cpp: In function 'int Init_Output_Files(reax_system*, control_params*, output_controls*, mpi_datatypes*, char*)':
../reaxc_io_tools.cpp:37:5: warning: '.pot' directive writing 4 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
int Init_Output_Files( reax_system *system, control_params *control,
^~~~~~~~~~~~~~~~~
../reaxc_io_tools.cpp:55:14: note: 'sprintf' output between 5 and 1028 bytes into a destination of size 1024
sprintf( temp, "%s.pot", control->sim_name );
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../reaxc_io_tools.cpp:37:5: warning: '.prs' directive writing 4 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
int Init_Output_Files( reax_system *system, control_params *control,
^~~~~~~~~~~~~~~~~
../reaxc_io_tools.cpp:71:14: note: 'sprintf' output between 5 and 1028 bytes into a destination of size 1024
sprintf( temp, "%s.prs", control->sim_name );
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_asphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_wolf_omp.cpp
../fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
../fix_ave_time.cpp:968:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
else if (lengthone != length)
^~
../fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
../fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
else vector[i] += scalar;
~~~~~~~~~~^~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_nonlinear.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_piston.cpp
../fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (value == -1)
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_soft.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna_xstk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sf_dipole_sf_omp.cpp
../fix_wall_piston.cpp: In member function 'virtual void LAMMPS_NS::FixWallPiston::post_integrate()':
../fix_wall_piston.cpp:289:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zloflag && x[i][2] < zlo - roughoff) {
~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_dotc_langevin.cpp
../pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_soft.cpp:755:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
../pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
../pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
../pair_lj_cut_soft.cpp:414:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_sf_dipole_sf_omp.cpp:291:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rsq*rcutlj2inv+
~~~^~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:279:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:283:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:281:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:279:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~^~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:281:30: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:288:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_uef.cpp
../pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_sf_dipole_sf_omp.cpp:291:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rsq*rcutlj2inv+
~~~^~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:279:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:283:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:281:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:279:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~^~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:281:30: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf_omp.cpp:288:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_shift_exp_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_fourier_simple.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_evaporate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_streitz.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_stress_tally.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_bin_ghost.cpp
../fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
../fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
} else if (me == proc && i == iatom) {
~~~~~~~~~~~^~~~~~~~~~~~~
../pair_coul_streitz.cpp: In member function 'virtual void LAMMPS_NS::PairCoulStreitz::read_file(char*)':
../pair_coul_streitz.cpp:275:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_ring.cpp
../npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
../npair_full_bin_ghost.cpp:108:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_orient_bcc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_hybrid_overlay.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_long_omp.cpp
../pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
../pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
int multflag;
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../comm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_nsq_newton.cpp
../pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_born_coul_long_omp.cpp:172:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_long_omp.cpp:175:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_born_coul_long_omp.cpp:171:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_born_coul_long_omp.cpp:175:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_damage_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_sphere.cpp
../npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
../npair_half_respa_nsq_newton.cpp:165:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_nsq_newton.cpp:147:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newton.cpp:165:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_nsq_newton.cpp:16:
../my_page.h:172:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ndatum += n;
~~~~~~~^~~~
../npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_nsq_newton.cpp:189:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newton.cpp:190:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_nsq_newton.cpp:188:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[inum] = i;
~~~~~~~~~~~~~~~~~~~^~~
../npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../group.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_alloy.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_wolf.cpp
../pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
../pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc-e_shift*r);
~~~~~~^~~~~~~~~~~
../pair_coul_wolf.cpp:318:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc-e_shift*r);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc-e_shift*r);
~~~~~~~^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_msm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_xyz.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_plane_wiggle.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../mgpt_splinetab.cpp
../pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_msm_omp.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_lj_cut_coul_msm_omp.cpp:192:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_msm_omp.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sf_dipole_sf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rattle.cpp
../group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)':
../group.cpp:301:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized]
else if (category == MOLECULE) tattribute = atom->molecule;
^~
../pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_msm_omp.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_lj_cut_coul_msm_omp.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm_omp.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_dumbbell.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_cosine_shift_exp_omp.cpp
../pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
../pair_lj_sf_dipole_sf.cpp:281:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf.cpp:280:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rsq*rcutlj2inv+
~~~^~~~~~~~~~~
../pair_lj_sf_dipole_sf.cpp:273:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf.cpp:271:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf.cpp:269:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf.cpp:273:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf.cpp:271:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf.cpp:269:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~
../pair_lj_sf_dipole_sf.cpp:269:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~^~~~~~
../pair_lj_sf_dipole_sf.cpp:271:30: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf.cpp:278:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
~~~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_event.cpp
../pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
../pair_lj_sf_dipole_sf.cpp:626:17: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf.cpp:625:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rsq*rcutlj2inv+
~~~^~~~~~~~~~~
../pair_lj_sf_dipole_sf.cpp:623:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_sf_dipole_sf.cpp:618:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf.cpp:616:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf.cpp:614:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_sf_dipole_sf.cpp:614:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~^~~~~~
../pair_lj_sf_dipole_sf.cpp:616:22: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~^~~~~~~
../pair_lj_sf_dipole_sf.cpp:618:37: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp * r3inv * qpfac * pjdotr;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf.cpp:616:38: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j] * r3inv * pqfac * pidotr;
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_lj_sf_dipole_sf.cpp:614:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_controller.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_debye_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_bonds_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_omp.cpp
../pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
^~~~~
../pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_debye_omp.cpp:162:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
^~~~~
../pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_debye_omp.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_spring_rg.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_momb.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_viscous.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_morse_opt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_spec_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_multi_newton_tri.cpp
../pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_long.cpp:568:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_long.cpp:559:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
../pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_long.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
+ d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qbmsst.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_edip_omp.cpp
../npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
../npair_half_multi_newton_tri.cpp:121:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min_linesearch.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_move.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_sphere.cpp
../fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
../fix_move.cpp:844:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
~~~~~~~~~~~~~~~~^~~~
../fix_move.cpp:814:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
~~~~~~~~~~~~~~~~^~~~
../fix_move.cpp:784:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
~~~~~~~~~~~~~~~~^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_charmm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../remap.cpp
../fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_move.cpp:177:18: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (iarg+2 > narg) error->all(FLERR,"Illegal fix move command");
~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_cone.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ehex.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_msm.cpp
../region_cone.cpp: In member function 'virtual int LAMMPS_NS::RegCone::surface_exterior(double*, double)':
../region_cone.cpp:596:16: warning: '*((void*)& nearest +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
add_contact(0,x,nearest[0],nearest[1],nearest[2]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../region_cone.cpp:596:16: warning: '*((void*)& nearest +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
../region_cone.cpp:596:16: warning: 'nearest' may be used uninitialized in this function [-Wmaybe-uninitialized]
../fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
../fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
fshake = ((FixShake*) modify->fix[id_shake]);
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_flow_gauss.cpp
../pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_msm.cpp:476:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:466:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*egamma;
~~~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
../pair_lj_cut_coul_msm.cpp:367:64: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:390:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * fgamma;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:366:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = ptable[itable] + fraction*dptable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = vtable[itable] + fraction*dvtable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_msm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_nsq_ghost_omp.cpp
../pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
../pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:204:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../create_atoms.cpp
../pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
../pair_coul_msm.cpp:207:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*egamma;
~~~~~~~~^~~~~~~~~~~~~~~~~~
../pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_msm.cpp:207:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*egamma;
~~~~~~~~^~~~~~~~~~~~~~~~~~
../npair_full_nsq_ghost_omp.cpp: In function '_ZN9LAMMPS_NS20NPairFullNsqGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_full_nsq_ghost_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_full_nsq_ghost_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~~
../npair_full_nsq_ghost_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~
../pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
../pair_coul_msm.cpp:147:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_coul_msm.cpp:147:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_nonlinear_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmmfsw_coul_charmmfsh.cpp
../create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
../create_atoms.cpp:657:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
~~~~~~~^
../create_atoms.cpp:657:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
~~~~~~~^
../create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
../create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
ranmol = new RanMars(lmp,molseed+comm->me);
^
../create_atoms.cpp:120:18: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (iarg+3 > narg) error->all(FLERR,"Illegal create_atoms command");
~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_meso_rho_atom.cpp
../pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmmfsw_coul_charmmfsh.cpp:527:16: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
(r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
~~~~~~~^~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
(r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
~~~~~~~^~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
../pair_lj_charmmfsw_coul_charmmfsh.cpp:189:24: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
(r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
~~~~~~~^~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_charmmfsh.cpp:99:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,j,ii,jj,inum,jnum,itype,jtype;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../gridcomm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_bonds.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../replicate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_angle_partial.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_read_restart.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_shield.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_nonbonded.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_bin_newtoff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_hybrid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_cs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_2d_newton.cpp
../npair_half_respa_bin_newtoff_omp.cpp: In function '_ZN9LAMMPS_NS27NPairHalfRespaBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~~
../npair_half_respa_bin_newtoff_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~
../npair_half_respa_bin_newtoff_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
../npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
int *neighptr,*neighptr_inner,*neighptr_middle;
^~~~~~~~~~~~~~~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_bin_newtoff_omp.cpp:17:
../my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
errorflag = 2;
^~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:192:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:191:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newtoff_omp.cpp:190:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[i] = i;
~~~~~~~~~~~~~~~~^~~
../npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_erotate_asphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_store.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_molecular.cpp
../compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
../compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertia[0] = tbonus[tri[i]].inertia[0];
^
../compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
length = lbonus[line[i]].length;
^
../compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sdk_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_spine.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_zero.cpp
In file included from ../pair_lj_sdk_omp.cpp:24:0:
../lj_sdk_common.h:30:14: warning: 'int LAMMPS_NS::LJSDKParms::find_lj_type(const char*, const char* const*)' defined but not used [-Wunused-function]
static int find_lj_type(const char *label,
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_contact_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_sphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_intersect.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_langevin.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_angmom_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_nsq_ghost.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_bin.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_nsq_newton_omp.cpp
../npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
../npair_full_nsq_ghost.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
../npair_full_bin.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_planeforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_sna_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_dilatation_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gauss_cut.cpp
../compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
../compute_dilatation_atom.cpp:106:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
double *theta;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_class2_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_bin_newtoff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_npt_small.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_store_state.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_smooth.cpp
../pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
../pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
~~~~~~~~~~~~~~~~~~~~~~~^~~~
../pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
~~~~~~~~~~~~~~~~~~~~~~~^~
../pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
../pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
~~~~~~~~~~~~~~~~~~~~~~~^~~~
../pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
~~~~~~~~~~~~~~~~~~~~~~~^~
../pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv -
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
lj4[itype][jtype]) - offset[itype][jtype];
~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_soft.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_cna_atom.cpp
../region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
../region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
contact[i].delz = xorig[2] - zs;
~~~~~~~~~^~~~
../region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
contact[i].dely = xorig[1] - ys;
~~~~~~~~~^~~~
../region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
contact[i].delx = xorig[0] - xs;
~~~~~~~~~^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_improper_partial.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sdk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_sdk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_spring_chunk.cpp
In file included from ../angle_sdk.cpp:34:0:
../lj_sdk_common.h:30:14: warning: 'int LAMMPS_NS::LJSDKParms::find_lj_type(const char*, const char* const*)' defined but not used [-Wunused-function]
static int find_lj_type(const char *label,
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_temp_rescale.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lubricateU.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_slater.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_gle.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_mod_c.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nph_small.cpp
../pair_tersoff_mod_c.cpp: In member function 'virtual void LAMMPS_NS::PairTersoffMODC::read_file(char*)':
../pair_tersoff_mod_c.cpp:72:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_drude.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../write_restart.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_asphere_noforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ackland_atom.cpp
../fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
../fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = bonus[ellipsoid[i]].shape;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_hybrid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_temp_csvr.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../write_coeff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_harmonic_shift_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min_cg.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_cnp_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min_sd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../verlet.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../kspace.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_vashishta_omp.cpp
../pair_tersoff.cpp: In member function 'virtual void LAMMPS_NS::PairTersoff::read_file(char*)':
../pair_tersoff.cpp:421:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_phonon.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../integrate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_asphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_ring_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_nharmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nph.cpp
../fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
../fix_phonon.cpp:818:20: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
idr = irow*n+l;
~~~~^~
../fix_phonon.cpp:788:9: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,icol,irow,j,k,l,ll,idr,idc;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_adapt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_heat_flux_tally.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_fourier_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eim_omp.cpp
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
../fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_kolmogorov_crespi_z.cpp
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
../fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
../fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
../fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
../fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
../fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
../fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_yukawa_colloid_omp.cpp
../pair_kolmogorov_crespi_z.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiZ::read_file(char*)':
../pair_kolmogorov_crespi_z.cpp:332:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_full_ghost_bin_3d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../msm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_multi_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_atomic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_brownian_poly.cpp
../npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
../npair_half_multi_newton.cpp:146:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_restrain.cpp
../pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
../pair_brownian_poly.cpp:83:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
double xl[3],a_sq,a_sh,a_pu,Fbmag;
^~~~
../pair_brownian_poly.cpp:83:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
double xl[3],a_sq,a_sh,a_pu,Fbmag;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_helix.cpp
../fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
../fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
df1 = df1*cos_target[m] - ddf1*sin_target[m];
~~~~^~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newtoff_ghost_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_multi_harmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_atom.cpp
../npair_half_bin_newtoff_ghost_omp.cpp: In function '_ZN9LAMMPS_NS27NPairHalfBinNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_bin_newtoff_ghost_omp.cpp:125:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~~
../npair_half_bin_newtoff_ghost_omp.cpp:125:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_hbond_dreiding_morse_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_mgpt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_msm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_dipole_cut.cpp
../pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
../pair_mgpt.cpp:594:24: warning: unused variable 'mx' [-Wunused-variable]
int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
^~
../pair_mgpt.cpp:594:27: warning: unused variable 'itag' [-Wunused-variable]
int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
^~~~
../pair_mgpt.cpp:594:32: warning: unused variable 'jtag' [-Wunused-variable]
int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
^~~~
../pair_mgpt.cpp:599:10: warning: unused variable 'nbc' [-Wunused-variable]
double nbc = 0.0,tbl = 0.0,tbm = 0.0;
^~~
../pair_mgpt.cpp:599:20: warning: unused variable 'tbl' [-Wunused-variable]
double nbc = 0.0,tbl = 0.0,tbm = 0.0;
^~~
../pair_mgpt.cpp:599:30: warning: unused variable 'tbm' [-Wunused-variable]
double nbc = 0.0,tbl = 0.0,tbm = 0.0;
^~~
../pair_mgpt.cpp:600:13: warning: unused variable 'lmax_local' [-Wunused-variable]
const int lmax_local = lmax;
^~~~~~~~~~
../pair_mgpt.cpp:609:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
double t0,t1;
^~
../pair_mgpt.cpp:609:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
double t0,t1;
^~
../pair_mgpt.cpp:618:18: warning: unused variable 'tsort' [-Wunused-variable]
double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
^~~~~
../pair_mgpt.cpp:618:42: warning: unused variable 'tlookup' [-Wunused-variable]
double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
^~~~~~~
../pair_mgpt.cpp:620:10: warning: unused variable 'ntsort' [-Wunused-variable]
double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
^~~~~~
../pair_mgpt.cpp:620:36: warning: unused variable 'ntlookup' [-Wunused-variable]
double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
^~~~~~~~
../pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
../pair_mgpt.cpp:1839:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
^~~~~~~~~~~
../pair_mgpt.cpp:1839:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
^~~~~~~~~~~~~
../pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
../pair_mgpt.cpp:2150:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2254:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2151:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2254:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2152:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2254:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2153:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2254:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2150:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2289:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2151:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2289:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2152:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2289:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2153:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2289:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2150:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2317:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2151:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2317:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2152:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2317:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2153:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2317:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2150:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2338:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2151:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2338:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2152:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2338:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2153:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2338:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2150:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2352:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2151:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2352:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2152:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2352:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2153:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2352:3: note: in expansion of macro 'MAKE_ELEMENT_5'
MAKE_ELEMENT_5(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2474:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2474:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2474:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2474:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(1,1);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2579:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2579:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2579:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2579:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(2,2);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2669:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2669:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2669:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2669:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(3,3);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2744:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2744:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2744:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2744:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(4,4);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2804:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2804:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2804:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2804:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(5,5);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2848:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(6,6);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2848:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(6,6);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2848:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(6,6);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2848:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(6,6);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2169:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
M [j][i] = M[i][j] = fl *tmp; \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2878:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(7,7);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2170:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2878:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(7,7);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2171:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2878:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(7,7);
^~~~~~~~~~~~~~
../pair_mgpt.cpp:2172:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum); \
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mgpt.cpp:2878:3: note: in expansion of macro 'MAKE_ELEMENT_7'
MAKE_ELEMENT_7(7,7);
^~~~~~~~~~~~~~
../pair_mgpt.cpp: At global scope:
../pair_mgpt.cpp:576:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
static void tr_count(const double * restrict A,
^~~~~~~~
../pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
../pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
../pair_buck_coul_msm.cpp:238:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*egamma;
~~~~~~~~^~~~~~~~~~~~~~~~~~
../pair_buck_coul_msm.cpp:238:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
../pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck_coul_msm.cpp:181:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sph_heatconduction.cpp
../pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
../pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += qtmp*r3inv*pjdotr;
~~~~~~~~~~^~~~~~~
../pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j]*r3inv*pidotr;
~~~~~~~~~~~^~~~~~~
../pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
~~~~~^~~~~~
../pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
~~~^~~~~~
../pair_lj_cut_dipole_cut.cpp:238:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += -q[j]*r3inv*pidotr;
~~~~~^~~~~~
../pair_lj_cut_dipole_cut.cpp:245:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sph_idealgas.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_thole_long_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_zero.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_bond_all.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_fs_opt.cpp
../pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_thole_long_omp.cpp:246:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
../pair_lj_cut_thole_long_omp.cpp:247:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long_omp.cpp:210:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
../pair_lj_cut_thole_long_omp.cpp:242:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = qi*qj * table;
~~^~~
../pair_lj_cut_thole_long_omp.cpp:247:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_thole_long_omp.cpp:244:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_thole_long_omp.cpp:241:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_thole_long_omp.cpp:252:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid.cpp
../pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_thole_long_omp.cpp:246:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
../pair_lj_cut_thole_long_omp.cpp:247:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long_omp.cpp:210:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
../pair_lj_cut_thole_long_omp.cpp:242:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = qi*qj * table;
~~^~~
../pair_lj_cut_thole_long_omp.cpp:247:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_thole_long_omp.cpp:244:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_thole_long_omp.cpp:241:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_thole_long_omp.cpp:252:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
../pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j != di_closest){
^~
../pair_lj_cut_thole_long_omp.cpp:210:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
../pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
../pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j != di_closest){
^~
../pair_lj_cut_thole_long_omp.cpp:210:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
../pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
../pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j != di_closest){
^~
../pair_lj_cut_thole_long_omp.cpp:210:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_dipole_long.cpp
../pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
../pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j != di_closest){
^~
../pair_lj_cut_thole_long_omp.cpp:210:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
../fix_rigid.cpp: In member function 'virtual void LAMMPS_NS::FixRigid::init()':
../fix_rigid.cpp:733:78: warning: format '%d' expects argument of type 'int', but argument 3 has type 'char*' [-Wformat=]
sprintf(str,"Fix %d alters forces after fix rigid",modify->fix[i]->id);
~~~~~~~~~~~~~~~~~~^
../fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::compute_forces_and_torques()':
../fix_rigid.cpp:1033:10: warning: unused variable 'dtfm' [-Wunused-variable]
double dtfm;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_class2_omp.cpp
../pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
../pair_lj_cut_dipole_long.cpp:297:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:297:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:297:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:294:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:294:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:294:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:297:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:297:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:297:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
~~^~~
../pair_lj_cut_dipole_long.cpp:302:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_tool_box.cpp
../fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_rigid.cpp:397:23: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
tflag[m-1][2] = zflag;
~~~~~~~~~~~~~~^~~~~~~
../fix_rigid.cpp:390:60: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
~~~~~~^~~~~~
../fix_rigid.cpp:390:44: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
~~~~~~^~~~~~
../fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (domain->dimension == 2 && zflag == 1.0)
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
../fix_rigid.cpp:365:23: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
fflag[m-1][1] = yflag;
~~~~~~~~~~~~~~^~~~~~~
../fix_rigid.cpp:364:23: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
fflag[m-1][0] = xflag;
~~~~~~~~~~~~~~^~~~~~~
../fix_rigid.cpp:342:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (strcmp(arg[iarg],"force") == 0) {
^
../fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (custom_flag) delete [] molecule;
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_lj126.cpp
../reaxc_tool_box.cpp: In function 'void* smalloc(rc_bigint, const char*, MPI_Comm)':
../reaxc_tool_box.cpp:63:22: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'rc_bigint {aka long long int}' [-Wformat=]
n, name );
^
../reaxc_tool_box.cpp:71:22: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'rc_bigint {aka long long int}' [-Wformat=]
n, name );
^
../reaxc_tool_box.cpp: In function 'void* scalloc(rc_bigint, rc_bigint, const char*, MPI_Comm)':
../reaxc_tool_box.cpp:86:22: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'rc_bigint {aka long long int}' [-Wformat=]
n, name );
^
../reaxc_tool_box.cpp:93:25: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
name, size );
^
../reaxc_tool_box.cpp:101:27: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'rc_bigint {aka long long int}' [-Wformat=]
n*size, name );
~~~~~~ ^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_sphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_wolf_omp.cpp
../fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
../fix_rigid.cpp:1484:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
^
../fix_rigid.cpp:1479:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
^
../fix_rigid.cpp:1463:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
../fix_rigid.cpp:1407:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
~~~~^~~
../fix_rigid.cpp:1406:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
~~~~^~~
../fix_rigid.cpp:1406:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
~~~~^~~
../fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
../fix_rigid.cpp:1629:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
^
../fix_rigid.cpp:1616:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
../fix_rigid.cpp:1578:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
x1 = x[i][1] + ybox*yprd + zbox*yz;
~~~~^~~
../fix_rigid.cpp:1577:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
~~~~^~~
../fix_rigid.cpp:1577:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
~~~~^~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sdk_coul_long.cpp
../fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
../fix_rigid.cpp:2225:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
radone = lbonus[line[i]].length;
^
../fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
../fix_rigid.cpp:2298:13: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_born_coul_wolf_omp.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
../pair_born_coul_wolf_omp.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_wolf_omp.cpp:182:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
../pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_born_coul_wolf_omp.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
../pair_born_coul_wolf_omp.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_wolf_omp.cpp:182:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
../fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
../fix_rigid.cpp:2124:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (infile && inbody[ibody]) continue;
~~~~~~~~~~~~^
../fix_rigid.cpp:2105:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
^
../fix_rigid.cpp:2022:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
orient[i][0] = lbonus[line[i]].theta - theta_body;
^
../fix_rigid.cpp:2087:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nm_cut_coul_long_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_yukawa_colloid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ipi.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../msm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../xdr_compat.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna_hbond.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_halffull_newtoff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../memory.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_skip_size_off2on_oneside.cpp
../pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
../pair_oxdna_hbond.cpp:799:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sdk_coul_msm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_multi_3d_newton_tri.cpp
In file included from ../pair_lj_sdk_coul_msm_omp.cpp:25:0:
../lj_sdk_common.h:30:14: warning: 'int LAMMPS_NS::LJSDKParms::find_lj_type(const char*, const char* const*)' defined but not used [-Wunused-function]
static int find_lj_type(const char *label,
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newtoff_ghost.cpp
../msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
../msm.cpp:1640:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v5sum += v5_directn[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1639:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v4sum += v4_directn[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1638:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v3sum += v3_directn[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1637:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v2sum += v2_directn[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1636:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v1sum += v1_directn[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1635:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v0sum += v0_directn[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../thr_data.cpp
../npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
../npair_half_bin_newtoff_ghost.cpp:114:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_neb.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../domain_omp.cpp
../msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
../msm.cpp:1995:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v5sum += v5_direct_top[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1994:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v4sum += v4_direct_top[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1993:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v3sum += v3_direct_top[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1992:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v2sum += v2_direct_top[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1991:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v1sum += v1_direct_top[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../msm.cpp:1990:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
v0sum += v0_direct_top[k] * qtmp2;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_tune_kspace.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../minimize.cpp
../fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
../fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
~~~~~~~~~~~^~~~~~~~~~
../fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
../fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_long_omp.cpp
../fix_tune_kspace.cpp: In member function 'virtual void LAMMPS_NS::FixTuneKspace::init()':
../fix_tune_kspace.cpp:86:6: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
void FixTuneKspace::init()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:95:10: note: 'sprintf' output between 2 and 14 bytes into a destination of size 12
sprintf(old_acc_str,"%g",old_acc);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
../fix_tune_kspace.cpp: In member function 'void LAMMPS_NS::FixTuneKspace::store_old_kspace_settings()':
../fix_tune_kspace.cpp:198:6: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
void FixTuneKspace::store_old_kspace_settings()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:206:10: note: 'sprintf' output between 2 and 14 bytes into a destination of size 12
sprintf(old_acc_str,"%g",old_acc);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_long_coul_long.cpp
../fix_tune_kspace.cpp: In member function 'virtual void LAMMPS_NS::FixTuneKspace::pre_exchange()':
../fix_tune_kspace.cpp:107:6: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
void FixTuneKspace::pre_exchange()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:126:12: note: 'sprintf' output between 6 and 25 bytes into a destination of size 20
sprintf(new_pair_style,"%s/long",base_pair_style);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../fix_tune_kspace.cpp:107:6: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
void FixTuneKspace::pre_exchange()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:133:12: note: 'sprintf' output between 6 and 25 bytes into a destination of size 20
sprintf(new_pair_style,"%s/long",base_pair_style);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../fix_tune_kspace.cpp:107:6: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
void FixTuneKspace::pre_exchange()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:140:12: note: 'sprintf' output between 5 and 24 bytes into a destination of size 20
sprintf(new_pair_style,"%s/msm",base_pair_style);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../fix_tune_kspace.cpp:107:6: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
void FixTuneKspace::pre_exchange()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:150:12: note: 'sprintf' output between 6 and 25 bytes into a destination of size 20
sprintf(new_pair_style,"%s/long",base_pair_style);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../fix_tune_kspace.cpp:107:6: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
void FixTuneKspace::pre_exchange()
^~~~~~~~~~~~~
../fix_tune_kspace.cpp:155:14: note: 'sprintf' output between 5 and 24 bytes into a destination of size 20
sprintf(new_pair_style,"%s/msm",base_pair_style);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_harmonic_omp.cpp
../pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_coul_long_omp.cpp:193:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long_omp.cpp:197:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_long_omp.cpp:190:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_msst.cpp
../pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_coul_long_omp.cpp:193:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long_omp.cpp:197:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_omp.cpp:190:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reader.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../respa_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../read_restart.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../imbalance.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_class2.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ti_spring.cpp
../read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)':
../read_restart.cpp:628:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (strlen(&ep->d_name[nbegin]) < n) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nm_cut_coul_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_zero.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_wolf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_centro_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_dipole_chunk.cpp
../pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
../pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_wolf.cpp:487:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc-e_shift*r);
~~~~~~^~~~~~~~~~~
../pair_born_coul_wolf.cpp:482:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc-e_shift*r);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc-e_shift*r);
~~~~~~~^~
../pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
../pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_efield.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nm_cut_coul_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_class2.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_smooth_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_hexorder_atom.cpp
../pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_nm_cut_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_nm_cut_coul_long.cpp:560:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_nm_cut_coul_long.cpp:563:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_nm_cut_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_nm_cut_coul_long.cpp:570:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
~~~^~~~~~~~~~~~~~~~~~~~
../pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
../pair_nm_cut_coul_long.cpp:187:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
(mm[itype][jtype]*r0n[itype][jtype]*rninv -
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
../pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
../pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
../pair_lj_smooth_omp.cpp:153:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
../pair_lj_smooth_omp.cpp:149:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv -
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
lj4[itype][jtype]) - offset[itype][jtype];
~~~~~~~~~~~~~~~~~~
../pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
../pair_lj_smooth_omp.cpp:153:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
../pair_lj_smooth_omp.cpp:149:47: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv -
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_disp_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_halffull_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sdk_coul_msm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../domain.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_zbl_omp.cpp
In file included from ../pair_lj_sdk_coul_msm.cpp:37:0:
../lj_sdk_common.h:30:14: warning: 'int LAMMPS_NS::LJSDKParms::find_lj_type(const char*, const char* const*)' defined but not used [-Wunused-function]
static int find_lj_type(const char *label,
^~~~~~~~~~~~
../pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_zbl_omp.cpp:149:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(sw3i[jtype] + sw4i[jtype]*t);
../pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_zbl_omp.cpp:149:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(sw3i[jtype] + sw4i[jtype]*t);
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_class2_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_opt.cpp
../domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
../domain.cpp:857:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (onemols[imol]->bond_type[iatom][j] < 0) continue;
^
../domain.cpp:857:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (onemols[imol]->bond_type[iatom][j] < 0) continue;
^
../domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
../domain.cpp:758:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (onemols[imol]->bond_type[iatom][j] < 0) continue;
^
../domain.cpp:758:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (onemols[imol]->bond_type[iatom][j] < 0) continue;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_bocs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_enforce2d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../respa.cpp
../fix_bocs.cpp: In member function 'int LAMMPS_NS::FixBocs::read_F_table(char*, int)':
../fix_bocs.cpp:628:8: warning: unused variable 'separator' [-Wunused-variable]
char separator = ',';
^~~~~~~~~
../fix_bocs.cpp:632:10: warning: unused variable 'n1' [-Wunused-variable]
double n1, n2;
^~
../fix_bocs.cpp:632:14: warning: unused variable 'n2' [-Wunused-variable]
double n1, n2;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_mdpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_full_bin_3d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_event_displace.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_drude.cpp
../pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_cut.cpp:453:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
../pair_lj_cut_coul_cut.cpp:140:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_vcm_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_nsq_newtoff_ghost_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pe.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newtoff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_class2_coul_cut.cpp
../npair_half_nsq_newtoff_ghost_omp.cpp: In function '_ZN9LAMMPS_NS27NPairHalfNsqNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_nsq_newtoff_ghost_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~~
../npair_half_nsq_newtoff_ghost_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../imbalance_group.cpp
../npair_half_bin_newtoff_omp.cpp: In function '_ZN9LAMMPS_NS22NPairHalfBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_bin_newtoff_omp.cpp:116:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~~
../npair_half_bin_newtoff_omp.cpp:116:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_disp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../read_data.cpp
../pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
../pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
../pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_quadratic.cpp
../read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)':
../read_data.cpp:1966:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ((blank == strlen(line)) || (line[blank] == '#')) {
~~~~~~^~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_long_cs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lubricate_omp.cpp
../pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
../pair_coul_long_cs.cpp:169:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long_cs.cpp:169:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_long_cs.cpp:171:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long_cs.cpp:171:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../error.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_bond_partial.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_list.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_polymorphic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_mvv_tdpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_full_ghost_bin_2d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_mie_cut.cpp
../pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
../pair_polymorphic.cpp:200:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (emb > epsilon) {
^~
../pair_polymorphic.cpp:291:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_polymorphic.cpp:291:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_polymorphic.cpp:291:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dpd_omp.cpp
../pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
../pair_mie_cut.cpp:396:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair = factor_mie*forcemie*r2inv;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_mie_cut.cpp:399:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_dsf_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_sllod_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ttm.cpp
../pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
^~~~~
../pair_lj_cut_coul_dsf_omp.cpp:176:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_dsf_omp.cpp:182:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
../pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
^~~~~
../pair_lj_cut_coul_dsf_omp.cpp:176:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_dsf_omp.cpp:182:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_agni_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newtoff.cpp
../pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
../pair_agni_omp.cpp:161:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
fxtmp,fytmp,fztmp,
~~~~~~~~~~~~~~~~~~
delx,dely,delz,thr);
~~~~~~~~~~~~~~~~~~~
../pair_agni_omp.cpp:161:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_agni_omp.cpp:161:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
../npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
../npair_half_bin_newtoff.cpp:106:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ti.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_expand_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_peri_ves.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../remap_wrap.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_long_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_erotate_rigid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_press_berendsen.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_thylakoid_shared.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_oxdna2_fene.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_print.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lubricate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nh_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ttm_mod.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_long_soft_omp.cpp
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
../fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
../fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
../fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pressure_bocs.cpp
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
../fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
../fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
../fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
../fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_dsf.cpp
../compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
../compute_pressure_bocs.cpp:249:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
return correction;
^~~~~~~~~~
../compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
../compute_pressure_bocs.cpp:331:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
scalar = (temperature->dof * boltz * t +
~~~~~~~~~~~~~~~~~~~~~~~~~^~~
../compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
../compute_pressure_bocs.cpp:393:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
~~~~~~~~~~~^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_movie.cpp
../pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
../pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_lj_cut_coul_dsf.cpp:168:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
../pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_dsf.cpp:465:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
../pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_multi_2d_newton_tri.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_sllod.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_improper_template.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_meso_t_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_agni.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_hbond_dreiding_lj_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../comm_tiled.cpp
../pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
../pair_agni.cpp:223:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_agni.cpp:223:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_agni.cpp:223:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_zbl_omp.cpp
../pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
../pair_agni.cpp:463:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
} else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
^
../pair_agni.cpp:434:37: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
int numtrain = params[curparam].numtrain;
^
../pair_agni.cpp:379:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../force.cpp
../pair_tersoff_zbl_omp.cpp: In member function 'virtual void LAMMPS_NS::PairTersoffZBLOMP::read_file(char*)':
../pair_tersoff_zbl_omp.cpp:114:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../body_nparticle.cpp
../comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
../comm_tiled.cpp:1503:11: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
index += dir;
~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_eff.cpp
../comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
../comm_tiled.cpp:767:13: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,m,n,nlast,nsend,nrecv,ngroup,ncount,ncountall;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nve_small.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_charmm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../library.cpp
../library.cpp: In function 'void lammps_create_atoms(void*, int, LAMMPS_NS::tagint*, int*, double*, double*, LAMMPS_NS::imageint*, int)':
../library.cpp:1517:76: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
"invalid total atoms %ld %ld",lmp->atom->natoms,natoms_prev+n);
~~~~~~~~~~~~~~~~~ ^
../library.cpp:1517:76: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_bin_newton_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_dpd.cpp
../npair_half_respa_bin_newton_omp.cpp: In function '_ZN9LAMMPS_NS26NPairHalfRespaBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_respa_bin_newton_omp.cpp:193:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~~
../npair_half_respa_bin_newton_omp.cpp:193:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~
../npair_half_respa_bin_newton_omp.cpp:167:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
../npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
^~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
int *neighptr,*neighptr_inner,*neighptr_middle;
^~~~~~~~~~~~~~~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_bin_newton_omp.cpp:17:
../my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
errorflag = 2;
^~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:238:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:237:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_omp.cpp:236:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[i] = i;
~~~~~~~~~~~~~~~~^~~
../npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_mod_c_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nh.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_cut_soft_omp.cpp
../fix_rigid_nh.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNH::final_integrate()':
../fix_rigid_nh.cpp:594:7: warning: unused variable 'i' [-Wunused-variable]
int i,ibody;
^
../fix_rigid_nh.cpp:596:15: warning: unused variable 'xy' [-Wunused-variable]
double dtfm,xy,xz,yz;
^~
../fix_rigid_nh.cpp:596:18: warning: unused variable 'xz' [-Wunused-variable]
double dtfm,xy,xz,yz;
^~
../fix_rigid_nh.cpp:596:21: warning: unused variable 'yz' [-Wunused-variable]
double dtfm,xy,xz,yz;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_resquared_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_spring_self.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_fene_expand_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_hybrid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tip4p_long_omp.cpp
../bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
../bond_fene_expand_omp.cpp:147:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
~~~~~~~~~~~~~~~~~^~~~
../bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
../bond_fene_expand_omp.cpp:147:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
~~~~~~~~~~~~~~~~~^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_msm_omp.cpp
../pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
../pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
int multflag;
^~~~~~~~
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_hybrid.cpp
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_nsq_newtoff_omp.cpp
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_tip4p_long_omp.cpp:439:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_tip4p_long_omp.cpp:441:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_tip4p_long_omp.cpp:439:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_tip4p_long_omp.cpp:441:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_long_soft.cpp
../npair_half_nsq_newtoff_omp.cpp: In function '_ZN9LAMMPS_NS22NPairHalfNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_nsq_newtoff_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~~
../npair_half_nsq_newtoff_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
int i,j,n,itype,jtype,which,imol,iatom;
^~~~
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pressure.cpp
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
../pair_coul_long_soft.cpp:376:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_coul_long_soft.cpp:377:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../balance.cpp
../compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
../compute_pressure.cpp:197:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
scalar = (temperature->dof * boltz * t +
~~~~~~~~~~~~~~~~~~~~~~~~~^~~
../compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
../compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
~~~~~~~~~~~^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sw_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_bond.cpp
../dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
../dump.cpp:498:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->v = vhold;
~~~~~~~~^~~~~~~
../dump.cpp:497:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->x = xhold;
~~~~~~~~^~~~~~~
../dump.cpp:499:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->image = imagehold;
~~~~~~~~~~~~^~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_torus.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_zero.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_heat_flux.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nm_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_zero.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_srd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_sphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_shielded.cpp
../fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_wall_srd.cpp:67:24: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
wallwhich[nwall] = newwall;
~~~~~~~~~~~~~~~~~^~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_meso.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_zbl.cpp
../pair_tersoff_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairTersoffZBL::read_file(char*)':
../pair_tersoff_zbl.cpp:94:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_hybrid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_umbrella_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_basal_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_gyration.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_edpd_source.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_local.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_full_bin_2d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tip4p_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_bin_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_cut_soft.cpp
../npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
../npair_half_respa_bin_newton.cpp:195:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_bin_newton.cpp:176:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton.cpp:150:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_bin_newton.cpp:16:
../my_page.h:172:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ndatum += n;
~~~~~~~^~~~
../npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_bin_newton.cpp:220:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton.cpp:221:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_bin_newton.cpp:219:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[inum] = i;
~~~~~~~~~~~~~~~~~~~^~~
../pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
../pair_coul_cut_soft.cpp:364:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_harmonic_shift.cpp
../pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_nonbonded_omp.cpp
../pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_cut_omp.cpp:376:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_tip4p_cut_omp.cpp:372:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_ees.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nbin_standard.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../msm_cg.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tip4p_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_msm.cpp
../pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
../pair_tip4p_long.cpp:383:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_tip4p_long.cpp:383:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_tip4p_long.cpp:378:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_tip4p_long.cpp:377:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
../pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_peri.cpp
../pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmm_coul_msm.cpp:524:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:514:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*egamma;
~~~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
../pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:212:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:221:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_full_multi_2d.cpp
../pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
../pair_lj_charmm_coul_msm.cpp:388:64: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:415:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * fgamma;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:387:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = ptable[itable] + fraction*dptable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = vtable[itable] + fraction*dvtable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_nsq_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_multi_body_omp.cpp
../npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
../npair_half_nsq_newtoff.cpp:104:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dsmc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ke_atom_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_sdk_coul_long_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_dihedral.cpp
In file included from ../pair_lj_sdk_coul_long_omp.cpp:23:0:
../lj_sdk_common.h:30:14: warning: 'int LAMMPS_NS::LJSDKParms::find_lj_type(const char*, const char* const*)' defined but not used [-Wunused-function]
static int find_lj_type(const char *label,
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_fourier.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_smd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_vashishta.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_srd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../sna.cpp
../pair_vashishta.cpp: In member function 'void LAMMPS_NS::PairVashishta::read_file(char*)':
../pair_vashishta.cpp:387:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_diel_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_bond_local.cpp
../fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
../fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
c1 = tbonus[tri[i]].c1;
^
../fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
length = lbonus[line[i]].length;
^
../fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
../fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
../fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertia = tbonus[tri[i]].inertia;
^
../fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
biglist[k].theta = lbonus[line[i]].theta;
^
../fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
../fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
../fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
~~^~~~~~~~~~~
../compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
../compute_bond_local.cpp:315:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr[n] = engrot;
~~~~~~~^~~~~~~~
../compute_bond_local.cpp:312:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr[n] = engvib;
~~~~~~~^~~~~~~~
../compute_bond_local.cpp:318:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr[n] = engtrans;
~~~~~~~^~~~~~~~~~
../compute_bond_local.cpp:306:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr[n] = engpot;
~~~~~~~^~~~~~~~
../compute_bond_local.cpp:151:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
double inertia,omegasq;
^~~~~~~
../compute_bond_local.cpp:324:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr[n] = vvib;
~~~~~~~^~~~~~
../compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
btype = onemols[imol]->bond_type[iatom][i];
^
../compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
btype = onemols[imol]->bond_type[iatom][i];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_quadratic_omp.cpp
../fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
../fix_srd.cpp:2551:22: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
AtomVecTri::Bonus *tbonus;
^~~~~~
../fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
double length = lbonus[line[i]].length;
^
../fix_srd.cpp:2681:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
double *shape = ebonus[ellipsoid[i]].shape;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_group_group.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_spherical.cpp
../fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
../fix_srd.cpp:1550:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
xbcoll[2] = xbcollfirst[2];
~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_srd.cpp:1549:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
xbcoll[1] = xbcollfirst[1];
~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_srd.cpp:1548:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
xbcoll[0] = xbcollfirst[0];
~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_srd.cpp:1547:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
xscoll[2] = xscollfirst[2];
~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_srd.cpp:1546:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
xscoll[1] = xscollfirst[1];
~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_srd.cpp:1545:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
xscoll[0] = xscollfirst[0];
~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_srd.cpp:1551:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
norm[0] = normfirst[0];
~~~~~~~~^~~~~~~~~~~~~~
../fix_srd.cpp:1552:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
norm[1] = normfirst[1];
~~~~~~~~^~~~~~~~~~~~~~
../fix_srd.cpp:1559:9: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (type != WALL) noslip(v[i],v[j],x[j],big,-1,xscoll,norm,vsnew);
^~
../fix_srd.cpp:1560:20: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
else noslip(v[i],NULL,x[j],big,j,xscoll,norm,vsnew);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../fix_srd.cpp:1553:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
norm[2] = normfirst[2];
~~~~~~~~^~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_forces_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_dipole_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_class2.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_dynamic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tip4p_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_bin_newton_tri.cpp
../npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
../npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_bin_newton_tri.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newton_tri.cpp:157:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_bin_newton_tri.cpp:16:
../my_page.h:172:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ndatum += n;
~~~~~~~^~~~
../npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_bin_newton_tri.cpp:182:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newton_tri.cpp:183:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_bin_newton_tri.cpp:181:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[inum] = i;
~~~~~~~~~~~~~~~~~~~^~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_3d_newton.cpp
../pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
../pair_tip4p_cut.cpp:338:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_tip4p_cut.cpp:337:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_ilp_graphene_hbn.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_filter_corotate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../create_bonds.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_histo_weight.cpp
../create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
../create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
} else if (style == SANGLE) {
^~
../create_bonds.cpp:111:18: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (iarg+2 > narg) error->all(FLERR,"Illegal create_bonds command");
~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_block.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_ffield.cpp
../pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::read_file(char*)':
../pair_ilp_graphene_hbn.cpp:897:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_bin_ghost_omp.cpp
../region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
../region_block.cpp:336:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
add_contact(0,x,xp,yp,zp);
~~~~~~~~~~~^~~~~~~~~~~~~~
../region_block.cpp:336:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
../region_block.cpp:336:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvk.cpp
../npair_full_bin_ghost_omp.cpp: In function '_ZN9LAMMPS_NS20NPairFullBinGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_full_bin_ghost_omp.cpp:118:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_full_bin_ghost_omp.cpp:118:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~~
../npair_full_bin_ghost_omp.cpp:118:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_stagger.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_profile.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_drag.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_erotate_sphere_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_traj.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_nsq_newton_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ke_atom.cpp
../reaxc_traj.cpp: In function 'int Write_Header(reax_system*, control_params*, output_controls*, mpi_datatypes*)':
../reaxc_traj.cpp:104:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
sprintf( out_control->line, BIGINT_LINE, "number_of_atoms:", system->bigN );
~~~~~~~~~~~~ ^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck6d_coul_gauss_long.cpp
../npair_half_respa_nsq_newton_omp.cpp: In function '_ZN9LAMMPS_NS26NPairHalfRespaNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:162:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
^~~~~
../npair_half_respa_nsq_newton_omp.cpp:162:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
^~~~
../npair_half_respa_nsq_newton_omp.cpp:180:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
../npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
^~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
int *neighptr,*neighptr_inner,*neighptr_middle;
^~~~~~~~~~~~~~~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_nsq_newton_omp.cpp:17:
../my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
errorflag = 2;
^~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:205:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:204:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newton_omp.cpp:203:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[i] = i;
~~~~~~~~~~~~~~~~^~~
../npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~
../reaxc_traj.cpp: In function 'int Init_Traj(reax_system*, control_params*, output_controls*, mpi_datatypes*, char*)':
../reaxc_traj.cpp:314:5: warning: '.trj' directive writing 4 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
int Init_Traj( reax_system *system, control_params *control,
^~~~~~~~~
../reaxc_traj.cpp:326:10: note: 'sprintf' output between 5 and 1028 bytes into a destination of size 1024
sprintf( fname, "%s.trj", control->sim_name );
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_sllod_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_umbrella.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_forces.cpp
../pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
../pair_buck6d_coul_gauss_long.cpp:88:30: warning: unused variable 't' [-Wunused-variable]
double prefactor,erfa,expa,t,arg,falpha;
^
../pair_buck6d_coul_gauss_long.cpp:214:72: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
../pair_buck6d_coul_gauss_long.cpp:214:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck6d_coul_gauss_long.cpp:214:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_buck6d_coul_gauss_long.cpp:208:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = ebuck6d - offset[itype][jtype];
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_dipole.cpp
../pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
../pair_buck6d_coul_gauss_long.cpp:615:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_buck6d_coul_gauss_long.cpp:615:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck6d_coul_gauss_long.cpp:615:66: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
../pair_buck6d_coul_gauss_long.cpp:609:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck6d = ebuck6d - offset[itype][jtype];
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_partial.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_extep.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_nsq_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_hydrogen_bonds.cpp
../pair_extep.cpp: In member function 'void LAMMPS_NS::PairExTeP::spline_init()':
../pair_extep.cpp:1078:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for ( size_t iel=0; iel<atom->ntypes; iel++) {
~~~^~~~~~~~~~~~~
../pair_extep.cpp:1079:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for ( size_t jel=0; jel<atom->ntypes; jel++) {
~~~^~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_atomonly_newton.cpp
../npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
../npair_half_nsq_newton.cpp:121:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
../pair_extep.cpp: In member function 'virtual void LAMMPS_NS::PairExTeP::read_file(char*)':
../pair_extep.cpp:608:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_orientorder_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_class2_coul_long_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_asphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna_coaxstk.cpp
../pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_class2_coul_long_omp.cpp:173:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_class2_coul_long_omp.cpp:177:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long_omp.cpp:177:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
../pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_class2_coul_long_omp.cpp:177:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long_omp.cpp:177:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_cfg.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_uef.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_omp.cpp
../pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
../pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_init_md_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_slice.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_dipole.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../python.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_mvv_edpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_omega_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_multi_lucy_rx.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../info.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newton_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_edip_multi.cpp
../pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
../pair_multi_lucy_rx.cpp:1016:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2 = nMolecules2;
~~~~~~~~~~~^~~~~~~~~~~~~
../pair_multi_lucy_rx.cpp:1015:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2old = nMoleculesOld2;
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
../pair_multi_lucy_rx.cpp:1011:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2 = fraction2;
~~~~~~~~~~~^~~~~~~~~~~
../pair_multi_lucy_rx.cpp:1010:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
mixWtSite2old = fractionOld2;
~~~~~~~~~~~~~~^~~~~~~~~~~~~~
../npair_half_bin_newton_omp.cpp: In function '_ZN9LAMMPS_NS21NPairHalfBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_bin_newton_omp.cpp:149:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_bin_newton_omp.cpp:149:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~~
../npair_half_bin_newton_omp.cpp:149:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_tri.cpp
../info.cpp: In function 'void print_columns(FILE*, std::vector<std::__cxx11::basic_string<char> >&)':
../info.cpp:1102:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < styles.size(); ++i) {
~~^~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_gromos.cpp
../pair_edip_multi.cpp: In member function 'void LAMMPS_NS::PairEDIPMulti::read_file(char*)':
../pair_edip_multi.cpp:662:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_nsq_newton_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_npt_omp.cpp
../npair_half_nsq_newton_omp.cpp: In function '_ZN9LAMMPS_NS21NPairHalfNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_nsq_newton_omp.cpp:130:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
^~~~~
../npair_half_nsq_newton_omp.cpp:130:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_cdeam_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_thermal_conductivity.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_tfmc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_srp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lennard_mdf.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gran_hooke_omp.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_distance.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_multi_2d_newtoff.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_gld.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_quartic_omp.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_recenter.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nm_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_init_md.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_bond_swap.cpp
../pair_cdeam_omp.cpp: In member function 'void LAMMPS_NS::PairCDEAMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
../pair_cdeam_omp.cpp:483:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nb3b_harmonic_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_gcmc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_mvv_dpd.cpp
../fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
../fix_bond_swap.cpp:498:39: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (jlast >= 0) jlasttag = tag[jlast];
^
../fix_bond_swap.cpp:496:39: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (jprev >= 0) jprevtag = tag[jprev];
^
../fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
^~~~~
../fix_bond_swap.cpp:493:39: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (ilast >= 0) ilasttag = tag[ilast];
^
../fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (iprev >= 0) iprevtag = tag[iprev];
^
../fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
^~~~~
../fix_bond_swap.cpp:203:64: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
int ibondtype,jbondtype,iangletype,inextangletype,jangletype,jnextangletype;
^~~~~~~~~~~~~~
../fix_bond_swap.cpp:203:53: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
int ibondtype,jbondtype,iangletype,inextangletype,jangletype,jnextangletype;
^~~~~~~~~~
../fix_bond_swap.cpp:203:38: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
int ibondtype,jbondtype,iangletype,inextangletype,jangletype,jnextangletype;
^~~~~~~~~~~~~~
../fix_bond_swap.cpp:203:27: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
int ibondtype,jbondtype,iangletype,inextangletype,jangletype,jnextangletype;
^~~~~~~~~~
../fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
for (jbond = 0; jbond < num_bond[j]; jbond++)
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_lj1043.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pair.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_tri.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_npt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_morse_omp.cpp
../fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
../fix_gcmc.cpp:2288:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (imolecule == molecule[j]) continue;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_cdeam.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../output.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_class2_coul_cut_omp.cpp
../pair_cdeam.cpp: In member function 'virtual void LAMMPS_NS::PairCDEAM::compute(int, int)':
../pair_cdeam.cpp:366:54: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair += D_i * rhojp * t1;
~~~~^~~~~~~
../pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_class2_coul_cut_omp.cpp:161:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_cut_omp.cpp:161:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
../pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_class2_coul_cut_omp.cpp:161:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_cut_omp.cpp:161:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_2d_newton_tri.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_smooth_linear_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gran_hooke.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../neigh_request.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_indent.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_gran_region.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gran_hertz_history_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_opt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_table_omp.cpp
../pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_table_omp.cpp:190:47: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
~~~^~
../pair_table_omp.cpp:189:23: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
../pair_table_omp.cpp:187:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = tb->e[itable] + fraction*tb->de[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_long_coul_long_opt.cpp
../pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_table_omp.cpp:190:47: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
~~~^~
../pair_table_omp.cpp:189:23: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
../pair_table_omp.cpp:187:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = tb->e[itable] + fraction*tb->de[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lubricate_poly_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_table_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna2_excv.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lubricate_poly.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_mod_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nb3b_harmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_exp6_rx.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../finish.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min_fire.cpp
../pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
../pair_exp6_rx.cpp:1224:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
^
../pair_exp6_rx.cpp:1238:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
^
../pair_exp6_rx.cpp:1217:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
^
../pair_exp6_rx.cpp:1231:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
^
../pair_exp6_rx.cpp:1224:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
^~
../pair_exp6_rx.cpp:1238:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
^~
../pair_exp6_rx.cpp:1217:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
^~
../pair_exp6_rx.cpp:1231:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
^~
../finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
../finish.cpp:776:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
tmp = MAX(nneigh,nneighfull);
../finish.cpp:776:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_gravity.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ewald_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_quartic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_opls.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_morse.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_saed.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_shake.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../molecule.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../random_park.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gran_hooke_history_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_smooth_linear.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_long_opt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_saed_vtk.cpp
../pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
../pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_coul_long_opt.cpp:185:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
../pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_coul_long_opt.cpp:185:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
../pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_coul_long_opt.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long_opt.cpp:185:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_long_opt.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
../pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_coul_long_opt.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long_opt.cpp:185:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_opt.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gran_hertz_history.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_bond_orders_omp.cpp
../pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
../pair_lj_cut.cpp:388:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair = factor_lj*forcelj*r2inv;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut.cpp:391:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eim.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_table.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_table.cpp
../pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
../pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
~~~~~~^~~
../pair_table.cpp:1041:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
phi = a * tb->e[itable] + b * tb->e[itable+1] +
~~^~~~~~~~~~~~~~~
../pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
phi = tb->e[itable] + fraction*tb->de[itable];
~~~~~~~~^~~~~~~~~~~~~~~
../pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
../pair_table.cpp:177:47: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
~~~^~
../pair_table.cpp:176:23: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
~~^~~~~~~~~~~~~~~
../pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = tb->e[itable] + fraction*tb->de[itable];
~~~~~~~~^~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_fene_expand.cpp
../pair_eim.cpp: In member function 'void LAMMPS_NS::PairEIM::read_file(char*)':
../pair_eim.cpp:501:22: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (!grabsingle(fptr,i))
~~~~~~~~~~^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_halffull_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pe_tally.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../delete_bonds.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_manifold_rattle.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_mod.cpp
../pair_tersoff_mod.cpp: In member function 'virtual void LAMMPS_NS::PairTersoffMOD::read_file(char*)':
../pair_tersoff_mod.cpp:77:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_fragment_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_reaxc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_line_lj.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nvt_small.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_gravity_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_reaxc_omp.cpp
../pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
../pair_line_lj.cpp:307:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_eos_table.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_ellipsoid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ewald.cpp
../pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
../pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
data->timing.nbrs = t_end - t_start;
~~~~~~^~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sw.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_multi_body.cpp
../pair_sw.cpp: In member function 'void LAMMPS_NS::PairSW::read_file(char*)':
../pair_sw.cpp:381:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_peri_pmb_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_asphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gran_hooke_history.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_shift_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_tmd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_msd_nongauss.cpp
../fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
../fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (imageflag)
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dpd_tstat_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_shift_exp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_bond_template.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_srp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_point.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lcbop.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_imd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eff_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_reaxc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_comb_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_long_soft.cpp
../pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
../pair_reaxc.cpp:524:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
data->timing.nbrs = t_end - t_start;
~~~~~~^~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_property_local.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper.cpp
../pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmm_coul_long_soft.cpp:984:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj);
~~~^~~~~~
../pair_lj_charmm_coul_long_soft.cpp:976:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long_soft.cpp:977:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
../pair_lj_charmm_coul_long_soft.cpp:530:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long_soft.cpp:531:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = eprefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long_soft.cpp:552:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~~
../pair_lj_charmm_coul_long_soft.cpp:551:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_charmm_coul_long_soft.cpp:551:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
../pair_lj_charmm_coul_long_soft.cpp:189:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj);
~~~^~~~~~
../pair_lj_charmm_coul_long_soft.cpp:182:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long_soft.cpp:183:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_periodic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_nsq_newtoff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_table_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_lookup.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_airebo_morse_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ke.cpp
../reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
../reaxc_lookup.cpp:41:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(i = 1; i < n; i++){
~~^~~
../reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(const double*, const double*, cubic_spline_coef*, unsigned int, MPI_Comm)':
../reaxc_lookup.cpp:69:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 2; i < n-1; ++i )
~~^~~~~
../reaxc_lookup.cpp:73:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n-1; ++i )
~~^~~~~
../reaxc_lookup.cpp:77:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n-2; ++i )
~~^~~~~
../reaxc_lookup.cpp:81:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n-1; ++i )
~~^~~~~
../reaxc_lookup.cpp:88:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n; ++i ){
~~^~~
../reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(const double*, const double*, double, double, cubic_spline_coef*, unsigned int, MPI_Comm)':
../reaxc_lookup.cpp:120:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n; ++i )
~~^~~
../reaxc_lookup.cpp:124:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n; ++i )
~~^~~
../reaxc_lookup.cpp:128:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 0; i < n-1; ++i )
~~^~~~~
../reaxc_lookup.cpp:133:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n-1; ++i )
~~^~~~~
../reaxc_lookup.cpp:138:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( i = 1; i < n; ++i ){
~~^~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_thole_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_full_multi_3d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_atom_swap.cpp
../pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
../pair_lj_cut_thole_long.cpp:364:7: warning: unused variable 'irequest' [-Wunused-variable]
int irequest = neighbor->request(this,instance_me);
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_bin_newton_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dpd_tstat.cpp
../pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
../pair_lj_cut_thole_long.cpp:230:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (drudetype[type[i]] != NOPOL_TYPE &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long.cpp:231:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long.cpp:194:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcoul = qqrd2e * dqi * dqj / r;
~~~~~~~^~~~~
../pair_lj_cut_thole_long.cpp:231:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long.cpp:223:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long.cpp:228:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_thole_long.cpp:225:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long.cpp:236:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_thole_long.cpp:226:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = qi*qj * table;
~~^~~
../pair_lj_cut_thole_long.cpp:225:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_thole_long.cpp:672:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_thole_long.cpp:665:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
di_closest != j)
~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long.cpp:667:27: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul += factor_e * dcoul;
~~~~~~~~~^~~~~~~
../pair_lj_cut_thole_long.cpp:667:27: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_thole_long.cpp:661:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_cut_thole_long.cpp:661:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_thole_long.cpp:664:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_thole_long.cpp:659:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_pour.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_fene_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_multi_newtoff_omp.cpp
../bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
../bond_fene_omp.cpp:143:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
~~~~~~~~~~~~~~~~~^~~~
../bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
../bond_fene_omp.cpp:143:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
~~~~~~~~~~~~~~~~~^~~~
../fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
../fix_pour.cpp:677:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
int ninserted_mols = ninserted_atoms / natom;
^~~~~~~~~~~~~~
../fix_pour.cpp:693:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
^
../fix_pour.cpp:651:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
../fix_pour.cpp:500:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
coords[0][3] = radtmp;
~~~~~~~~~~~~~^~~~~~~~
../npair_half_multi_newtoff_omp.cpp: In function '_ZN9LAMMPS_NS24NPairHalfMultiNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_multi_newtoff_omp.cpp:123:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~~
../npair_half_multi_newtoff_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_edpd_temp_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_angle.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_funcs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pe_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_zbl.cpp
../pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_cut_omp.cpp:159:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
../pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_skip_size_off2on.cpp
../pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_cut_omp.cpp:159:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min_hftn.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_asphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_sphere.cpp
../pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
../pair_zbl.cpp:142:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(sw3[itype][jtype] + sw4[itype][jtype]*t);
~~~~~~~~~~~~~~~~~^~
../pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
../pair_zbl.cpp:289:16: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
eswitch = t*t*t *
~^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_region.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_comb.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fft3d_wrap.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_edpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_sphere.cpp
../fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
../fix_qeq_comb.cpp:164:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,ii,iloop,loopmax,inum,*ilist;
^~~~~
../fix_qeq_comb.cpp:164:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,ii,iloop,loopmax,inum,*ilist;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna_excv.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_long_coul_long.cpp
../pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
../pair_oxdna_excv.cpp:576:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_respa.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_delta_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tersoff_table.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_cmap.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_msm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_long_tip4p_long_omp.cpp
../pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_coul_msm_omp.cpp:171:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_msm_omp.cpp:173:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_tersoff_table.cpp: In member function 'void LAMMPS_NS::PairTersoffTable::read_file(char*)':
../pair_tersoff_table.cpp:863:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_coul_msm_omp.cpp:171:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_msm_omp.cpp:173:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pressure_grem.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_msm_omp.cpp
../fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)':
../fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized]
return angle;
^~~~~
../compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
../compute_pressure_grem.cpp:89:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
scalar = (temperature->dof * boltz * t +
~~~~~~~~~~~~~~~~~~~~~~~~~^~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_airebo_omp.cpp
../pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_buck_coul_msm_omp.cpp:167:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_buck_coul_msm_omp.cpp:170:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_msm_omp.cpp:170:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_bin_newton.cpp
../pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_buck_coul_msm_omp.cpp:166:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_buck_coul_msm_omp.cpp:170:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_msm_omp.cpp:170:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_wolf_cs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_fep.cpp
../pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
../pair_born_coul_wolf_cs.cpp:150:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~
../pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
../pair_airebo_omp.cpp:1001:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_born_coul_wolf_cs.cpp:147:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_wolf_cs.cpp:151:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_fene.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_dsf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../imbalance_time.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newton_tri_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp.cpp
../npair_half_bin_newton_tri_omp.cpp: In function '_ZN9LAMMPS_NS24NPairHalfBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_bin_newton_tri_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~~
../npair_half_bin_newton_tri_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tdpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sph_taitwater_morris.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_long_cs.cpp
../pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
../pair_airebo_omp.cpp:571:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair = dC*dwij / rij;
~~^~~~~
../pair_airebo_omp.cpp:615:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
~~~~~~~~~~~~^~~~~~
../pair_airebo_omp.cpp:610:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
~~~~~~~~~~~~~^~~~~
../pair_airebo_omp.cpp:610:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
~~~~~~~^~~~~~
../pair_airebo_omp.cpp:615:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
~~~~~~~^~~~~
../pair_airebo_omp.cpp:586:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkjS / rkjS;
~~~~~~~^~~~~~
../pair_airebo_omp.cpp:582:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair1 = dC*dwikS*wkjS / rikS;
~~~~~~~~^~~~~
../pair_airebo_omp.cpp:582:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair1 = dC*dwikS*wkjS / rikS;
~~^~~~~~
../pair_airebo_omp.cpp:586:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkjS / rkjS;
~~^~~~~
../pair_airebo_omp.cpp:615:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_airebo_omp.cpp:610:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_airebo_omp.cpp:586:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkjS / rkjS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
../pair_airebo_omp.cpp:582:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair1 = dC*dwikS*wkjS / rikS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
../pair_airebo_omp.cpp:641:25: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_airebo_omp.cpp:641:25: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_multi_newtoff.cpp
../pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
../pair_lj_cut_coul_long_cs.cpp:542:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
~~~~~~^~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_cs.cpp:519:64: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long_cs.cpp:542:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_cut_coul_long_cs.cpp:542:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_cut_coul_long_cs.cpp:548:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = ptable[itable] + fraction*dptable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_cs.cpp:545:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = vtable[itable] + fraction*dvtable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_table_omp.cpp
../npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
../npair_half_multi_newtoff.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
../pair_lj_cut_coul_long_cs.cpp:184:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_cs.cpp:189:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long_cs.cpp:193:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_long_cs.cpp:186:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_cs.cpp:186:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_sdk_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../delete_atoms.cpp
In file included from ../angle_sdk_omp.cpp:28:0:
../lj_sdk_common.h:30:14: warning: 'int LAMMPS_NS::LJSDKParms::find_lj_type(const char*, const char* const*)' defined but not used [-Wunused-function]
static int find_lj_type(const char *label,
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_event_prd.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
../pair_lj_long_tip4p_long_omp.cpp:1337:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
~~~~~~~~~^~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1333:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
~~~~~~~~~^~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1306:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
~~~~~~~~~^~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1302:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../temper_npt.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
../pair_lj_long_tip4p_long_omp.cpp:1599:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
~~~~~~~~~^~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1595:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
~~~~~~~~~^~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1568:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
~~~~~~~~~^~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1564:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_quartic_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_asphere.cpp
../temper_npt.cpp: In member function 'void LAMMPS_NS::TemperNPT::command(int, char**)':
../temper_npt.cpp:292:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
me_universe,partner,swap,my_set_temp,partner_set_temp,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_cut_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_body_local.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_dens_final.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_buck_coul_cut_omp.cpp:157:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_buck_coul_cut_omp.cpp:157:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_cosine_shift_exp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_setup_global.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../prd.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_adapt_fep.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_rebo_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../temper.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_delta.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_dt_reset.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../comm_brick.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_airebo.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_snap.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
../comm_brick.cpp:715:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
^~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_setup_done.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
../pair_airebo.cpp:1244:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_snap.cpp: In function '_ZN9LAMMPS_NS8PairSNAP17compute_optimizedEii._omp_fn.0':
../pair_snap.cpp:478:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
int ielem;
^~~~~
../pair_snap.cpp:523:12: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
double starttime, endtime;
^~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
../meam_setup_done.cpp:447:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
rhobar2 = rho02 / rho_bkgd2 * G2;
~~~~~~^~~~~~~~~~~
../meam_setup_done.cpp:446:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
rhobar1 = rho01 / rho_bkgd1 * G1;
~~~~~~^~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::read_files(char*, char*)':
../pair_snap.cpp:1768:11: warning: 'fpparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fpparam);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_snap.cpp:1606:11: warning: 'fpcoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fpcoeff);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_colloid.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_vacf.cpp
../pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
../pair_airebo.cpp:4025:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j > 0) df[1] += c * ((double) j) * xn * yn1;
~~~~~~~~~~~~~~~~~~~~~~^~~~~
../pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
../pair_airebo.cpp:4065:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (k > 0) df[2] += c * kr * xn * yn * zn1;
~~~~~~~~~~~~~~~~~^~~~~
../pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
../pair_airebo.cpp:3286:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
return piRC;
^~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../citeme.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_setup_param.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gauss_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_morse_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../write_data.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../body.cpp
../pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
../pair_airebo.cpp:814:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair = dC*dwij / rij;
~~^~~~~
../pair_airebo.cpp:858:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
~~~~~~~~~~~~^~~~~~
../pair_airebo.cpp:853:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
~~~~~~~~~~~~~^~~~~
../pair_airebo.cpp:853:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
~~~~~~~^~~~~~
../pair_airebo.cpp:858:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
~~~~~~~^~~~~
../pair_airebo.cpp:829:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkjS / rkjS;
~~~~~~~^~~~~~
../pair_airebo.cpp:825:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair1 = dC*dwikS*wkjS / rikS;
~~~~~~~~^~~~~
../pair_airebo.cpp:825:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair1 = dC*dwikS*wkjS / rikS;
~~^~~~~~
../pair_airebo.cpp:829:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkjS / rkjS;
~~^~~~~
../pair_airebo.cpp:858:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_airebo.cpp:853:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_airebo.cpp:829:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair2 = dC*wikS*dwkjS / rkjS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
../pair_airebo.cpp:825:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair1 = dC*dwikS*wkjS / rikS;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
../pair_airebo.cpp:884:21: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_airebo.cpp:884:21: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_class2_coul_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_meam_sw_spline.cpp
../pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_lj_class2_coul_long.cpp:538:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long.cpp:538:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_class2_coul_long.cpp:531:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long.cpp:534:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_class2_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
../pair_lj_class2_coul_long.cpp:177:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_class2_coul_long.cpp:185:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long.cpp:185:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_class2_coul_long.cpp:179:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_class2_coul_long.cpp:179:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_store_force.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_nsq_newtoff_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_sphere_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../npair_half_respa_nsq_newtoff_omp.cpp: In function '_ZN9LAMMPS_NS27NPairHalfRespaNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:144:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
^~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:144:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
^~~~
../npair_half_respa_nsq_newtoff_omp.cpp:161:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
../npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
^~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
int *neighptr,*neighptr_inner,*neighptr_middle;
^~~~~~~~~~~~~~~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_nsq_newtoff_omp.cpp:17:
../my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
errorflag = 2;
^~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:186:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:185:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newtoff_omp.cpp:184:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[i] = i;
~~~~~~~~~~~~~~~~^~~
../npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here
int *ilist_middle,*numneigh_middle,**firstneigh_middle;
^~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_long_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_langevin_drude.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_disp_tip4p_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_long_soft_omp.cpp:182:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_lj_cut_coul_long_soft_omp.cpp:175:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
^~~~~~~~~
../pair_lj_cut_coul_long_soft_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_long_soft_omp.cpp:182:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~~~~^~~~~~~
../pair_lj_cut_coul_long_soft_omp.cpp:175:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
^~~~~~~~~
../pair_lj_cut_coul_long_soft_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../universe.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rx.cpp
../fix_rx.cpp:761:3: warning: multi-line comment [-Wcomment]
//#pragma omp parallel \
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)':
../universe.cpp:190:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
} else if (strlen(str) == len-1) {
~~~~~~~~~~~~^~~~~~~~
../universe.cpp: In constructor 'LAMMPS_NS::Universe::Universe(LAMMPS_NS::LAMMPS*, MPI_Comm)':
../universe.cpp:35:1: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
Universe::Universe(LAMMPS *lmp, MPI_Comm communicator) : Pointers(lmp)
^~~~~~~~
../universe.cpp:273:10: note: 'sprintf' output between 9 and 11 bytes into a destination of size 10
sprintf(ver,"%04d%02d%02d", year % 10000, month, day % 100);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
../universe.cpp:149:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
MPI_Comm_split(uorig,0,key,&uworld);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_bond.cpp
In file included from ../fix.h:17:0,
from ../fix_rx.h:23,
from ../fix_rx.cpp:19:
../fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
../pointers.h:35:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
#define MAX(A,B) ((A) > (B) ? (A) : (B))
~~~~^~~~~
../fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
^~~
../fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
../fix_rx.cpp:549:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (sparseKinetics_inu[i][idx] >= nu_bin.size())
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_rx.cpp:567:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (sparseKinetics_inu[i][idx] >= nu_bin.size())
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
../fix_rx.cpp:583:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 1; i < nu_bin.size(); ++i)
~~^~~~~~~~~~~~~~~
../fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::pre_force(int)':
../fix_rx.cpp:732:13: warning: unused variable 'timer_start' [-Wunused-variable]
TimerType timer_start = getTimeStamp();
^~~~~~~~~~~
../fix_rx.cpp:811:13: warning: unused variable 'timer_stop' [-Wunused-variable]
TimerType timer_stop = getTimeStamp();
^~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_property_chunk.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newton_ssa.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../special.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dpd_fdt_energy.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../npair_half_bin_newton_ssa.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
../npair_half_bin_newton_ssa.cpp:207:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newton_ssa.cpp:207:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton_ssa.cpp:207:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
../pair_dpd_fdt_energy.cpp:409:7: warning: unused variable 'irequest' [-Wunused-variable]
int irequest = neighbor->request(this,instance_me);
^~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long_omp.cpp:1077:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_dpd_atom.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_copy.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_fire.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_minimize.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ke_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_peri_eps.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_quartic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gauss.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_cut_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_morse.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_oneway.cpp
../pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_cut_soft_omp.cpp:160:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_lj_cut_coul_cut_soft_omp.cpp:156:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
^~~~~
../pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_cut_soft_omp.cpp:160:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~~~~^~~~~~~
../pair_lj_cut_coul_cut_soft_omp.cpp:156:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../change_box.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_3d_newton_ssa.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_ke_rigid.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_prism.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../min_quickmin.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_long_soft.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_squared_omp.cpp
../region_prism.cpp: In member function 'void LAMMPS_NS::RegPrism::find_nearest(double*, double&, double&, double&)':
../region_prism.cpp:412:6: warning: '*((void*)& nearest +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
zp = nearest[2];
~~~^~~~~~~~~~~~
../region_prism.cpp:410:6: warning: 'nearest' may be used uninitialized in this function [-Wmaybe-uninitialized]
xp = nearest[0];
~~~^~~~~~~~~~~~
../region_prism.cpp:411:6: warning: '*((void*)& nearest +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
yp = nearest[1];
~~~^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_cut_soft.cpp
../pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_long_soft.cpp:930:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_lj_cut_coul_long_soft.cpp:922:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_soft.cpp:923:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
../pair_lj_cut_coul_long_soft.cpp:495:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_soft.cpp:496:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = eprefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_soft.cpp:512:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~~
../pair_lj_cut_coul_long_soft.cpp:511:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_cut_coul_long_soft.cpp:511:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
../pair_lj_cut_coul_long_soft.cpp:177:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_lj_cut_coul_long_soft.cpp:170:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long_soft.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_cut_soft.cpp:498:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_lj_cut_coul_cut_soft.cpp:493:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
../pair_lj_cut_coul_cut_soft.cpp:149:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
~~~^~~~~~
../pair_lj_cut_coul_cut_soft.cpp:145:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_mdpd_rhosum.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_class2.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_nsq_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_long_opt.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
../npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_meam_spline_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../read_dump.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_region_eff.cpp
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2][0] += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_tip4p_long_opt.cpp:435:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../run.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_tip4p_long_opt.cpp:435:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sph_lj.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
../run.cpp:173:35: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (stopflag) update->endstep = stop;
~~~~~~~~~~~~~~~~^~~~~~
../run.cpp:171:38: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (startflag) update->beginstep = start;
~~~~~~~~~~~~~~~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_long.cpp
../pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fHx;
../pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2][0] += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_harmonic_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_balance.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmm_coul_long.cpp:974:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:964:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
../pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
~~~~~~^~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:522:64: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = ptable[itable] + fraction*dptable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = vtable[itable] + fraction*dvtable[itable];
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
../pair_lj_charmm_coul_long.cpp:197:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:206:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_neigh_history_omp.cpp
../fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
../fix_balance.cpp:291:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_deposit.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_gran_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_heat.cpp
../fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
../fix_deposit.cpp:560:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
fixshake->set_molecule(nlocalprev,maxtag_all,imol,coord,vnew,quat);
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_force.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_limit.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_harmonic_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_small_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_eff.cpp
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
../fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_long.cpp
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
../fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
../fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_cut_omp.cpp
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
../fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
../fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
../fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
../fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
../fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
../fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
../fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_meso_e_atom.cpp
../pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
../pair_lj_cut_tip4p_long.cpp:415:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long.cpp:415:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long.cpp:410:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_lj_cut_tip4p_long.cpp:409:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
../pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_addtorque.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_squared.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_aveforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_viscosity.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_com_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_multi_3d_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_table.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna2_stk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gayberne.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gw.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_gw.cpp: In member function 'virtual void LAMMPS_NS::PairGW::read_file(char*)':
../pair_gw.cpp:398:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_aggregate_atom.cpp
../pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
../pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
~~~~~^~~~~~~~~
../pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
~~~~~^~~~~~~~~
../pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
~~~~~^~~~~~~~~
../pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
~~~~~^~~~~~~~
../pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
~~~~~^~~~~~~~
../pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
~~~~~^~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
../pair_gayberne.cpp:220:26: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (eflag) evdwl = factor_lj*one_eng;
~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_harmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_neigh_history.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newton.cpp
In file included from ../fix_neigh_history.cpp:17:0:
../fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder]
double **valuepartner; // values for the partners
^~~~~~~~~~~~
../fix_neigh_history.h:34:15: warning: 'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder]
class Pair *pair; // ptr to pair style that uses neighbor history
^~~~
../fix_neigh_history.cpp:36:1: warning: when initialized here [-Wreorder]
FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) :
^~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_comb_omp.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
../npair_half_bin_newton.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_gran.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_peri_pmb.cpp
../fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)':
../fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable]
double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv;
^~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_bond_break.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_harmonic.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_small.cpp
../pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
../pair_lj_cut_tip4p_cut.cpp:378:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_lj_cut_tip4p_cut.cpp:377:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_long.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_alloy_opt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna2_dh.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::init()':
../fix_rigid_small.cpp:572:78: warning: format '%d' expects argument of type 'int', but argument 3 has type 'char*' [-Wformat=]
sprintf(str,"Fix %d alters forces after fix rigid",modify->fix[i]->id);
~~~~~~~~~~~~~~~~~~^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_long.cpp:934:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long.cpp:924:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
../pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
~~~~~~^~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long.cpp:514:64: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = ptable[itable] + fraction*dptable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = vtable[itable] + fraction*dvtable[itable];
^
../pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
../pair_oxdna2_dh.cpp:372:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
../pair_lj_cut_coul_long.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_long.cpp:192:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_map.cpp
../fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
../fix_rigid_small.cpp:2702:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (me == 0) fclose(fp);
~~~~~~^~~~
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
../fix_rigid_small.cpp:1364:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
^
../fix_rigid_small.cpp:1359:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
lbonus[line[i]].theta = theta;
^
../fix_rigid_small.cpp:1344:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../irregular.cpp
../fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
../fix_rigid_small.cpp:1502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
^
../fix_rigid_small.cpp:1489:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = iH2;
../pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_com.cpp
../fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
../fix_rigid_small.cpp:2422:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
radone = lbonus[line[i]].length;
^
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../timer.cpp
../pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
../pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_rigid_small.cpp:496:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (langflag) random = new RanMars(lmp,seed + comm->me);
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_vashishta_table_omp.cpp
../fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
../fix_rigid_small.cpp:2508:13: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_newton_tri.cpp
../fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
../fix_rigid_small.cpp:2306:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (infile && inbody[ibody]) continue;
~~~~~~~~~~~~^
../fix_rigid_small.cpp:2284:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
inertiaatom = tbonus[tri[i]].inertia;
^
../fix_rigid_small.cpp:2199:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
orient[i][0] = lbonus[line[i]].theta - theta_body;
^
../fix_rigid_small.cpp:2266:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
shape = ebonus[ellipsoid[i]].shape;
^
../npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
../npair_half_bin_newton_tri.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_snav_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_msd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_custom.cpp
../dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
../dump_custom.cpp:1029:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) ||
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../dump_custom.cpp:1034:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (choose[i] && (*ptr == 0.0 && value == 0.0) ||
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_ghost_bin_3d_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_bond_react.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_box_relax.cpp
../dump_custom.cpp:1035:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
(*ptr != 0.0 && value != 0.0))
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
../dump_custom.cpp:532:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
double *values;
^~~~~~
../dump_custom.cpp:1044:42: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
for (i = 0; i < nlocal; i++, ptr += nstride) values[i] = *ptr;
~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_reduce_region.cpp
In file included from ../fix_bond_react.cpp:38:0:
../memory.h: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
../memory.h:120:49: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
bigint nbytes = ((bigint) sizeof(TYPE)) * n1*n2;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
../fix_bond_react.cpp:1509:7: note: 'dedup_size' was declared here
int dedup_size;
^~~~~~~~~~
../fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
../fix_bond_react.cpp:1685:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
delete [] temp_limit_glove;
^~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_hydrogen_bonds_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_rigid_local.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_charmmfsw.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_rotate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lubricateU_poly.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_list.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../tad.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_wolf_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_asphere_omp.cpp
../pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_cut_coul_wolf_omp.cpp:182:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_wolf_omp.cpp:175:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_cut_coul_wolf_omp.cpp:182:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_wolf_omp.cpp:175:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_harmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_correlate.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_coord_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_tip4p_omp.cpp
../bond.cpp: In member function 'void LAMMPS_NS::Bond::write_file(int, char**)':
../bond.cpp:275:12: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
fprintf(fp,"\n%s\nN %d EQ %.15g\n\n",arg[5],n,r0);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nvt_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_angle_template.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_reduce.cpp
../fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
../fix_ave_correlate.cpp:482:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
values[lastindex][i] = scalar;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_nharmonic_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../velocity.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_vashishta_table.cpp
../velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
../velocity.cpp:544:29: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zstyle == EQUAL) vz = input->variable->compute_equal(zvar);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../velocity.cpp:539:29: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../velocity.cpp:534:29: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../velocity.cpp:526:31: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (zstyle) v[i][2] += vz;
~~~~~~~~^~~~~
../velocity.cpp:525:31: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (ystyle) v[i][1] += vy;
~~~~~~~~^~~~~
../velocity.cpp:520:31: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (xstyle) v[i][0] = vx;
~~~~~~~~^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_uef.cpp
../velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)':
../velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (v_dim == 2 && domain->dimension == 2)
^~
../velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (coord_dim == 0) {
^~
In file included from ../velocity.cpp:34:0:
../memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
../memory.h:173:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
sfree(array);
^~~~~
../velocity.cpp:168:12: note: 'vhold' was declared here
double **vhold;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_dihedral_partial.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nphug.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fft3d.cpp
../fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
../fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
int i,total,length,offset,num;
^~~~~
../fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
int i,total,length,offset,num;
^~~~~~
../fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
int i,total,length,offset,num;
^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_temp_csld.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_bond_orders.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_meso_stationary.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_deprecated.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_union.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_2d_newton_ssa.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../neighbor.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_reax_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tip4p_long_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_vector.cpp
../fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
../fix_qeq_reax_omp.cpp:351:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
qeq_time = t_end - t_start;
~~~~~~^~~~~~~~~
../fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
extarray = finalvalue;
~~~~~~~~~^~~~~~~~~~~~
../fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
else if (value != finalvalue)
^~
../pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_tip4p_long_soft_omp.cpp:408:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_deform.cpp
../pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_tip4p_long_soft_omp.cpp:408:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_tip4p_long_soft_omp.cpp:408:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_wolf.cpp
../pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_tip4p_long_soft_omp.cpp:408:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
../neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (newtflag) {
^~
../pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_tip4p_long_soft_omp.cpp:391:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_tip4p_long_soft_omp.cpp:387:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
../neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (newtflag) {
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_gaussian_bump.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_append_atoms.cpp
../manifold_gaussian_bump.cpp: In constructor 'cubic_hermite::cubic_hermite(double, double, double, double, double, double, LAMMPS_NS::Error*)':
../manifold_gaussian_bump.cpp:22:31: warning: 'cubic_hermite::yp1' will be initialized after [-Wreorder]
double x0, x1, y0, y1, yp0, yp1;
^~~
../manifold_gaussian_bump.cpp:18:10: warning: 'double cubic_hermite::a' [-Wreorder]
double a, b, c, d;
^
../manifold_gaussian_bump.cpp:26:3: warning: when initialized here [-Wreorder]
cubic_hermite( double x0, double x1, double y0, double y1,
^~~~~~~~~~~~~
../pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
../pair_lj_cut_coul_wolf.cpp:172:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_cut_coul_wolf.cpp:165:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_asphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_halt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../procmap.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../uef_utils.cpp
../fix_halt.cpp: In member function 'virtual void LAMMPS_NS::FixHalt::end_of_step()':
../fix_halt.cpp:188:40: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
id,update->ntimestep,attvalue);
~~~~~~~~~~~~~~~~~ ^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_cluster_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_tip4p.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nvt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_bin_newtoff.cpp
../procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
../procmap.cpp:688:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
vec[5] = kme + 1;
~~~~^~~
../procmap.cpp:687:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
vec[4] = jme + 1;
~~~~^~~
../procmap.cpp:686:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
vec[3] = ime + 1;
~~~~^~~
../procmap.cpp:715:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (me == 0) fclose(fp);
~~~~~~^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_charmm_omp.cpp
../procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
../procmap.cpp:882:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
return index;
^~~~~
../npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
../npair_half_respa_bin_newtoff.cpp:149:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_bin_newtoff.cpp:130:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_bin_newtoff.cpp:149:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_bin_newtoff.cpp:16:
../my_page.h:172:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ndatum += n;
~~~~~~~^~~~
../npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_bin_newtoff.cpp:174:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_bin_newtoff.cpp:175:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_bin_newtoff.cpp:173:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[inum] = i;
~~~~~~~~~~~~~~~~~~~^~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../imbalance_neigh.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck6d_coul_gauss_dsf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_improper_all.cpp
../pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_charmm_coul_charmm_omp.cpp:182:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
../pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_charmm_coul_charmm_omp.cpp:182:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_meamc.cpp
../pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
../pair_buck6d_coul_gauss_dsf.cpp:86:32: warning: unused variable 't' [-Wunused-variable]
double prefactor,erfcc,erfcd,t,arg;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_skip.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_plasticity_atom.cpp
../pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
../pair_buck6d_coul_gauss_dsf.cpp:558:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rsq*f_shift_ij[itype][jtype]);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_buck6d_coul_gauss_dsf.cpp:558:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_buck6d_coul_gauss_dsf.cpp:553:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck6d = ebuck6d - offset[itype][jtype];
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
../pair_buck6d_coul_gauss_dsf.cpp:194:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_buck6d_coul_gauss_dsf.cpp:196:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck6d_coul_gauss_dsf.cpp:189:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = ebuck6d - offset[itype][jtype];
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../math_special.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../variable.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_dpd_fdt.cpp
../pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
../pair_meamc.cpp:587:32: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_meamc.cpp:375:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_skip_respa.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_histo.cpp
../pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
../pair_dpd_fdt.cpp:320:7: warning: unused variable 'irequest' [-Wunused-variable]
int irequest = neighbor->request(this,instance_me);
^~~~~~~~
../npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
../npair_skip_respa.cpp:153:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from ../neigh_list.h:18:0,
from ../npair_skip_respa.cpp:16:
../my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
errorflag = 2;
^~~~~~~~~
../npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_buck6d.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../displace_atoms.cpp
../angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
../angle_cosine_buck6d.cpp:59:7: warning: unused variable 'i' [-Wunused-variable]
int i,i1,i2,i3,n,type,itype,jtype;
^
../angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::write_data(FILE*)':
../angle_cosine_buck6d.cpp:356:61: warning: format '%d' expects argument of type 'int', but argument 6 has type 'double' [-Wformat=]
fprintf(fp,"%d %g %d %d\n",i,k[i],multiplicity[i],th0[i]);
~~~~~~^
../angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
../angle_cosine_buck6d.cpp:181:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = ebuck6d - offset[itype][jtype];
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../angle_cosine_buck6d.cpp:166:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
fpair = forcebuck6d * r32inv;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
../fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
else if (kindflag != kind)
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_inversion_harmonic.cpp
../displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)':
../displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (d_dim == 0) {
^~
../displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (coord_dim == 0) {
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reader_xyz.cpp
../variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
../variable.cpp:3878:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
newtree->value = value;
~~~~~~~~~~~~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_long_omp.cpp
../improper_inversion_harmonic.cpp: In member function 'void LAMMPS_NS::ImproperInversionHarmonic::invang(const int&, const int&, const int&, const int&, const int&, const int&, const int&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&, const double&)':
../improper_inversion_harmonic.cpp:246:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (evflag)
^~
../improper_inversion_harmonic.cpp:249:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
rb3y = vb1y - vb2y;
^~~~
../improper_inversion_harmonic.cpp:142:12: warning: unused variable 'x' [-Wunused-variable]
double **x = atom->x;
^
../improper_inversion_harmonic.cpp:245:10: warning: unused variable 'rb1x' [-Wunused-variable]
double rb1x, rb1y, rb1z, rb2x, rb2y, rb2z, rb3x, rb3y, rb3z;
^~~~
../improper_inversion_harmonic.cpp:245:16: warning: unused variable 'rb1y' [-Wunused-variable]
double rb1x, rb1y, rb1z, rb2x, rb2y, rb2z, rb3x, rb3y, rb3z;
^~~~
../improper_inversion_harmonic.cpp:245:22: warning: unused variable 'rb1z' [-Wunused-variable]
double rb1x, rb1y, rb1z, rb2x, rb2y, rb2z, rb3x, rb3y, rb3z;
^~~~
../improper_inversion_harmonic.cpp:245:28: warning: unused variable 'rb2x' [-Wunused-variable]
double rb1x, rb1y, rb1z, rb2x, rb2y, rb2z, rb3x, rb3y, rb3z;
^~~~
../improper_inversion_harmonic.cpp:245:34: warning: unused variable 'rb2y' [-Wunused-variable]
double rb1x, rb1y, rb1z, rb2x, rb2y, rb2z, rb3x, rb3y, rb3z;
^~~~
../improper_inversion_harmonic.cpp:245:40: warning: unused variable 'rb2z' [-Wunused-variable]
double rb1x, rb1y, rb1z, rb2x, rb2y, rb2z, rb3x, rb3y, rb3z;
^~~~
../variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
../variable.cpp:4631:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
int op,opprevious,flag1,flag2;
^~
../improper_inversion_harmonic.cpp:252:13: warning: 'rb3x' may be used uninitialized in this function [-Wmaybe-uninitialized]
ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,f2,f3,f4,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
vb3x,vb3y,vb3z,
~~~~~~~~~~~~~~~
vb2x,vb2y,vb2z,
~~~~~~~~~~~~~~~
rb3x,rb3y,rb3z);
~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tip4p_long_soft.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../verlet_split.cpp
../variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
../variable.cpp:4091:25: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
for (int i = 0; i < nvec; i++) {
~~^~~~~~
../variable.cpp:4060:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (method == XMAX) value = -BIG;
^~
../pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_buck_coul_long_omp.cpp:172:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck_coul_long_omp.cpp:175:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_buck_coul_long_omp.cpp:171:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_buck_coul_long_omp.cpp:175:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../pair_buck_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
../variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
../variable.cpp:1170:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
int op,opprevious;
^~
../pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
../pair_tip4p_long_soft.cpp:365:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_tip4p_long_soft.cpp:364:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_tip4p_long_soft.cpp:292:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_tip4p_long_soft.cpp:288:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_sphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_charmm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../thr_omp.cpp
../variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
../variable.cpp:950:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
double *vstore;
^~~~~~
../variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
../variable.cpp:3376:29: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (tree) newtree->type = ABS;
~~~~~~~~~~~~~~^~~~~
../variable.cpp:3422:39: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
else argstack[nargstack++] = atan2(value1,value2);
~~~~~^~~~~~~~~~~~~~~
../variable.cpp:3347:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
argstack[nargstack++] = sqrt(value1);
~~~~^~~~~~~~
../pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmm_coul_charmm.cpp:502:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
../pair_lj_charmm_coul_charmm.cpp:168:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)':
../variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
int nfirst,nlast;
^~~~~~
../variable.cpp:206:15: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
num[nvar] = nlast;
~~~~~~~~~~^~~~~~~
../atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)':
../atom.cpp:2267:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (strlen(memstr) + n >= memlength) {
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_multi_2d_newton.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_harmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna_stk.cpp
../atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
../atom.cpp:925:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_torsion_angles.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../math_extra.cpp
../pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
../pair_oxdna_stk.cpp:834:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
../math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
../math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
~~~~^~~~~~
../math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
~~~~^~~~~~
../math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
~~~~^~~~~~
../math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
~~~~^~~~~~
../math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
p[3] = c_phi*p[3] + s_phi*kp[3];
~~~~~^~~~~~
../math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
p[2] = c_phi*p[2] + s_phi*kp[2];
~~~~~^~~~~~
../math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
p[1] = c_phi*p[1] + s_phi*kp[1];
~~~~~^~~~~~
../math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
p[0] = c_phi*p[0] + s_phi*kp[0];
~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_fourier_simple_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_gromacs_coul_gromacs_omp.cpp
../pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_gromacs_coul_gromacs_omp.cpp:182:47: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
../pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_gromacs_coul_gromacs_omp.cpp:182:47: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_3d_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_wolf_cs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gauss_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_control.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_rdf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_rebo.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_multi.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../lattice.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_meso.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_cg_omp.cpp
../npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
../npair_full_multi.cpp:109:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_reaxc_bonds.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../input.cpp
../pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
../pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck_coul_long.cpp:530:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
../pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_long.cpp:176:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
../pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nbin.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_tdpd_cc_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_sphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_lineforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_region.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_long_cs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../create_box.cpp
../pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
../pair_born_coul_long_cs.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_long_cs.cpp:181:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_born_coul_long_cs.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_long_cs.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
+ d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_long_cs.cpp:183:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_born_coul_long_cs.cpp:183:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_nsq_newtoff_ghost.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_ghost_bin_2d_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_gyration_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_long_omp.cpp
../npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
../npair_half_nsq_newtoff_ghost.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_nsq_newtoff_ghost.cpp:99:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_harmonic_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_gromacs_coul_gromacs.cpp
../input.cpp: In member function 'void LAMMPS_NS::Input::partition()':
../input.cpp:1151:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (yesflag) {
^~
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_tip4p_long_omp.cpp:464:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_bond_create.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_line.cpp
../pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
../pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
~~~~~~~~~~~~~~~~~~~^~~~
../pair_lj_gromacs_coul_gromacs.cpp:500:39: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
tc*tc*tc * (coulsw3 + coulsw4*tc);
~~~~~~~^~~
../pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
../pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
~~~~~~~^~~
../pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
(ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
~~~~~~~~~~~~~~~~~~~^~~~
../pair_lj_gromacs_coul_gromacs.cpp:166:47: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
^
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_omp.cpp:470:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_cut_tip4p_long_omp.cpp:464:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph.cpp
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_omp.cpp:470:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../rcb.cpp
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_omp.cpp:470:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
../rcb.cpp:557:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../rcb.cpp:485:18: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
else lo[dim] = valuehalf;
~~~~~~~~^~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_cut.cpp
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_omp.cpp:470:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nh_small.cpp
../rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
../rcb.cpp:1049:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_factory.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_lj93.cpp
../fix_rigid_nh_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNHSmall::final_integrate()':
../fix_rigid_nh_small.cpp:621:7: warning: unused variable 'i' [-Wunused-variable]
int i,ibody;
^
../pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
../pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
../pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
../pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_cg.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_cvff_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_bin_newton_tri_omp.cpp
../improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
../improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
^~
../improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
p = 2.0 - p;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_coul_debye.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_body.cpp
../improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
../improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
^~
../improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
p = 2.0 - p;
^
../improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
../improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_shift.cpp
../improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
../improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
^~
../improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
../improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
^~
../pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cut_coul_debye.cpp:216:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_debye.cpp:212:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
../pair_lj_cut_coul_debye.cpp:110:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cut_coul_debye.cpp:113:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
~~~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_reflect.cpp
../improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
../improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_multi_3d_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_respa_nsq_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sph_taitwater.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_class2_omp.cpp
../fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_wall_reflect.cpp:68:24: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
wallwhich[nwall] = newwall;
~~~~~~~~~~~~~~~~~^~~~~~~~~
../npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
../npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
^
../npair_half_respa_nsq_newtoff.cpp:128:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_respa_nsq_newtoff.cpp:145:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (which == 0) neighptr_middle[n_middle++] = j;
~~~~~~~~^~
In file included from ../neigh_list.h:18:0,
from ../npair_half_respa_nsq_newtoff.cpp:16:
../my_page.h:172:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ndatum += n;
~~~~~~~^~~~
../npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
MyPage<int> *ipage_middle;
^~~~~~~~~~~~
../npair_half_respa_nsq_newtoff.cpp:169:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
firstneigh_middle[i] = neighptr_middle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
../npair_half_respa_nsq_newtoff.cpp:170:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
numneigh_middle[i] = n_middle;
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../npair_half_respa_nsq_newtoff.cpp:168:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
ilist_middle[inum] = i;
~~~~~~~~~~~~~~~~~~~^~~
../npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_cylinder.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_thylakoid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../modify.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_dihedral_local.cpp
../manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
../manifold_thylakoid.cpp:62:65: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type {aka unsigned int}' [-Wformat=]
fprintf(screen,"I have %ld parts. They are:\n", parts.size());
~~~~~~~~~~~~^
../manifold_thylakoid.cpp:63:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( int i = 0; i < parts.size(); ++i ){
~~^~~~~~~~~~~~~~
../compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
../compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
^
../compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
pbuf[n] = 180.0*atan2(s,c)/MY_PI;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_valence_angles.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_spring.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_harmonic_shift_cut_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_deform_eff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_cvff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_reaxc_species.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_cfg_uef.cpp
../improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
../improper_cvff.cpp:209:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
pd = -pd;
~~~^~~~~
../improper_cvff.cpp:208:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
p = 2.0 - p;
~~^~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_mdf.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_harmonic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_long_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_ufm_opt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../msm_cg_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_line.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_opls_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_multi_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_cut_omp.cpp
../npair_full_multi_omp.cpp: In function '_ZN9LAMMPS_NS17NPairFullMultiOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_full_multi_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_full_multi_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~~
../npair_full_multi_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_angle.cpp
../pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair.cpp
../pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:405:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_cut_omp.cpp:401:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_body.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_snad_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_ave_correlate_long.cpp
../fix_ave_correlate_long.cpp: In member function 'void LAMMPS_NS::FixAveCorrelateLong::add(int, double, int)':
../fix_ave_correlate_long.cpp:635:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (insertindex[k]==p) insertindex[k]=0;
~~~~~~~~~~~~~~^~~
../fix_ave_correlate_long.cpp: In member function 'void LAMMPS_NS::FixAveCorrelateLong::add(int, double, double, int)':
../fix_ave_correlate_long.cpp:687:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (insertindex[k]==p) insertindex[k]=0;
~~~~~~~~~~~~~~^~~
../fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::restart(char*)':
../fix_ave_correlate_long.cpp:782:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
|| (pin!=p) || (min!=m))
~~~^~~
../pair_body.cpp: In member function 'virtual void LAMMPS_NS::PairBody::compute(int, int)':
../pair_body.cpp:327:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_bin_newton_tri.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_dens_init.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_vector.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../thermo.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_improper_local.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../lammps.cpp
../compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
../compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
^
../compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
cbuf[n] = 180.0*acos(c)/MY_PI;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_dihedral_all.cpp
../thermo.cpp: In member function 'void LAMMPS_NS::Thermo::init()':
../thermo.cpp:267:37: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (lineflag == ONELINE) sprintf(&format[i][n],"%s ",ptr);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_long_tip4p_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_multi_newton_tri_omp.cpp
../pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
../pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
../pair_lj_long_tip4p_long.cpp:451:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long.cpp:451:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_long_tip4p_long.cpp:446:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_lj_long_tip4p_long.cpp:445:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
../pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
../npair_half_multi_newton_tri_omp.cpp: In function '_ZN9LAMMPS_NS26NPairHalfMultiNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_multi_newton_tri_omp.cpp:132:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~~
../npair_half_multi_newton_tri_omp.cpp:132:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~
../lammps.cpp: In constructor 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, MPI_Comm)':
../lammps.cpp:100:15: warning: 'wdlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
int wdfirst,wdlast;
^~~~~~
../lammps.cpp:100:7: warning: 'wdfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
int wdfirst,wdlast;
^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_harmonic_shift_cut.cpp
../pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
../pair_lj_long_tip4p_long.cpp:1422:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_lj_long_tip4p_long.cpp:1421:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_morse_smooth_linear_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_gayberne_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_comb.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qtb.cpp
../pair_comb.cpp: In member function 'virtual void LAMMPS_NS::PairComb::read_file(char*)':
../pair_comb.cpp:614:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_pe_mol_tally.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../set.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_reset_tools.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../region_cylinder.cpp
../set.cpp: In member function 'void LAMMPS_NS::Set::set(int)':
../set.cpp:844:15: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
quat[1] = xvalue * sintheta2;
~~~~~~~~^~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq.cpp
../set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
../set.cpp:1030:19: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
quat[1] = 0.0;
~~~~~~~~^~~~~
../region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
../region_cylinder.cpp:655:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
add_contact(0,x,xp,yp,zp);
~~~~~~~~~~~^~~~~~~~~~~~~~
../region_cylinder.cpp:655:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
../region_cylinder.cpp:655:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_brownian_poly_omp.cpp
../fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
../fix_qeq.cpp:487:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
return m;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_omp.cpp
../fix_qeq.cpp: In member function 'void LAMMPS_NS::FixQEq::read_file(char*)':
../fix_qeq.cpp:733:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_full_bin_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt.cpp
../npair_full_bin_omp.cpp: In function '_ZN9LAMMPS_NS15NPairFullBinOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_full_bin_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_full_bin_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~~
../npair_full_bin_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_momentum.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rhok.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_eos_cv.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_dpd_energy.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle.cpp
../pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::modify_params(int, char**)':
../pair.cpp:154:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (ncoultablebits > sizeof(float)*CHAR_BIT)
^
../pair.cpp:160:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (ndisptablebits > sizeof(float)*CHAR_BIT)
^
../pair.cpp: In member function 'void LAMMPS_NS::Pair::init_bitmap(double, double, int, int&, int&, int&, int&)':
../pair.cpp:1688:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (ntablebits > sizeof(float)*CHAR_BIT)
^
../pair.cpp:1712:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (nexpbits > sizeof(float)*CHAR_BIT - FLT_MANT_DIG)
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_inertia_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_asphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_dsf_cs.cpp
../pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
../pair.cpp:1663:9: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
e = single(0,1,itype,jtype,rsq,1.0,1.0,f);
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair.cpp:1666:25: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (me == 0) fprintf(fp,"%d %.15g %.15g %.15g\n",i+1,r,e,f);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair.cpp:1673:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (atom->q) atom->q = q_hold;
~~~~~~~~^~~~~~~~
../pair.cpp:1666:25: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (me == 0) fprintf(fp,"%d %.15g %.15g %.15g\n",i+1,r,e,f);
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
../pair.cpp:383:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ftable[i] = qqrd2e/r * fgamma;
~~~~~~~~~^~~~~~~~
../pair.cpp:384:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
etable[i] = qqrd2e/r * egamma;
~~~~~~~~~^~~~~~~~
../pair.cpp:387:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
etable[i] = qqrd2e/r * derfc;
~~~~~~~~~^~~~~~~
../pair.cpp:386:54: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
~~~~~~~~~~~~~^~~~~~
../pair.cpp:386:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
~~~~~~~~^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_group.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_improper.cpp
../pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
../pair_born_coul_dsf_cs.cpp:148:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_dsf_cs.cpp:144:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~~~~~~^~~~~~~~~~~
../pair_born_coul_dsf_cs.cpp:145:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_dsf_cs.cpp:149:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_dsf_cs.cpp:144:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
~^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_drude_transform.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_2d_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_rigid_nph_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../neb.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_grem.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_bop.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_fourier_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_alloy_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_tdpd.cpp
../pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
../pair_bop.cpp:4991:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(j=0;j<strlen(s);j++) {
~^~~~~~~~~~
../pair_bop.cpp:5018:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(j=0;j<strlen(s);j++) {
~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_electron.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_multi_newton_omp.cpp
../npair_half_multi_newton_omp.cpp: In function '_ZN9LAMMPS_NS23NPairHalfMultiNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
../npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
onemols[imol]->nspecial[iatom],
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag[j]-tagprev);
~~~~~~~~~~~~~~~
../npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
tagint tagprev;
^~~~~~~
../npair_half_multi_newton_omp.cpp:156:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~~
../npair_half_multi_newton_omp.cpp:156:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
which = find_special(onemols[imol]->special[iatom],
^
../npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
^~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_full.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_diel.cpp
../pair_bop.cpp:5223:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(nws==3) {
^~
../pair_bop.cpp:4968:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,j,k,n,m;
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_helix_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral_multi_harmonic_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ntopo_angle_all.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_morse_soft.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../imbalance_store.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_sph_rhosum.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_size_nsq_newtoff.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_temp_rescale_eff.cpp
../npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
../npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (includegroup && !(mask[j] & bitmask)) continue;
~~~~~~~~~^~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_long_soft_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_charmm_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_long_coul_long_omp.cpp
../pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
../pair_bop.cpp:3753:27: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
ev_tally_xyz(bt_i,bt_j,nlocal,newton_pair,0.0,0.0,ftmp[0],ftmp[1]
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_bop.cpp:3753:27: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_bop.cpp:3753:27: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_bop.cpp:1767:36: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcA_ikj[0][0]=(-dis_jk[0]*r_ik*r_jk-cosAng_ikj
~~~~~~~~~~
*-dis_ik[0]*r_jk*r_jk)/(r_ik*r_ik*r_jk*r_jk);
~~~~~~~~~~~^~~~~
../pair_bop.cpp:1501:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
bt_sg[nb_jk].temp=temp_jk;
~~~~~~~~~~~~~~~~~^~~~~~~~
../pair_bop.cpp:1766:36: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
dcA_ikj[0][0]=(-dis_jk[0]*r_ik*r_jk-cosAng_ikj
^~~~~~~~~~
../pair_bop.cpp:1764:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
~~~~~~~~~^~~~~~~~~~
../pair_bop.cpp:1765:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
+dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
~~~~~~~~~^~~~~~~~~~
../pair_bop.cpp:3490:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
else if(temp_kk==temp_ji&&setting==0) {
~~~~~~~^~~~~~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_soft_omp.cpp:437:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_soft_omp.cpp:437:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nbin_ssa.cpp
../pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
../pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:437:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
^~~~~
../pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:437:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_long_coul_long_omp.cpp
../pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
../pair_lj_cut_tip4p_long_soft_omp.cpp:420:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH2].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:416:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[jH1].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2].x += fHx;
../pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1].x += fHx;
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_oxdna2_coaxstk.cpp
../pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::compute(int, int)':
../pair_oxdna2_coaxstk.cpp:106:18: warning: unused variable 'delt' [-Wunused-variable]
double delf[3],delt[3],delta[3],deltb[3]; // force, torque increment;
^~~~
../pair_oxdna2_coaxstk.cpp:108:19: warning: unused variable 'v2tmp' [-Wunused-variable]
double v1tmp[3],v2tmp[3],v3tmp[3];
^~~~~
../pair_oxdna2_coaxstk.cpp:108:28: warning: unused variable 'v3tmp' [-Wunused-variable]
double v1tmp[3],v2tmp[3],v3tmp[3];
^~~~~
../pair_oxdna2_coaxstk.cpp:117:10: warning: unused variable 'gamma' [-Wunused-variable]
double gamma,gammacub,rinv_ss_cub,fac;
^~~~~
../pair_oxdna2_coaxstk.cpp:117:16: warning: unused variable 'gammacub' [-Wunused-variable]
double gamma,gammacub,rinv_ss_cub,fac;
^~~~~~~~
../pair_oxdna2_coaxstk.cpp:117:25: warning: unused variable 'rinv_ss_cub' [-Wunused-variable]
double gamma,gammacub,rinv_ss_cub,fac;
^~~~~~~~~~~
../pair_oxdna2_coaxstk.cpp:117:37: warning: unused variable 'fac' [-Wunused-variable]
double gamma,gammacub,rinv_ss_cub,fac;
^~~
../pair_oxdna2_coaxstk.cpp:118:10: warning: unused variable 'aybx' [-Wunused-variable]
double aybx,azbx,rax,ray,raz,rbx;
^~~~
../pair_oxdna2_coaxstk.cpp:118:15: warning: unused variable 'azbx' [-Wunused-variable]
double aybx,azbx,rax,ray,raz,rbx;
^~~~
../pair_oxdna2_coaxstk.cpp:118:20: warning: unused variable 'rax' [-Wunused-variable]
double aybx,azbx,rax,ray,raz,rbx;
^~~
../pair_oxdna2_coaxstk.cpp:118:24: warning: unused variable 'ray' [-Wunused-variable]
double aybx,azbx,rax,ray,raz,rbx;
^~~
../pair_oxdna2_coaxstk.cpp:118:28: warning: unused variable 'raz' [-Wunused-variable]
double aybx,azbx,rax,ray,raz,rbx;
^~~
../pair_oxdna2_coaxstk.cpp:118:32: warning: unused variable 'rbx' [-Wunused-variable]
double aybx,azbx,rax,ray,raz,rbx;
^~~
../pair_oxdna2_coaxstk.cpp:119:10: warning: unused variable 'dcdr' [-Wunused-variable]
double dcdr,dcdrbx;
^~~~
../pair_oxdna2_coaxstk.cpp:119:15: warning: unused variable 'dcdrbx' [-Wunused-variable]
double dcdr,dcdrbx;
^~~~~~
../pair_oxdna2_coaxstk.cpp:120:10: warning: unused variable 'dcdaxbx' [-Wunused-variable]
double dcdaxbx,dcdaybx,dcdazbx;
^~~~~~~
../pair_oxdna2_coaxstk.cpp:120:18: warning: unused variable 'dcdaybx' [-Wunused-variable]
double dcdaxbx,dcdaybx,dcdazbx;
^~~~~~~
../pair_oxdna2_coaxstk.cpp:120:26: warning: unused variable 'dcdazbx' [-Wunused-variable]
double dcdaxbx,dcdaybx,dcdazbx;
^~~~~~~
../pair_oxdna2_coaxstk.cpp:121:10: warning: unused variable 'dcdrax' [-Wunused-variable]
double dcdrax,dcdray,dcdraz;
^~~~~~
../pair_oxdna2_coaxstk.cpp:121:17: warning: unused variable 'dcdray' [-Wunused-variable]
double dcdrax,dcdray,dcdraz;
^~~~~~
../pair_oxdna2_coaxstk.cpp:121:24: warning: unused variable 'dcdraz' [-Wunused-variable]
double dcdrax,dcdray,dcdraz;
^~~~~~
../pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
../pair_oxdna2_coaxstk.cpp:691:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
int irequest;
^~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_table_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_qeq_reax.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_temp_berendsen.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_cossq.cpp
../fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
../fix_qeq_reax.cpp:515:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
qeq_time = t_end - t_start;
~~~~~~^~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_class2_p6.cpp
../angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::write_data(FILE*)':
../angle_class2_p6.cpp:433:66: warning: too many arguments for format [-Wformat-extra-args]
i,theta0[i]/MY_PI*180.0,k2[i],k3[i],k4[i],k5[i],k6[i]);
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_sphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_oxdna_fene.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../manifold_cylinder_dent.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pppm_disp_tip4p.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_property_atom.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_dpd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_global_atom.cpp
../compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
../compute_global_atom.cpp:513:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j >= 0 && j < vmax) vector_atom[i] = source[j];
~~^~~~~~
../compute_global_atom.cpp:444:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (j >= 0 && j < vmax) vector_atom[i] = source[j];
~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_gromacs_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_wall_region_ees.cpp
../pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_gromacs_omp.cpp:148:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
../pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_gromacs_omp.cpp:148:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_skip_size.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_torsion_angles_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cubic.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_displace_atom.cpp
../pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
../pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(PHIS + DPHIDS*t - A3*t*t*t/6.0);
~~~~~~^~
../pair_lj_cubic.cpp:346:39: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
../pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
(PHIS + DPHIDS*t - A3*t*t*t/6.0);
~~~~~~^~
../pair_lj_cubic.cpp:131:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_debye_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../main.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nvt_manifold_rattle.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_meam_spline.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_template.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_dsf_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../meam_impl.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_cut_tip4p_long_soft.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_peri_lps_omp.cpp
../pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
../pair_lj_cut_tip4p_long_soft.cpp:397:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH2;
~~~~~~~~~~~^~~~~
../pair_lj_cut_tip4p_long_soft.cpp:396:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
vlist[n++] = jH1;
~~~~~~~~~~~^~~~~
../pair_lj_cut_tip4p_long_soft.cpp:324:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH2][0] += fH[0];
^
../pair_lj_cut_tip4p_long_soft.cpp:320:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[iH1][0] += fH[0];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../update.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_charmm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_smtbq.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_long_omp.cpp
../pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_coul_long_omp.cpp:176:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_long_omp.cpp:178:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_coul_long_omp.cpp:176:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_long_omp.cpp:178:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_orient_fcc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../mgpt_linalg.cpp
../pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
../pair_smtbq.cpp:2588:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp]) ;
^
../pair_smtbq.cpp:2806:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
dt = t_end - t_init;
~~~^~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nh_sphere_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_tri_lj.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_table.cpp
../pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
../pair_smtbq.cpp:1450:61: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
~~~^~~~~~~~~~
../pair_smtbq.cpp:1450:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
~~~~~~~^~~~~~~~~~~~~~~~~~~
../pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
../pair_tri_lj.cpp:381:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (evflag) ev_tally(i,j,nlocal,newton_pair,
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_addforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_hybrid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_dot.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_hbond_dreiding_lj.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_npt_sphere.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nve_noforce.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_event_tad.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../angle_cosine_periodic_omp.cpp
../pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
../pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (donor_flag == 0) type2param[i][j][k] = nparams;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_peri_neigh_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_gromacs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmmfsw_coul_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_charmm_implicit_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_fs_omp.cpp
../pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
../pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
~~~~~~~~~~~~~~~~~~~^~
../pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
../pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
~~~~~~~~~~~~~~~~~~~^~
../pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmmfsw_coul_long.cpp:1046:16: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
(r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
~~~~~~~^~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
(r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
~~~~~~~^~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:1034:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
../pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
~~~~~~^~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:574:64: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
^
../pair_lj_charmmfsw_coul_long.cpp:633:21: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]);
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:590:20: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
rinv = 1.0/r;
~~~~~^~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = ptable[itable] + fraction*dptable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = vtable[itable] + fraction*dvtable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_torque_chunk.cpp
../pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
../pair_lj_charmmfsw_coul_long.cpp:219:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl6 = -lj4[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_lj_charmmfsw_coul_long.cpp:115:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
int i,j,ii,jj,inum,jnum,itype,jtype,itable;
^~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reader_native.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_force_tally.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_debye.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_colloid_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_freeze.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../nstencil_half_bin_3d_newton_tri.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_msm_omp.cpp
../pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_colloid_omp.cpp:213:31: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz,thr);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
fztmp += delz*fpair;
~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_uef.cpp
../pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
../pair_colloid_omp.cpp:213:31: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
evdwl,0.0,fpair,delx,dely,delz,thr);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_airebo_morse.cpp
../pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
../pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
fztmp += delz*fpair;
~~~~^~~~~~
../pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_born_coul_msm_omp.cpp:167:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_born_coul_msm_omp.cpp:170:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_born_coul_msm_omp.cpp:170:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
../pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
fztmp += delz*fpair;
~~~~^~~~~~
../pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_born_coul_msm_omp.cpp:166:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
^~~~~
../pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_born_coul_msm_omp.cpp:170:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_born_coul_msm_omp.cpp:170:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
../pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
../pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
fztmp += delz*fpair;
~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_peri_lps.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_kolmogorov_crespi_full.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_long.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../improper_fourier.cpp
../pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
../pair_coul_long.cpp:377:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
../pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long.cpp:377:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*erfc;
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
../pair_coul_long.cpp:161:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long.cpp:161:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_yukawa_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_nm_cut_coul_cut.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_property_atom.cpp
../pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
../pair_nm_cut_coul_cut.cpp:486:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
~~~^~~~~~~~~~~~~~~~~~~~
../pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
../pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
~~~~~~~~~~~~~~~~~~
r0n[itype][jtype]*rninv -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
nn[itype][jtype] *
~~~~~~~~~~~~~~~~~~
r0m[itype][jtype]*rminv) -
~~~~~~~~~~~~~~~~~^~~~~~
../pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::read_file(char*)':
../pair_kolmogorov_crespi_full.cpp:902:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_system_props.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_brownian_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_deform.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_comb3.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_xrd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_charmm_implicit.cpp
../fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
../fix_deform.cpp:188:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
set[index].style = VARIABLE;
^
../pair_comb3.cpp: In member function 'virtual void LAMMPS_NS::PairComb3::read_file(char*)':
../pair_comb3.cpp:624:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
ptr = fgets(line,MAXLINE,fp);
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dihedral.cpp
../pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
../pair_lj_charmm_coul_charmm_implicit.cpp:201:37: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
../pair_lj_charmm_coul_charmm_implicit.cpp:134:45: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
~~~~~~~~~~~~~~~~~^~~~~~
../pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_peri_neigh.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_tdpd_source.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_pimd.cpp
../pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
../pair_comb3.cpp:2314:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
{com6+=prefac_ij2*pcrossk*dfc_k;}
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_nph_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_dcd.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_multi_lucy.cpp
../pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
../pair_comb3.cpp:1799:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
prady += 1.0 * btor[2] * bbtor * att_eng;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../pair_comb3.cpp:1798:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
pradx += 1.0 * btor[1] * bbtor * att_eng;
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../npair_half_bin_atomonly_newton_omp.cpp
../pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
../pair_comb3.cpp:2740:34: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
double curlij1,curlji1,dcurlij,dcurlji;
^~~~~~~
../pair_comb3.cpp:2740:26: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
double curlij1,curlji1,dcurlij,dcurlji;
^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../reaxc_valence_angles_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_adp_omp.cpp
../pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
../pair_multi_lucy.cpp:178:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[i][2] += delz*fpair;
~~~~^~~~~~
../pair_multi_lucy.cpp:190:45: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
^
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_eam_fs.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_lj_charmm_coul_long_opt.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_chunk.cpp
../pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
../pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_charmm_coul_long_opt.cpp:209:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../atom_vec_ellipsoid.cpp
../pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
../pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
^~~~~
../pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_lj_charmm_coul_long_opt.cpp:209:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
../pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_colloid.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_xtc.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_coul_cut.cpp
../pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
../pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
return factor_lj*phi;
^~~
../dump_xtc.cpp: In function 'int sizeofint(int)':
../dump_xtc.cpp:559:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
while (size >= num && num_of_bits < 32) {
~~~~~^~~~~~
../dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
../dump_xtc.cpp:600:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
while (bytes[num_of_bytes] >= num) {
~~~~~~~~~~~~~~~~~~~~^~~~~~
../dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
../dump_xtc.cpp:654:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (num_of_bits >= num_of_bytes * 8) {
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
../dump_xtc.cpp:655:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (i = 0; i < num_of_bytes; i++) {
~~^~~~~~~~~~~~~~
../dump_xtc.cpp:660:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (i = 0; i < num_of_bytes-1; i++) {
~~^~~~~~~~~~~~~~~~
../dump_xtc.cpp: In function 'int receivebits(int*, int)':
../dump_xtc.cpp:695:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (lastbits < num_of_bits) {
~~~~~~~~~^~~~~~~~~~~~~
../dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
../dump_xtc.cpp:935:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
^
../dump_xtc.cpp:46:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
#define MYMIN(a,b) ((a) < (b) ? (a) : (b))
~~~~^~~~~
../dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
maxidx = MYMIN(LASTIDX, smallidx + 8) ;
^~~~~
../dump_xtc.cpp:46:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
#define MYMIN(a,b) ((a) < (b) ? (a) : (b))
~~~~^~~~~
../dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
maxidx = MYMIN(LASTIDX, smallidx + 8) ;
^~~~~
../pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
../pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
f[i][2] += delz*fpair;
~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_stress_atom.cpp
../dump_xtc.cpp:1141:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
thiscoord[2] = receivebits(buf, bitsizeint[2]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../dump_xtc.cpp:1140:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
thiscoord[1] = receivebits(buf, bitsizeint[1]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../dump_xtc.cpp:1139:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
thiscoord[0] = receivebits(buf, bitsizeint[0]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../dump_xtc.cpp:952:28: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
abs(thiscoord[2] - prevcoord[2]) < larger) {
~~~~~~~~~~~~~^~~~~~~~~~~~~~
../dump_xtc.cpp:951:28: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
abs(thiscoord[1] - prevcoord[1]) < larger &&
~~~~~~~~~~~~~^~~~~~~~~~~~~~
../dump_xtc.cpp:950:28: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
abs(thiscoord[0] - prevcoord[0]) < larger &&
~~~~~~~~~~~~~^~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_born_coul_msm.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_com.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_thole.cpp
../pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
../pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_msm.cpp:248:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
~~~~~~~~~~~~~~~^~~~~~
../pair_born_coul_msm.cpp:243:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
phicoul = prefactor*egamma;
~~~~~~~~^~~~~~~~~~~~~~~~~~
../pair_born_coul_msm.cpp:243:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
../pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
../pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
~~~~~~~~~~~~~~~^~~~~
../pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_born_coul_msm.cpp:185:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*egamma;
~~~~~~^~~~~~~~~~~~~~~~~~
../pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
+ d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
~~~~~~~~~~~~~~~^~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_msd_chunk.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../dump_image.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../temper_grem.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../fix_shardlow.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_yukawa.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../compute_temp_ramp.cpp
../dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
../dump_image.cpp:1033:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../dump_image.cpp:1027:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
btype = atom->map(onemols[imol]->bond_type[iatom][m]);
^
../dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
btype = atom->map(onemols[imol]->bond_type[iatom][m]);
^
../dump_image.cpp:893:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
image->draw_sphere(bodyarray[k],color,bodyarray[k][3]);
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../dump_image.cpp:1033:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../bond_gromos_omp.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_brownian.cpp
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../ewald_disp.cpp
../dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)':
../dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
int n = 6 + factor*nentry;
~~~~~~^~~~~~~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../mgpt_readpot.cpp
../mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
../mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
double f,dp;
^~
../mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
double alp = al,alm = al;
^~~
../mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
double x0,x1,dx,dr;
^~
mpicxx -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>/src/Obj_mpi=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c++0x -I/usr/include/eigen3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_JPEG -DLMP_USER_OMP -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX=1 -DFFT_FFTW3 -c ../pair_buck_coul_long_cs.cpp
../pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
../pair_brownian.cpp:309:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
Fbmag = prethermostat*sqrt(a_pu);
~~~~^~~~~~
../pair_brownian.cpp:97:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
double xl[3],a_sq,a_sh,a_pu,Fbmag;
^~~~
../pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
../pair_buck_coul_long_cs.cpp:187:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~
../pair_buck_coul_long_cs.cpp:179:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
ecoul = prefactor*erfc;
~~~~~~^~~~~~~~~~~~~~~~
../pair_buck_coul_long_cs.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
~~~~~~~~~~~~~~~~~^~~~~~~~~~
../pair_buck_coul_long_cs.cpp:187:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
~~~~~~~~~~~~~~~^~~~~~
../pair_buck_coul_long_cs.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
~~~~~~~~^~~~~~~~~~~~~~~~
../pair_buck_coul_long_cs.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
table = etable[itable] + fraction*detable[itable];
^
mpicxx -O -Wl,-z,relro improper_class2.o npair_half_size_bin_newtoff.o fix_npt_body.o pair_born_coul_dsf.o dihedral_class2_omp.o pair_lj_long_dipole_long.o compute_erotate_sphere.o pair_buck_omp.o fix_external.o pair_resquared.o ntopo_dihedral_template.o image.o fix_rigid_nve_omp.o npair_full_nsq_omp.o npair_full_bin_atomonly_omp.o pair_morse_smooth_linear.o npair_halffull_newton_omp.o neigh_list.o pair_lj_cut_dipole_cut_omp.o pair_edpd.o npair_full_nsq.o rerun.o pair_ufm_omp.o compute_chunk_atom.o atom_vec_mdpd.o pair_buck.o atom_vec_charge.o manifold_plane.o pair_adp.o fix_nve_eff.o pair_table_rx.o pair_lj96_cut_omp.o pair_beck_omp.o fix_rigid_nve.o write_dump.o reset_ids.o npair_full_bin_atomonly.o compute_angle_local.o pair_buck_mdf.o region_plane.o random_mars.o fix_eos_table_rx.o pair_ufm.o improper_fourier_omp.o pair_lj_expand.o fix_langevin_eff.o angle_fourier.o fix_wall.o compute_pressure_uef.o improper_cossq_omp.o pair_hbond_dreiding_morse.o fix_manifoldforce.o fix_npt_asphere.o pair_edip.o pair_lj96_cut.o pair_beck.o pair_lj_cubic_omp.o pair_gw_zbl.o compute_pair_local.o fix_nphug_omp.o reaxc_allocate.o npair_half_respa_bin_newton_tri_omp.o imbalance_var.o fix_ave_time.o reaxc_io_tools.o fix_setforce.o fix_nve_asphere.o pair_coul_wolf_omp.o bond_nonlinear.o fix_wall_piston.o pair_lj_cut_soft.o pair_oxdna_xstk.o pair_lj_sf_dipole_sf_omp.o fix_nve_dotc_langevin.o fix_npt_uef.o angle_cosine_shift_exp_omp.o angle_fourier_simple.o fix_evaporate.o pair_coul_streitz.o compute_stress_tally.o npair_full_bin_ghost.o improper_ring.o fix_orient_bcc.o pair_hybrid_overlay.o pair_born_coul_long_omp.o comm.o npair_half_respa_nsq_newton.o compute_damage_atom.o atom_vec_sphere.o group.o pair_eam_alloy.o pair_coul_wolf.o pair_lj_cut_coul_msm_omp.o dump_xyz.o manifold_plane_wiggle.o mgpt_splinetab.o pair_lj_sf_dipole_sf.o fix_rattle.o manifold_dumbbell.o dihedral_cosine_shift_exp_omp.o fix_event.o fix_controller.o atom_vec.o fix_ave_chunk.o pair_lj_cut_coul_debye_omp.o reaxc_bonds_omp.o fix_nve_omp.o fix_nve_body.o fix_spring_rg.o pair_momb.o fix_viscous.o pair_morse_opt.o compute_spec_atom.o pair_born_coul_long.o npair_half_multi_newton_tri.o fix_qbmsst.o pair_edip_omp.o min_linesearch.o fix_move.o fix_nve_sphere.o dihedral_charmm_omp.o remap.o region_cone.o fix_ehex.o pair_lj_cut_coul_msm.o fix_flow_gauss.o pair_coul_msm.o npair_full_nsq_ghost_omp.o create_atoms.o bond_nonlinear_omp.o pair_lj_cut_soft_omp.o pair_lj_charmmfsw_coul_charmmfsh.o compute_meso_rho_atom.o gridcomm.o reaxc_bonds.o replicate.o ntopo_angle_partial.o fix_nve.o fix_read_restart.o pair_coul_shield.o reaxc_nonbonded.o npair_half_respa_bin_newtoff_omp.o improper_hybrid.o compute_temp_cs.o nstencil_half_bin_2d_newton.o compute_erotate_asphere.o fix_store.o fix_omp.o atom_vec_molecular.o pair_lj_sdk_omp.o manifold_spine.o improper_zero.o compute_contact_atom.o region_sphere.o region_intersect.o fix_langevin.o compute_angmom_chunk.o npair_full_nsq_ghost.o npair_full_bin.o npair_half_size_nsq_newton_omp.o fix_planeforce.o compute_sna_atom.o compute_dilatation_atom.o pair_gauss_cut.o improper_class2_omp.o npair_half_size_bin_newtoff_omp.o fix_rigid_npt_small.o fix_store_state.o pair_lj_smooth.o region.o pair_soft.o compute_cna_atom.o ntopo_improper_partial.o pair_lj_sdk.o angle_sdk.o fix_spring_chunk.o fix_temp_rescale.o pair_lubricateU.o fix_qeq_slater.o fix_gle.o pair_tersoff_mod_c.o fix_rigid_nph_small.o fix_drude.o write_restart.o fix_nve_asphere_noforce.o compute_ackland_atom.o dihedral_hybrid.o fix_temp_csvr.o write_coeff.o bond_harmonic_shift_omp.o min_cg.o compute_cnp_atom.o min_sd.o pair_tersoff.o verlet.o kspace.o pair_vashishta_omp.o fix_phonon.o integrate.o fix_nph_eff.o fix_nh_asphere.o improper_ring_omp.o dihedral_nharmonic.o fix_rigid_nph.o fix_rigid_omp.o fix_adapt.o compute_heat_flux_tally.o dihedral_fourier_omp.o pair_eim_omp.o pair_kolmogorov_crespi_z.o pair_yukawa_colloid_omp.o nstencil_full_ghost_bin_3d.o msm_omp.o npair_half_multi_newton.o atom_vec_atomic.o pair_brownian_poly.o fix_restrain.o pair_tersoff_omp.o dihedral_helix.o npair_half_bin_newtoff_ghost_omp.o dihedral_multi_harmonic.o dump_atom.o pair_hbond_dreiding_morse_omp.o pair_mgpt.o pair_buck_coul_msm.o pair_lj_cut_dipole_cut.o pair_sph_heatconduction.o pair_sph_idealgas.o pair_lj_cut_thole_long_omp.o dihedral_zero.o ntopo_bond_all.o pair_eam_fs_opt.o fix_rigid.o pair_lj_cut_dipole_long.o bond_class2_omp.o reaxc_tool_box.o fix_wall_lj126.o fix_nvt_sphere.o pair_born_coul_wolf_omp.o pair_lj_sdk_coul_long.o pair_nm_cut_coul_long_omp.o pair_yukawa_colloid.o fix_nh_omp.o fix_nh_body.o fix_ipi.o msm.o xdr_compat.o pair_oxdna_hbond.o npair_halffull_newtoff_omp.o memory.o npair_skip_size_off2on_oneside.o pair_lj_sdk_coul_msm_omp.o nstencil_half_multi_3d_newton_tri.o npair_half_bin_newtoff_ghost.o thr_data.o fix_neb.o domain_omp.o fix_tune_kspace.o minimize.o pair_lj_cut_coul_long_omp.o pair_buck_long_coul_long.o improper_harmonic_omp.o fix_msst.o reader.o fix_nvt_eff.o respa_omp.o read_restart.o imbalance.o bond_class2.o fix_ti_spring.o pair_nm_cut_coul_cut_omp.o bond_zero.o pair_born_coul_wolf.o compute_centro_atom.o compute_dipole_chunk.o fix_efield.o pair_nm_cut_coul_long.o dihedral_class2.o pair_lj_smooth_omp.o compute_hexorder_atom.o pppm_disp_omp.o npair_halffull_newtoff.o pair_lj_sdk_coul_msm.o domain.o pair_zbl_omp.o pair_lj_class2_omp.o pair_lj_cut_opt.o fix_bocs.o fix_enforce2d.o respa.o pair_mdpd.o nstencil_full_bin_3d.o pair_lj_cut_coul_cut.o compute_event_displace.o compute_temp_drude.o compute_vcm_chunk.o npair_half_nsq_newtoff_ghost_omp.o compute_pe.o npair_half_bin_newtoff_omp.o pair_lj_class2_coul_cut.o imbalance_group.o nstencil.o pppm_disp.o read_data.o compute.o dihedral_quadratic.o pair_coul_long_cs.o pair_lubricate_omp.o error.o ntopo_bond_partial.o reaxc_list.o pair_polymorphic.o fix_mvv_tdpd.o nstencil_full_ghost_bin_2d.o pair_mie_cut.o pair_dpd_omp.o pair_lj_cut_coul_dsf_omp.o fix_nvt_sllod_omp.o fix_ttm.o pair_agni_omp.o npair_half_bin_newtoff.o compute_ti.o pair_lj_expand_omp.o pair_peri_ves.o remap_wrap.o pair_lj_charmm_coul_long_soft_omp.o compute_erotate_rigid.o fix_press_berendsen.o manifold_thylakoid_shared.o bond_oxdna2_fene.o fix_print.o pair_lubricate.o fix_rigid_nh_omp.o fix_ttm_mod.o pair_coul_long_soft_omp.o compute_pressure_bocs.o pair_dpd.o pair_lj_cut_coul_dsf.o dump_movie.o nstencil_half_multi_2d_newton_tri.o fix_nvt_sllod.o ntopo_improper_template.o compute_meso_t_atom.o pair_agni.o pair_hbond_dreiding_lj_omp.o comm_tiled.o pair_tersoff_zbl_omp.o force.o body_nparticle.o fix_nh_eff.o fix_rigid_nve_small.o pair_eam_omp.o dihedral_charmm.o library.o npair_half_respa_bin_newton_omp.o compute_dpd.o pair_tersoff_mod_c_omp.o fix_rigid_nh.o pair_coul_cut_soft_omp.o pair_resquared_omp.o fix_spring_self.o bond_fene_expand_omp.o pair_hybrid.o pair_tip4p_long_omp.o pair_lj_charmm_coul_msm_omp.o angle_hybrid.o npair_half_nsq_newtoff_omp.o pair_coul_long_soft.o compute_pressure.o dump.o balance.o pair_sw_omp.o compute_bond.o manifold_torus.o pair_zero.o compute_heat_flux.o pair_nm_cut_omp.o angle_zero.o fix_wall_srd.o fix_nve_sphere_omp.o fix_qeq_shielded.o pppm_omp.o atom_vec_meso.o pair_tersoff_zbl.o bond_hybrid.o improper_umbrella_omp.o compute_basal_atom.o compute_gyration.o fix_edpd_source.o pair_eam.o dump_local.o angle_cosine.o nstencil_full_bin_2d.o pair_tip4p_cut_omp.o npair_half_respa_bin_newton.o pair_coul_cut_soft.o bond_harmonic_shift.o reaxc_nonbonded_omp.o fix_wall_ees.o nbin_standard.o msm_cg.o pair_tip4p_long.o pair_lj_charmm_coul_msm.o atom_vec_peri.o nstencil_full_multi_2d.o npair_half_nsq_newtoff.o reaxc_multi_body_omp.o pair_dsmc.o compute_ke_atom_eff.o pair_lj_sdk_coul_long_omp.o compute_dihedral.o dihedral_fourier.o fix_smd.o pair_vashishta.o fix_srd.o sna.o pair_coul_diel_omp.o compute_bond_local.o dihedral_quadratic_omp.o compute_group_group.o dihedral_spherical.o reaxc_forces_omp.o angle_dipole_omp.o pair_lj_class2.o fix_qeq_dynamic.o pair_tip4p_cut.o npair_half_respa_bin_newton_tri.o nstencil_half_bin_3d_newton.o pair_ilp_graphene_hbn.o fix_filter_corotate.o create_bonds.o fix_ave_histo_weight.o region_block.o reaxc_ffield.o npair_full_bin_ghost_omp.o fix_nvk.o pppm_stagger.o compute_temp_profile.o fix_drag.o compute_erotate_sphere_atom.o reaxc_traj.o npair_half_respa_nsq_newton_omp.o compute_ke_atom.o pair_buck6d_coul_gauss_long.o fix_nvt_sllod_eff.o improper_umbrella.o reaxc_forces.o angle_dipole.o compute_temp_partial.o pair_extep.o npair_half_nsq_newton.o reaxc_hydrogen_bonds.o npair_half_bin_atomonly_newton.o compute_orientorder_atom.o fix_ave_atom.o pair_lj_class2_coul_long_omp.o fix_npt_asphere_omp.o pair_oxdna_coaxstk.o dump_cfg.o fix_nvt_uef.o pair_lj_cut_omp.o reaxc_init_md_omp.o compute_slice.o atom_vec_dipole.o python.o fix_mvv_edpd.o compute_omega_chunk.o pair_multi_lucy_rx.o info.o npair_half_bin_newton_omp.o pair_edip_multi.o atom_vec_tri.o bond_gromos.o npair_half_nsq_newton_omp.o fix_rigid_npt_omp.o pair_cdeam_omp.o fix_thermal_conductivity.o fix_tfmc.o fix_srp.o pair_lennard_mdf.o pair_gran_hooke_omp.o improper_distance.o nstencil_half_multi_2d_newtoff.o fix_gld.o bond_quartic_omp.o fix_recenter.o pair_nm_cut.o reaxc_init_md.o fix_bond_swap.o pair_nb3b_harmonic_omp.o fix_gcmc.o fix_mvv_dpd.o fix_wall_lj1043.o fix_npt_eff.o compute_pair.o fix_nve_tri.o fix_rigid_npt.o bond_morse_omp.o pair_cdeam.o output.o pair_lj_class2_coul_cut_omp.o nstencil_half_bin_2d_newton_tri.o pair_lj_smooth_linear_omp.o pair_gran_hooke.o atom_vec_body.o neigh_request.o fix_indent.o fix_wall_gran_region.o pair_gran_hertz_history_omp.o pair_eam_opt.o pair_table_omp.o pair_lj_long_coul_long_opt.o pair_lubricate_poly_omp.o angle_table_omp.o pair_oxdna2_excv.o pair_lubricate_poly.o pair_tersoff_mod_omp.o pair_nb3b_harmonic.o pair_exp6_rx.o finish.o min_fire.o fix_gravity.o ewald_omp.o bond_quartic.o dihedral_opls.o bond_morse.o compute_saed.o fix_shake.o molecule.o random_park.o pppm.o pair_gran_hooke_history_omp.o pair_lj_smooth_linear.o pair_lj_cut_coul_long_opt.o fix_saed_vtk.o pair_lj_cut.o pair_gran_hertz_history.o reaxc_bond_orders_omp.o pair_eim.o pair_table.o angle_table.o bond_fene_expand.o npair_halffull_newton.o compute_pe_tally.o delete_bonds.o fix_nve_manifold_rattle.o pair_tersoff_mod.o compute_fragment_atom.o fix_reaxc.o pair_line_lj.o fix_rigid_nvt_small.o fix_gravity_omp.o pair_reaxc_omp.o fix_eos_table.o manifold_ellipsoid.o ewald.o pair_sw.o reaxc_multi_body.o pair_peri_pmb_omp.o compute_temp_asphere.o pair_gran_hooke_history.o angle_cosine_shift_omp.o fix_tmd.o pair_soft_omp.o compute_msd_nongauss.o min.o pair_dpd_tstat_omp.o angle_cosine_shift_exp.o ntopo_bond_template.o pair_srp.o fix_qeq_point.o pair_lcbop.o fix_imd.o pair_eff_cut.o pair_reaxc.o fix_qeq_comb_omp.o pair_lj_charmm_coul_long_soft.o compute_property_local.o improper.o angle_cosine_periodic.o npair_half_size_nsq_newtoff_omp.o pair_tersoff_table_omp.o reaxc_lookup.o pair_airebo_morse_omp.o compute_ke.o pair_lj_cut_thole_long.o nstencil_full_multi_3d.o fix_atom_swap.o npair_half_size_bin_newton_omp.o pair_dpd_tstat.o fix_pour.o bond_fene_omp.o compute_temp_body.o npair_half_multi_newtoff_omp.o compute_edpd_temp_atom.o compute_angle.o pair_lj_cut_coul_cut_omp.o meam_funcs.o compute_pe_atom.o pair_zbl.o npair_skip_size_off2on.o min_hftn.o fix_nvt_asphere_omp.o compute_temp_sphere.o compute_temp_region.o fix_qeq_comb.o fft3d_wrap.o atom_vec_edpd.o fix_nh_sphere.o pair_oxdna_excv.o pair_lj_long_coul_long.o fix_respa.o angle_cosine_delta_omp.o pair_tersoff_table.o fix_cmap.o pair_coul_msm_omp.o pair_lj_long_tip4p_long_omp.o compute_pressure_grem.o pair_buck_coul_msm_omp.o pair_airebo_omp.o npair_half_size_bin_newton.o pair_born_coul_wolf_cs.o compute_fep.o bond_fene.o pair_coul_dsf.o imbalance_time.o npair_half_bin_newton_tri_omp.o compute_temp.o pair_tdpd.o pair_sph_taitwater_morris.o pair_lj_cut_coul_long_cs.o npair_half_multi_newtoff.o dihedral_table_omp.o angle_sdk_omp.o delete_atoms.o fix_event_prd.o temper_npt.o angle_quartic_omp.o fix_nvt_asphere.o pair_buck_coul_cut_omp.o compute_body_local.o meam_dens_final.o dihedral_cosine_shift_exp.o meam_setup_global.o prd.o fix_adapt_fep.o pair_rebo_omp.o temper.o angle_cosine_delta.o fix_dt_reset.o comm_brick.o pair_airebo.o pair_snap.o meam_setup_done.o fix_wall_colloid.o compute_vacf.o citeme.o meam_setup_param.o pair_born_omp.o pair_gauss_omp.o pair_morse_omp.o write_data.o body.o pair_lj_class2_coul_long.o pair_meam_sw_spline.o fix_store_force.o npair_half_respa_nsq_newtoff_omp.o fix_nvt_sphere_omp.o pair_lj_cut_coul_long_soft_omp.o fix_langevin_drude.o pppm_disp_tip4p_omp.o universe.o fix_rx.o atom_vec_bond.o compute_property_chunk.o npair_half_bin_newton_ssa.o special.o pair_dpd_fdt_energy.o compute_dpd_atom.o npair_copy.o fix_nvt_omp.o fix_qeq_fire.o fix_minimize.o compute_ke_eff.o pair_peri_eps.o angle_quartic.o pair_gauss.o pair_lj_cut_coul_cut_soft_omp.o pair_morse.o fix_oneway.o change_box.o nstencil_half_bin_3d_newton_ssa.o compute_ke_rigid.o region_prism.o min_quickmin.o pair_lj_cut_coul_long_soft.o angle_cosine_squared_omp.o pair_lj_cut_coul_cut_soft.o pair_mdpd_rhosum.o angle_class2.o npair_half_size_nsq_newton.o pair_lj_cut_tip4p_long_opt.o pair_meam_spline_omp.o read_dump.o compute_temp_region_eff.o run.o pair_sph_lj.o pair_lj_charmm_coul_long.o bond_harmonic_omp.o fix_balance.o fix_neigh_history_omp.o fix_nvt.o fix_deposit.o fix_wall_gran_omp.o fix_heat.o meam_force.o fix_nve_limit.o dihedral_harmonic_omp.o fix_rigid_small_omp.o pair_born.o compute_temp_eff.o pair_lj_cut_tip4p_long.o pair_coul_cut_omp.o compute_meso_e_atom.o fix_addtorque.o angle_cosine_squared.o fix_aveforce.o fix_viscosity.o compute_com_chunk.o nstencil_half_multi_3d_newton.o dihedral_table.o pair_oxdna2_stk.o pair_gayberne.o pair_gw.o compute_aggregate_atom.o bond_harmonic.o fix_neigh_history.o npair_half_bin_newton.o pair_comb_omp.o fix_wall_gran.o pair_peri_pmb.o fix_bond_break.o pair_lj_cut_tip4p_cut.o dihedral_harmonic.o fix_rigid_small.o pair_lj_cut_coul_long.o pair_eam_alloy_opt.o pair_oxdna2_dh.o ntopo.o atom_map.o irregular.o compute_com.o timer.o pair_vashishta_table_omp.o npair_half_bin_newton_tri.o compute_snav_atom.o compute_msd.o dump_custom.o nstencil_half_ghost_bin_3d_newtoff.o fix_bond_react.o fix_box_relax.o compute_reduce_region.o reaxc_hydrogen_bonds_omp.o compute_rigid_local.o dihedral_charmmfsw.o compute_temp_rotate.o pair_lubricateU_poly.o pair_list.o tad.o pair_lj_cut_coul_wolf_omp.o fix.o fix_nph_asphere_omp.o improper_harmonic.o fix_ave_correlate.o bond.o compute_coord_atom.o pppm_tip4p_omp.o fix_rigid_nvt_omp.o ntopo_angle_template.o compute_reduce.o dihedral_nharmonic_omp.o velocity.o pair_vashishta_table.o fix_nh_uef.o ntopo_dihedral_partial.o fix_nphug.o fft3d.o fix_temp_csld.o reaxc_bond_orders.o fix_meso_stationary.o fix_deprecated.o region_union.o nstencil_half_bin_2d_newton_ssa.o neighbor.o fix_qeq_reax_omp.o pair_tip4p_long_soft_omp.o fix_vector.o compute_temp_deform.o pair_lj_cut_coul_wolf.o manifold_gaussian_bump.o fix_append_atoms.o fix_nph_asphere.o fix_halt.o procmap.o uef_utils.o compute_cluster_atom.o pppm_tip4p.o fix_rigid_nvt.o npair_half_respa_bin_newtoff.o pair_lj_charmm_coul_charmm_omp.o imbalance_neigh.o pair_buck6d_coul_gauss_dsf.o ntopo_improper_all.o pair_meamc.o npair_skip.o compute_plasticity_atom.o math_special.o variable.o pair_dpd_fdt.o npair_skip_respa.o fix_ave_histo.o angle_cosine_buck6d.o displace_atoms.o improper_inversion_harmonic.o reader_xyz.o pair_buck_coul_long_omp.o pair_tip4p_long_soft.o verlet_split.o fix_nph_sphere_omp.o pair_lj_charmm_coul_charmm.o atom.o thr_omp.o nstencil_half_multi_2d_newton.o fix_wall_harmonic.o pair_oxdna_stk.o reaxc_torsion_angles.o math_extra.o angle_fourier_simple_omp.o pair_lj_gromacs_coul_gromacs_omp.o nstencil_half_bin_3d_newtoff.o pair_coul_wolf_cs.o pair_gauss_cut_omp.o reaxc_control.o fix_nph_body.o compute_rdf.o pair_rebo.o npair_full_multi.o lattice.o fix_meso.o pppm_cg_omp.o fix_reaxc_bonds.o pair_buck_coul_long.o input.o nbin.o compute_tdpd_cc_atom.o fix_nph_sphere.o fix_lineforce.o fix_wall_region.o pair_born_coul_long_cs.o create_box.o npair_half_nsq_newtoff_ghost.o nstencil_half_ghost_bin_2d_newtoff.o compute_gyration_chunk.o pair_lj_cut_tip4p_long_omp.o angle_harmonic_omp.o pair_lj_gromacs_coul_gromacs.o fix_bond_create.o atom_vec_line.o fix_nph.o rcb.o pair_buck_coul_cut.o fix_rigid_nh_small.o manifold_factory.o fix_wall_lj93.o pppm_cg.o improper_cvff_omp.o npair_half_size_bin_newton_tri_omp.o pair_lj_cut_coul_debye.o fix_nvt_body.o angle_cosine_shift.o fix_wall_reflect.o nstencil_half_multi_3d_newtoff.o npair_half_respa_nsq_newtoff.o pair_sph_taitwater.o angle_class2_omp.o manifold_cylinder.o manifold_thylakoid.o modify.o compute_dihedral_local.o reaxc_valence_angles.o fix_spring.o bond_harmonic_shift_cut_omp.o compute_temp_deform_eff.o improper_cvff.o fix_reaxc_species.o dump_cfg_uef.o pair_lj_mdf.o angle_harmonic.o fix_nh.o pair_lj_charmm_coul_long_omp.o pair_ufm_opt.o msm_cg_omp.o fix_nve_line.o dihedral_opls_omp.o npair_full_multi_omp.o pair_lj_cut_tip4p_cut_omp.o atom_vec_angle.o npair.o pair_body.o compute_snad_atom.o fix_ave_correlate_long.o npair_half_size_bin_newton_tri.o meam_dens_init.o reaxc_vector.o thermo.o compute_improper_local.o lammps.o ntopo_dihedral_all.o pair_lj_long_tip4p_long.o npair_half_multi_newton_tri_omp.o bond_harmonic_shift_cut.o pair_morse_smooth_linear_omp.o pair_gayberne_omp.o pair_comb.o fix_qtb.o compute_pe_mol_tally.o set.o reaxc_reset_tools.o region_cylinder.o fix_qeq.o pair_brownian_poly_omp.o angle_cosine_omp.o npair_full_bin_omp.o fix_npt.o fix_momentum.o fix_rhok.o fix_eos_cv.o fix_dpd_energy.o pair.o angle.o compute_inertia_chunk.o fix_nh_asphere_omp.o pair_born_coul_dsf_cs.o fix_group.o compute_improper.o fix_drude_transform.o nstencil_half_bin_2d_newtoff.o fix_rigid_nph_omp.o neb.o fix_grem.o pair_bop.o angle_fourier_omp.o pair_eam_alloy_omp.o atom_vec_tdpd.o atom_vec_electron.o npair_half_multi_newton_omp.o atom_vec_full.o pair_coul_diel.o dihedral_helix_omp.o dihedral_multi_harmonic_omp.o ntopo_angle_all.o pair_morse_soft.o imbalance_store.o pair_sph_rhosum.o npair_half_size_nsq_newtoff.o fix_temp_rescale_eff.o pair_lj_cut_tip4p_long_soft_omp.o angle_charmm_omp.o pair_lj_long_coul_long_omp.o nbin_ssa.o pair_buck_long_coul_long_omp.o pair_oxdna2_coaxstk.o bond_table_omp.o fix_qeq_reax.o fix_temp_berendsen.o improper_cossq.o angle_class2_p6.o fix_npt_sphere_omp.o bond_oxdna_fene.o manifold_cylinder_dent.o pppm_disp_tip4p.o fix_property_atom.o atom_vec_dpd.o compute_global_atom.o pair_lj_gromacs_omp.o fix_wall_region_ees.o npair_skip_size.o reaxc_torsion_angles_omp.o pair_lj_cubic.o compute_displace_atom.o pair_coul_debye_omp.o main.o fix_nvt_manifold_rattle.o pair_meam_spline.o atom_vec_template.o fix_npt_omp.o pair_coul_dsf_omp.o meam_impl.o pair_lj_cut_tip4p_long_soft.o pair_peri_lps_omp.o update.o angle_charmm.o pair_smtbq.o pair_coul_long_omp.o fix_orient_fcc.o mgpt_linalg.o fix_nh_sphere_omp.o pair_tri_lj.o bond_table.o fix_addforce.o atom_vec_hybrid.o fix_nve_dot.o pair_hbond_dreiding_lj.o fix_npt_sphere.o fix_nve_noforce.o fix_event_tad.o angle_cosine_periodic_omp.o fix_peri_neigh_omp.o pair_lj_gromacs.o pair_lj_charmmfsw_coul_long.o pair_lj_charmm_coul_charmm_implicit_omp.o pair_eam_fs_omp.o compute_torque_chunk.o reader_native.o compute_force_tally.o pair_coul_debye.o pair_colloid_omp.o fix_freeze.o nstencil_half_bin_3d_newton_tri.o pair_born_coul_msm_omp.o compute_temp_uef.o pair_airebo_morse.o pair_peri_lps.o pair_kolmogorov_crespi_full.o pair_coul_long.o improper_fourier.o pair_yukawa_omp.o pair_nm_cut_coul_cut.o compute_property_atom.o reaxc_system_props.o pair_brownian_omp.o fix_deform.o pair_comb3.o compute_xrd.o pair_lj_charmm_coul_charmm_implicit.o dihedral.o fix_peri_neigh.o fix_tdpd_source.o fix_pimd.o fix_nph_omp.o dump_dcd.o pair_multi_lucy.o npair_half_bin_atomonly_newton_omp.o reaxc_valence_angles_omp.o pair_adp_omp.o pair_eam_fs.o pair_lj_charmm_coul_long_opt.o compute_temp_chunk.o atom_vec_ellipsoid.o pair_colloid.o dump_xtc.o pair_coul_cut.o compute_stress_atom.o pair_born_coul_msm.o compute_temp_com.o pair_thole.o compute_msd_chunk.o dump_image.o temper_grem.o fix_shardlow.o pair_yukawa.o compute_temp_ramp.o bond_gromos_omp.o pair_brownian.o ewald_disp.o mgpt_readpot.o pair_buck_coul_long_cs.o -lfftw3 -ljpeg -lstdc++ -fopenmp -o ../lmp_mpi
size ../lmp_mpi
text data bss dec hex filename
10896418 9009 28420 10933847 a6d657 ../lmp_mpi
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/Obj_mpi'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
mv src/lmp_mpi src/lammps
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir test; cp examples/crack/* test/
cd test; ./../src/lammps < in.crack
LAMMPS (20 Apr 2018)
OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (../comm.cpp:90)
using 1 OpenMP thread(s) per MPI task
Lattice spacing in x,y,z = 1.11428 1.92998 1.11428
Created orthogonal box = (0 0 -0.278569) to (111.428 77.1994 0.278569)
1 by 1 by 1 MPI processor grid
Created 8141 atoms
Time spent = 0.00965544 secs
302 atoms in group lower
302 atoms in group upper
604 atoms in group boundary
7537 atoms in group mobile
841 atoms in group leftupper
841 atoms in group leftlower
Setting atom values ...
841 settings made for type
Setting atom values ...
841 settings made for type
Setting atom values ...
302 settings made for type
Setting atom values ...
302 settings made for type
WARNING: Temperature for thermo pressure is not for group all (../thermo.cpp:489)
Neighbor list info ...
update every 1 steps, delay 5 steps, check yes
max neighbors/atom: 2000, page size: 100000
master list distance cutoff = 2.8
ghost atom cutoff = 2.8
binsize = 1.4, bins = 80 56 1
1 neighbor lists, perpetual/occasional/extra = 1 0 0
(1) pair lj/cut, perpetual
attributes: half, newton on
pair build: half/bin/atomonly/newton
stencil: half/bin/2d/newton
bin: standard
Setting up Verlet run ...
Unit style : lj
Current step : 0
Time step : 0.003
Per MPI rank memory allocation (min/avg/max) = 2.799 | 2.799 | 2.799 Mbytes
Step Temp E_pair E_mol TotEng Press Volume
0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917
200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101
400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464
600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569
800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226
1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116
1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863
1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893
1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772
1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017
2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853
2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136
2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991
2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325
2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526
3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552
3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003
3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909
3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783
3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348
4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82
4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113
4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666
4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925
4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122
5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637
Loop time of 91.4551 on 1 procs for 5000 steps with 8141 atoms
Performance: 14170.892 tau/day, 54.672 timesteps/s
99.9% CPU use with 1 MPI tasks x 1 OpenMP threads
MPI task timing breakdown:
Section | min time | avg time | max time |%varavg| %total
---------------------------------------------------------------
Pair | 73.471 | 73.471 | 73.471 | 0.0 | 80.34
Neigh | 2.4344 | 2.4344 | 2.4344 | 0.0 | 2.66
Comm | 0.12734 | 0.12734 | 0.12734 | 0.0 | 0.14
Output | 0.0146 | 0.0146 | 0.0146 | 0.0 | 0.02
Modify | 11.682 | 11.682 | 11.682 | 0.0 | 12.77
Other | | 3.726 | | | 4.07
Nlocal: 8141 ave 8141 max 8141 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost: 0 ave 0 max 0 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs: 71389 ave 71389 max 71389 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Total # of neighbors = 71389
Ave neighs/atom = 8.76907
Neighbor list builds = 100
Dangerous builds = 0
Total wall time: 0:01:31
rm -rf test
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/lammps/usr/bin/lammps contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/lammps/usr/bin/lammps was not linked against libmpi_cxx.so.40 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/lammps/usr/bin/lammps was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'lammps-dbgsym' in '../lammps-dbgsym_0~20180510.gitaa1d815fe-4_armhf.deb'.
dpkg-deb: building package 'lammps' in '../lammps_0~20180510.gitaa1d815fe-4_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../lammps_0~20180510.gitaa1d815fe-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build lammps-0~20180510.gitaa1d815fe
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-05-20T23:50:47Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
lammps_0~20180510.gitaa1d815fe-4_armhf.changes:
-----------------------------------------------
Format: 1.8
Date: Tue, 15 May 2018 18:24:32 +0200
Source: lammps
Binary: lammps lammps-doc
Architecture: armhf
Version: 0~20180510.gitaa1d815fe-4
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Anton Gladky <gladk@debian.org>
Description:
lammps - Molecular Dynamics Simulator
lammps-doc - Molecular Dynamics Simulator. Documentation and examples
Changes:
lammps (0~20180510.gitaa1d815fe-4) unstable; urgency=medium
.
* [3958d4e] Disable mpi-unit-test on armhf and armel
Checksums-Sha1:
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Checksums-Sha256:
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a17c7602a48e904344b53ca6eb9354b25943a3e63bb1e89caf7eb435c05d37e7 5974 lammps_0~20180510.gitaa1d815fe-4_armhf.buildinfo
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Files:
90b5f8f8a58238c48b07658b17a2f459 19815196 debug optional lammps-dbgsym_0~20180510.gitaa1d815fe-4_armhf.deb
8677e71e625005dc05cc201c01b4ba6b 5974 science optional lammps_0~20180510.gitaa1d815fe-4_armhf.buildinfo
d6c45754675928c5ff7eb8273898b3b9 2929296 science optional lammps_0~20180510.gitaa1d815fe-4_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
lammps-dbgsym_0~20180510.gitaa1d815fe-4_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 19815196 bytes: control archive=544 bytes.
411 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: lammps-dbgsym
Source: lammps
Version: 0~20180510.gitaa1d815fe-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 21679
Depends: lammps (= 0~20180510.gitaa1d815fe-4)
Section: debug
Priority: optional
Description: debug symbols for lammps
Build-Ids: 3119df7a2852f12ae01408d0930440147c9d69df
drwxr-xr-x root/root 0 2018-05-15 16:24 ./
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/lib/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/lib/debug/.build-id/31/
-rw-r--r-- root/root 22188276 2018-05-15 16:24 ./usr/lib/debug/.build-id/31/19df7a2852f12ae01408d0930440147c9d69df.debug
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-05-15 16:24 ./usr/share/doc/lammps-dbgsym -> lammps
lammps_0~20180510.gitaa1d815fe-4_armhf.deb
------------------------------------------
new Debian package, version 2.0.
size 2929296 bytes: control archive=1084 bytes.
1130 bytes, 22 lines control
263 bytes, 4 lines md5sums
Package: lammps
Version: 0~20180510.gitaa1d815fe-4
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 10683
Depends: libc6 (>= 2.17), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:4.0), libgomp1 (>= 4.9), libjpeg62-turbo (>= 1.3.1), libopenmpi3, libstdc++6 (>= 5.2), mpi-default-bin
Recommends: lammps-doc
Section: science
Priority: optional
Homepage: http://lammps.sandia.gov/
Description: Molecular Dynamics Simulator
LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale
Atomic/Molecular Massively Parallel Simulator.
.
LAMMPS has potentials for soft materials (biomolecules, polymers) and
solid-state materials (metals, semiconductors) and coarse-grained or
mesoscopic systems. It can be used to model atoms or, more generically, as a
parallel particle simulator at the atomic, meso, or continuum scale.
.
LAMMPS runs on single processors or in parallel using message-passing
techniques and a spatial-decomposition of the simulation domain. The code is
designed to be easy to modify or extend with new functionality.
drwxr-xr-x root/root 0 2018-05-15 16:24 ./
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/bin/
-rwxr-xr-x root/root 10909160 2018-05-15 16:24 ./usr/bin/lammps
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/doc/lammps/
-rw-r--r-- root/root 2533 2018-05-15 16:24 ./usr/share/doc/lammps/changelog.Debian.gz
-rw-r--r-- root/root 15474 2016-11-12 06:38 ./usr/share/doc/lammps/copyright
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/man/
drwxr-xr-x root/root 0 2018-05-15 16:24 ./usr/share/man/man2/
-rw-r--r-- root/root 767 2018-05-15 16:24 ./usr/share/man/man2/lammps.2012-02-23.gz
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
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| Summary |
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Build Architecture: armhf
Build-Space: 596844
Build-Time: 3066
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 989
Job: lammps_0~20180510.gitaa1d815fe-4
Machine Architecture: armhf
Package: lammps
Package-Time: 4193
Source-Version: 0~20180510.gitaa1d815fe-4
Space: 596844
Status: successful
Version: 0~20180510.gitaa1d815fe-4
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Finished at 2018-05-20T23:50:47Z
Build needed 01:09:53, 596844k disc space