kmc →
2.3+dfsg-1 →
armhf → 2016-01-10 11:30:26
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on testbuildd.raspbian.org
╔══════════════════════════════════════════════════════════════════════════════╗
║ kmc 2.3+dfsg-1 (armhf) 10 Jan 2016 11:01 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: kmc
Version: 2.3+dfsg-1
Source Version: 2.3+dfsg-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/kmc-T0rFrv/kmc-2.3+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/kmc-T0rFrv' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-24440408-bb48-49c1-afb1-d8cba97a522e' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8593 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.6 MB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
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Checking available source versions...
Download source files with APT
──────────────────────────────
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'kmc' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/kmc.git
Please use:
git clone git://anonscm.debian.org/debian-med/kmc.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 162 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main kmc 2.3+dfsg-1 (dsc) [2124 B]
Get:2 http://172.17.0.1/private stretch-staging/main kmc 2.3+dfsg-1 (tar) [129 kB]
Get:3 http://172.17.0.1/private stretch-staging/main kmc 2.3+dfsg-1 (diff) [30.8 kB]
Fetched 162 kB in 0s (1273 kB/s)
Download complete and in download only mode
Check architectures
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Check dependencies
──────────────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-UlAADw/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ Sources [208 B]
Get:5 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ Packages [529 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 6 not upgraded.
Need to get 0 B/768 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/«BUILDDIR»/resolver-UlAADw/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [768 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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(Reading database ... 12745 files and directories currently installed.)
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-exec, zlib1g-dev, libbz2-dev, help2man, ruby-ronn, d-shlibs
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-exec, zlib1g-dev, libbz2-dev, help2man, ruby-ronn, d-shlibs
dpkg-deb: building package 'sbuild-build-depends-kmc-dummy' in '/«BUILDDIR»/resolver-UPxxin/apt_archive/sbuild-build-depends-kmc-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ Sources [346 B]
Get:5 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ Packages [604 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install kmc build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
bsdmainutils ca-certificates d-shlibs debhelper dh-exec
dh-strip-nondeterminism file gettext gettext-base groff-base help2man
intltool-debian libarchive-zip-perl libbz2-dev libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu55
liblocale-gettext-perl libmagic1 libmarkdown2 libpipeline1 libruby2.2
libssl1.0.2 libtimedate-perl libunistring0 libxml2 libyaml-0-2 man-db
openssl po-debconf ruby ruby-fast-xs ruby-hpricot ruby-minitest
ruby-mustache ruby-power-assert ruby-rdiscount ruby-ronn ruby-test-unit
ruby2.2 rubygems-integration zlib1g-dev
Suggested packages:
wamerican | wordlist whois vacation dh-make gettext-doc autopoint
libasprintf-dev libgettextpo-dev groff less www-browser libmail-box-perl ri
ruby-dev bundler
Recommended packages:
curl | wget | lynx-cur bzip2-doc libglib2.0-data shared-mime-info
xdg-user-dirs xml-core libmail-sendmail-perl libjs-jquery fonts-lato
The following NEW packages will be installed:
bsdmainutils ca-certificates d-shlibs debhelper dh-exec
dh-strip-nondeterminism file gettext gettext-base groff-base help2man
intltool-debian libarchive-zip-perl libbz2-dev libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu55
liblocale-gettext-perl libmagic1 libmarkdown2 libpipeline1 libruby2.2
libssl1.0.2 libtimedate-perl libunistring0 libxml2 libyaml-0-2 man-db
openssl po-debconf ruby ruby-fast-xs ruby-hpricot ruby-minitest
ruby-mustache ruby-power-assert ruby-rdiscount ruby-ronn ruby-test-unit
ruby2.2 rubygems-integration sbuild-build-depends-kmc-dummy zlib1g-dev
0 upgraded, 45 newly installed, 0 to remove and 6 not upgraded.
Need to get 22.0 MB/22.0 MB of archives.
After this operation, 77.5 MB of additional disk space will be used.
Get:1 file:/«BUILDDIR»/resolver-UPxxin/apt_archive ./ sbuild-build-depends-kmc-dummy 0.invalid.0 [842 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf liblocale-gettext-perl armhf 1.07-1+b1 [18.0 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-5 [1083 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-1 [23.9 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libmarkdown2 armhf 2.1.8-2 [27.7 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf libyaml-0-2 armhf 0.1.6-3 [41.5 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2e-1 [883 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf openssl armhf 1.0.2e-1 [662 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf ca-certificates all 20160104 [200 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf d-shlibs all 0.62 [16.9 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.18 [248 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.56-2 [94.9 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.014-1 [10.6 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.014-1 [7472 B]
Get:29 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20151225 [830 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf help2man armhf 1.47.3 [154 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libbz2-dev armhf 1.0.6-8 [27.8 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf rubygems-integration all 1.10 [4882 B]
Get:33 http://172.17.0.1/private stretch-staging/main armhf ruby-power-assert all 0.2.6-1 [7384 B]
Get:34 http://172.17.0.1/private stretch-staging/main armhf ruby-test-unit all 3.1.5-1 [68.6 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf ruby-minitest all 5.8.3-1 [49.9 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libruby2.2 armhf 2.2.3-2 [2842 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf ruby2.2 armhf 2.2.3-2 [218 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf ruby all 1:2.2.4 [9798 B]
Get:39 http://172.17.0.1/private stretch-staging/main armhf ruby-fast-xs armhf 0.8.0-3+b3 [8500 B]
Get:40 http://172.17.0.1/private stretch-staging/main armhf ruby-hpricot armhf 0.8.6-5+b2 [65.8 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf ruby-mustache all 1.0.2-1 [25.1 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf ruby-rdiscount armhf 2.1.8-1 [32.7 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf ruby-ronn all 0.7.3-3 [29.4 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf dh-exec armhf 0.23 [24.9 kB]
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Processing triggers for libc-bin (2.21-6) ...
Setting up liblocale-gettext-perl (1.07-1+b1) ...
Setting up groff-base (1.22.3-5) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-1) ...
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Not building database; man-db/auto-update is not 'true'.
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Setting up libyaml-0-2:armhf (0.1.6-3) ...
Setting up libssl1.0.2:armhf (1.0.2e-1) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.7-2) ...
Setting up libicu55:armhf (55.1-7) ...
Setting up libxml2:armhf (2.9.3+dfsg1-1) ...
Setting up openssl (1.0.2e-1) ...
Setting up ca-certificates (20160104) ...
Setting up d-shlibs (0.62) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up libglib2.0-0:armhf (2.46.2-3) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up gettext (0.19.7-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.18) ...
Setting up libarchive-zip-perl (1.56-2) ...
Setting up libfile-stripnondeterminism-perl (0.014-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up help2man (1.47.3) ...
Setting up libbz2-dev:armhf (1.0.6-8) ...
Setting up rubygems-integration (1.10) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up dh-strip-nondeterminism (0.014-1) ...
Setting up debhelper (9.20151225) ...
Setting up ruby2.2 (2.2.3-2) ...
Setting up ruby (1:2.2.4) ...
Setting up ruby-mustache (1.0.2-1) ...
Setting up dh-exec (0.23) ...
Setting up ruby-power-assert (0.2.6-1) ...
Setting up ruby-minitest (5.8.3-1) ...
Setting up ruby-test-unit (3.1.5-1) ...
Setting up libruby2.2:armhf (2.2.3-2) ...
Setting up ruby-fast-xs (0.8.0-3+b3) ...
Setting up ruby-hpricot (0.8.6-5+b2) ...
Setting up ruby-rdiscount (2.1.8-1) ...
Setting up ruby-ronn (0.7.3-3) ...
Setting up sbuild-build-depends-kmc-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.21-6) ...
Processing triggers for ca-certificates (20160104) ...
Updating certificates in /etc/ssl/certs...
173 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.90.20151209-1 dpkg-dev_1.18.4 g++-5_5.3.1-4+rpi1 gcc-5_5.3.1-4+rpi1 libc6-dev_2.21-6 libstdc++-5-dev_5.3.1-4+rpi1 libstdc++6_5.3.1-4+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.113+nmu3 apt_1.1.5 base-files_9.4+rpi1 base-passwd_3.5.38 bash_4.3-14 binutils_2.25.90.20151209-1 bsdmainutils_9.0.6 bsdutils_1:2.27.1-1 build-essential_11.7 bzip2_1.0.6-8 ca-certificates_20160104 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-4+rpi1 d-shlibs_0.62 dash_0.5.7-4 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20151225 debianutils_4.5.1 dh-exec_0.23 dh-strip-nondeterminism_0.014-1 diffutils_1:3.3-3 dmsetup_2:1.02.114-1 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-10 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-4+rpi1 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-3 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-4+rpi1 gcc-5-base_5.3.1-4+rpi1 gettext_0.19.7-2 gettext-base_0.19.7-2 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-5 gzip_1.6-4 help2man_1.47.3 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-4+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.10-2+b2 libapt-pkg4.16_1.0.10.2 libapt-pkg5.0_1.1.5 libarchive-zip-perl_1.56-2 libasan2_5.3.1-4+rpi1 libatomic1_5.3.1-4+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libblkid1_2.27.1-1 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.21-6 libc-dev-bin_2.21-6 libc6_2.21-6 libc6-dev_2.21-6 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-4+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.6.6-5 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.201 libdevmapper1.02.1_2:1.02.114-1 libdpkg-perl_1.18.4 libdrm2_2.4.65-3 libfakeroot_1.20.2-1 libfdisk1_2.27.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.014-1 libgc1c2_1:7.4.2-7.3 libgcc-5-dev_5.3.1-4+rpi1 libgcc1_1:5.3.1-4+rpi1 libgcrypt20_1.6.4-4 libgdbm3_1.8.3-13.1 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgomp1_5.3.1-4+rpi1 libgpg-error0_1.21-1 libicu55_55.1-7 libisl13_0.14-2 libisl15_0.15-3 libklibc_2.0.4-4+rpi1 libkmod2_21-1 liblocale-gettext-perl_1.07-1+b1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmarkdown2_2.1.8-2 libmount1_2.27.1-1 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_2:8.35-8 libperl5.22_5.22.1-3 libpipeline1_1.4.1-1 libpng12-0_1.2.54-1 libprocps4_2:3.3.10-2 libreadline6_6.3-8+b3 libruby2.2_2.2.3-2 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libsmartcols1_2.27.1-1 libss2_1.42.13-1 libssl1.0.2_1.0.2e-1 libstdc++-5-dev_5.3.1-4+rpi1 libstdc++6_5.3.1-4+rpi1 libsystemd0_228-2 libtext-charwidth-perl_0.04-7+b6 libtext-iconv-perl_1.7-5+b7 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-4+rpi1 libudev1_228-2 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1 libxml2_2.9.3+dfsg1-1 libyaml-0-2_0.1.6-3 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.5-1 manpages_3.74-1 mawk_1.3.3-17 mount_2.27.1-1 multiarch-support_2.21-6 nano_2.4.2-1 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 openssl_1.0.2e-1 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-3 perl-base_5.22.1-3 perl-modules-5.22_5.22.1-3 po-debconf_1.0.18 procps_2:3.3.10-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 ruby_1:2.2.4 ruby-fast-xs_0.8.0-3+b3 ruby-hpricot_0.8.6-5+b2 ruby-minitest_5.8.3-1 ruby-mustache_1.0.2-1 ruby-power-assert_0.2.6-1 ruby-rdiscount_2.1.8-1 ruby-ronn_0.7.3-3 ruby-test-unit_3.1.5-1 ruby2.2_2.2.3-2 rubygems-integration_1.10 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-kmc-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-2 systemd-sysv_228-2 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2015g-1 udev_228-2 util-linux_2.27.1-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Fri Dec 25 11:25:13 2015 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./kmc_2.3+dfsg-1.dsc
dpkg-source: info: extracting kmc in kmc-2.3+dfsg
dpkg-source: info: unpacking kmc_2.3+dfsg.orig.tar.gz
dpkg-source: info: unpacking kmc_2.3+dfsg-1.debian.tar.xz
dpkg-source: info: applying disable-asmlib
dpkg-source: info: applying use-shared-libs
dpkg-source: info: applying hardening
dpkg-source: info: applying 0005-Add-static-library-target-to-makefile.patch
dpkg-source: info: applying 0007-Use-standard-compiler-environment-variables.patch
dpkg-source: info: applying spelling
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-24440408-bb48-49c1-afb1-d8cba97a522e
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package kmc
dpkg-buildpackage: source version 2.3+dfsg-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build kmc-2.3+dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel
dh_testdir -O--parallel
debian/rules override_dh_auto_clean
make[1]: Entering directory '/«BUILDDIR»/kmc-2.3+dfsg'
rm -rf /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/*.html /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/*.?
rm -rf /«BUILDDIR»/kmc-2.3+dfsg/debian/man
dh_auto_clean --
make -j4 clean
make[2]: Entering directory '/«BUILDDIR»/kmc-2.3+dfsg'
makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule
rm kmer_counter/*.o
rm: cannot remove 'kmer_counter/*.o': No such file or directory
makefile:80: recipe for target 'clean' failed
make[2]: [clean] Error 1 (ignored)
rm kmc_api/*.o
rm: cannot remove 'kmc_api/*.o': No such file or directory
make[2]: [clean] Error 1 (ignored)
makefile:80: recipe for target 'clean' failed
rm kmc_dump/*.o
rm: cannot remove 'kmc_dump/*.o': No such file or directory
make[2]: [clean] Error 1 (ignored)
makefile:80: recipe for target 'clean' failed
rm kmc_tools/*.o
rm: cannot remove 'kmc_tools/*.o': No such file or directory
make[2]: [clean] Error 1 (ignored)
makefile:80: recipe for target 'clean' failed
rm -rf bin
rm -f libkmc.a
make[2]: Leaving directory '/«BUILDDIR»/kmc-2.3+dfsg'
make[1]: Leaving directory '/«BUILDDIR»/kmc-2.3+dfsg'
dh_clean -O--parallel
rm -f debian/kmc.substvars
rm -f debian/kmc.*.debhelper
rm -rf debian/kmc/
rm -f debian/libkmc-dev.substvars
rm -f debian/libkmc-dev.*.debhelper
rm -rf debian/libkmc-dev/
rm -rf debian/.debhelper/
rm -f debian/*.debhelper.log
rm -f debian/files
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
rm -f *-stamp
debian/rules build-arch
dh build-arch --parallel
dh_testdir -a -O--parallel
dh_auto_configure -a -O--parallel
dh_auto_build -a -O--parallel
make -j4
makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule
make[1]: Entering directory '/«BUILDDIR»/kmc-2.3+dfsg'
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer_counter.cpp -o kmer_counter/kmer_counter.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mmer.cpp -o kmer_counter/mmer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mem_disk_file.cpp -o kmer_counter/mem_disk_file.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/rev_byte.cpp -o kmer_counter/rev_byte.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_writer.cpp -o kmer_counter/bkb_writer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_reader.cpp -o kmer_counter/bkb_reader.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/fastq_reader.cpp -o kmer_counter/fastq_reader.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/timer.cpp -o kmer_counter/timer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/radix.cpp -o kmer_counter/radix.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_completer.cpp -o kmer_counter/kb_completer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_storer.cpp -o kmer_counter/kb_storer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer.cpp -o kmer_counter/kmer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/prob_qual.cpp -o kmer_counter/prob_qual.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/nc_utils.cpp -o kmc_dump/nc_utils.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/mmer.cpp -o kmc_api/mmer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/kmc_dump.cpp -o kmc_dump/kmc_dump.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmc_file.cpp -o kmc_api/kmc_file.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmer_api.cpp -o kmc_api/kmer_api.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_header.cpp -o kmc_tools/kmc_header.o
kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::BinarySearch(int64, int64, const CKmerAPI&, uint64&, uint32)':
kmc_api/kmc_file.cpp:1360:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (index_start >= total_kmers)
^
kmc_api/kmc_file.cpp: In member function 'void CKMCFile::Reload_sufix_file_buf()':
kmc_api/kmc_file.cpp:607:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
fread (sufix_file_buf, 1, (size_t) part_size, file_suf);
^
kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::RestartListing()':
kmc_api/kmc_file.cpp:653:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
fread (sufix_file_buf, 1, (size_t) part_size, file_suf);
^
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_tools.cpp -o kmc_tools/kmc_tools.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/nc_utils.cpp -o kmc_tools/nc_utils.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parameters_parser.cpp -o kmc_tools/parameters_parser.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parser.cpp -o kmc_tools/parser.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/tokenizer.cpp -o kmc_tools/tokenizer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_filter.cpp -o kmc_tools/fastq_filter.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_reader.cpp -o kmc_tools/fastq_reader.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_writer.cpp -o kmc_tools/fastq_writer.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/percent_progress.cpp -o kmc_tools/percent_progress.o
ar rcs libkmc.a kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o
ranlib libkmc.a
mkdir -p bin
g++ -Wl,-z,relro -lm -lz -lbz2 -fopenmp -lpthread -o bin/kmc_dump kmc_dump/nc_utils.o kmc_api/mmer.o kmc_dump/kmc_dump.o kmc_api/kmc_file.o kmc_api/kmer_api.o
mkdir -p bin
g++ -Wl,-z,relro -lm -lz -lbz2 -fopenmp -lpthread -o bin/kmc_tools kmc_tools/kmc_header.o kmc_tools/kmc_tools.o kmc_tools/nc_utils.o kmc_tools/parameters_parser.o kmc_tools/parser.o kmc_tools/tokenizer.o kmc_tools/fastq_filter.o kmc_tools/fastq_reader.o kmc_tools/fastq_writer.o kmc_tools/percent_progress.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o
mkdir -p bin
g++ -Wl,-z,relro -lm -lz -lbz2 -fopenmp -lpthread -o bin/kmc kmer_counter/kmer_counter.o kmer_counter/mmer.o kmer_counter/mem_disk_file.o kmer_counter/rev_byte.o kmer_counter/bkb_writer.o kmer_counter/bkb_reader.o kmer_counter/fastq_reader.o kmer_counter/timer.o kmer_counter/radix.o kmer_counter/kb_completer.o kmer_counter/kb_storer.o kmer_counter/kmer.o kmer_counter/prob_qual.o
make[1]: Leaving directory '/«BUILDDIR»/kmc-2.3+dfsg'
dh_auto_test -a -O--parallel
fakeroot debian/rules binary-arch
dh binary-arch --parallel
dh_testroot -a -O--parallel
dh_prep -a -O--parallel
rm -f debian/kmc.substvars
rm -f debian/kmc.*.debhelper
rm -rf debian/kmc/
rm -f debian/libkmc-dev.substvars
rm -f debian/libkmc-dev.*.debhelper
rm -rf debian/libkmc-dev/
dh_auto_install -a -O--parallel
install -d debian/kmc
install -d debian/libkmc-dev
debian/rules override_dh_install
make[1]: Entering directory '/«BUILDDIR»/kmc-2.3+dfsg'
dh_install
install -d debian/kmc//bin
cp --reflink=auto -a ./bin/kmc debian/kmc//bin/
cp --reflink=auto -a ./bin/kmc_dump debian/kmc//bin/
cp --reflink=auto -a ./bin/kmc_tools debian/kmc//bin/
install -d debian/libkmc-dev/usr/include/kmc
cp --reflink=auto -a ./kmc_api/kmc_file.h debian/libkmc-dev/usr/include/kmc/
cp --reflink=auto -a ./kmc_api/kmer_api.h debian/libkmc-dev/usr/include/kmc/
cp --reflink=auto -a ./kmc_api/kmer_defs.h debian/libkmc-dev/usr/include/kmc/
cp --reflink=auto -a ./kmc_api/mmer.h debian/libkmc-dev/usr/include/kmc/
cp --reflink=auto -a ./kmc_api/stdafx.h debian/libkmc-dev/usr/include/kmc/
install -d debian/libkmc-dev/usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a ./libkmc.a debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/
make[1]: Leaving directory '/«BUILDDIR»/kmc-2.3+dfsg'
dh_installdocs -a -O--parallel
install -d debian/kmc/usr/share/doc/kmc
install -p -m0644 debian/copyright debian/kmc/usr/share/doc/kmc/copyright
install -d debian/libkmc-dev/usr/share/doc/libkmc-dev
install -p -m0644 debian/copyright debian/libkmc-dev/usr/share/doc/libkmc-dev/copyright
dh_installchangelogs -a -O--parallel
install -p -m0644 debian/changelog debian/kmc/usr/share/doc/kmc/changelog.Debian
install -p -m0644 debian/changelog debian/libkmc-dev/usr/share/doc/libkmc-dev/changelog.Debian
debian/rules override_dh_installman
make[1]: Entering directory '/«BUILDDIR»/kmc-2.3+dfsg'
mkdir -p /«BUILDDIR»/kmc-2.3+dfsg/debian/man
/«BUILDDIR»/kmc-2.3+dfsg/debian/usage_to_man
Can't exec "1": No such file or directory at /«BUILDDIR»/kmc-2.3+dfsg/debian/usage_to_man line 19.
Creating manpages
Manpage creation complete
Manpage creation complete
ronn /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/*.ronn
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-compact.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-compact.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-complex.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-complex.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-counters_subtract.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-counters_subtract.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-dump.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-dump.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-filter.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-filter.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-histogram.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-histogram.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-intersect.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-intersect.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-kmers_subtract.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-kmers_subtract.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-sort.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-sort.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-union.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools-union.1.html +man
roff: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools.1
html: /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/kmc_tools.1.html +man
cp /«BUILDDIR»/kmc-2.3+dfsg/debian/man_src/*.? /«BUILDDIR»/kmc-2.3+dfsg/debian/man
dh_installman --
install -d debian/kmc/usr/share/man/man1/
install -p -m0644 man/kmc.1 debian/kmc/usr/share/man/man1/kmc.1
install -p -m0644 man/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_dump.1
install -p -m0644 debian/man/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1
install -p -m0644 debian/man/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1
install -p -m0644 debian/man/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1
install -p -m0644 debian/man/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1
install -p -m0644 debian/man/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1
install -p -m0644 debian/man/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1
install -p -m0644 debian/man/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1
install -p -m0644 debian/man/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1
install -p -m0644 debian/man/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1
install -p -m0644 debian/man/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1
install -p -m0644 debian/man/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools.1
man --recode UTF-8 ./kmc\.1 > kmc\.1\.new
chmod 644 kmc.1.new
mv -f kmc.1.new kmc.1
man --recode UTF-8 ./kmc_dump\.1 > kmc_dump\.1\.new
chmod 644 kmc_dump.1.new
mv -f kmc_dump.1.new kmc_dump.1
man --recode UTF-8 ./kmc_tools\-compact\.1 > kmc_tools\-compact\.1\.new
chmod 644 kmc_tools-compact.1.new
mv -f kmc_tools-compact.1.new kmc_tools-compact.1
man --recode UTF-8 ./kmc_tools\-complex\.1 > kmc_tools\-complex\.1\.new
chmod 644 kmc_tools-complex.1.new
mv -f kmc_tools-complex.1.new kmc_tools-complex.1
man --recode UTF-8 ./kmc_tools\-counters_subtract\.1 > kmc_tools\-counters_subtract\.1\.new
chmod 644 kmc_tools-counters_subtract.1.new
mv -f kmc_tools-counters_subtract.1.new kmc_tools-counters_subtract.1
man --recode UTF-8 ./kmc_tools\-dump\.1 > kmc_tools\-dump\.1\.new
chmod 644 kmc_tools-dump.1.new
mv -f kmc_tools-dump.1.new kmc_tools-dump.1
man --recode UTF-8 ./kmc_tools\-filter\.1 > kmc_tools\-filter\.1\.new
chmod 644 kmc_tools-filter.1.new
mv -f kmc_tools-filter.1.new kmc_tools-filter.1
man --recode UTF-8 ./kmc_tools\-histogram\.1 > kmc_tools\-histogram\.1\.new
chmod 644 kmc_tools-histogram.1.new
mv -f kmc_tools-histogram.1.new kmc_tools-histogram.1
man --recode UTF-8 ./kmc_tools\-intersect\.1 > kmc_tools\-intersect\.1\.new
chmod 644 kmc_tools-intersect.1.new
mv -f kmc_tools-intersect.1.new kmc_tools-intersect.1
man --recode UTF-8 ./kmc_tools\-kmers_subtract\.1 > kmc_tools\-kmers_subtract\.1\.new
chmod 644 kmc_tools-kmers_subtract.1.new
mv -f kmc_tools-kmers_subtract.1.new kmc_tools-kmers_subtract.1
man --recode UTF-8 ./kmc_tools\-sort\.1 > kmc_tools\-sort\.1\.new
chmod 644 kmc_tools-sort.1.new
mv -f kmc_tools-sort.1.new kmc_tools-sort.1
man --recode UTF-8 ./kmc_tools\-union\.1 > kmc_tools\-union\.1\.new
chmod 644 kmc_tools-union.1.new
mv -f kmc_tools-union.1.new kmc_tools-union.1
man --recode UTF-8 ./kmc_tools\.1 > kmc_tools\.1\.new
chmod 644 kmc_tools.1.new
mv -f kmc_tools.1.new kmc_tools.1
make[1]: Leaving directory '/«BUILDDIR»/kmc-2.3+dfsg'
dh_perl -a -O--parallel
dh_link -a -O--parallel
dh_strip_nondeterminism -a -O--parallel
dh_compress -a -O--parallel
cd debian/kmc
chmod a-x usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1
gzip -9nf usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1
cd '/«BUILDDIR»/kmc-2.3+dfsg'
cd debian/libkmc-dev
chmod a-x usr/share/doc/libkmc-dev/changelog.Debian
gzip -9nf usr/share/doc/libkmc-dev/changelog.Debian
cd '/«BUILDDIR»/kmc-2.3+dfsg'
dh_fixperms -a -O--parallel
find debian/kmc -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/kmc ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/kmc/usr/share/doc -type f ! -regex 'debian/kmc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 0755
find debian/kmc/usr/share/man debian/kmc/usr/man/ debian/kmc/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/usr/lib/arm-linux-gnueabihf/perl5/5.22 debian/kmc/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X
find debian/kmc -perm -5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 0644
find debian/kmc/bin -type f -print0 2>/dev/null | xargs -0r chmod a+x
find debian/kmc/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/libkmc-dev -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libkmc-dev ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libkmc-dev/usr/share/doc -type f ! -regex 'debian/libkmc-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libkmc-dev/usr/share/man debian/libkmc-dev/usr/man/ debian/libkmc-dev/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/perl5/5.22 debian/libkmc-dev/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X
find debian/libkmc-dev -perm -5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libkmc-dev/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w
dh_strip -a -O--parallel
install -d debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/1a
objcopy --only-keep-debug --compress-debug-sections debian/kmc/bin/kmc debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/1a/5b81edb53ba57c9c6021c5ade8b41238ef457e.debug
chmod 0644 debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/1a/5b81edb53ba57c9c6021c5ade8b41238ef457e.debug
strip --remove-section=.comment --remove-section=.note debian/kmc/bin/kmc
objcopy --add-gnu-debuglink debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/1a/5b81edb53ba57c9c6021c5ade8b41238ef457e.debug debian/kmc/bin/kmc
install -d debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/bc
objcopy --only-keep-debug --compress-debug-sections debian/kmc/bin/kmc_dump debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/bc/29806a302c37a4142413547d54177ed3c71352.debug
chmod 0644 debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/bc/29806a302c37a4142413547d54177ed3c71352.debug
strip --remove-section=.comment --remove-section=.note debian/kmc/bin/kmc_dump
objcopy --add-gnu-debuglink debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/bc/29806a302c37a4142413547d54177ed3c71352.debug debian/kmc/bin/kmc_dump
install -d debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/6c
objcopy --only-keep-debug --compress-debug-sections debian/kmc/bin/kmc_tools debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/6c/cfd8c7f2de977411c1111aab14309b5bdd426c.debug
chmod 0644 debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/6c/cfd8c7f2de977411c1111aab14309b5bdd426c.debug
strip --remove-section=.comment --remove-section=.note debian/kmc/bin/kmc_tools
objcopy --add-gnu-debuglink debian/.debhelper/kmc/ddeb-root/usr/lib/debug/.build-id/6c/cfd8c7f2de977411c1111aab14309b5bdd426c.debug debian/kmc/bin/kmc_tools
install -d debian/.debhelper/kmc/ddeb-root/usr/share/doc
ln -s kmc debian/.debhelper/kmc/ddeb-root/usr/share/doc/kmc-dbgsym
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/libkmc.a
dh_makeshlibs -a -O--parallel
rm -f debian/kmc/DEBIAN/shlibs
rm -f debian/libkmc-dev/DEBIAN/shlibs
dh_shlibdeps -a -O--parallel
install -d debian/kmc/DEBIAN
dpkg-shlibdeps -Tdebian/kmc.substvars debian/kmc/bin/kmc debian/kmc/bin/kmc_dump debian/kmc/bin/kmc_tools
dpkg-shlibdeps: warning: debian/kmc/bin/kmc_tools contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/kmc/bin/kmc_dump contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/kmc/bin/kmc contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/kmc/bin/kmc_tools debian/kmc/bin/kmc_dump debian/kmc/bin/kmc were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
install -d debian/libkmc-dev/DEBIAN
dh_installdeb -a -O--parallel
dh_gencontrol -a -O--parallel
echo misc:Depends= >> debian/kmc.substvars
echo misc:Pre-Depends= >> debian/kmc.substvars
install -d debian/.debhelper/kmc/ddeb-root/DEBIAN
dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/.debhelper/kmc/ddeb-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=extra -DAuto-Built-Package=debug-symbols -DPackage=kmc-dbgsym "-DDepends=kmc (= \${binary:Version})" "-DDescription=Debug symbols for kmc" "-DBuild-Ids=1a5b81edb53ba57c9c6021c5ade8b41238ef457e 6ccfd8c7f2de977411c1111aab14309b5bdd426c bc29806a302c37a4142413547d54177ed3c71352" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
chmod 0644 debian/.debhelper/kmc/ddeb-root/DEBIAN/control
chown 0:0 debian/.debhelper/kmc/ddeb-root/DEBIAN/control
dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/kmc
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
chmod 0644 debian/kmc/DEBIAN/control
chown 0:0 debian/kmc/DEBIAN/control
echo misc:Depends= >> debian/libkmc-dev.substvars
echo misc:Pre-Depends= >> debian/libkmc-dev.substvars
dpkg-gencontrol -plibkmc-dev -ldebian/changelog -Tdebian/libkmc-dev.substvars -Pdebian/libkmc-dev
dpkg-gencontrol: warning: Depends field of package libkmc-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
chmod 0644 debian/libkmc-dev/DEBIAN/control
chown 0:0 debian/libkmc-dev/DEBIAN/control
dh_md5sums -a -O--parallel
(cd debian/kmc >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 0644 debian/kmc/DEBIAN/md5sums
chown 0:0 debian/kmc/DEBIAN/md5sums
(cd debian/.debhelper/kmc/ddeb-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 0644 debian/.debhelper/kmc/ddeb-root/DEBIAN/md5sums
chown 0:0 debian/.debhelper/kmc/ddeb-root/DEBIAN/md5sums
(cd debian/libkmc-dev >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 0644 debian/libkmc-dev/DEBIAN/md5sums
chown 0:0 debian/libkmc-dev/DEBIAN/md5sums
dh_builddeb -a -O--parallel
dpkg-deb -z1 -Zxz -Sextreme --build debian/.debhelper/kmc/ddeb-root ..
dpkg-deb --build debian/libkmc-dev ..
dpkg-deb: building package 'kmc-dbgsym' in '../kmc-dbgsym_2.3+dfsg-1_armhf.deb'.
dpkg-deb: building package 'libkmc-dev' in '../libkmc-dev_2.3+dfsg-1_armhf.deb'.
dpkg-deb --build debian/kmc ..
dpkg-deb: building package 'kmc' in '../kmc_2.3+dfsg-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../kmc_2.3+dfsg-1_armhf.changes
dpkg-genchanges: warning: package kmc-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build kmc-2.3+dfsg
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20160110-1126
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
kmc_2.3+dfsg-1_armhf.changes:
─────────────────────────────
Format: 1.8
Date: Sat, 19 Dec 2015 14:51:54 +0000
Source: kmc
Binary: kmc libkmc-dev
Architecture: armhf
Version: 2.3+dfsg-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Sascha Steinbiss <sascha@steinbiss.name>
Description:
kmc - count kmers in genomic sequences
libkmc-dev - library to access KMC k-mer count files
Changes:
kmc (2.3+dfsg-1) unstable; urgency=medium
.
[ Kevin Murray ]
* Add libkmc-dev package
.
[ Sascha Steinbiss ]
* New upstream release
* Incorporate new 'kmc_tools' executable and manpages
* Add autopkgtest
Checksums-Sha1:
d3ac529018acfaada21fde137672502c4452f5bc 8101490 kmc-dbgsym_2.3+dfsg-1_armhf.deb
280d23971d4d27e88f30b406e688e6cc2e6e0d51 433680 kmc_2.3+dfsg-1_armhf.deb
a2149fb2818b1525011fd03966f7d90474832caa 24980 libkmc-dev_2.3+dfsg-1_armhf.deb
Checksums-Sha256:
72c7426cafba586261eb491eb201e5f978c66e57844f0f1f6ceac54c4e7aed01 8101490 kmc-dbgsym_2.3+dfsg-1_armhf.deb
9e4f60baaf25e8ae95f4d0abe690f98bef4af32ce80236583ddd2bc8700328a7 433680 kmc_2.3+dfsg-1_armhf.deb
d34af6612fdcfc07b71aa0eca9b127169b5ed7b74e735c2ca460910935447654 24980 libkmc-dev_2.3+dfsg-1_armhf.deb
Files:
22648520039ade6d3a0dfe8c68583a4d 8101490 debug extra kmc-dbgsym_2.3+dfsg-1_armhf.deb
e1208daec881933964ca80e4076931a7 433680 science optional kmc_2.3+dfsg-1_armhf.deb
d393e5a3e054cebc0c938f610e22f2c1 24980 libdevel optional libkmc-dev_2.3+dfsg-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
kmc-dbgsym_2.3+dfsg-1_armhf.deb
───────────────────────────────
new debian package, version 2.0.
size 8101490 bytes: control archive=598 bytes.
478 bytes, 13 lines control
318 bytes, 3 lines md5sums
Package: kmc-dbgsym
Source: kmc
Version: 2.3+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 9009
Depends: kmc (= 2.3+dfsg-1)
Section: debug
Priority: extra
Homepage: http://sun.aei.polsl.pl/kmc
Description: Debug symbols for kmc
Auto-Built-Package: debug-symbols
Build-Ids: 1a5b81edb53ba57c9c6021c5ade8b41238ef457e 6ccfd8c7f2de977411c1111aab14309b5bdd426c bc29806a302c37a4142413547d54177ed3c71352
drwxr-xr-x root/root 0 2016-01-10 11:25 ./
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/debug/.build-id/1a/
-rw-r--r-- root/root 5588844 2016-01-10 11:25 ./usr/lib/debug/.build-id/1a/5b81edb53ba57c9c6021c5ade8b41238ef457e.debug
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/debug/.build-id/6c/
-rw-r--r-- root/root 3464316 2016-01-10 11:25 ./usr/lib/debug/.build-id/6c/cfd8c7f2de977411c1111aab14309b5bdd426c.debug
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/debug/.build-id/bc/
-rw-r--r-- root/root 158376 2016-01-10 11:25 ./usr/lib/debug/.build-id/bc/29806a302c37a4142413547d54177ed3c71352.debug
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-01-10 11:25 ./usr/share/doc/kmc-dbgsym -> kmc
kmc_2.3+dfsg-1_armhf.deb
────────────────────────
new debian package, version 2.0.
size 433680 bytes: control archive=1643 bytes.
1610 bytes, 31 lines control
1240 bytes, 18 lines md5sums
Package: kmc
Version: 2.3+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1980
Depends: libbz2-1.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.6)
Section: science
Priority: optional
Homepage: http://sun.aei.polsl.pl/kmc
Description: count kmers in genomic sequences
The kmc software is designed for counting k-mers (sequences of
consecutive k symbols) in a set of reads. K-mer counting is
important for many bioinformatics applications, e.g. developing de Bruijn
graph assemblers.
.
Building de Bruijn graphs is a commonly used approach for genome
assembly with data from second-generation sequencing.
Unfortunately, sequencing errors (frequent in practice)
result in huge memory requirements for de Bruijn graphs, as well
as long build time. One of the popular approaches to handle this
problem is filtering the input reads in such a way that unique k-mers
(very likely obtained as a result of an error) are discarded.
.
Thus, KMC scans the raw reads and produces a compact representation
of all non-unique reads accompanied with number of their occurrences.
The algorithm implemented in KMC makes use mostly of disk space rather
than RAM, which allows one to use KMC even on rather typical personal
computers. When run on high-end servers (what is necessary for KMC
competitors) it outperforms them in both memory requirements and
speed of computation. The disk space necessary for computation is in
order of the size of input data (usually it is smaller).
drwxr-xr-x root/root 0 2016-01-10 11:25 ./
drwxr-xr-x root/root 0 2016-01-10 11:25 ./bin/
-rwxr-xr-x root/root 1338936 2016-01-10 11:25 ./bin/kmc
-rwxr-xr-x root/root 42976 2016-01-10 11:25 ./bin/kmc_dump
-rwxr-xr-x root/root 617328 2016-01-10 11:25 ./bin/kmc_tools
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/doc/kmc/
-rw-r--r-- root/root 510 2015-12-25 11:20 ./usr/share/doc/kmc/changelog.Debian.gz
-rw-r--r-- root/root 1210 2015-12-25 11:20 ./usr/share/doc/kmc/copyright
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/man/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/man/man1/
-rw-r--r-- root/root 1131 2016-01-10 11:25 ./usr/share/man/man1/kmc.1.gz
-rw-r--r-- root/root 612 2016-01-10 11:25 ./usr/share/man/man1/kmc_dump.1.gz
-rw-r--r-- root/root 603 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-compact.1.gz
-rw-r--r-- root/root 1081 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-complex.1.gz
-rw-r--r-- root/root 781 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-counters_subtract.1.gz
-rw-r--r-- root/root 626 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-dump.1.gz
-rw-r--r-- root/root 781 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-filter.1.gz
-rw-r--r-- root/root 595 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-histogram.1.gz
-rw-r--r-- root/root 744 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-intersect.1.gz
-rw-r--r-- root/root 746 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-kmers_subtract.1.gz
-rw-r--r-- root/root 651 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-sort.1.gz
-rw-r--r-- root/root 734 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools-union.1.gz
-rw-r--r-- root/root 972 2016-01-10 11:25 ./usr/share/man/man1/kmc_tools.1.gz
libkmc-dev_2.3+dfsg-1_armhf.deb
───────────────────────────────
new debian package, version 2.0.
size 24980 bytes: control archive=852 bytes.
614 bytes, 17 lines control
519 bytes, 8 lines md5sums
Package: libkmc-dev
Source: kmc
Version: 2.3+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 92
Section: libdevel
Priority: optional
Homepage: http://sun.aei.polsl.pl/kmc
Description: library to access KMC k-mer count files
The kmc software is designed for counting k-mers (sequences of
consecutive k symbols) in a set of reads. K-mer counting is
important for many bioinformatics applications, e.g. developing de Bruijn
graph assemblers.
.
This package contains the C++ library headers for accessing kmc's output
file format.
drwxr-xr-x root/root 0 2016-01-10 11:25 ./
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/include/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/include/kmc/
-rw-r--r-- root/root 5781 2015-09-10 15:25 ./usr/include/kmc/kmc_file.h
-rw-r--r-- root/root 18341 2015-09-10 15:25 ./usr/include/kmc/kmer_api.h
-rw-r--r-- root/root 1022 2015-09-10 15:25 ./usr/include/kmc/kmer_defs.h
-rw-r--r-- root/root 4163 2015-09-10 15:25 ./usr/include/kmc/mmer.h
-rw-r--r-- root/root 85 2015-09-10 15:25 ./usr/include/kmc/stdafx.h
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 48336 2016-01-10 11:25 ./usr/lib/arm-linux-gnueabihf/libkmc.a
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-01-10 11:25 ./usr/share/doc/libkmc-dev/
-rw-r--r-- root/root 510 2015-12-25 11:20 ./usr/share/doc/libkmc-dev/changelog.Debian.gz
-rw-r--r-- root/root 1210 2015-12-25 11:20 ./usr/share/doc/libkmc-dev/copyright
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 103444
Build-Time: 1180
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 280
Job: kmc_2.3+dfsg-1
Machine Architecture: armhf
Package: kmc
Package-Time: 1506
Source-Version: 2.3+dfsg-1
Space: 103444
Status: successful
Version: 2.3+dfsg-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20160110-1126
Build needed 00:25:06, 103444k disc space