kmc →
2.3+dfsg-6 →
armhf → 2018-07-14 05:32:39
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| kmc 2.3+dfsg-6 (armhf) Sat, 14 Jul 2018 05:25:01 +0000 |
+==============================================================================+
Package: kmc
Version: 2.3+dfsg-6
Source Version: 2.3+dfsg-6
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-eb948ada-2cfe-4671-935d-632b89e07c6e' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.9 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.6 MB]
Fetched 23.5 MB in 11s (2075 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'kmc' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/kmc.git
Please use:
git clone https://salsa.debian.org/med-team/kmc.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 163 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main kmc 2.3+dfsg-6 (dsc) [2188 B]
Get:2 http://172.17.0.1/private buster-staging/main kmc 2.3+dfsg-6 (tar) [129 kB]
Get:3 http://172.17.0.1/private buster-staging/main kmc 2.3+dfsg-6 (diff) [31.5 kB]
Fetched 163 kB in 0s (1112 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/kmc-72ASrk/kmc-2.3+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/kmc-72ASrk' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-INC6Ys/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-INC6Ys/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-INC6Ys/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (9471 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 39 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15728 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs
Filtered Build-Depends: debhelper (>= 11~), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs
dpkg-deb: building package 'sbuild-build-depends-kmc-dummy' in '/<<BUILDDIR>>/resolver-INC6Ys/apt_archive/sbuild-build-depends-kmc-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-kmc-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Sources [527 B]
Get:5 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ Packages [609 B]
Fetched 2469 B in 0s (9527 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install kmc build dependencies (apt-based resolver)
---------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dbus dbus-user-session e2fsprogs-l10n libexpat1 libnss-systemd
libpam-systemd libsasl2-modules systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
asciidoctor autoconf automake autopoint autotools-dev bsdmainutils d-shlibs
debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gettext
gettext-base groff-base help2man intltool-debian libarchive-zip-perl libbsd0
libbz2-dev libcroco3 libelf1 libfile-stripnondeterminism-perl libfreetype6
libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu-le-hb0 libicu60
liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libruby2.5
libsigsegv2 libtimedate-perl libtool libxml2 libyaml-0-2 m4 man-db
po-debconf rake ruby ruby-asciidoctor ruby-did-you-mean ruby-minitest
ruby-net-telnet ruby-power-assert ruby-test-unit ruby-xmlrpc ruby2.5
rubygems-integration zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl ri ruby-dev bundler
Recommended packages:
curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl zip
fonts-lato libjs-jquery
The following NEW packages will be installed:
asciidoctor autoconf automake autopoint autotools-dev bsdmainutils d-shlibs
debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gettext
gettext-base groff-base help2man intltool-debian libarchive-zip-perl libbsd0
libbz2-dev libcroco3 libelf1 libfile-stripnondeterminism-perl libfreetype6
libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu-le-hb0 libicu60
liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libruby2.5
libsigsegv2 libtimedate-perl libtool libxml2 libyaml-0-2 m4 man-db
po-debconf rake ruby ruby-asciidoctor ruby-did-you-mean ruby-minitest
ruby-net-telnet ruby-power-assert ruby-test-unit ruby-xmlrpc ruby2.5
rubygems-integration sbuild-build-depends-kmc-dummy zlib1g-dev
0 upgraded, 56 newly installed, 0 to remove and 39 not upgraded.
Need to get 13.6 MB/25.3 MB of archives.
After this operation, 86.1 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-INC6Ys/apt_archive ./ sbuild-build-depends-kmc-dummy 0.invalid.0 [896 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf liblocale-gettext-perl armhf 1.07-3+b2 [18.3 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-3 [234 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-3 [106 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-3 [64.7 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf rubygems-integration all 1.11 [4994 B]
Get:13 http://172.17.0.1/private buster-staging/main armhf rake all 12.3.1-3 [66.9 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf ruby-did-you-mean all 1.2.1-1 [14.4 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf ruby-minitest all 5.10.3-1 [53.5 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf ruby-net-telnet all 0.1.1-2 [12.5 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf ruby-power-assert all 1.1.1-1 [10.9 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf ruby-test-unit all 3.2.7-1 [72.3 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf ruby-xmlrpc all 0.3.0-1 [23.5 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libyaml-0-2 armhf 0.2.1-1 [38.8 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libruby2.5 armhf 2.5.1-3 [3125 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf ruby2.5 armhf 2.5.1-3 [384 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf ruby armhf 1:2.5.1 [11.3 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf ruby-asciidoctor all 1.5.7.1-1 [183 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf asciidoctor armhf 1.5.7.1-1 [63.9 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.82 [18.8 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.042-1 [20.1 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.042-1 [12.1 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.8.2-2 [832 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.3.5 [981 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf help2man armhf 1.47.6 [169 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-8.1 [26.9 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf dh-exec armhf 0.23+b5 [25.3 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libicu60:armhf.
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Unpacking libicu60:armhf (60.2-6) ...
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Unpacking libxml2:armhf (2.9.4+dfsg1-7) ...
Selecting previously unselected package libcroco3:armhf.
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Unpacking libcroco3:armhf (0.6.12-2) ...
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Unpacking gettext (0.19.8.1-6) ...
Selecting previously unselected package intltool-debian.
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Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
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Unpacking po-debconf (1.0.20) ...
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Unpacking debhelper (11.3.5) ...
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Unpacking help2man (1.47.6) ...
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Unpacking libbz2-dev:armhf (1.0.6-8.1) ...
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Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
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Unpacking dh-exec (0.23+b5) ...
Selecting previously unselected package sbuild-build-depends-kmc-dummy.
Preparing to unpack .../55-sbuild-build-depends-kmc-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-kmc-dummy (0.invalid.0) ...
Setting up libbz2-dev:armhf (1.0.6-8.1) ...
Setting up ruby-xmlrpc (0.3.0-1) ...
Setting up libarchive-zip-perl (1.60-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libelf1:armhf (0.170-0.5) ...
Setting up groff-base (1.22.3-10) ...
Setting up libglib2.0-0:armhf (2.56.1-2) ...
No schema files found: removed existing output file.
Setting up d-shlibs (0.82) ...
Setting up gettext-base (0.19.8.1-6) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up libfreetype6:armhf (2.8.1-2) ...
Setting up libmagic-mgc (1:5.33-3) ...
Setting up libmagic1:armhf (1:5.33-3) ...
Setting up libgraphite2-3:armhf (1.3.11-2) ...
Setting up ruby-did-you-mean (1.2.1-1) ...
Setting up libyaml-0-2:armhf (0.2.1-1) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Setting up dwz (0.12-2) ...
Setting up autotools-dev (20180224.1) ...
Setting up ruby-net-telnet (0.1.1-2) ...
Setting up liblocale-gettext-perl (1.07-3+b2) ...
Setting up rubygems-integration (1.11) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up ruby-minitest (5.10.3-1) ...
Setting up autopoint (0.19.8.1-6) ...
Setting up ruby-power-assert (1.1.1-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (0.042-1) ...
Setting up ruby-test-unit (3.2.7-1) ...
Setting up libharfbuzz0b:armhf (1.8.2-2) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.33-3) ...
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up help2man (1.47.6) ...
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2.1) ...
Setting up rake (12.3.1-3) ...
Setting up libicu-le-hb0:armhf (1.0.3+git161113-5) ...
Setting up dh-strip-nondeterminism (0.042-1) ...
Setting up libruby2.5:armhf (2.5.1-3) ...
Setting up libicu60:armhf (60.2-6) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up ruby2.5 (2.5.1-3) ...
Setting up gettext (0.19.8.1-6) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up ruby (1:2.5.1) ...
Setting up po-debconf (1.0.20) ...
Setting up ruby-asciidoctor (1.5.7.1-1) ...
Setting up debhelper (11.3.5) ...
Setting up dh-autoreconf (19) ...
Setting up asciidoctor (1.5.7.1-1) ...
Setting up dh-exec (0.23+b5) ...
Setting up sbuild-build-depends-kmc-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.30-21+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-19 gcc-7_7.3.0-19 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-19 libstdc++6_8.1.0-8+rpi1 linux-libc-dev_4.16.12-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 asciidoctor_1.5.7.1-1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3 binutils_2.30-21+rpi1 binutils-arm-linux-gnueabihf_2.30-21+rpi1 binutils-common_2.30-21+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32-0.1 build-essential_12.5 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.3.0-3+rpi1 cpp-7_7.3.0-19 d-shlibs_0.82 dash_0.5.8-2.10 dbus_1.12.8-3 dbus-user-session_1.12.8-3 debconf_1.5.67 debhelper_11.3.5 debianutils_4.8.6 dh-autoreconf_19 dh-exec_0.23+b5 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dirmngr_2.2.8-1 dmsetup_2:1.02.145-4.1+b4 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 dwz_0.12-2 e2fslibs_1.44.2-1 e2fsprogs_1.44.2-1 e2fsprogs-l10n_1.44.2-1 fakeroot_1.22-2 fdisk_2.32-0.1 file_1:5.33-3 findutils_4.6.0+git+20171230-2 g++_4:7.3.0-3+rpi1 g++-7_7.3.0-19 gcc_4:7.3.0-3+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b7 gcc-5-base_5.5.0-8 gcc-7_7.3.0-19 gcc-7-base_7.3.0-19 gcc-8-base_8.1.0-8+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gnupg_2.2.8-1 gnupg-agent_2.2.8-1 gnupg-l10n_2.2.8-1 gnupg-utils_2.2.8-1 gpg_2.2.8-1 gpg-agent_2.2.8-1 gpg-wks-client_2.2.8-1 gpg-wks-server_2.2.8-1 gpgconf_2.2.8-1 gpgsm_2.2.8-1 gpgv_2.2.8-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 help2man_1.47.6 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-19 libassuan0_2.5.1-2 libatomic1_8.1.0-8+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.30-21+rpi1 libblkid1_2.32-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-8+rpi1 libcilkrts5_7.3.0-19 libcom-err2_1.44.2-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.8-3 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1+b4 libdpkg-perl_1.19.0.5 libdrm-common_2.4.92-1+rpi1 libdrm2_2.4.92-1+rpi1 libelf1_0.170-0.5 libexpat1_2.2.5-3 libext2fs2_1.44.2-1 libfakeroot_1.22-2 libfdisk1_2.32-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.042-1 libfreetype6_2.8.1-2 libgcc-7-dev_7.3.0-19 libgcc1_1:8.1.0-8+rpi1 libgcrypt20_1.8.3-1 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8.1.0-8+rpi1 libgpg-error0_1.31-1 libgraphite2-3_1.3.11-2 libharfbuzz0b_1.8.2-2 libhogweed4_3.4-1 libicu-le-hb0_1.0.3+git161113-5 libicu60_60.2-6 libidn11_1.33-2.2 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl19_0.19-1 libjson-c3_0.12.1-1.3 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.46+dfsg-5+rpi1 libldap-common_2.4.46+dfsg-5+rpi1 liblocale-gettext-perl_1.07-3+b2 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-3 libmagic1_1:5.33-3 libmount1_2.32-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180210-4 libncurses6_6.1+20180210-4 libncursesw5_6.1+20180210-4 libncursesw6_6.1+20180210-4 libnettle6_3.4-1 libnpth0_1.5-4 libnss-systemd_238-4 libp11-kit0_0.23.12-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpcre3_2:8.39-9 libperl5.24_5.24.1-7 libperl5.26_5.26.2-6 libpipeline1_1.5.0-1 libplymouth4_0.9.3-3 libpng16-16_1.6.34-1 libprocps7_2:3.3.15-2 libreadline7_7.0-5 libruby2.5_2.5.1-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-2 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.32-0.1 libsqlite3-0_3.24.0-1 libss2_1.44.2-1 libssl1.1_1.1.0h-4 libstdc++-7-dev_7.3.0-19 libstdc++6_8.1.0-8+rpi1 libsystemd0_238-4 libtasn1-6_4.13-3 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-4 libtinfo6_6.1+20180210-4 libtool_2.4.6-2.1 libubsan0_7.3.0-19 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32-0.1 libxml2_2.9.4+dfsg1-7 libyaml-0-2_0.2.1-1 libzstd1_1.3.4+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.16.12-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mount_2.32-0.1 multiarch-support_2.27-3+rpi1 nano_2.9.8-1 ncurses-base_6.1+20180210-4 ncurses-bin_6.1+20180210-4 netbase_5.4 openssl_1.1.0h-4 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-6 perl-base_5.26.2-6 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-6 pinentry-curses_1.1.0-1 plymouth_0.9.3-3 po-debconf_1.0.20 procps_2:3.3.15-2 rake_12.3.1-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 ruby_1:2.5.1 ruby-asciidoctor_1.5.7.1-1 ruby-did-you-mean_1.2.1-1 ruby-minitest_5.10.3-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_1.1.1-1 ruby-test-unit_3.2.7-1 ruby-xmlrpc_0.3.0-1 ruby2.5_2.5.1-3 rubygems-integration_1.11 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-kmc-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-2 tzdata_2018e-1 udev_238-4 util-linux_2.32-0.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Jul 11 20:07:20 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./kmc_2.3+dfsg-6.dsc
dpkg-source: info: extracting kmc in /<<BUILDDIR>>/kmc-2.3+dfsg
dpkg-source: info: unpacking kmc_2.3+dfsg.orig.tar.gz
dpkg-source: info: unpacking kmc_2.3+dfsg-6.debian.tar.xz
dpkg-source: info: applying disable-asmlib
dpkg-source: info: applying use-shared-libs
dpkg-source: info: applying hardening
dpkg-source: info: applying 0005-Add-static-library-target-to-makefile.patch
dpkg-source: info: applying 0007-Use-standard-compiler-environment-variables.patch
dpkg-source: info: applying spelling
dpkg-source: info: applying newish_gcc_build_fix.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-eb948ada-2cfe-4671-935d-632b89e07c6e
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package kmc
dpkg-buildpackage: info: source version 2.3+dfsg-6
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build kmc-2.3+dfsg
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
rm -rf /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man_src/*.html /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man_src/*.?
rm -rf /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man
dh_auto_clean --
make -j4 clean
make[2]: Entering directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule
rm kmer_counter/*.o
rm: cannot remove 'kmer_counter/*.o': No such file or directory
makefile:80: recipe for target 'clean' failed
make[2]: [clean] Error 1 (ignored)
rm kmc_api/*.o
rm: cannot remove 'kmc_api/*.o': No such file or directory
makefile:80: recipe for target 'clean' failed
make[2]: [clean] Error 1 (ignored)
rm kmc_dump/*.o
rm: cannot remove 'kmc_dump/*.o': No such file or directory
makefile:80: recipe for target 'clean' failed
make[2]: [clean] Error 1 (ignored)
rm kmc_tools/*.o
rm: cannot remove 'kmc_tools/*.o': No such file or directory
makefile:80: recipe for target 'clean' failed
make[2]: [clean] Error 1 (ignored)
rm -rf bin
rm -f libkmc.a
make[2]: Leaving directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
make[1]: Leaving directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars debian/files
rm -fr -- debian/kmc/ debian/tmp/ debian/libkmc-dev/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer_counter.cpp -o kmer_counter/kmer_counter.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mmer.cpp -o kmer_counter/mmer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mem_disk_file.cpp -o kmer_counter/mem_disk_file.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/rev_byte.cpp -o kmer_counter/rev_byte.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_writer.cpp -o kmer_counter/bkb_writer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_reader.cpp -o kmer_counter/bkb_reader.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/fastq_reader.cpp -o kmer_counter/fastq_reader.o
kmer_counter/kmer_counter.cpp: In function 'int main(int, char**)':
kmer_counter/kmer_counter.cpp:473:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
kmer_counter/kmer_counter.cpp:475:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
cout << " Total no. of super-k-mers : " << setw(12) << n_total_super_kmers << "\n";
^~~~
In file included from /usr/include/c++/7/map:60:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/bkb_reader.h:15,
from kmer_counter/bkb_reader.cpp:12:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:60:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/bkb_writer.h:14,
from kmer_counter/bkb_writer.cpp:12:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/bkb_reader.h:15,
from kmer_counter/bkb_reader.cpp:12:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CBigKmerBinReader::ProcessBigBin()':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/timer.cpp -o kmer_counter/timer.o
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/bkb_writer.h:14,
from kmer_counter/bkb_writer.cpp:12:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CBigKmerBinWriter::Process()':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/radix.cpp -o kmer_counter/radix.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_completer.cpp -o kmer_counter/kb_completer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_storer.cpp -o kmer_counter/kb_storer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer.cpp -o kmer_counter/kmer.o
In file included from /usr/include/c++/7/map:60:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kb_completer.h:14,
from kmer_counter/kb_completer.cpp:14:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:60:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kb_storer.h:15,
from kmer_counter/kb_storer.cpp:14:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kb_completer.h:14,
from kmer_counter/kb_completer.cpp:14:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinCompleter::ProcessBinsFirstStage()':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/prob_qual.cpp -o kmer_counter/prob_qual.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/nc_utils.cpp -o kmc_dump/nc_utils.o
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kb_storer.h:15,
from kmer_counter/kb_storer.cpp:14:
/usr/include/c++/7/bits/stl_map.h: In member function 'bool CKmerBinStorer::OpenFiles()':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/mmer.cpp -o kmc_api/mmer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/kmc_dump.cpp -o kmc_dump/kmc_dump.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmc_file.cpp -o kmc_api/kmc_file.o
kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::BinarySearch(int64, int64, const CKmerAPI&, uint64&, uint32)':
kmc_api/kmc_file.cpp:1360:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (index_start >= total_kmers)
~~~~~~~~~~~~^~~~~~~~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmer_api.cpp -o kmc_api/kmer_api.o
kmc_api/kmc_file.cpp: In member function 'void CKMCFile::Reload_sufix_file_buf()':
kmc_api/kmc_file.cpp:607:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
fread (sufix_file_buf, 1, (size_t) part_size, file_suf);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::RestartListing()':
kmc_api/kmc_file.cpp:653:9: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
fread (sufix_file_buf, 1, (size_t) part_size, file_suf);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_header.cpp -o kmc_tools/kmc_header.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_tools.cpp -o kmc_tools/kmc_tools.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/nc_utils.cpp -o kmc_tools/nc_utils.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parameters_parser.cpp -o kmc_tools/parameters_parser.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parser.cpp -o kmc_tools/parser.o
In file included from /usr/include/c++/7/vector:69:0,
from kmc_tools/config.h:16,
from kmc_tools/kmc1_db_reader.h:15,
from kmc_tools/expression_node.h:19,
from kmc_tools/parser.h:14,
from kmc_tools/parameters_parser.h:15,
from kmc_tools/parameters_parser.cpp:12:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {CKMC_header}; _Tp = CKMC_header; _Alloc = std::allocator<CKMC_header>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<CKMC_header>::iterator {aka __gnu_cxx::__normal_iterator<CKMC_header*, std::vector<CKMC_header> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'bool CParametersParser::validate_input_dbs()':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<CKMC_header*, std::vector<CKMC_header> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<CKMC_header*, std::vector<CKMC_header> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/tokenizer.cpp -o kmc_tools/tokenizer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_filter.cpp -o kmc_tools/fastq_filter.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_reader.cpp -o kmc_tools/fastq_reader.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_writer.cpp -o kmc_tools/fastq_writer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/percent_progress.cpp -o kmc_tools/percent_progress.o
ar rcs libkmc.a kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o
ranlib libkmc.a
mkdir -p bin
g++ -o bin/kmc_dump kmc_dump/nc_utils.o kmc_api/mmer.o kmc_dump/kmc_dump.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread
In file included from /usr/include/c++/7/vector:69:0,
from kmc_tools/percent_progress.h:15,
from kmc_tools/percent_progress.cpp:12:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, long long unsigned int&}; _Tp = CPercentProgress::CDisplayItem; _Alloc = std::allocator<CPercentProgress::CDisplayItem>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<CPercentProgress::CDisplayItem>::iterator {aka __gnu_cxx::__normal_iterator<CPercentProgress::CDisplayItem*, std::vector<CPercentProgress::CDisplayItem> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'uint32 CPercentProgress::RegisterItem(const string&, uint64)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<CPercentProgress::CDisplayItem*, std::vector<CPercentProgress::CDisplayItem> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int&}; _Tp = CPercentProgress::CDisplayItem; _Alloc = std::allocator<CPercentProgress::CDisplayItem>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<CPercentProgress::CDisplayItem>::iterator {aka __gnu_cxx::__normal_iterator<CPercentProgress::CDisplayItem*, std::vector<CPercentProgress::CDisplayItem> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'uint32 CPercentProgress::RegisterItem(uint64)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<CPercentProgress::CDisplayItem*, std::vector<CPercentProgress::CDisplayItem> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/regex:38,
from kmc_tools/tokenizer.h:16,
from kmc_tools/parser.h:15,
from kmc_tools/kmc_tools.cpp:16:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/7/map:60:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >}' changed in GCC 7.1
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int>; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/vector:69:0,
from kmc_tools/kmc_tools.cpp:13:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple<long long unsigned int, long long unsigned int, bool>}; _Tp = std::tuple<long long unsigned int, long long unsigned int, bool>; _Alloc = std::allocator<std::tuple<long long unsigned int, long long unsigned int, bool> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::tuple<long long unsigned int, long long unsigned int, bool> >::iterator {aka __gnu_cxx::__normal_iterator<std::tuple<long long unsigned int, long long unsigned int, bool>*, std::vector<std::tuple<long long unsigned int, long long unsigned int, bool> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::tuple<long long unsigned int, long long unsigned int, bool>}; _Tp = std::tuple<long long unsigned int, long long unsigned int, bool>; _Alloc = std::allocator<std::tuple<long long unsigned int, long long unsigned int, bool> >]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<long long unsigned int, long long unsigned int, bool>*, std::vector<std::tuple<long long unsigned int, long long unsigned int, bool> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/queue:62:0,
from kmc_tools/queues.h:20,
from kmc_tools/config.h:20,
from kmc_tools/kmc_tools.cpp:15:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/regex:38,
from kmc_tools/tokenizer.h:16,
from kmc_tools/parser.h:15,
from kmc_tools/kmc_tools.cpp:16:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__sort(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~
/usr/include/c++/7/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 8]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_map.h: In static member function 'static bool CSplitter_Impl<true>::ProcessReads(CSplitter<true>&, unsigned char*, uint64)':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 7]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 6]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 5]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 4]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 3]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 1]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from kmer_counter/kmer_counter.cpp:14:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<int, long long int>}; _Tp = std::pair<int, long long int>; _Alloc = std::allocator<std::pair<int, long long int> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<int, long long int> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<CBinDesc::init_random()::<lambda(const std::pair<int, long long int>&, const std::pair<int, long long int>&)> >]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CTools<SIZE>::filter() [with unsigned int SIZE = 2]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long int> >]':
/usr/include/c++/7/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__final_insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >; _Distance = int; _Tp = std::pair<int, long long int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<CBinDesc::init_random()::<lambda(const std::pair<int, long long int>&, const std::pair<int, long long int>&)> >]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<CBinDesc::init_random()::<lambda(const std::pair<int, long long int>&, const std::pair<int, long long int>&)> >]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from kmer_counter/kmer_counter.cpp:14:
/usr/include/c++/7/bits/vector.tcc: In member function 'void CBinDesc::init_random()':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, long long int>*, std::vector<std::pair<int, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<8>; unsigned int SIZE = 8]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<8>; unsigned int SIZE = 8]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In function 'void CBigBinDesc::push(int32, int32, uint32, uint32, FILE*, std::__cxx11::string, uint64)':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<unsigned int, unsigned int, _IO_FILE*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<7>; unsigned int SIZE = 7]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<7>; unsigned int SIZE = 7]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long int> >]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long int> >]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long int> >]':
/usr/include/c++/7/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__sort(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~
/usr/include/c++/7/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__final_insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<8>; unsigned int SIZE = 8; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<7>; unsigned int SIZE = 7; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<6>; unsigned int SIZE = 6; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<5>; unsigned int SIZE = 5; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<8>; unsigned int SIZE = 8; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<7>; unsigned int SIZE = 7; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<6>; unsigned int SIZE = 6; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<5>; unsigned int SIZE = 5; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<4>; unsigned int SIZE = 4; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mkdir -p bin
g++ -o bin/kmc_tools kmc_tools/kmc_header.o kmc_tools/kmc_tools.o kmc_tools/nc_utils.o kmc_tools/parameters_parser.o kmc_tools/parser.o kmc_tools/tokenizer.o kmc_tools/fastq_filter.o kmc_tools/fastq_reader.o kmc_tools/fastq_writer.o kmc_tools/percent_progress.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<4>; unsigned int SIZE = 4; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<6>; unsigned int SIZE = 6]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<3>; unsigned int SIZE = 3; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<6>; unsigned int SIZE = 6]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<3>; unsigned int SIZE = 3; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<std::greater<long long unsigned int> >]':
/usr/include/c++/7/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__sort(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~
/usr/include/c++/7/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__final_insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<1>; unsigned int SIZE = 1; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<2>; unsigned int SIZE = 2; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<3>; unsigned int SIZE = 3; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<4>; unsigned int SIZE = 4; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<5>; unsigned int SIZE = 5; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<6>; unsigned int SIZE = 6; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<7>; unsigned int SIZE = 7; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmerQuake<8>; unsigned int SIZE = 8; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<2>; unsigned int SIZE = 2; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<3>; unsigned int SIZE = 3; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<4>; unsigned int SIZE = 4; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<5>; unsigned int SIZE = 5; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<6>; unsigned int SIZE = 6; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<7>; unsigned int SIZE = 7; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<8>; unsigned int SIZE = 8; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<5>; unsigned int SIZE = 5]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<2>; unsigned int SIZE = 2; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void CKMC<KMER_T, SIZE, QUAKE_MODE>::SetThreads1Stage() [with KMER_T = CKmer<1>; unsigned int SIZE = 1; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<5>; unsigned int SIZE = 5]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<2>; unsigned int SIZE = 2; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<4>; unsigned int SIZE = 4]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmerQuake<1>; unsigned int SIZE = 1; bool QUAKE_MODE = true]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<4>; unsigned int SIZE = 4]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /usr/include/c++/7/ext/algorithm:61,
from kmer_counter/defs.h:125,
from kmer_counter/kmc.h:14,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_algo.h: In member function 'bool CKMC<KMER_T, SIZE, QUAKE_MODE>::Process() [with KMER_T = CKmer<1>; unsigned int SIZE = 1; bool QUAKE_MODE = false]':
/usr/include/c++/7/bits/stl_algo.h:4868:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp));
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from kmer_counter/queues.h:20,
from kmer_counter/params.h:15,
from kmer_counter/kmc.h:15,
from kmer_counter/kmer_counter.cpp:18:
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<3>; unsigned int SIZE = 3]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<3>; unsigned int SIZE = 3]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<2>; unsigned int SIZE = 2]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<2>; unsigned int SIZE = 2]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmerQuake<1>; unsigned int SIZE = 1]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h: In member function 'void CKmerBinReader<KMER_T, SIZE>::ProcessBins() [with KMER_T = CKmer<1>; unsigned int SIZE = 1]':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less<int>, std::allocator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
mkdir -p bin
g++ -o bin/kmc kmer_counter/kmer_counter.o kmer_counter/mmer.o kmer_counter/mem_disk_file.o kmer_counter/rev_byte.o kmer_counter/bkb_writer.o kmer_counter/bkb_reader.o kmer_counter/fastq_reader.o kmer_counter/timer.o kmer_counter/radix.o kmer_counter/kb_completer.o kmer_counter/kb_storer.o kmer_counter/kmer.o kmer_counter/prob_qual.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread
make[1]: Leaving directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars
rm -fr -- debian/.debhelper/generated/kmc/ debian/kmc/ debian/tmp/ debian/.debhelper/generated/libkmc-dev/ debian/libkmc-dev/
dh_auto_install -a
install -d /<<BUILDDIR>>/kmc-2.3\+dfsg/debian/tmp
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
dh_install
install -d debian/kmc//bin
cp --reflink=auto -a ./bin/kmc ./bin/kmc_dump ./bin/kmc_tools debian/kmc//bin/
install -d debian/.debhelper/generated/kmc
install -d debian/libkmc-dev/usr/include/kmc
cp --reflink=auto -a ./kmc_api/kmc_file.h ./kmc_api/kmer_api.h ./kmc_api/kmer_defs.h ./kmc_api/mmer.h ./kmc_api/stdafx.h debian/libkmc-dev/usr/include/kmc/
install -d debian/libkmc-dev/usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a ./libkmc.a debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/
install -d debian/.debhelper/generated/libkmc-dev
make[1]: Leaving directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
dh_installdocs -a
install -d debian/kmc/usr/share/doc/kmc
install -p -m0644 debian/copyright debian/kmc/usr/share/doc/kmc/copyright
install -d debian/libkmc-dev/usr/share/doc/libkmc-dev
install -p -m0644 debian/copyright debian/libkmc-dev/usr/share/doc/libkmc-dev/copyright
dh_installchangelogs -a
install -p -m0644 debian/changelog debian/libkmc-dev/usr/share/doc/libkmc-dev/changelog.Debian
install -p -m0644 debian/changelog debian/kmc/usr/share/doc/kmc/changelog.Debian
rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log
debian/rules override_dh_installman
make[1]: Entering directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
mkdir -p /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man
/<<BUILDDIR>>/kmc-2.3+dfsg/debian/usage_to_man
Can't exec "1": No such file or directory at /<<BUILDDIR>>/kmc-2.3+dfsg/debian/usage_to_man line 19.
Creating manpages
Manpage creation complete
Manpage creation complete
asciidoctor -a docdate='' -b manpage /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man_src/*.adoc
cp /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man_src/*.? /<<BUILDDIR>>/kmc-2.3+dfsg/debian/man
dh_installman --
install -d debian/kmc/usr/share/man/man1/
install -p -m0644 ./man/kmc.1 debian/kmc/usr/share/man/man1/kmc.1
install -p -m0644 ./man/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_dump.1
install -p -m0644 ./debian/man/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1
install -p -m0644 ./debian/man/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1
install -p -m0644 ./debian/man/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1
install -p -m0644 ./debian/man/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1
install -p -m0644 ./debian/man/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1
install -p -m0644 ./debian/man/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1
install -p -m0644 ./debian/man/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1
install -p -m0644 ./debian/man/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1
install -p -m0644 ./debian/man/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1
install -p -m0644 ./debian/man/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1
install -p -m0644 ./debian/man/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 > debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools.1 > debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-union.1 > debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc.1 > debian/kmc/usr/share/man/man1/kmc.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-intersect.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-sort.1 > debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-union.1
chmod 0644 -- debian/kmc/usr/share/man/man1/kmc_tools-union.1
mv debian/kmc/usr/share/man/man1/kmc.1.dh-new debian/kmc/usr/share/man/man1/kmc.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 > debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_dump.1 > debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-sort.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-complex.1 > debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_dump.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-filter.1 > debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-complex.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-compact.1 > debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 > debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-filter.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 > debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-compact.1
chmod 0644 -- debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1
mv debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-histogram.1
man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-dump.1 > debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new
mv debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1
chmod 0644 -- debian/kmc/usr/share/man/man1/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1
mv debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-dump.1
chmod 0644 -- debian/kmc/usr/share/man/man1/kmc.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1
make[1]: Leaving directory '/<<BUILDDIR>>/kmc-2.3+dfsg'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
Using 1531337703 as canonical time
Normalizing debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/libkmc.a using File::StripNondeterminism::handlers::ar
dh_compress -a
cd debian/kmc
cd debian/libkmc-dev
chmod a-x usr/share/doc/libkmc-dev/changelog.Debian
chmod a-x usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1
gzip -9nf usr/share/doc/libkmc-dev/changelog.Debian
gzip -9nf usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1
cd '/<<BUILDDIR>>/kmc-2.3+dfsg'
cd '/<<BUILDDIR>>/kmc-2.3+dfsg'
dh_fixperms -a
find debian/kmc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libkmc-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libkmc-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/kmc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libkmc-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libkmc-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/usr/share/doc -type f -a -true -a ! -regex 'debian/kmc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/kmc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libkmc-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/libkmc-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a
dh_strip -a
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/libkmc.a
install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/43
objcopy --only-keep-debug --compress-debug-sections debian/kmc/bin/kmc_dump debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/43/325ef8fe1dc65f2eb15deadef87134a2cf369c.debug
chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/43/325ef8fe1dc65f2eb15deadef87134a2cf369c.debug
chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/43/325ef8fe1dc65f2eb15deadef87134a2cf369c.debug
strip --remove-section=.comment --remove-section=.note debian/kmc/bin/kmc_dump
objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/43/325ef8fe1dc65f2eb15deadef87134a2cf369c.debug debian/kmc/bin/kmc_dump
install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/59
objcopy --only-keep-debug --compress-debug-sections debian/kmc/bin/kmc_tools debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/59/f9863c3a284c802eb7bac7a4c8157823dca188.debug
chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/59/f9863c3a284c802eb7bac7a4c8157823dca188.debug
chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/59/f9863c3a284c802eb7bac7a4c8157823dca188.debug
strip --remove-section=.comment --remove-section=.note debian/kmc/bin/kmc_tools
objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/59/f9863c3a284c802eb7bac7a4c8157823dca188.debug debian/kmc/bin/kmc_tools
install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/50
objcopy --only-keep-debug --compress-debug-sections debian/kmc/bin/kmc debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/50/d7b1b3cf9164403eb5d571235a39b55b15bed4.debug
chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/50/d7b1b3cf9164403eb5d571235a39b55b15bed4.debug
chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/50/d7b1b3cf9164403eb5d571235a39b55b15bed4.debug
strip --remove-section=.comment --remove-section=.note debian/kmc/bin/kmc
objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/50/d7b1b3cf9164403eb5d571235a39b55b15bed4.debug debian/kmc/bin/kmc
install -d debian/.debhelper/kmc/dbgsym-root/usr/share/doc
ln -s kmc debian/.debhelper/kmc/dbgsym-root/usr/share/doc/kmc-dbgsym
dh_makeshlibs -a
rm -f debian/kmc/DEBIAN/shlibs
rm -f debian/libkmc-dev/DEBIAN/shlibs
dh_shlibdeps -a
install -d debian/kmc/DEBIAN
dpkg-shlibdeps -Tdebian/kmc.substvars debian/kmc/bin/kmc_dump debian/kmc/bin/kmc_tools debian/kmc/bin/kmc
dpkg-shlibdeps: warning: debian/kmc/bin/kmc_dump contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/kmc/bin/kmc contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/kmc/bin/kmc_tools contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/kmc/bin/kmc_dump debian/kmc/bin/kmc debian/kmc/bin/kmc_tools were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a
install -d debian/libkmc-dev/DEBIAN
dh_gencontrol -a
echo misc:Depends= >> debian/libkmc-dev.substvars
echo misc:Pre-Depends= >> debian/libkmc-dev.substvars
dpkg-gencontrol -plibkmc-dev -ldebian/changelog -Tdebian/libkmc-dev.substvars -Pdebian/libkmc-dev -UMulti-Arch
echo misc:Depends= >> debian/kmc.substvars
echo misc:Pre-Depends= >> debian/kmc.substvars
install -d debian/.debhelper/kmc/dbgsym-root/DEBIAN
dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/.debhelper/kmc/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=kmc-dbgsym "-DDepends=kmc (= \${binary:Version})" "-DDescription=debug symbols for kmc" "-DBuild-Ids=43325ef8fe1dc65f2eb15deadef87134a2cf369c 50d7b1b3cf9164403eb5d571235a39b55b15bed4 59f9863c3a284c802eb7bac7a4c8157823dca188" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: Depends field of package libkmc-dev: unknown substitution variable ${shlibs:Depends}
chmod 0644 -- debian/libkmc-dev/DEBIAN/control
chown 0:0 -- debian/libkmc-dev/DEBIAN/control
chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control
chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control
dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/kmc -UMulti-Arch
chmod 0644 -- debian/kmc/DEBIAN/control
chown 0:0 -- debian/kmc/DEBIAN/control
dh_md5sums -a
(cd debian/kmc >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
(cd debian/libkmc-dev >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
chmod 0644 -- debian/libkmc-dev/DEBIAN/md5sums
chown 0:0 -- debian/libkmc-dev/DEBIAN/md5sums
chmod 0644 -- debian/kmc/DEBIAN/md5sums
chown 0:0 -- debian/kmc/DEBIAN/md5sums
(cd debian/.debhelper/kmc/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums
chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a
dpkg-deb --build debian/kmc ..
dpkg-deb --build debian/.debhelper/kmc/dbgsym-root ..
dpkg-deb --build debian/libkmc-dev ..
dpkg-deb: building package 'kmc-dbgsym' in '../kmc-dbgsym_2.3+dfsg-6_armhf.deb'.
dpkg-deb: building package 'libkmc-dev' in '../libkmc-dev_2.3+dfsg-6_armhf.deb'.
dpkg-deb: building package 'kmc' in '../kmc_2.3+dfsg-6_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../kmc_2.3+dfsg-6_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build kmc-2.3+dfsg
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-07-14T05:32:36Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
kmc_2.3+dfsg-6_armhf.changes:
-----------------------------
Format: 1.8
Date: Wed, 11 Jul 2018 21:35:03 +0200
Source: kmc
Binary: kmc libkmc-dev
Architecture: armhf
Version: 2.3+dfsg-6
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
kmc - count kmers in genomic sequences
libkmc-dev - library to access KMC k-mer count files
Changes:
kmc (2.3+dfsg-6) unstable; urgency=medium
.
* Drop unneeded get-orig-source target
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
* Drop unnecessary Testsuite: autopkgtest
* Do not parse d/changelog
* Fix spelling
Checksums-Sha1:
4ce0019eeeac2b50d0ea1d8870718c63754d17f2 6963344 kmc-dbgsym_2.3+dfsg-6_armhf.deb
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96cf7adcca0a487360c41d9d13fe3c2dfd4c9e02 26384 libkmc-dev_2.3+dfsg-6_armhf.deb
Checksums-Sha256:
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Files:
606ff8f92ad87c991fb407331c291691 6963344 debug optional kmc-dbgsym_2.3+dfsg-6_armhf.deb
c5c561b96a91dc2657f52317112aa707 6551 science optional kmc_2.3+dfsg-6_armhf.buildinfo
fa4781a1248ba23e6760f48653b2a48d 446784 science optional kmc_2.3+dfsg-6_armhf.deb
c318d7941ca0b30919dcdddcda4a9581 26384 libdevel optional libkmc-dev_2.3+dfsg-6_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
kmc-dbgsym_2.3+dfsg-6_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 6963344 bytes: control archive=652 bytes.
443 bytes, 12 lines control
318 bytes, 3 lines md5sums
Package: kmc-dbgsym
Source: kmc
Version: 2.3+dfsg-6
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 7358
Depends: kmc (= 2.3+dfsg-6)
Section: debug
Priority: optional
Description: debug symbols for kmc
Build-Ids: 43325ef8fe1dc65f2eb15deadef87134a2cf369c 50d7b1b3cf9164403eb5d571235a39b55b15bed4 59f9863c3a284c802eb7bac7a4c8157823dca188
drwxr-xr-x root/root 0 2018-07-11 19:35 ./
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/debug/.build-id/43/
-rw-r--r-- root/root 157960 2018-07-11 19:35 ./usr/lib/debug/.build-id/43/325ef8fe1dc65f2eb15deadef87134a2cf369c.debug
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/debug/.build-id/50/
-rw-r--r-- root/root 4143860 2018-07-11 19:35 ./usr/lib/debug/.build-id/50/d7b1b3cf9164403eb5d571235a39b55b15bed4.debug
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/debug/.build-id/59/
-rw-r--r-- root/root 3218568 2018-07-11 19:35 ./usr/lib/debug/.build-id/59/f9863c3a284c802eb7bac7a4c8157823dca188.debug
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-07-11 19:35 ./usr/share/doc/kmc-dbgsym -> kmc
kmc_2.3+dfsg-6_armhf.deb
------------------------
new Debian package, version 2.0.
size 446784 bytes: control archive=1696 bytes.
1608 bytes, 31 lines control
1240 bytes, 18 lines md5sums
Package: kmc
Version: 2.3+dfsg-6
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1922
Depends: libbz2-1.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 6), zlib1g (>= 1:1.2.6)
Section: science
Priority: optional
Homepage: http://sun.aei.polsl.pl/kmc
Description: count kmers in genomic sequences
The kmc software is designed for counting k-mers (sequences of
consecutive k symbols) in a set of reads. K-mer counting is
important for many bioinformatics applications, e.g. developing de Bruijn
graph assemblers.
.
Building de Bruijn graphs is a commonly used approach for genome
assembly with data from second-generation sequencing.
Unfortunately, sequencing errors (frequent in practice)
result in huge memory requirements for de Bruijn graphs, as well
as long build time. One of the popular approaches to handle this
problem is filtering the input reads in such a way that unique k-mers
(very likely obtained as a result of an error) are discarded.
.
Thus, KMC scans the raw reads and produces a compact representation
of all non-unique reads accompanied with number of their occurrences.
The algorithm implemented in KMC makes use mostly of disk space rather
than RAM, which allows one to use KMC even on rather typical personal
computers. When run on high-end servers (what is necessary for KMC
competitors) it outperforms them in both memory requirements and
speed of computation. The disk space necessary for computation is in
order of the size of input data (usually it is smaller).
drwxr-xr-x root/root 0 2018-07-11 19:35 ./
drwxr-xr-x root/root 0 2018-07-11 19:35 ./bin/
-rwxr-xr-x root/root 1268832 2018-07-11 19:35 ./bin/kmc
-rwxr-xr-x root/root 42808 2018-07-11 19:35 ./bin/kmc_dump
-rwxr-xr-x root/root 624960 2018-07-11 19:35 ./bin/kmc_tools
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/doc/kmc/
-rw-r--r-- root/root 955 2018-07-11 19:35 ./usr/share/doc/kmc/changelog.Debian.gz
-rw-r--r-- root/root 1210 2018-07-11 19:35 ./usr/share/doc/kmc/copyright
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/man/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/man/man1/
-rw-r--r-- root/root 1134 2018-07-11 19:35 ./usr/share/man/man1/kmc.1.gz
-rw-r--r-- root/root 614 2018-07-11 19:35 ./usr/share/man/man1/kmc_dump.1.gz
-rw-r--r-- root/root 833 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-compact.1.gz
-rw-r--r-- root/root 1314 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-complex.1.gz
-rw-r--r-- root/root 1011 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-counters_subtract.1.gz
-rw-r--r-- root/root 859 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-dump.1.gz
-rw-r--r-- root/root 1026 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-filter.1.gz
-rw-r--r-- root/root 823 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-histogram.1.gz
-rw-r--r-- root/root 968 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-intersect.1.gz
-rw-r--r-- root/root 972 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-kmers_subtract.1.gz
-rw-r--r-- root/root 879 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-sort.1.gz
-rw-r--r-- root/root 952 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools-union.1.gz
-rw-r--r-- root/root 1208 2018-07-11 19:35 ./usr/share/man/man1/kmc_tools.1.gz
libkmc-dev_2.3+dfsg-6_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 26384 bytes: control archive=940 bytes.
614 bytes, 17 lines control
519 bytes, 8 lines md5sums
Package: libkmc-dev
Source: kmc
Version: 2.3+dfsg-6
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 92
Section: libdevel
Priority: optional
Homepage: http://sun.aei.polsl.pl/kmc
Description: library to access KMC k-mer count files
The kmc software is designed for counting k-mers (sequences of
consecutive k symbols) in a set of reads. K-mer counting is
important for many bioinformatics applications, e.g. developing de Bruijn
graph assemblers.
.
This package contains the C++ library headers for accessing kmc's output
file format.
drwxr-xr-x root/root 0 2018-07-11 19:35 ./
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/include/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/include/kmc/
-rw-r--r-- root/root 5781 2015-09-10 15:25 ./usr/include/kmc/kmc_file.h
-rw-r--r-- root/root 18341 2015-09-10 15:25 ./usr/include/kmc/kmer_api.h
-rw-r--r-- root/root 1022 2015-09-10 15:25 ./usr/include/kmc/kmer_defs.h
-rw-r--r-- root/root 4163 2015-09-10 15:25 ./usr/include/kmc/mmer.h
-rw-r--r-- root/root 85 2015-09-10 15:25 ./usr/include/kmc/stdafx.h
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 48600 2018-07-11 19:35 ./usr/lib/arm-linux-gnueabihf/libkmc.a
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-07-11 19:35 ./usr/share/doc/libkmc-dev/
-rw-r--r-- root/root 955 2018-07-11 19:35 ./usr/share/doc/libkmc-dev/changelog.Debian.gz
-rw-r--r-- root/root 1210 2018-07-11 19:35 ./usr/share/doc/libkmc-dev/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 82356
Build-Time: 230
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 207
Job: kmc_2.3+dfsg-6
Machine Architecture: armhf
Package: kmc
Package-Time: 455
Source-Version: 2.3+dfsg-6
Space: 82356
Status: successful
Version: 2.3+dfsg-6
--------------------------------------------------------------------------------
Finished at 2018-07-14T05:32:36Z
Build needed 00:07:35, 82356k disk space