gerris →
20131206+dfsg-7+b2 →
armhf → 2016-03-14 23:25:10
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on testwandboard
+==============================================================================+
| gerris 20131206+dfsg-7+b2 (armhf) 14 Mar 2016 22:20 |
+==============================================================================+
Package: gerris
Version: 20131206+dfsg-7+b2
Source Version: 20131206+dfsg-7
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/gerris-XLKTyE/gerris-20131206+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/gerris-XLKTyE' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-70ae7334-447f-42d6-9e6e-7f6724e157a9' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8803 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.9 MB]
Fetched 19.7 MB in 24s (808 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'gerris' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-science/packages/gerris.git
Please use:
git clone git://anonscm.debian.org/debian-science/packages/gerris.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2854 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main gerris 20131206+dfsg-7 (dsc) [2555 B]
Get:2 http://172.17.0.1/private stretch-staging/main gerris 20131206+dfsg-7 (tar) [2834 kB]
Get:3 http://172.17.0.1/private stretch-staging/main gerris 20131206+dfsg-7 (diff) [17.1 kB]
Fetched 2854 kB in 1s (2425 kB/s)
Download complete and in download only mode
Check architectures
-------------------
Check dependencies
------------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ABmuBr/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ Sources [194 B]
Get:5 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ Packages [507 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 71 not upgraded.
Need to get 0 B/764 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-ABmuBr/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [764 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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(Reading database ... 12685 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: autotools-dev, debhelper (>= 9), dh-autoreconf, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python
Filtered Build-Depends: autotools-dev, debhelper (>= 9), dh-autoreconf, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python
dpkg-deb: building package 'sbuild-build-depends-gerris-dummy' in '/<<BUILDDIR>>/resolver-SwXlbc/apt_archive/sbuild-build-depends-gerris-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ Sources [275 B]
Get:5 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ Packages [594 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
+------------------------------------------------------------------------------+
| Install gerris build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cpp-5 debhelper
dh-autoreconf dh-strip-nondeterminism file g++-5 gcc-5 gcc-5-base gettext
gettext-base gfortran gfortran-5 groff-base hdf5-helpers intltool-debian
libaec-dev libaec0 libarchive-zip-perl libasan2 libatomic1 libcc1-0
libcroco3 libcurl3-gnutls libcurl4-gnutls-dev libelf1 libexpat1 libffi6
libfile-stripnondeterminism-perl libgcc-5-dev libgcc1 libgfortran-5-dev
libgfortran3 libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev
libgnutls30 libgomp1 libgsl-dev libgsl2 libgssapi-krb5-2 libgts-0.7-5
libgts-bin libgts-dev libhdf5-10 libhdf5-cpp-11 libhdf5-dev libhogweed4
libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libicu55 libidn11
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libldap-2.4-2 libltdl-dev libltdl7 libmagic1
libnetcdf-dev libnetcdf11 libnettle6 libnghttp2-14 libopenmpi-dev
libopenmpi1.10 libp11-kit0 libpcre16-3 libpcre3 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2
libsqlite3-0 libssh2-1 libssl1.0.2 libstdc++-5-dev libstdc++6 libsz2
libtasn1-6 libtimedate-perl libtool libubsan0 libunistring0 libxml2 m4
man-db mime-support mpi-default-dev openmpi-common pkg-config po-debconf
python python-minimal python2.7 python2.7-minimal zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-5-locales dh-make gcc-5-doc libstdc++6-5-dbg libgcc1-dbg
libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg liblsan0-dbg
libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg
gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-5-doc
libgfortran3-dbg groff libcurl4-doc libcurl3-dbg libgnutls28-dev
libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev
libglib2.0-doc gnutls-bin gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info
| gsl-ref-html krb5-doc krb5-user libgts-doc libhdf5-doc
libhwloc-contrib-plugins libtool-doc netcdf-bin netcdf-doc opennmpi-doc
libstdc++-5-doc gcj-jdk less www-browser libmail-box-perl python-doc
python-tk python2.7-doc binfmt-support
Recommended packages:
curl | wget | lynx-cur ca-certificates shared-mime-info xdg-user-dirs
libhwloc-plugins krb5-locales openmpi-bin libsasl2-modules xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran
gfortran-5 groff-base hdf5-helpers intltool-debian libaec-dev libaec0
libarchive-zip-perl libcroco3 libcurl3-gnutls libcurl4-gnutls-dev libelf1
libexpat1 libffi6 libfile-stripnondeterminism-perl libgfortran-5-dev
libgfortran3 libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev
libgnutls30 libgsl-dev libgsl2 libgssapi-krb5-2 libgts-0.7-5 libgts-bin
libgts-dev libhdf5-10 libhdf5-cpp-11 libhdf5-dev libhogweed4 libhwloc-dev
libhwloc5 libibverbs-dev libibverbs1 libicu55 libidn11 libjpeg-dev
libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 libldap-2.4-2 libltdl-dev libltdl7 libmagic1 libnetcdf-dev
libnetcdf11 libnettle6 libnghttp2-14 libopenmpi-dev libopenmpi1.10
libp11-kit0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpython-stdlib libpython2.7-minimal libpython2.7-stdlib librtmp1
libsasl2-2 libsasl2-modules-db libsigsegv2 libsqlite3-0 libssh2-1
libssl1.0.2 libsz2 libtasn1-6 libtimedate-perl libtool libunistring0 libxml2
m4 man-db mime-support mpi-default-dev openmpi-common pkg-config po-debconf
python python-minimal python2.7 python2.7-minimal
sbuild-build-depends-gerris-dummy zlib1g-dev
The following packages will be upgraded:
cpp-5 g++-5 gcc-5 gcc-5-base libasan2 libatomic1 libcc1-0 libgcc-5-dev
libgcc1 libgomp1 libpcre3 libstdc++-5-dev libstdc++6 libubsan0
14 upgraded, 101 newly installed, 0 to remove and 57 not upgraded.
Need to get 144 MB/144 MB of archives.
After this operation, 263 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-SwXlbc/apt_archive ./ sbuild-build-depends-gerris-dummy 0.invalid.0 [854 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf libpcre3 armhf 2:8.38-3 [308 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libgomp1 armhf 5.3.1-11 [47.3 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libatomic1 armhf 5.3.1-11 [6554 B]
Get:5 http://172.17.0.1/private stretch-staging/main armhf gcc-5-base armhf 5.3.1-11 [170 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libgcc1 armhf 1:5.3.1-11 [38.4 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libasan2 armhf 5.3.1-11 [227 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libubsan0 armhf 5.3.1-11 [84.8 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf cpp-5 armhf 5.3.1-11 [22.9 MB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf libcc1-0 armhf 5.3.1-11 [24.8 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf g++-5 armhf 5.3.1-11 [24.5 MB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf gcc-5 armhf 5.3.1-11 [22.9 MB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libgcc-5-dev armhf 5.3.1-11 [450 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libstdc++-5-dev armhf 5.3.1-11 [1430 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libstdc++6 armhf 5.3.1-11 [326 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-7 [1083 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.11-4 [381 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.11-4 [1092 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf python-minimal armhf 2.7.11-1 [40.0 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf mime-support all 3.59 [36.4 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.1.0-7 [59.8 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libsqlite3-0 armhf 3.10.2-1 [408 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2g-1 [886 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.11-4 [1818 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf python2.7 armhf 2.7.11-4 [267 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.11-1 [19.5 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf python armhf 2.7.11-1 [150 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-1.2 [129 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libpcrecpp0v5 armhf 2:8.38-3 [148 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-4 [28.2 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libnettle6 armhf 3.2-1 [202 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libhogweed4 armhf 3.2-1 [126 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libidn11 armhf 1.32-3 [110 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.2-3 [93.3 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6 armhf 4.7-3 [44.4 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.4.9-2 [711 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-8 [11.5 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.13.2+dfsg-5 [56.6 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.13.2+dfsg-5 [110 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.13.2+dfsg-5 [259 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.13.2+dfsg-5 [130 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.26.dfsg1-14+b1 [65.8 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.26.dfsg1-14+b1 [97.1 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b2 [198 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-9 [338 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20150820.1 [71.7 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.7-2 [424 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.56-2 [94.9 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.016-1 [11.9 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.016-1 [6998 B]
Get:69 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160306 [815 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 11 [15.7 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 5.3.1-11 [153 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf libgfortran-5-dev armhf 5.3.1-11 [182 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf gfortran-5 armhf 5.3.1-11 [23.7 MB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf gfortran armhf 4:5.3.1-1+rpi1 [1362 B]
Get:76 http://172.17.0.1/private stretch-staging/main armhf hdf5-helpers armhf 1.8.16+docs-6+b1 [35.5 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf libaec0 armhf 0.3.2-1 [19.4 kB]
Get:78 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.8.0-1 [76.7 kB]
Get:79 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d-1+b1 [54.4 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.5.0-2.1 [121 kB]
Get:81 http://172.17.0.1/private stretch-staging/main armhf libcurl3-gnutls armhf 7.47.0-1 [244 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf libcurl4-gnutls-dev armhf 7.47.0-1 [330 kB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf libelf1 armhf 0.163-5.1 [162 kB]
Get:84 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-data all 2.46.2-3 [2418 kB]
Get:85 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-bin armhf 2.46.2-3 [1566 kB]
Get:86 http://172.17.0.1/private stretch-staging/main armhf libpcre16-3 armhf 2:8.38-3 [229 kB]
Get:87 http://172.17.0.1/private stretch-staging/main armhf libpcre32-3 armhf 2:8.38-3 [223 kB]
Get:88 http://172.17.0.1/private stretch-staging/main armhf libpcre3-dev armhf 2:8.38-3 [556 kB]
Get:89 http://172.17.0.1/private stretch-staging/main armhf pkg-config armhf 0.29-3 [59.0 kB]
Get:90 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:91 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-dev armhf 2.46.2-3 [2715 kB]
Get:92 http://172.17.0.1/private stretch-staging/main armhf libgsl2 armhf 2.1+dfsg-2 [697 kB]
Get:93 http://172.17.0.1/private stretch-staging/main armhf libgsl-dev armhf 2.1+dfsg-2 [812 kB]
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Get:106 http://172.17.0.1/private stretch-staging/main armhf libnetcdf11 armhf 1:4.4.0-1 [285 kB]
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Get:112 http://172.17.0.1/private stretch-staging/main armhf libopenmpi1.10 armhf 1.10.2-8+rpi1 [1781 kB]
Get:113 http://172.17.0.1/private stretch-staging/main armhf openmpi-common all 1.10.2-8+rpi1 [141 kB]
Get:114 http://172.17.0.1/private stretch-staging/main armhf libopenmpi-dev armhf 1.10.2-8+rpi1 [625 kB]
Get:115 http://172.17.0.1/private stretch-staging/main armhf mpi-default-dev armhf 1.4 [4612 B]
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Setting up dh-strip-nondeterminism (0.016-1) ...
Processing triggers for libc-bin (2.21-7) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.3.0-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26-3 dpkg-dev_1.18.4 g++-5_5.3.1-11 gcc-5_5.3.1-11 libc6-dev_2.21-7 libstdc++-5-dev_5.3.1-11 libstdc++6_5.3.1-11 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.113+nmu3 apt_1.2.3 autoconf_2.69-9 automake_1:1.15-4 autopoint_0.19.7-2 autotools-dev_20150820.1 base-files_9.5+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.26-3 bsdmainutils_9.0.6 bsdutils_1:2.27.1-3 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.24-1 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-11 dash_0.5.8-2.1 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20160306 debianutils_4.7 dh-autoreconf_11 dh-strip-nondeterminism_0.016-1 diffutils_1:3.3-3 dmsetup_2:1.02.115-2 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.6.0+git+20160126-2 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-11 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-11 gcc-5-base_5.3.1-11 gettext_0.19.7-2 gettext-base_0.19.7-2 gfortran_4:5.3.1-1+rpi1 gfortran-5_5.3.1-11 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-7 gzip_1.6-4 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libltdl-dev_2.4.6-0.1 libltdl7_2.4.6-0.1 liblz4-1_0.0~r131-1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.27.1-3 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libnetcdf-dev_1:4.4.0-1 libnetcdf11_1:4.4.0-1 libnettle6_3.2-1 libnghttp2-14_1.8.0-1 libopenmpi-dev_1.10.2-8+rpi1 libopenmpi1.10_1.10.2-8+rpi1 libp11-kit0_0.23.2-3 libpam-modules_1.1.8-3.2 libpam-modules-bin_1.1.8-3.2 libpam-runtime_1.1.8-3.2 libpam0g_1.1.8-3.2 libpcre16-3_2:8.38-3 libpcre3_2:8.38-3 libpcre3-dev_2:8.38-3 libpcre32-3_2:8.38-3 libpcrecpp0v5_2:8.38-3 libperl5.22_5.22.1-5 libpipeline1_1.4.1-2 libplymouth4_0.9.2-3 libpng12-0_1.2.54-1 libprocps5_2:3.3.11-3 libpython-stdlib_2.7.11-1 libpython2.7-minimal_2.7.11-4 libpython2.7-stdlib_2.7.11-4 libreadline6_6.3-8+b3 librtmp1_2.4+20151223.gitfa8646d-1+b1 libsasl2-2_2.1.26.dfsg1-14+b1 libsasl2-modules-db_2.1.26.dfsg1-14+b1 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libsigsegv2_2.10-4 libsmartcols1_2.27.1-3 libsqlite3-0_3.10.2-1 libss2_1.42.13-1 libssh2-1_1.5.0-2.1 libssl1.0.2_1.0.2g-1 libstdc++-5-dev_5.3.1-11 libstdc++6_5.3.1-11 libsystemd0_228-6 libsz2_0.3.2-1 libtasn1-6_4.7-3 libtext-charwidth-perl_0.04-7+b6 libtext-iconv-perl_1.7-5+b7 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libtool_2.4.6-0.1 libubsan0_5.3.1-11 libudev1_228-6 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-3 libxml2_2.9.3+dfsg1-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_9.20160110+rpi1 m4_1.4.17-5 make_4.1-5 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.04-1 mawk_1.3.3-17 mime-support_3.59 mount_2.27.1-3 mpi-default-dev_1.4 multiarch-support_2.21-7 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 openmpi-common_1.10.2-8+rpi1 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-5 perl-base_5.22.1-5 perl-modules-5.22_5.22.1-7 pkg-config_0.29-3 plymouth_0.9.2-3 po-debconf_1.0.19 procps_2:3.3.11-3 python_2.7.11-1 python-minimal_2.7.11-1 python2.7_2.7.11-4 python2.7-minimal_2.7.11-4 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gerris-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-6 systemd-sysv_228-6 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2016a-1 udev_228-6 util-linux_2.27.1-3 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu Feb 25 20:13:51 2016 UTC using RSA key ID CFA7FF06
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./gerris_20131206+dfsg-7.dsc
dpkg-source: info: extracting gerris in gerris-20131206+dfsg
dpkg-source: info: unpacking gerris_20131206+dfsg.orig.tar.gz
dpkg-source: info: unpacking gerris_20131206+dfsg-7.debian.tar.xz
dpkg-source: info: applying 01_automake_doc_examples
dpkg-source: info: applying 02_fix_makefiles.patch
dpkg-source: info: applying 03_build_funct.patch
dpkg-source: info: applying 04_replace_ffmpeg_by_avconv.patch
dpkg-source: info: applying 05_reproducible_build.patch
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 20131206+dfsg-7+b2
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-70ae7334-447f-42d6-9e6e-7f6724e157a9
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: source package gerris
dpkg-buildpackage: source version 20131206+dfsg-7+b2
dpkg-buildpackage: source distribution stretch-staging
dpkg-source --before-build gerris-20131206+dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel --with autoreconf
dh_testdir -O--parallel
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_clean --builddirectory=debian/build
dh_auto_clean --builddirectory=debian/build-mpi
for bdir in debian/build debian/build-mpi; do \
rm $bdir/doc/examples/gerris.dic || true; \
rm $bdir/doc/examples/gfs.lang || true; \
rm $bdir/src/modules.c || true; \
rm $bdir/src/modules.h || true; \
done
rm: cannot remove 'debian/build/doc/examples/gerris.dic': No such file or directory
rm: cannot remove 'debian/build/doc/examples/gfs.lang': No such file or directory
rm: cannot remove 'debian/build/src/modules.c': No such file or directory
rm: cannot remove 'debian/build/src/modules.h': No such file or directory
rm: cannot remove 'debian/build-mpi/doc/examples/gerris.dic': No such file or directory
rm: cannot remove 'debian/build-mpi/doc/examples/gfs.lang': No such file or directory
rm: cannot remove 'debian/build-mpi/src/modules.c': No such file or directory
rm: cannot remove 'debian/build-mpi/src/modules.h': No such file or directory
rm doc/examples/gfs2tex.pyc
rm: cannot remove 'doc/examples/gfs2tex.pyc': No such file or directory
debian/rules:16: recipe for target 'override_dh_auto_clean' failed
make[1]: [override_dh_auto_clean] Error 1 (ignored)
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_autoreconf_clean -O--parallel
dh_clean -O--parallel
debian/rules build-arch
dh build-arch --parallel --with autoreconf
dh_testdir -a -O--parallel
dh_update_autotools_config -a -O--parallel
dh_autoreconf -a -O--parallel
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see:
configure.ac:50: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:108: installing './compile'
configure.ac:50: installing './missing'
doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/Makefile.am:12: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/Makefile.am:12: but option 'subdir-objects' is disabled
automake: warning: possible forward-incompatibility.
automake: At least a source file is in a subdirectory, but the 'subdir-objects'
automake: automake option hasn't been enabled. For now, the corresponding output
automake: object file(s) will be placed in the top-level directory. However,
automake: this behaviour will change in future Automake versions: they will
automake: unconditionally cause object files to be placed in the same subdirectory
automake: of the corresponding sources.
automake: You are advised to start using 'subdir-objects' option throughout your
automake: project, to avoid future incompatibilities.
doc/Makefile.am: installing './depcomp'
doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/examples/Makefile.am:123: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/examples/Makefile.am:123: but option 'subdir-objects' is disabled
parallel-tests: installing './test-driver'
modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_configure --builddirectory=debian/build -- --disable-mpi
../../configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --disable-mpi
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... dlltool
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gawk... (cached) mawk
checking for library containing strerror... none required
checking for ANSI C header files... (cached) yes
checking whether pointers can be stored in doubles... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GTS... yes
checking whether modules are supported... yes
../../configure: line 13283: build_function_gcc: No such file or directory
checking for pkg-config... yes
checking for m4... yes
checking check whether m4 accepts the -P option... yes
checking for pj_fwd in -lproj... no
configure: WARNING: libproj not found. Map module will not be available.
checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
checking for gsl-config... /usr/bin/gsl-config
checking for GSL - version >= 0.2.5... yes
checking for nc_open in -lnetcdf... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for g77... no
checking for xlf... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f77 accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
checking if f77 static flag -static works... yes
checking if f77 supports -c -o file.o... yes
checking if f77 supports -c -o file.o... (cached) yes
checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from f77... -v
checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/5 -L/usr/lib/gcc/arm-linux-gnueabihf/5/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/5/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for ode-config... no
configure: WARNING: ODE not found. ode module will not be available.
checking for lis_initialize in -llis... no
configure: WARNING: lis not found. lis Module won't be available.
checking for FFTW3... no
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking for unistd.h... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking for getopt_long... yes
checking for g_mkdtemp... yes
checking for open_memstream... yes
checking for funopen... no
checking for open_memstream... (cached) yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/gerris2D.pc
config.status: creating src/gerris3D.pc
config.status: creating tools/Makefile
config.status: creating modules/Makefile
config.status: creating modules/RStarTree/Makefile
config.status: creating modules/kdt/Makefile
config.status: creating modules/fes2004/Makefile
config.status: creating modules/wavewatch/Makefile
config.status: creating modules/culvert/Makefile
config.status: creating test/Makefile
config.status: creating doc/Makefile
config.status: creating doc/tutorial/Makefile
config.status: creating doc/examples/Makefile
config.status: creating doc/manpages/Makefile
config.status: creating doc/examples/gfs2doc
config.status: creating doc/examples/gfs-highlight
config.status: creating doc/examples/crossref.sh
config.status: creating desktop/Makefile
config.status: creating debian/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration summary
System = arm-unknown-linux-gnueabihf
C Compiler = gcc
C Flags = -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99
MPI enabled = no
GModule support = yes
pkg-config = yes
m4 = yes
m4 options = -P
open_memstream = yes
Modules
map = no
tide = yes
stokes = yes
wavewatch = no
hypre = no
lis = no
agmg = no
ode = no
bubbles = yes
fft = no
dh_auto_configure --builddirectory=debian/build-mpi -- --enable-mpi
../../configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --enable-mpi
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for mpicc... yes
checking for gcc... mpicc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking whether mpicc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of mpicc... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... dlltool
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gawk... (cached) mawk
checking for library containing strerror... none required
checking for ANSI C header files... (cached) yes
checking whether pointers can be stored in doubles... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GTS... yes
checking whether modules are supported... yes
../../configure: line 13283: build_function_gcc: No such file or directory
checking for pkg-config... yes
checking for m4... yes
checking check whether m4 accepts the -P option... yes
checking for pj_fwd in -lproj... no
configure: WARNING: libproj not found. Map module will not be available.
checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
checking for gsl-config... /usr/bin/gsl-config
checking for GSL - version >= 0.2.5... yes
checking for nc_open in -lnetcdf... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for g77... no
checking for xlf... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f77 accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
checking if f77 static flag -static works... yes
checking if f77 supports -c -o file.o... yes
checking if f77 supports -c -o file.o... (cached) yes
checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from f77... -v
checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/5 -L/usr/lib/gcc/arm-linux-gnueabihf/5/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/5/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for ode-config... no
configure: WARNING: ODE not found. ode module will not be available.
checking for HYPRE_IJMatrixCreate in -lHYPRE... no
configure: WARNING: HYPRE not found. hypre Module won't be available.
checking for lis_initialize in -llis... no
configure: WARNING: lis not found. lis Module won't be available.
checking for FFTW3... no
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking for unistd.h... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking for getopt_long... yes
checking for g_mkdtemp... yes
checking for open_memstream... yes
checking for funopen... no
checking for open_memstream... (cached) yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/gerris2D.pc
config.status: creating src/gerris3D.pc
config.status: creating tools/Makefile
config.status: creating modules/Makefile
config.status: creating modules/RStarTree/Makefile
config.status: creating modules/kdt/Makefile
config.status: creating modules/fes2004/Makefile
config.status: creating modules/wavewatch/Makefile
config.status: creating modules/culvert/Makefile
config.status: creating test/Makefile
config.status: creating doc/Makefile
config.status: creating doc/tutorial/Makefile
config.status: creating doc/examples/Makefile
config.status: creating doc/manpages/Makefile
config.status: creating doc/examples/gfs2doc
config.status: creating doc/examples/gfs-highlight
config.status: creating doc/examples/crossref.sh
config.status: creating desktop/Makefile
config.status: creating debian/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration summary
System = arm-unknown-linux-gnueabihf
C Compiler = mpicc
C Flags = -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99
MPI enabled = yes
GModule support = yes
pkg-config = yes
m4 = yes
m4 options = -P
open_memstream = yes
Modules
map = no
tide = yes
stokes = yes
wavewatch = no
hypre = no
lis = no
agmg = no
ode = no
bubbles = yes
fft = no
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_build --builddirectory=debian/build
make -j1
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make all-recursive
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
Making all in src
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
make all-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo '../../../src/'`ftt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ftt.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo '../../../src/'`fluid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/fluid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function]
static GfsGradient interpolate_1D2 (FttCell * cell,
^
../../../src/fluid.c: In function 'face_bilinear':
../../../src/fluid.c:1151:37: warning: 'd[2]' is used uninitialized in this function [-Wuninitialized]
d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2];
^
../../../src/fluid.c: In function 'gfs_cell_corner_interpolator':
../../../src/fluid.c:3006:13: warning: 'n[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
FttCell * n[N_CELLS];
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo '../../../src/'`variable.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/variable.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo '../../../src/'`output.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/output.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo '../../../src/'`solid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/solid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo '../../../src/'`poisson.c
In file included from /usr/include/math.h:26:0,
from ../../../src/poisson.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo '../../../src/'`advection.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/advection.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo '../../../src/'`boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo '../../../src/'`mpi_boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/mpi_boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo '../../../src/'`timestep.c
In file included from /usr/include/math.h:26:0,
from ../../../src/timestep.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo '../../../src/'`domain.c
In file included from /usr/include/math.h:26:0,
from ../../../src/domain.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo '../../../src/'`init.c
../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo '../../../src/'`refine.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/refine.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo '../../../src/'`event.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/event.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo '../../../src/'`simulation.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/simulation.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo '../../../src/'`graphic.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/graphic.c:30:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/graphic.c: In function 'grow_curve':
../../../src/graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable]
FttVector p1;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo '../../../src/'`adaptive.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/adaptive.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo '../../../src/'`source.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/source.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo '../../../src/'`tension.c
In file included from /usr/include/math.h:26:0,
from ../../../src/tension.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo '../../../src/'`vof.c
In file included from /usr/include/math.h:26:0,
from ../../../src/vof.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/vof.c: In function 'gfs_height_curvature':
../../../src/vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable]
gdouble area = gfs_vof_center (cell, t, &fc);
^
../../../src/vof.c: In function 'gfs_height_curvature_new':
../../../src/vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable]
gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc);
^
../../../src/vof.c: At top level:
../../../src/vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
^
../../../src/vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo '../../../src/'`utils.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/utils.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo '../../../src/'`ocean.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ocean.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/ocean.c: In function 'correct_normal_velocity':
../../../src/ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
FttFaceType type;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo '../../../src/'`wave.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/wave.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo '../../../src/'`levelset.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/levelset.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo '../../../src/'`cartesian.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/cartesian.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo '../../../src/'`surface.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../src/surface.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo '../../../src/'`unstructured.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/unstructured.h:24,
from ../../../src/unstructured.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo '../../../src/'`map.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/advection.h:27,
from ../../../src/timestep.h:27,
from ../../../src/variable.h:29,
from ../../../src/map.h:27,
from ../../../src/map.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/map.c: In function 'gfs_map_read':
../../../src/map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
gboolean class_changed = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo '../../../src/'`river.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/river.c:55:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo '../../../src/'`moving.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/moving.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/moving.c:49:0:
../../../src/moving2.c: In function 'second_order_face_fractions':
../../../src/moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
gdouble dt1, dt2, dto1, dto2, s1, s2;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo '../../../src/'`balance.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/balance.h:27,
from ../../../src/balance.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo '../../../src/'`metric.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/metric.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
static double kpu_2d_l2[5][3] = {
^
../../../src/metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
static double kpu_2d_l4[17][3] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo '../../../src/'`particle.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/particle.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ../../../src/ftt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ftt.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo ../../../src/fluid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/fluid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/fluid.c: In function 'gfs_cell_coarse_fine':
../../../src/fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable]
double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
^
../../../src/fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable]
double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
^
../../../src/fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable]
double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
^
../../../src/fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable]
double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
^
../../../src/fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable]
double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
^
../../../src/fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable]
double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
^
../../../src/fluid.c: In function 'gfs_cell_corner_interpolator':
../../../src/fluid.c:3006:13: warning: 'n[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
FttCell * n[N_CELLS];
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo ../../../src/variable.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/variable.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo ../../../src/output.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/output.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo ../../../src/solid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/solid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/solid.c: In function 'set_solid_fractions_from_surface':
../../../src/solid.c:561:21: warning: comparison between 'FttComponent {aka enum <anonymous>}' and 'enum <anonymous>' [-Wenum-compare]
for (c = 1; c < FTT_NEIGHBORS; c++)
^
In file included from ../../../src/solid.c:338:0:
../../../src/solid.c: At top level:
../../../src/isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable]
static FttVector edge[12][2] = {
^
../../../src/isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
static guint connectv[12][2][4] = {
^
../../../src/isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
static FttVector cvertex[8] = {
^
../../../src/isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable]
static FttDirection corner[8][3] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo ../../../src/poisson.c
In file included from /usr/include/math.h:26:0,
from ../../../src/poisson.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo ../../../src/advection.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/advection.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo ../../../src/boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo ../../../src/mpi_boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/mpi_boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo ../../../src/timestep.c
In file included from /usr/include/math.h:26:0,
from ../../../src/timestep.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo ../../../src/domain.c
In file included from /usr/include/math.h:26:0,
from ../../../src/domain.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo ../../../src/init.c
../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo ../../../src/refine.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/refine.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo ../../../src/event.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/event.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo ../../../src/simulation.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/simulation.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo ../../../src/graphic.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/graphic.c:30:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/graphic.c:42:0:
../../../src/isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable]
static FttVector vertex[8] = {
^
../../../src/isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable]
static guint face[6][4][2] = {
^
../../../src/isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable]
static guint face_v[6][4] = {
^
../../../src/isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
static guint connectv[12][2][4] = {
^
../../../src/isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
static FttVector cvertex[8] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo ../../../src/adaptive.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/adaptive.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo ../../../src/source.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/source.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo ../../../src/tension.c
In file included from /usr/include/math.h:26:0,
from ../../../src/tension.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo ../../../src/vof.c
In file included from /usr/include/math.h:26:0,
from ../../../src/vof.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
^
../../../src/vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
^
../../../src/vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function]
static gdouble neighboring_column (FttCell * cell,
^
../../../src/vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function]
static void curvature_from_h (FttCell * cell, GfsDomain * domain,
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo ../../../src/utils.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/utils.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ../../../src/ocean.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ocean.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/ocean.c: In function 'correct_normal_velocity':
../../../src/ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
FttFaceType type;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo ../../../src/wave.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/wave.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo ../../../src/levelset.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/levelset.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo ../../../src/cartesian.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/cartesian.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo ../../../src/surface.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../src/surface.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo ../../../src/unstructured.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/unstructured.h:24,
from ../../../src/unstructured.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo ../../../src/map.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/advection.h:27,
from ../../../src/timestep.h:27,
from ../../../src/variable.h:29,
from ../../../src/map.h:27,
from ../../../src/map.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/map.c: In function 'gfs_map_read':
../../../src/map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
gboolean class_changed = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo ../../../src/river.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/river.c:55:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo ../../../src/moving.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/moving.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/moving.c:49:0:
../../../src/moving2.c: In function 'second_order_face_fractions':
../../../src/moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
gdouble dt1, dt2, dto1, dto2, s1, s2;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo ../../../src/balance.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/balance.h:27,
from ../../../src/balance.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo ../../../src/metric.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/metric.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
static double kpu_2d_l2[5][3] = {
^
../../../src/metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
static double kpu_2d_l4[17][3] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo ../../../src/particle.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/particle.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo '../../../src/'`gerris.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/gerris.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o ../../../src/gerris.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/gerris.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
Making all in modules
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
Making all in RStarTree
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/RStarTree'
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo '../../../../modules/RStarTree/'`RStarTree.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/RStarTree/RStarTree.c:3:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RStarTree.c: In function 'BasicCheck':
../../../../modules/RStarTree/RStarTree.c:824:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte));
^
../../../../modules/RStarTree/RStarTree.c:831:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int));
^
../../../../modules/RStarTree/RStarTree.c:838:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo));
^
../../../../modules/RStarTree/RStarTree.c:839:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n"," sizeof(int):",sizeof(int));
^
../../../../modules/RStarTree/RStarTree.c:846:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir));
^
../../../../modules/RStarTree/RStarTree.c:847:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock));
^
../../../../modules/RStarTree/RStarTree.c:854:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters));
^
../../../../modules/RStarTree/RStarTree.c:855:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n"," sizeof(typfixblock):",sizeof(typfixblock));
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo '../../../../modules/RStarTree/'`RSTInstDel.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTInstDel.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RSTInstDel.c: In function 'SplitAndDistributData':
../../../../modules/RStarTree/RSTInstDel.c:748:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
axisindex;
^
../../../../modules/RStarTree/RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (axis != (*par).maxdim || axsortside != currsortside) {
^
../../../../modules/RStarTree/RSTInstDel.c:744:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
Side sortside, currsortside, axsortside;
^
../../../../modules/RStarTree/RSTInstDel.c:940:16: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (value < backvalvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:952:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (backvalvalue <= validvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:938:24: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
backvaledge= backvaledge+edge;
^
../../../../modules/RStarTree/RSTInstDel.c:956:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
validedge= validedge+backvaledge;
^
../../../../modules/RStarTree/RSTInstDel.c: In function 'SplitAndDistributDir':
../../../../modules/RStarTree/RSTInstDel.c:482:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
axisindex;
^
../../../../modules/RStarTree/RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (axis != (*par).maxdim || axsortside != currsortside) {
^
../../../../modules/RStarTree/RSTInstDel.c:478:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
Side sortside, currsortside, axsortside;
^
../../../../modules/RStarTree/RSTInstDel.c:674:16: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (value < backvalvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:686:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (backvalvalue <= validvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:672:24: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
backvaledge= backvaledge+edge;
^
../../../../modules/RStarTree/RSTInstDel.c:690:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
validedge= validedge+backvaledge;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo '../../../../modules/RStarTree/'`RSTJoin.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTJoin.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo '../../../../modules/RStarTree/'`RSTUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTUtil.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RSTUtil.c: In function 'Covers':
../../../../modules/RStarTree/RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable]
int maxdim;
^
../../../../modules/RStarTree/RSTUtil.c: In function 'ChooseSubtree':
../../../../modules/RStarTree/RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable]
int maxexam, inv;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo '../../../../modules/RStarTree/'`RSTInOut.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTInOut.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo '../../../../modules/RStarTree/'`RSTInterUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTInterUtil.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RSTInterUtil.c: In function 'SetCheckDir':
../../../../modules/RStarTree/RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable]
PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries;
^
../../../../modules/RStarTree/RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable]
PACKEDdirentrylen, REALdirentrylen,
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo '../../../../modules/RStarTree/'`RSTQuery.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTQuery.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libcSmRST.la libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo
ar: `u' modifier ignored since `D' is the default (see `U')
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/RStarTree'
Making all in kdt
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/kdt'
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo '../../../../modules/kdt/'`kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/kdt/kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function]
static void kdt_write (KdtHeap * h, FILE * fp)
^
../../../../modules/kdt/kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function]
static void kdt_rect_write (const KdtRect rect, FILE * fp)
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libkdt.la libkdt_la-kdt.lo
ar: `u' modifier ignored since `D' is the default (see `U')
gcc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo '../../../../modules/kdt/'`xyz2kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/xyz2kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm
gcc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo '../../../../modules/kdt/'`kdt2kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/kdt2kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm
gcc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo '../../../../modules/kdt/'`kdtquery.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/kdtquery.c:21:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o kdtquery kdtquery-kdtquery.o -lkdt -lm
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/kdt'
Making all in fes2004
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/fes2004'
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo '../../../../modules/fes2004/'`fes2004_alloc.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_alloc.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo '../../../../modules/fes2004/'`fes2004_error.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_error.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_error.c:4:6: warning: no previous prototype for 'print_error_1' [-Wmissing-prototypes]
void print_error_1()
^
../../../../modules/fes2004/fes2004_error.c:11:6: warning: no previous prototype for 'print_error_2' [-Wmissing-prototypes]
void print_error_2()
^
../../../../modules/fes2004/fes2004_error.c:18:6: warning: no previous prototype for 'print_error_3' [-Wmissing-prototypes]
void print_error_3(char *message)
^
../../../../modules/fes2004/fes2004_error.c:25:6: warning: no previous prototype for 'print_error_4' [-Wmissing-prototypes]
void print_error_4(char *message)
^
../../../../modules/fes2004/fes2004_error.c:32:6: warning: no previous prototype for 'print_error_5' [-Wmissing-prototypes]
void print_error_5(char *message)
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo '../../../../modules/fes2004/'`fes2004_extraction.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_extraction.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo '../../../../modules/fes2004/'`fes2004_init.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_init.c:2:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_init.c: In function 'init_spectrum':
../../../../modules/fes2004/fes2004_init.c:42:7: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
int rstatus;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo '../../../../modules/fes2004/'`fes2004_io.c
In file included from /usr/include/errno.h:28:0,
from /usr/include/netcdf.h:16,
from ../../../../modules/fes2004/fes2004_io.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_io.c: In function 'load_netcdf_fes2004_data':
../../../../modules/fes2004/fes2004_io.c:16:9: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
int i,rstatus;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo '../../../../modules/fes2004/'`fes2004_prediction.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_prediction.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo '../../../../modules/fes2004/'`fes2004_kernel.c
In file included from /usr/include/errno.h:28:0,
from /usr/include/netcdf.h:16,
from ../../../../modules/fes2004/fes2004_kernel.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'pred_coeur':
../../../../modules/fes2004/fes2004_kernel.c:115:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
double pi;
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'extract_coeur':
../../../../modules/fes2004/fes2004_kernel.c:191:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
double pi;
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'compute_admittance':
../../../../modules/fes2004/fes2004_kernel.c:457:11: warning: variable 'gsl_out' set but not used [-Wunused-but-set-variable]
int i,n,gsl_out;
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'astronomic_angle':
../../../../modules/fes2004/fes2004_kernel.c:663:16: warning: variable 'sin2I' set but not used [-Wunused-but-set-variable]
double t2,t4,sin2I,s2;
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libfes.la libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo
ar: `u' modifier ignored since `D' is the default (see `U')
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/fes2004'
Making all in wavewatch
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/wavewatch'
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/wavewatch'
Making all in culvert
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/culvert'
/bin/bash ../../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo '../../../../modules/culvert/'`boyd87.c
In file included from /usr/include/math.h:26:0,
from ../../../../modules/culvert/boyd87.c:9:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libboyd87.la libboyd87_la-boyd87.lo
ar: `u' modifier ignored since `D' is the default (see `U')
gcc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo '../../../../modules/culvert/'`check_inlet.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/culvert/check_inlet.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm
gcc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo '../../../../modules/culvert/'`check_outlet.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/culvert/check_outlet.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm
gcc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo '../../../../modules/culvert/'`discharge_table.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/culvert/discharge_table.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo '../../../modules/'`particulatecommon.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/particulatecommon.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulatecommon2D.la libparticulatecommon2D_la-particulatecommon.lo
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo '../../../modules/'`particulatecommon.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/particulatecommon.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulatecommon3D.la libparticulatecommon3D_la-particulatecommon.lo
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo '../../../modules/'`terrain.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/terrain.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo ../../../modules/terrain.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/terrain.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo '../../../modules/'`particulates.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/particulates.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo '../../../modules/'`particulates.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/particulates.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo '../../../modules/'`okada.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../modules/okada.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo '../../../modules/'`okada.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../modules/okada.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo '../../../modules/'`df3.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/df3.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo '../../../modules/'`electrohydro.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/electrohydro.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo '../../../modules/'`electrohydro.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/electrohydro.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo '../../../modules/'`skewsymmetric.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/skewsymmetric.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/skewsymmetric.c: In function 'gfs_skew_symmetric_run':
../../../modules/skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION];
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo '../../../modules/'`skewsymmetric.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/skewsymmetric.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/skewsymmetric.c: In function 'gfs_skew_symmetric_run':
../../../modules/skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION];
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo '../../../modules/'`topics.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/solid.h:23,
from ../../../modules/topics.c:21:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/timestep.h:29:0,
from ../../../src/simulation.h:28,
from ../../../src/event.h:53,
from ../../../src/solid.h:26,
from ../../../modules/topics.c:21:
../../../modules/topics.c: In function 'print_interface':
../../../modules/topics.c:1139:38: warning: array subscript is above array bounds [-Warray-bounds]
double nz = GFS_VALUE(cell, tv->m[2]);
^
../../../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE'
#define GFS_VALUE(cell,v) ((&GFS_STATE (cell)->place_holder)[(v)->i])
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo '../../../modules/'`topics.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/solid.h:23,
from ../../../modules/topics.c:21:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo '../../../modules/'`culvert.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/source.h:27,
from ../../../src/river.h:27,
from ../../../modules/culvert.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lculvert -lboyd87 -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo '../../../modules/'`layered.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/layered.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo '../../../modules/'`tide.c
In file included from /usr/include/string.h:25:0,
from ../../../modules/tide.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo '../../../modules/'`tide.c
In file included from /usr/include/string.h:25:0,
from ../../../modules/tide.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo '../../../modules/'`stokes.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/stokes.c:19:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=F77 --mode=compile f77 -g -O2 -fstack-protector-strong -c -o CW263.lo ../../../modules/CW263.f
/bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo '../../../modules/'`stokes.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/stokes.c:19:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo '../../../modules/'`bubbles.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/bubbles.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/bubbles.c: In function 'bubble_fraction_init':
../../../modules/bubbles.c:421:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
^
../../../modules/bubbles.c: In function 'bubble_fraction_dt_init':
../../../modules/bubbles.c:474:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo '../../../modules/'`bubbles.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/bubbles.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/bubbles.c: In function 'bubble_fraction_init':
../../../modules/bubbles.c:421:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
^
../../../modules/bubbles.c: In function 'bubble_fraction_dt_init':
../../../modules/bubbles.c:474:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo '../../../modules/'`rsurface2kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/rsurface2kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
gcc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo '../../../modules/'`rsurface.c
In file included from /usr/include/stdio.h:27:0,
from ../../../modules/rsurface.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../modules/rsurface.c:5:0:
../../../modules/rsurface.h:16:1: warning: no semicolon at end of struct or union
} RSurfaceSum;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm
libtool: warning: '-version-info' is ignored for programs
libtool: warning: '-release' is ignored for programs
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
Making all in tools
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/tools'
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo '../../../tools/'`gfs2oogl.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfs2oogl.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfs2oogl.c: In function 'main':
../../../tools/gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
streamname = g_strdup (g_basename (optarg));
^
In file included from /usr/include/glib-2.0/glib.h:48:0,
from /usr/include/gts.h:24,
from ../../../src/init.h:23,
from ../../../tools/gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:168:14: note: declared here
const gchar *g_basename (const gchar *file_name);
^
../../../tools/gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable]
gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
^
../../../tools/gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable]
gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o ../../../tools/gfs2oogl.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfs2oogl.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfs2oogl.c: In function 'main':
../../../tools/gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
streamname = g_strdup (g_basename (optarg));
^
In file included from /usr/include/glib-2.0/glib.h:48:0,
from /usr/include/gts.h:24,
from ../../../src/init.h:23,
from ../../../tools/gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:168:14: note: declared here
const gchar *g_basename (const gchar *file_name);
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o ../../../tools/streamanime.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/streamanime.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo '../../../tools/'`ppmcombine.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/ppmcombine.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/ppmcombine.c: In function 'main':
../../../tools/ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable]
gboolean verbose = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo '../../../tools/'`gfscompare.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscompare.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfscompare.c: In function 'main':
../../../tools/gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
gboolean no_check = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o ../../../tools/gfscompare.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscompare.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfscompare.c: In function 'main':
../../../tools/gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
gboolean no_check = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo '../../../tools/'`gfscombine.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscombine.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o ../../../tools/gfscombine.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscombine.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo '../../../tools/'`gfsjoin2.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../tools/gfsjoin2.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o ../../../tools/gfsjoin2.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../tools/gfsjoin2.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o ../../../tools/shapes.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../tools/shapes.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function]
static void surface_add_rectangular_channel_shape (GtsSurface * s,
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o shapes shapes.o -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/tools'
Making all in test
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/test'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/test'
Making all in doc
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps
ls: cannot access ../src/*.[ch]: No such file or directory
Making all in tutorial
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
/bin/bash: tutorial.tex: No such file or directory
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/tutorial'
Making all in examples
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
gcc -DHAVE_CONFIG_H -I. -I../../../../doc/examples -I../.. -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo '../../../../doc/examples/'`classes.c
In file included from /usr/include/string.h:25:0,
from ../../../../doc/examples/classes.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
gcc -DHAVE_CONFIG_H -I. -I../../../../doc/examples -I../.. -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../../../src/init.c' || echo '../../../../doc/examples/'`../../../../src/init.c
../../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
gcc -DHAVE_CONFIG_H -I. -I../../../../doc/examples -I../.. -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo '../../../../doc/examples/'`modules.c
In file included from /usr/include/limits.h:25:0,
from /usr/lib/gcc/arm-linux-gnueabihf/5/include-fixed/limits.h:168,
from /usr/lib/gcc/arm-linux-gnueabihf/5/include-fixed/syslimits.h:7,
from /usr/lib/gcc/arm-linux-gnueabihf/5/include-fixed/limits.h:34,
from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11,
from /usr/include/glib-2.0/glib/gtypes.h:32,
from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/glib-2.0/gmodule.h:28,
from ../../../../doc/examples/modules.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
./modules ../../../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list
(./classes && sh ../../../../doc/examples/modulesyms.sh ../../../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic
echo "# Language file for source-highlight" > gfs.lang
echo "# Generated automatically by classes.c" >> gfs.lang
awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang
echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang
echo "comment start \"#\"" >> gfs.lang
echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang
echo "(defvar gfs-abbrevs '(" > gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el
echo "(defvar gfs-modules '(" >> gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el
echo "(provide 'gfs-keywords)" >> gfs-keywords.el
sh ../../../../doc/examples/gfs.php.sh > gfs.php
make all-am
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
make[6]: Nothing to be done for 'all-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
Making all in manpages
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/manpages'
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
gcc -DHAVE_CONFIG_H -I. -I../../../doc -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo '../../../doc/'`autoclass.c
In file included from /usr/include/string.h:25:0,
from ../../../doc/autoclass.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../doc/autoclass.c: In function 'main':
../../../doc/autoclass.c:6:21: warning: variable 'klass' set but not used [-Wunused-but-set-variable]
GtsObjectClass ** klass;
^
gcc -DHAVE_CONFIG_H -I. -I../../../doc -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../../../src/init.c' || echo '../../../doc/'`../../../src/init.c
../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link gcc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
Making all in desktop
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/desktop'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/desktop'
Making all in debian
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/debian'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
dh_auto_build --builddirectory=debian/build-mpi
make -j1
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make all-recursive
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
Making all in src
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
make all-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo '../../../src/'`ftt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ftt.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo '../../../src/'`fluid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/fluid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function]
static GfsGradient interpolate_1D2 (FttCell * cell,
^
../../../src/fluid.c: In function 'face_bilinear':
../../../src/fluid.c:1151:37: warning: 'd[2]' is used uninitialized in this function [-Wuninitialized]
d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2];
^
../../../src/fluid.c: In function 'gfs_cell_corner_interpolator':
../../../src/fluid.c:3006:13: warning: 'n[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
FttCell * n[N_CELLS];
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo '../../../src/'`variable.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/variable.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo '../../../src/'`output.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/output.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo '../../../src/'`solid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/solid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo '../../../src/'`poisson.c
In file included from /usr/include/math.h:26:0,
from ../../../src/poisson.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo '../../../src/'`advection.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/advection.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo '../../../src/'`boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo '../../../src/'`mpi_boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/mpi_boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/mpi_boundary.c: In function 'gfs_boundary_mpi_init':
../../../src/mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get is superseded by MPI_Comm_get_attr in MPI-2.0 [-Wdeprecated-declarations]
MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag);
^
In file included from ../../../src/utils.h:34:0,
from ../../../src/boundary.h:24,
from ../../../src/domain.h:23,
from ../../../src/mpi_boundary.c:24:
/usr/lib/openmpi/include/mpi.h:1227:20: note: declared here
OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo '../../../src/'`timestep.c
In file included from /usr/include/math.h:26:0,
from ../../../src/timestep.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo '../../../src/'`domain.c
In file included from /usr/include/math.h:26:0,
from ../../../src/domain.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo '../../../src/'`init.c
../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/init.c: In function 'gfs_init':
../../../src/init.c:416:5: warning: 'MPI_Errhandler_set' is deprecated: MPI_Errhandler_set is superseded by MPI_Comm_set_errhandler in MPI-2.0 [-Wdeprecated-declarations]
MPI_Errhandler_set (MPI_COMM_WORLD, MPI_ERRORS_ARE_FATAL);
^
In file included from ../../../src/utils.h:34:0,
from ../../../src/boundary.h:24,
from ../../../src/init.c:49:
/usr/lib/openmpi/include/mpi.h:1339:20: note: declared here
OMPI_DECLSPEC int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler)
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo '../../../src/'`refine.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/refine.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo '../../../src/'`event.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/event.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo '../../../src/'`simulation.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/simulation.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo '../../../src/'`graphic.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/graphic.c:30:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/graphic.c: In function 'grow_curve':
../../../src/graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable]
FttVector p1;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo '../../../src/'`adaptive.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/adaptive.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo '../../../src/'`source.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/source.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo '../../../src/'`tension.c
In file included from /usr/include/math.h:26:0,
from ../../../src/tension.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo '../../../src/'`vof.c
In file included from /usr/include/math.h:26:0,
from ../../../src/vof.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/vof.c: In function 'gfs_height_curvature':
../../../src/vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable]
gdouble area = gfs_vof_center (cell, t, &fc);
^
../../../src/vof.c: In function 'gfs_height_curvature_new':
../../../src/vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable]
gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc);
^
../../../src/vof.c: At top level:
../../../src/vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
^
../../../src/vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo '../../../src/'`utils.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/utils.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo '../../../src/'`ocean.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ocean.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/ocean.c: In function 'correct_normal_velocity':
../../../src/ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
FttFaceType type;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo '../../../src/'`wave.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/wave.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo '../../../src/'`levelset.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/levelset.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo '../../../src/'`cartesian.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/cartesian.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo '../../../src/'`surface.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../src/surface.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo '../../../src/'`unstructured.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/unstructured.h:24,
from ../../../src/unstructured.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo '../../../src/'`map.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/advection.h:27,
from ../../../src/timestep.h:27,
from ../../../src/variable.h:29,
from ../../../src/map.h:27,
from ../../../src/map.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/map.c: In function 'gfs_map_read':
../../../src/map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
gboolean class_changed = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo '../../../src/'`river.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/river.c:55:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo '../../../src/'`moving.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/moving.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/moving.c:49:0:
../../../src/moving2.c: In function 'second_order_face_fractions':
../../../src/moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
gdouble dt1, dt2, dto1, dto2, s1, s2;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo '../../../src/'`balance.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/balance.h:27,
from ../../../src/balance.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo '../../../src/'`metric.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/metric.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
static double kpu_2d_l2[5][3] = {
^
../../../src/metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
static double kpu_2d_l4[17][3] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo '../../../src/'`particle.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/particle.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ../../../src/ftt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ftt.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo ../../../src/fluid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/fluid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/fluid.c: In function 'gfs_cell_coarse_fine':
../../../src/fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable]
double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
^
../../../src/fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable]
double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
^
../../../src/fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable]
double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
^
../../../src/fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable]
double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
^
../../../src/fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable]
double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
^
../../../src/fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable]
double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
^
../../../src/fluid.c: In function 'gfs_cell_corner_interpolator':
../../../src/fluid.c:3006:13: warning: 'n[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
FttCell * n[N_CELLS];
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo ../../../src/variable.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/variable.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo ../../../src/output.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/output.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo ../../../src/solid.c
In file included from /usr/include/math.h:26:0,
from ../../../src/solid.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/solid.c: In function 'set_solid_fractions_from_surface':
../../../src/solid.c:561:21: warning: comparison between 'FttComponent {aka enum <anonymous>}' and 'enum <anonymous>' [-Wenum-compare]
for (c = 1; c < FTT_NEIGHBORS; c++)
^
In file included from ../../../src/solid.c:338:0:
../../../src/solid.c: At top level:
../../../src/isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable]
static FttVector edge[12][2] = {
^
../../../src/isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
static guint connectv[12][2][4] = {
^
../../../src/isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
static FttVector cvertex[8] = {
^
../../../src/isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable]
static FttDirection corner[8][3] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo ../../../src/poisson.c
In file included from /usr/include/math.h:26:0,
from ../../../src/poisson.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo ../../../src/advection.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/advection.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo ../../../src/boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo ../../../src/mpi_boundary.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/mpi_boundary.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/mpi_boundary.c: In function 'gfs_boundary_mpi_init':
../../../src/mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get is superseded by MPI_Comm_get_attr in MPI-2.0 [-Wdeprecated-declarations]
MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag);
^
In file included from ../../../src/utils.h:34:0,
from ../../../src/boundary.h:24,
from ../../../src/domain.h:23,
from ../../../src/mpi_boundary.c:24:
/usr/lib/openmpi/include/mpi.h:1227:20: note: declared here
OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo ../../../src/timestep.c
In file included from /usr/include/math.h:26:0,
from ../../../src/timestep.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo ../../../src/domain.c
In file included from /usr/include/math.h:26:0,
from ../../../src/domain.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo ../../../src/init.c
../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/init.c: In function 'gfs_init':
../../../src/init.c:416:5: warning: 'MPI_Errhandler_set' is deprecated: MPI_Errhandler_set is superseded by MPI_Comm_set_errhandler in MPI-2.0 [-Wdeprecated-declarations]
MPI_Errhandler_set (MPI_COMM_WORLD, MPI_ERRORS_ARE_FATAL);
^
In file included from ../../../src/utils.h:34:0,
from ../../../src/boundary.h:24,
from ../../../src/init.c:49:
/usr/lib/openmpi/include/mpi.h:1339:20: note: declared here
OMPI_DECLSPEC int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler)
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo ../../../src/refine.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/refine.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo ../../../src/event.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/event.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo ../../../src/simulation.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/simulation.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo ../../../src/graphic.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/graphic.c:30:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/graphic.c:42:0:
../../../src/isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable]
static FttVector vertex[8] = {
^
../../../src/isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable]
static guint face[6][4][2] = {
^
../../../src/isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable]
static guint face_v[6][4] = {
^
../../../src/isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
static guint connectv[12][2][4] = {
^
../../../src/isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
static FttVector cvertex[8] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo ../../../src/adaptive.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/adaptive.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo ../../../src/source.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/source.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo ../../../src/tension.c
In file included from /usr/include/math.h:26:0,
from ../../../src/tension.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo ../../../src/vof.c
In file included from /usr/include/math.h:26:0,
from ../../../src/vof.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
^
../../../src/vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
^
../../../src/vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function]
static gdouble neighboring_column (FttCell * cell,
^
../../../src/vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function]
static void curvature_from_h (FttCell * cell, GfsDomain * domain,
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo ../../../src/utils.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/utils.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ../../../src/ocean.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/ocean.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/ocean.c: In function 'correct_normal_velocity':
../../../src/ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
FttFaceType type;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo ../../../src/wave.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/wave.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo ../../../src/levelset.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/levelset.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo ../../../src/cartesian.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/cartesian.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo ../../../src/surface.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../src/surface.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo ../../../src/unstructured.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/unstructured.h:24,
from ../../../src/unstructured.c:24:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo ../../../src/map.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/advection.h:27,
from ../../../src/timestep.h:27,
from ../../../src/variable.h:29,
from ../../../src/map.h:27,
from ../../../src/map.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/map.c: In function 'gfs_map_read':
../../../src/map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
gboolean class_changed = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo ../../../src/river.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/river.c:55:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo ../../../src/moving.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/moving.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/moving.c:49:0:
../../../src/moving2.c: In function 'second_order_face_fractions':
../../../src/moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
gdouble dt1, dt2, dto1, dto2, s1, s2;
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo ../../../src/balance.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/balance.h:27,
from ../../../src/balance.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo ../../../src/metric.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/metric.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
static double kpu_2d_l2[5][3] = {
^
../../../src/metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
static double kpu_2d_l4[17][3] = {
^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo ../../../src/particle.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/particle.c:23:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo '../../../src/'`gerris.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/gerris.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../src -I.. -I../../.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o ../../../src/gerris.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../src/gerris.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
Making all in modules
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
Making all in RStarTree
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/RStarTree'
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo '../../../../modules/RStarTree/'`RStarTree.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/RStarTree/RStarTree.c:3:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RStarTree.c: In function 'BasicCheck':
../../../../modules/RStarTree/RStarTree.c:824:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte));
^
../../../../modules/RStarTree/RStarTree.c:831:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int));
^
../../../../modules/RStarTree/RStarTree.c:838:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo));
^
../../../../modules/RStarTree/RStarTree.c:839:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n"," sizeof(int):",sizeof(int));
^
../../../../modules/RStarTree/RStarTree.c:846:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir));
^
../../../../modules/RStarTree/RStarTree.c:847:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock));
^
../../../../modules/RStarTree/RStarTree.c:854:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters));
^
../../../../modules/RStarTree/RStarTree.c:855:20: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
fprintf(stderr,"%s %ld\n"," sizeof(typfixblock):",sizeof(typfixblock));
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo '../../../../modules/RStarTree/'`RSTInstDel.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTInstDel.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RSTInstDel.c: In function 'SplitAndDistributData':
../../../../modules/RStarTree/RSTInstDel.c:748:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
axisindex;
^
../../../../modules/RStarTree/RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (axis != (*par).maxdim || axsortside != currsortside) {
^
../../../../modules/RStarTree/RSTInstDel.c:744:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
Side sortside, currsortside, axsortside;
^
../../../../modules/RStarTree/RSTInstDel.c:940:16: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (value < backvalvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:952:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (backvalvalue <= validvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:938:24: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
backvaledge= backvaledge+edge;
^
../../../../modules/RStarTree/RSTInstDel.c:956:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
validedge= validedge+backvaledge;
^
../../../../modules/RStarTree/RSTInstDel.c: In function 'SplitAndDistributDir':
../../../../modules/RStarTree/RSTInstDel.c:482:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
axisindex;
^
../../../../modules/RStarTree/RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (axis != (*par).maxdim || axsortside != currsortside) {
^
../../../../modules/RStarTree/RSTInstDel.c:478:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
Side sortside, currsortside, axsortside;
^
../../../../modules/RStarTree/RSTInstDel.c:674:16: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (value < backvalvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:686:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (backvalvalue <= validvalue) {
^
../../../../modules/RStarTree/RSTInstDel.c:672:24: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
backvaledge= backvaledge+edge;
^
../../../../modules/RStarTree/RSTInstDel.c:690:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
validedge= validedge+backvaledge;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo '../../../../modules/RStarTree/'`RSTJoin.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTJoin.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo '../../../../modules/RStarTree/'`RSTUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTUtil.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RSTUtil.c: In function 'Covers':
../../../../modules/RStarTree/RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable]
int maxdim;
^
../../../../modules/RStarTree/RSTUtil.c: In function 'ChooseSubtree':
../../../../modules/RStarTree/RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable]
int maxexam, inv;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo '../../../../modules/RStarTree/'`RSTInOut.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTInOut.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo '../../../../modules/RStarTree/'`RSTInterUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTInterUtil.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/RStarTree/RSTInterUtil.c: In function 'SetCheckDir':
../../../../modules/RStarTree/RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable]
PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries;
^
../../../../modules/RStarTree/RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable]
PACKEDdirentrylen, REALdirentrylen,
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/RStarTree -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo '../../../../modules/RStarTree/'`RSTQuery.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
from ../../../../modules/RStarTree/RStarTree.h:28,
from ../../../../modules/RStarTree/RSTQuery.c:4:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libcSmRST.la libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo
ar: `u' modifier ignored since `D' is the default (see `U')
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/RStarTree'
Making all in kdt
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/kdt'
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo '../../../../modules/kdt/'`kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/kdt/kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function]
static void kdt_write (KdtHeap * h, FILE * fp)
^
../../../../modules/kdt/kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function]
static void kdt_rect_write (const KdtRect rect, FILE * fp)
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libkdt.la libkdt_la-kdt.lo
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo '../../../../modules/kdt/'`xyz2kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/xyz2kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm
mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo '../../../../modules/kdt/'`kdt2kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/kdt2kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm
mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/kdt -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo '../../../../modules/kdt/'`kdtquery.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../../modules/kdt/kdtquery.c:21:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o kdtquery kdtquery-kdtquery.o -lkdt -lm
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/kdt'
Making all in fes2004
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/fes2004'
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo '../../../../modules/fes2004/'`fes2004_alloc.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_alloc.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo '../../../../modules/fes2004/'`fes2004_error.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_error.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_error.c:4:6: warning: no previous prototype for 'print_error_1' [-Wmissing-prototypes]
void print_error_1()
^
../../../../modules/fes2004/fes2004_error.c:11:6: warning: no previous prototype for 'print_error_2' [-Wmissing-prototypes]
void print_error_2()
^
../../../../modules/fes2004/fes2004_error.c:18:6: warning: no previous prototype for 'print_error_3' [-Wmissing-prototypes]
void print_error_3(char *message)
^
../../../../modules/fes2004/fes2004_error.c:25:6: warning: no previous prototype for 'print_error_4' [-Wmissing-prototypes]
void print_error_4(char *message)
^
../../../../modules/fes2004/fes2004_error.c:32:6: warning: no previous prototype for 'print_error_5' [-Wmissing-prototypes]
void print_error_5(char *message)
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo '../../../../modules/fes2004/'`fes2004_extraction.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_extraction.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo '../../../../modules/fes2004/'`fes2004_init.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_init.c:2:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_init.c: In function 'init_spectrum':
../../../../modules/fes2004/fes2004_init.c:42:7: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
int rstatus;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo '../../../../modules/fes2004/'`fes2004_io.c
In file included from /usr/include/errno.h:28:0,
from /usr/include/netcdf.h:16,
from ../../../../modules/fes2004/fes2004_io.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_io.c: In function 'load_netcdf_fes2004_data':
../../../../modules/fes2004/fes2004_io.c:16:9: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
int i,rstatus;
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo '../../../../modules/fes2004/'`fes2004_prediction.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/fes2004/fes2004_lib.h:12,
from ../../../../modules/fes2004/fes2004_prediction.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/fes2004 -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo '../../../../modules/fes2004/'`fes2004_kernel.c
In file included from /usr/include/errno.h:28:0,
from /usr/include/netcdf.h:16,
from ../../../../modules/fes2004/fes2004_kernel.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'pred_coeur':
../../../../modules/fes2004/fes2004_kernel.c:115:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
double pi;
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'extract_coeur':
../../../../modules/fes2004/fes2004_kernel.c:191:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
double pi;
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'compute_admittance':
../../../../modules/fes2004/fes2004_kernel.c:457:11: warning: variable 'gsl_out' set but not used [-Wunused-but-set-variable]
int i,n,gsl_out;
^
../../../../modules/fes2004/fes2004_kernel.c: In function 'astronomic_angle':
../../../../modules/fes2004/fes2004_kernel.c:663:16: warning: variable 'sin2I' set but not used [-Wunused-but-set-variable]
double t2,t4,sin2I,s2;
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libfes.la libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo
ar: `u' modifier ignored since `D' is the default (see `U')
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/fes2004'
Making all in wavewatch
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/wavewatch'
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/wavewatch'
Making all in culvert
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/culvert'
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo '../../../../modules/culvert/'`boyd87.c
In file included from /usr/include/math.h:26:0,
from ../../../../modules/culvert/boyd87.c:9:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o libboyd87.la libboyd87_la-boyd87.lo
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo '../../../../modules/culvert/'`check_inlet.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/culvert/check_inlet.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm
mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo '../../../../modules/culvert/'`check_outlet.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/culvert/check_outlet.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm
mpicc -DHAVE_CONFIG_H -I. -I../../../../modules/culvert -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo '../../../../modules/culvert/'`discharge_table.c
In file included from /usr/include/stdio.h:27:0,
from ../../../../modules/culvert/discharge_table.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo '../../../modules/'`particulatecommon.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/particulatecommon.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulatecommon2D.la libparticulatecommon2D_la-particulatecommon.lo
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo '../../../modules/'`particulatecommon.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/particulatecommon.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulatecommon3D.la libparticulatecommon3D_la-particulatecommon.lo
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo '../../../modules/'`terrain.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/terrain.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo ../../../modules/terrain.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/terrain.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo '../../../modules/'`particulates.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/particulates.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo '../../../modules/'`particulates.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/particulates.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo '../../../modules/'`okada.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../modules/okada.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo '../../../modules/'`okada.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../modules/okada.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo '../../../modules/'`df3.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/df3.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo '../../../modules/'`electrohydro.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/electrohydro.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo '../../../modules/'`electrohydro.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/electrohydro.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo '../../../modules/'`skewsymmetric.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/skewsymmetric.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/skewsymmetric.c: In function 'gfs_skew_symmetric_run':
../../../modules/skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION];
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo '../../../modules/'`skewsymmetric.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/skewsymmetric.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/skewsymmetric.c: In function 'gfs_skew_symmetric_run':
../../../modules/skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION];
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo '../../../modules/'`topics.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/solid.h:23,
from ../../../modules/topics.c:21:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../src/timestep.h:29:0,
from ../../../src/simulation.h:28,
from ../../../src/event.h:53,
from ../../../src/solid.h:26,
from ../../../modules/topics.c:21:
../../../modules/topics.c: In function 'print_interface':
../../../modules/topics.c:1139:38: warning: array subscript is above array bounds [-Warray-bounds]
double nz = GFS_VALUE(cell, tv->m[2]);
^
../../../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE'
#define GFS_VALUE(cell,v) ((&GFS_STATE (cell)->place_holder)[(v)->i])
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo '../../../modules/'`topics.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/solid.h:23,
from ../../../modules/topics.c:21:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo '../../../modules/'`culvert.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/source.h:27,
from ../../../src/river.h:27,
from ../../../modules/culvert.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lculvert -lboyd87 -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo '../../../modules/'`layered.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/fluid.h:23,
from ../../../src/boundary.h:23,
from ../../../src/domain.h:23,
from ../../../src/simulation.h:27,
from ../../../modules/layered.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo '../../../modules/'`tide.c
In file included from /usr/include/string.h:25:0,
from ../../../modules/tide.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo '../../../modules/'`tide.c
In file included from /usr/include/string.h:25:0,
from ../../../modules/tide.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo '../../../modules/'`stokes.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/stokes.c:19:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=F77 --mode=compile f77 -g -O2 -fstack-protector-strong -c -o CW263.lo ../../../modules/CW263.f
/bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo '../../../modules/'`stokes.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/stokes.c:19:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo '../../../modules/'`bubbles.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/bubbles.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/bubbles.c: In function 'bubble_fraction_init':
../../../modules/bubbles.c:421:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
^
../../../modules/bubbles.c: In function 'bubble_fraction_dt_init':
../../../modules/bubbles.c:474:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo '../../../modules/'`bubbles.c
In file included from /usr/include/stdio.h:27:0,
from /usr/include/gts.h:23,
from ../../../src/event.h:27,
from ../../../src/particle.h:27,
from ../../../modules/particulatecommon.h:20,
from ../../../modules/bubbles.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../modules/bubbles.c: In function 'bubble_fraction_init':
../../../modules/bubbles.c:421:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
^
../../../modules/bubbles.c: In function 'bubble_fraction_dt_init':
../../../modules/bubbles.c:474:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo '../../../modules/'`rsurface2kdt.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../modules/rsurface2kdt.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
mpicc -DHAVE_CONFIG_H -I. -I../../../modules -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo '../../../modules/'`rsurface.c
In file included from /usr/include/stdio.h:27:0,
from ../../../modules/rsurface.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
In file included from ../../../modules/rsurface.c:5:0:
../../../modules/rsurface.h:16:1: warning: no semicolon at end of struct or union
} RSurfaceSum;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm
libtool: warning: '-version-info' is ignored for programs
libtool: warning: '-release' is ignored for programs
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
Making all in tools
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/tools'
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo '../../../tools/'`gfs2oogl.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfs2oogl.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfs2oogl.c: In function 'main':
../../../tools/gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
streamname = g_strdup (g_basename (optarg));
^
In file included from /usr/include/glib-2.0/glib.h:48:0,
from /usr/include/gts.h:24,
from ../../../src/init.h:23,
from ../../../tools/gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:168:14: note: declared here
const gchar *g_basename (const gchar *file_name);
^
../../../tools/gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable]
gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
^
../../../tools/gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable]
gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o ../../../tools/gfs2oogl.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfs2oogl.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfs2oogl.c: In function 'main':
../../../tools/gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
streamname = g_strdup (g_basename (optarg));
^
In file included from /usr/include/glib-2.0/glib.h:48:0,
from /usr/include/gts.h:24,
from ../../../src/init.h:23,
from ../../../tools/gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:168:14: note: declared here
const gchar *g_basename (const gchar *file_name);
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o ../../../tools/streamanime.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/streamanime.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo '../../../tools/'`ppmcombine.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/ppmcombine.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/ppmcombine.c: In function 'main':
../../../tools/ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable]
gboolean verbose = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo '../../../tools/'`gfscompare.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscompare.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfscompare.c: In function 'main':
../../../tools/gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
gboolean no_check = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o ../../../tools/gfscompare.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscompare.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/gfscompare.c: In function 'main':
../../../tools/gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
gboolean no_check = FALSE;
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo '../../../tools/'`gfscombine.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscombine.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o ../../../tools/gfscombine.c
In file included from /usr/include/math.h:26:0,
from ../../../tools/gfscombine.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo '../../../tools/'`gfsjoin2.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../tools/gfsjoin2.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o ../../../tools/gfsjoin2.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../tools/gfsjoin2.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../tools -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o ../../../tools/shapes.c
In file included from /usr/include/stdlib.h:24:0,
from ../../../tools/shapes.c:20:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../tools/shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function]
static void surface_add_rectangular_channel_shape (GtsSurface * s,
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o shapes shapes.o -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/tools'
Making all in test
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/test'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/test'
Making all in doc
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps
ls: cannot access ../src/*.[ch]: No such file or directory
Making all in tutorial
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
/bin/bash: tutorial.tex: No such file or directory
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/tutorial'
Making all in examples
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
mpicc -DHAVE_CONFIG_H -I. -I../../../../doc/examples -I../.. -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo '../../../../doc/examples/'`classes.c
In file included from /usr/include/string.h:25:0,
from ../../../../doc/examples/classes.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
mpicc -DHAVE_CONFIG_H -I. -I../../../../doc/examples -I../.. -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../../../src/init.c' || echo '../../../../doc/examples/'`../../../../src/init.c
../../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../../src/init.c: In function 'gfs_init':
../../../../src/init.c:416:5: warning: 'MPI_Errhandler_set' is deprecated: MPI_Errhandler_set is superseded by MPI_Comm_set_errhandler in MPI-2.0 [-Wdeprecated-declarations]
MPI_Errhandler_set (MPI_COMM_WORLD, MPI_ERRORS_ARE_FATAL);
^
In file included from ../../../../src/utils.h:34:0,
from ../../../../src/boundary.h:24,
from ../../../../src/init.c:49:
/usr/lib/openmpi/include/mpi.h:1339:20: note: declared here
OMPI_DECLSPEC int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler)
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../../../../doc/examples -I../.. -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo '../../../../doc/examples/'`modules.c
In file included from /usr/include/limits.h:25:0,
from /usr/lib/gcc/arm-linux-gnueabihf/5/include-fixed/limits.h:168,
from /usr/lib/gcc/arm-linux-gnueabihf/5/include-fixed/syslimits.h:7,
from /usr/lib/gcc/arm-linux-gnueabihf/5/include-fixed/limits.h:34,
from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11,
from /usr/include/glib-2.0/glib/gtypes.h:32,
from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/glib-2.0/gmodule.h:28,
from ../../../../doc/examples/modules.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
./modules ../../../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list
(./classes && sh ../../../../doc/examples/modulesyms.sh ../../../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic
echo "# Language file for source-highlight" > gfs.lang
echo "# Generated automatically by classes.c" >> gfs.lang
awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang
echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang
echo "comment start \"#\"" >> gfs.lang
echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang
echo "(defvar gfs-abbrevs '(" > gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el
echo "(defvar gfs-modules '(" >> gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el
echo "(provide 'gfs-keywords)" >> gfs-keywords.el
sh ../../../../doc/examples/gfs.php.sh > gfs.php
make all-am
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
make[6]: Nothing to be done for 'all-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
Making all in manpages
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/manpages'
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
mpicc -DHAVE_CONFIG_H -I. -I../../../doc -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo '../../../doc/'`autoclass.c
In file included from /usr/include/string.h:25:0,
from ../../../doc/autoclass.c:1:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../doc/autoclass.c: In function 'main':
../../../doc/autoclass.c:6:21: warning: variable 'klass' set but not used [-Wunused-but-set-variable]
GtsObjectClass ** klass;
^
mpicc -DHAVE_CONFIG_H -I. -I../../../doc -I.. -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../../../src/init.c' || echo '../../../doc/'`../../../src/init.c
../../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
# define _GNU_SOURCE
^
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/fenv.h:25:0,
from ../../../src/init.c:34:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^
../../../src/init.c: In function 'gfs_init':
../../../src/init.c:416:5: warning: 'MPI_Errhandler_set' is deprecated: MPI_Errhandler_set is superseded by MPI_Comm_set_errhandler in MPI-2.0 [-Wdeprecated-declarations]
MPI_Errhandler_set (MPI_COMM_WORLD, MPI_ERRORS_ARE_FATAL);
^
In file included from ../../../src/utils.h:34:0,
from ../../../src/boundary.h:24,
from ../../../src/init.c:49:
/usr/lib/openmpi/include/mpi.h:1339:20: note: declared here
OMPI_DECLSPEC int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler)
^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
Making all in desktop
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/desktop'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/desktop'
Making all in debian
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/debian'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_test -a -O--parallel
fakeroot debian/rules binary-arch
dh binary-arch --parallel --with autoreconf
dh_auto_test -a -O--parallel
dh_testroot -a -O--parallel
dh_prep -a -O--parallel
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_install --builddirectory=debian/build --dest=debian/tmp
make -j1 install DESTDIR=/<<BUILDDIR>>/gerris-20131206\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
Making install in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
make install-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c libgfs2D.la libgfs3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gerris2D gerris3D '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
/usr/bin/install -c -m 644 ../../../src/gfs.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c -m 644 ../../../src/m4.awk '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
/usr/bin/install -c -m 644 ../../../src/ftt.h ../../../src/fluid.h ../../../src/variable.h ../../../src/output.h ../../../src/solid.h ../../../src/poisson.h ../../../src/advection.h ../../../src/boundary.h ../../../src/mpi_boundary.h ../../../src/timestep.h ../../../src/domain.h ../../../src/init.h ../../../src/refine.h ../../../src/event.h ../../../src/simulation.h ../../../src/graphic.h ../../../src/adaptive.h ../../../src/source.h ../../../src/tension.h ../../../src/vof.h ../../../src/utils.h ../../../src/ocean.h ../../../src/wave.h ../../../src/levelset.h ../../../src/isocube.h ../../../src/cartesian.h ../../../src/surface.h ../../../src/unstructured.h ../../../src/map.h ../../../src/river.h ../../../src/moving.h ../../../src/balance.h ../../../src/metric.h ../../../src/particle.h ../../../src/version.h ../../../src/spatial.h ../../../src/function.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/src'
Making install in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
Making install in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/RStarTree'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/RStarTree'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/RStarTree'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/RStarTree'
Making install in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/kdt'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/kdt'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../../libtool --silent --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/kdt'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/kdt'
Making install in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/fes2004'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/fes2004'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/fes2004'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/fes2004'
Making install in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/wavewatch'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/wavewatch'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/wavewatch'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/wavewatch'
Making install in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/culvert'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/culvert'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c rsurface2kdt '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
libtool: warning: relinking 'libterrain2D.la'
libtool: warning: relinking 'libterrain3D.la'
libtool: warning: relinking 'libparticulates2D.la'
libtool: warning: relinking 'libparticulates3D.la'
libtool: warning: relinking 'libokada2D.la'
libtool: warning: relinking 'libokada3D.la'
libtool: warning: relinking 'libdf33D.la'
libtool: warning: relinking 'libelectrohydro2D.la'
libtool: warning: relinking 'libelectrohydro3D.la'
libtool: warning: relinking 'libskewsymmetric2D.la'
libtool: warning: relinking 'libskewsymmetric3D.la'
libtool: warning: relinking 'libtopics2D.la'
libtool: warning: relinking 'libtopics3D.la'
libtool: warning: relinking 'libculvert2D.la'
libtool: warning: relinking 'liblayered2D.la'
libtool: warning: relinking 'libtide2D.la'
libtool: warning: relinking 'libtide3D.la'
libtool: warning: relinking 'libstokes2D.la'
libtool: warning: relinking 'libstokes3D.la'
libtool: warning: relinking 'libbubbles2D.la'
libtool: warning: relinking 'libbubbles3D.la'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/modules'
Making install in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/tools'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/tools'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c ../../../tools/darcs2dist ../../../tools/bat2gts ../../../tools/ppm2mpeg ../../../tools/ppm2theora ../../../tools/ppm2video ../../../tools/gfs2gfs ../../../tools/gfsjoin ../../../tools/gfsplot '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/tools'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/tools'
Making install in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/test'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/test'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/test'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/test'
Making install in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
Making install in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
/bin/bash: tutorial.tex: No such file or directory
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
/bin/bash: tutorial.tex: No such file or directory
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/tutorial'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/tutorial'
Making install in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
make install-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c gfs2doc gfs-highlight ../../../../doc/examples/gfsxref '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c -m 644 ../../../../doc/examples/gfs2tex.py gfs.lang gerris.dic gfs-keywords.el ../../../../doc/examples/gfs-mode.el ../../../../doc/examples/gfs.sty ../../../../doc/examples/gfs.hva ../../../../doc/examples/kaltura.sh gfs.php '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/examples'
Making install in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/manpages'
make[5]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
/usr/bin/install -c -m 644 ../../../../doc/manpages/bat2gts.1 ../../../../doc/manpages/gerris2D.1 ../../../../doc/manpages/gerris3D.1 ../../../../doc/manpages/gfs2gfs.1 ../../../../doc/manpages/gfs2oogl2D.1 ../../../../doc/manpages/gfs2oogl3D.1 ../../../../doc/manpages/gfscompare2D.1 ../../../../doc/manpages/gfscompare3D.1 ../../../../doc/manpages/gfs-config.1 ../../../../doc/manpages/gfs-highlight.1 ../../../../doc/manpages/gfsjoin.1 ../../../../doc/manpages/gfsxref.1 ../../../../doc/manpages/ppm2mpeg.1 ../../../../doc/manpages/ppmcombine.1 ../../../../doc/manpages/rsurfacequery.1 ../../../../doc/manpages/rsurfaceinfo.1 ../../../../doc/manpages/shapes.1 ../../../../doc/manpages/streamanime.1 ../../../../doc/manpages/xyz2rsurface.1 ../../../../doc/manpages/gfsjoin2D.1 ../../../../doc/manpages/gfsjoin3D.1 '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/manpages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/doc'
Making install in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/desktop'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/desktop'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
/usr/bin/install -c -m 644 ../../../desktop/application-gerris.png ../../../desktop/application-gerris-2D.png ../../../desktop/application-gerris-3D.png ../../../desktop/application-gerris-compressed.png '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
/usr/bin/install -c -m 644 ../../../desktop/gerris.xml '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/desktop'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/desktop'
Making install in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/debian'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/debian'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c ../../build_function libtool '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build'
dh_auto_install --builddirectory=debian/build-mpi --dest=debian/tmp-mpi
make -j1 install DESTDIR=/<<BUILDDIR>>/gerris-20131206\+dfsg/debian/tmp-mpi AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
Making install in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
make install-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c libgfs2D.la libgfs3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/lib/arm-linux-gnueabihf'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gerris2D gerris3D '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/include'
/usr/bin/install -c -m 644 ../../../src/gfs.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/include'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/lib/arm-linux-gnueabihf/pkgconfig'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/gerris'
/usr/bin/install -c -m 644 ../../../src/m4.awk '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/gerris'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/include/gerris'
/usr/bin/install -c -m 644 ../../../src/ftt.h ../../../src/fluid.h ../../../src/variable.h ../../../src/output.h ../../../src/solid.h ../../../src/poisson.h ../../../src/advection.h ../../../src/boundary.h ../../../src/mpi_boundary.h ../../../src/timestep.h ../../../src/domain.h ../../../src/init.h ../../../src/refine.h ../../../src/event.h ../../../src/simulation.h ../../../src/graphic.h ../../../src/adaptive.h ../../../src/source.h ../../../src/tension.h ../../../src/vof.h ../../../src/utils.h ../../../src/ocean.h ../../../src/wave.h ../../../src/levelset.h ../../../src/isocube.h ../../../src/cartesian.h ../../../src/surface.h ../../../src/unstructured.h ../../../src/map.h ../../../src/river.h ../../../src/moving.h ../../../src/balance.h ../../../src/metric.h ../../../src/particle.h ../../../src/version.h ../../../src/spatial.h ../../../src/function.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/include/gerris'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/src'
Making install in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
Making install in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/RStarTree'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/RStarTree'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/RStarTree'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/RStarTree'
Making install in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/kdt'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/kdt'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/bin/bash ../../libtool --silent --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/kdt'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/kdt'
Making install in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/fes2004'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/fes2004'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/fes2004'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/fes2004'
Making install in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/wavewatch'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/wavewatch'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/wavewatch'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/wavewatch'
Making install in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/culvert'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/culvert'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c rsurface2kdt '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/lib/arm-linux-gnueabihf/gerris'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/lib/arm-linux-gnueabihf/gerris'
libtool: warning: relinking 'libterrain2D.la'
libtool: warning: relinking 'libterrain3D.la'
libtool: warning: relinking 'libparticulates2D.la'
libtool: warning: relinking 'libparticulates3D.la'
libtool: warning: relinking 'libokada2D.la'
libtool: warning: relinking 'libokada3D.la'
libtool: warning: relinking 'libdf33D.la'
libtool: warning: relinking 'libelectrohydro2D.la'
libtool: warning: relinking 'libelectrohydro3D.la'
libtool: warning: relinking 'libskewsymmetric2D.la'
libtool: warning: relinking 'libskewsymmetric3D.la'
libtool: warning: relinking 'libtopics2D.la'
libtool: warning: relinking 'libtopics3D.la'
libtool: warning: relinking 'libculvert2D.la'
libtool: warning: relinking 'liblayered2D.la'
libtool: warning: relinking 'libtide2D.la'
libtool: warning: relinking 'libtide3D.la'
libtool: warning: relinking 'libstokes2D.la'
libtool: warning: relinking 'libstokes3D.la'
libtool: warning: relinking 'libbubbles2D.la'
libtool: warning: relinking 'libbubbles3D.la'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/modules'
Making install in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/tools'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/tools'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/usr/bin/install -c ../../../tools/darcs2dist ../../../tools/bat2gts ../../../tools/ppm2mpeg ../../../tools/ppm2theora ../../../tools/ppm2video ../../../tools/gfs2gfs ../../../tools/gfsjoin ../../../tools/gfsplot '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/tools'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/tools'
Making install in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/test'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/test'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/test'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/test'
Making install in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
Making install in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
/bin/bash: tutorial.tex: No such file or directory
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
/bin/bash: tutorial.tex: No such file or directory
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/tutorial'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/tutorial'
Making install in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
make install-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/usr/bin/install -c gfs2doc gfs-highlight ../../../../doc/examples/gfsxref '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/bin'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/gerris'
/usr/bin/install -c -m 644 ../../../../doc/examples/gfs2tex.py gfs.lang gerris.dic gfs-keywords.el ../../../../doc/examples/gfs-mode.el ../../../../doc/examples/gfs.sty ../../../../doc/examples/gfs.hva ../../../../doc/examples/kaltura.sh gfs.php '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/gerris'
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/examples'
Making install in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/manpages'
make[5]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/man/man1'
/usr/bin/install -c -m 644 ../../../../doc/manpages/bat2gts.1 ../../../../doc/manpages/gerris2D.1 ../../../../doc/manpages/gerris3D.1 ../../../../doc/manpages/gfs2gfs.1 ../../../../doc/manpages/gfs2oogl2D.1 ../../../../doc/manpages/gfs2oogl3D.1 ../../../../doc/manpages/gfscompare2D.1 ../../../../doc/manpages/gfscompare3D.1 ../../../../doc/manpages/gfs-config.1 ../../../../doc/manpages/gfs-highlight.1 ../../../../doc/manpages/gfsjoin.1 ../../../../doc/manpages/gfsxref.1 ../../../../doc/manpages/ppm2mpeg.1 ../../../../doc/manpages/ppmcombine.1 ../../../../doc/manpages/rsurfacequery.1 ../../../../doc/manpages/rsurfaceinfo.1 ../../../../doc/manpages/shapes.1 ../../../../doc/manpages/streamanime.1 ../../../../doc/manpages/xyz2rsurface.1 ../../../../doc/manpages/gfsjoin2D.1 ../../../../doc/manpages/gfsjoin3D.1 '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/man/man1'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/manpages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/doc'
Making install in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/desktop'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/desktop'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/icons/hicolor/48x48/mimetypes'
/usr/bin/install -c -m 644 ../../../desktop/application-gerris.png ../../../desktop/application-gerris-2D.png ../../../desktop/application-gerris-3D.png ../../../desktop/application-gerris-compressed.png '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/icons/hicolor/48x48/mimetypes'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/mime/packages'
/usr/bin/install -c -m 644 ../../../desktop/gerris.xml '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/mime/packages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/desktop'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/desktop'
Making install in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/debian'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/debian'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/gerris'
/usr/bin/install -c ../../build_function libtool '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp-mpi/usr/share/gerris'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/build-mpi'
find /<<BUILDDIR>>/gerris-20131206+dfsg/debian/ -name "*.la" | xargs rm -f
sed -i -e "s/mpicc/gcc/g" /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris/build_function
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_install -pgerris --exclude=darcs2dist
dh_install -plibgfs-1.3-2
dh_install -plibgfs-dev
dh_install -pgerris-mpi --sourcedir=debian/tmp-mpi --exclude=darcs2dist
dh_install -plibgfs-mpi-1.3-2 --sourcedir=debian/tmp-mpi
dh_install -plibgfs-mpi-dev --sourcedir=debian/tmp-mpi
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installdocs -a -O--parallel
debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installchangelogs ChangeLog
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installman -a -O--parallel
dh_lintian -a -O--parallel
dh_icons -a -O--parallel
dh_perl -a -O--parallel
dh_link -a -O--parallel
dh_strip_nondeterminism -a -O--parallel
dh_compress -a -O--parallel
dh_fixperms -a -O--parallel
debian/rules override_dh_strip
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_strip --dbg-package=libgfs-dbg
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_makeshlibs -a -O--parallel
debian/rules override_dh_shlibdeps
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_shlibdeps -pgerris -Llibgfs-1.3-2
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 were not linked against libgcc_s.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/bin/gfsjoin3D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/bin/gfs2oogl3D debian/gerris/usr/bin/streamanime debian/gerris/usr/bin/shapes debian/gerris/usr/bin/gfscombine3D debian/gerris/usr/bin/gfscombine2D debian/gerris/usr/bin/gerris2D debian/gerris/usr/bin/gfsjoin2D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris/usr/bin/gfs2oogl2D debian/gerris/usr/bin/ppmcombine debian/gerris/usr/bin/gfscompare3D debian/gerris/usr/bin/gfscompare2D debian/gerris/usr/bin/gerris3D were not linked against libgmodule-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/bin/gfsjoin3D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/bin/gfs2oogl3D debian/gerris/usr/bin/streamanime debian/gerris/usr/bin/shapes debian/gerris/usr/bin/gfscombine3D debian/gerris/usr/bin/gfscombine2D debian/gerris/usr/bin/gerris2D debian/gerris/usr/bin/gfsjoin2D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris/usr/bin/gfs2oogl2D debian/gerris/usr/bin/ppmcombine debian/gerris/usr/bin/gfscompare3D debian/gerris/usr/bin/gfscompare2D debian/gerris/usr/bin/gerris3D were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dh_shlibdeps -plibgfs-1.3-2
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libgfs-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0 debian/libgfs-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0 were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dh_shlibdeps -plibgfs-dev
dh_shlibdeps -pgerris-mpi -Llibgfs-mpi-1.3-2
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris-mpi/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris-mpi/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 were not linked against libgcc_s.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris-mpi/usr/bin/ppmcombine debian/gerris-mpi/usr/bin/gerris3D debian/gerris-mpi/usr/bin/streamanime debian/gerris-mpi/usr/bin/gfscompare2D debian/gerris-mpi/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris-mpi/usr/bin/gfscombine2D debian/gerris-mpi/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris-mpi/usr/bin/gfs2oogl3D debian/gerris-mpi/usr/bin/gerris2D debian/gerris-mpi/usr/bin/gfsjoin2D debian/gerris-mpi/usr/bin/shapes debian/gerris-mpi/usr/bin/gfscompare3D debian/gerris-mpi/usr/bin/gfscombine3D debian/gerris-mpi/usr/bin/gfsjoin3D debian/gerris-mpi/usr/bin/gfs2oogl2D were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris-mpi/usr/bin/ppmcombine debian/gerris-mpi/usr/bin/gerris3D debian/gerris-mpi/usr/bin/streamanime debian/gerris-mpi/usr/bin/gfscompare2D debian/gerris-mpi/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris-mpi/usr/bin/gfscombine2D debian/gerris-mpi/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris-mpi/usr/bin/gfs2oogl3D debian/gerris-mpi/usr/bin/gerris2D debian/gerris-mpi/usr/bin/gfsjoin2D debian/gerris-mpi/usr/bin/shapes debian/gerris-mpi/usr/bin/gfscompare3D debian/gerris-mpi/usr/bin/gfscombine3D debian/gerris-mpi/usr/bin/gfsjoin3D debian/gerris-mpi/usr/bin/gfs2oogl2D were not linked against libgmodule-2.0.so.0 (they use none of the library's symbols)
dh_shlibdeps -plibgfs-mpi-1.3-2
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libgfs-mpi-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0 debian/libgfs-mpi-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0 were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dh_shlibdeps -plibgfs-mpi-dev
dh_shlibdeps -plibgfs-dbg
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installdeb -a -O--parallel
dh_gencontrol -a -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: Depends field of package libgfs-dbg: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: Depends field of package libgfs-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: Depends field of package libgfs-mpi-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O--parallel
dh_builddeb -a -O--parallel
dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-7+b2_armhf.deb'.
dpkg-deb: building package 'gerris-mpi' in '../gerris-mpi_20131206+dfsg-7+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2' in '../libgfs-1.3-2_20131206+dfsg-7+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-dbg' in '../libgfs-dbg_20131206+dfsg-7+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-7+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-mpi-1.3-2' in '../libgfs-mpi-1.3-2_20131206+dfsg-7+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-mpi-dev' in '../libgfs-mpi-dev_20131206+dfsg-7+b2_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../gerris_20131206+dfsg-7+b2_armhf.changes
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build gerris-20131206+dfsg
dpkg-buildpackage: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160314-2324
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
gerris_20131206+dfsg-7+b2_armhf.changes:
----------------------------------------
Format: 1.8
Date: Thu, 25 Feb 2016 21:10:50 +0100
Source: gerris (20131206+dfsg-7)
Binary: gerris gerris-mpi libgfs-1.3-2 libgfs-dbg libgfs-dev libgfs-mpi-1.3-2 libgfs-mpi-dev
Binary-Only: yes
Architecture: armhf
Version: 20131206+dfsg-7+b2
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
gerris - Fluid Flow Solver
gerris-mpi - Fluid Flow Solver
libgfs-1.3-2 - Fluid Flow Solver -- shared libraries
libgfs-dbg - Fluid Flow Solver -- libraries with debugging symbols
libgfs-dev - Fluid Flow Solver -- development libraries and headers
libgfs-mpi-1.3-2 - Fluid Flow Solver -- shared libraries
libgfs-mpi-dev - Fluid Flow Solver -- development libraries and headers
Changes:
gerris (20131206+dfsg-7+b2) stretch-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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Checksums-Sha256:
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Files:
b957852941c2b6dbb2e8cd74b6d432f6 280316 science optional gerris-mpi_20131206+dfsg-7+b2_armhf.deb
9fbac80026df564a4c59a447d64d3133 278466 science optional gerris_20131206+dfsg-7+b2_armhf.deb
e8d3a64ddc905999c1af944fee63a4af 460858 devel optional libgfs-1.3-2_20131206+dfsg-7+b2_armhf.deb
5ea44cbae95e505236067ed7c0f3bc89 4264504 debug extra libgfs-dbg_20131206+dfsg-7+b2_armhf.deb
88fe19ccefa900e6a73651be2012422c 102890 libdevel optional libgfs-dev_20131206+dfsg-7+b2_armhf.deb
fca07e9d1abf9fa22c9cd1e3196c3b2d 468640 devel optional libgfs-mpi-1.3-2_20131206+dfsg-7+b2_armhf.deb
7885daafb1f98d615c3a60de00f2c190 102898 libdevel optional libgfs-mpi-dev_20131206+dfsg-7+b2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
gerris-mpi_20131206+dfsg-7+b2_armhf.deb
---------------------------------------
new debian package, version 2.0.
size 280316 bytes: control archive=3143 bytes.
1256 bytes, 31 lines control
4701 bytes, 73 lines md5sums
58 bytes, 2 lines shlibs
60 bytes, 2 lines triggers
Package: gerris-mpi
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 1009
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.0), libgfortran3 (>= 4.6), libgfs-mpi-1.3-2, libglib2.0-0 (>= 2.12.0), libgts-0.7-5 (>= 0.7.6), libopenmpi1.10
Suggests: python
Conflicts: gerris
Replaces: gerris
Section: science
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
A brief summary of its main (current) features:
.
* Solves the time-dependent incompressible variable-density Euler,
Stokes or Navier-Stokes equations
* Adaptive mesh refinement: the resolution is adapted dynamically to
the features of the flow
* Entirely automatic mesh generation in complex geometries
* Second-order in space and time
* Unlimited number of advected/diffused passive tracers
* Flexible specification of additional source terms
* Portable parallel support using the MPI library
* Volume of Fluid advection scheme for interfacial flows
.
This package has MPI support built in.
drwxr-xr-x root/root 0 2016-03-14 23:23 ./
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/
drwxr-xr-x root/root 0 2016-03-14 23:23 ./usr/bin/
-rwxr-xr-x root/root 3218 2016-03-14 23:22 ./usr/bin/bat2gts
-rwxr-xr-x root/root 18384 2016-03-14 23:23 ./usr/bin/gerris2D
-rwxr-xr-x root/root 18384 2016-03-14 23:23 ./usr/bin/gerris3D
-rwxr-xr-x root/root 1967 2016-03-14 23:22 ./usr/bin/gfs-highlight
-rwxr-xr-x root/root 3579 2016-03-14 23:22 ./usr/bin/gfs2doc
-rwxr-xr-x root/root 551 2016-03-14 23:22 ./usr/bin/gfs2gfs
-rwxr-xr-x root/root 26908 2016-03-14 23:23 ./usr/bin/gfs2oogl2D
-rwxr-xr-x root/root 31012 2016-03-14 23:23 ./usr/bin/gfs2oogl3D
-rwxr-xr-x root/root 9844 2016-03-14 23:23 ./usr/bin/gfscombine2D
-rwxr-xr-x root/root 9844 2016-03-14 23:23 ./usr/bin/gfscombine3D
-rwxr-xr-x root/root 18468 2016-03-14 23:23 ./usr/bin/gfscompare2D
-rwxr-xr-x root/root 18344 2016-03-14 23:23 ./usr/bin/gfscompare3D
-rwxr-xr-x root/root 5034 2016-03-14 23:22 ./usr/bin/gfsjoin
-rwxr-xr-x root/root 9856 2016-03-14 23:23 ./usr/bin/gfsjoin2D
-rwxr-xr-x root/root 9856 2016-03-14 23:23 ./usr/bin/gfsjoin3D
-rwxr-xr-x root/root 1264 2016-03-14 23:22 ./usr/bin/gfsplot
-rwxr-xr-x root/root 1732 2016-03-14 23:22 ./usr/bin/gfsxref
-rwxr-xr-x root/root 22184 2016-03-14 23:23 ./usr/bin/kdt2kdt
-rwxr-xr-x root/root 22104 2016-03-14 23:23 ./usr/bin/kdtquery
-rwxr-xr-x root/root 506 2016-03-14 23:22 ./usr/bin/ppm2mpeg
-rwxr-xr-x root/root 505 2016-03-14 23:22 ./usr/bin/ppm2theora
-rwxr-xr-x root/root 468 2016-03-14 23:22 ./usr/bin/ppm2video
-rwxr-xr-x root/root 5672 2016-03-14 23:23 ./usr/bin/ppmcombine
-rwxr-xr-x root/root 63176 2016-03-14 23:23 ./usr/bin/rsurface2kdt
-rwxr-xr-x root/root 18200 2016-03-14 23:23 ./usr/bin/shapes
-rwxr-xr-x root/root 9820 2016-03-14 23:23 ./usr/bin/streamanime
-rwxr-xr-x root/root 22180 2016-03-14 23:23 ./usr/bin/xyz2kdt
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2 -> libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root 30328 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root 26972 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.a
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.so -> libstokes2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2 -> libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root 30328 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root 26972 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.a
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.so -> libstokes3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/gerris/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/gerris/gfs2tex.py -> ../../share/gerris/lib/gfs2tex.py
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/gerris/m4.awk -> ../../share/gerris/lib/m4.awk
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/gerris-mpi/
-rw-r--r-- root/root 930 2013-12-06 15:51 ./usr/share/doc/gerris-mpi/AUTHORS
-rw-r--r-- root/root 4362 2013-12-06 15:51 ./usr/share/doc/gerris-mpi/NEWS.gz
-rw-r--r-- root/root 665 2013-12-06 15:51 ./usr/share/doc/gerris-mpi/README
-rw-r--r-- root/root 277 2013-12-06 15:51 ./usr/share/doc/gerris-mpi/THANKS
-rw-r--r-- root/root 1405 2013-12-06 15:51 ./usr/share/doc/gerris-mpi/TODO
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-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/gerris-mpi/changelog.gz
-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/gerris-mpi/copyright
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/gerris/
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-rw-r--r-- root/root 387 2016-03-14 23:22 ./usr/share/gerris/kaltura.sh
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lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/share/man/man1/ppm2mpeg.1.gz -> gerris2D.1.gz
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-rw-r--r-- root/root 398 2016-03-14 23:22 ./usr/share/man/man1/rsurfaceinfo.1.gz
-rw-r--r-- root/root 332 2016-03-14 23:22 ./usr/share/man/man1/rsurfacequery.1.gz
-rw-r--r-- root/root 660 2016-03-14 23:22 ./usr/share/man/man1/shapes.1.gz
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/share/man/man1/streamanime.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 554 2016-03-14 23:22 ./usr/share/man/man1/xyz2rsurface.1.gz
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/mime/
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-rw-r--r-- root/root 1048 2016-03-14 23:22 ./usr/share/mime/packages/gerris.xml
gerris_20131206+dfsg-7+b2_armhf.deb
-----------------------------------
new debian package, version 2.0.
size 278466 bytes: control archive=3442 bytes.
1312 bytes, 32 lines control
4665 bytes, 73 lines md5sums
471 bytes, 17 lines * preinst #!/bin/sh
50 bytes, 2 lines shlibs
60 bytes, 2 lines triggers
Package: gerris
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 983
Depends: libgfs-dev, libgts-dev, libav-tools, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libgfortran3 (>= 4.6), libgfs-1.3-2, libglib2.0-0 (>= 2.12.0), libgts-0.7-5 (>= 0.7.6)
Recommends: gfsview
Suggests: python
Conflicts: gerris-mpi
Replaces: gerris-mpi
Section: science
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
A brief summary of its main (current) features:
.
* Solves the time-dependent incompressible variable-density Euler,
Stokes or Navier-Stokes equations
* Adaptive mesh refinement: the resolution is adapted dynamically to
the features of the flow
* Entirely automatic mesh generation in complex geometries
* Second-order in space and time
* Unlimited number of advected/diffused passive tracers
* Flexible specification of additional source terms
* Portable parallel support using the MPI library
* Volume of Fluid advection scheme for interfacial flows
.
For multi-cpu MPI support, install gerris-mpi instead.
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drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/bin/
-rwxr-xr-x root/root 3218 2016-03-14 23:21 ./usr/bin/bat2gts
-rwxr-xr-x root/root 14264 2016-03-14 23:22 ./usr/bin/gerris2D
-rwxr-xr-x root/root 14264 2016-03-14 23:22 ./usr/bin/gerris3D
-rwxr-xr-x root/root 1967 2016-03-14 23:21 ./usr/bin/gfs-highlight
-rwxr-xr-x root/root 3579 2016-03-14 23:21 ./usr/bin/gfs2doc
-rwxr-xr-x root/root 551 2016-03-14 23:21 ./usr/bin/gfs2gfs
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-rwxr-xr-x root/root 9844 2016-03-14 23:22 ./usr/bin/gfscombine2D
-rwxr-xr-x root/root 9844 2016-03-14 23:22 ./usr/bin/gfscombine3D
-rwxr-xr-x root/root 18468 2016-03-14 23:22 ./usr/bin/gfscompare2D
-rwxr-xr-x root/root 18344 2016-03-14 23:22 ./usr/bin/gfscompare3D
-rwxr-xr-x root/root 5034 2016-03-14 23:21 ./usr/bin/gfsjoin
-rwxr-xr-x root/root 5688 2016-03-14 23:22 ./usr/bin/gfsjoin2D
-rwxr-xr-x root/root 5688 2016-03-14 23:22 ./usr/bin/gfsjoin3D
-rwxr-xr-x root/root 1264 2016-03-14 23:21 ./usr/bin/gfsplot
-rwxr-xr-x root/root 1732 2016-03-14 23:21 ./usr/bin/gfsxref
-rwxr-xr-x root/root 22184 2016-03-14 23:22 ./usr/bin/kdt2kdt
-rwxr-xr-x root/root 18008 2016-03-14 23:22 ./usr/bin/kdtquery
-rwxr-xr-x root/root 506 2016-03-14 23:21 ./usr/bin/ppm2mpeg
-rwxr-xr-x root/root 505 2016-03-14 23:21 ./usr/bin/ppm2theora
-rwxr-xr-x root/root 468 2016-03-14 23:21 ./usr/bin/ppm2video
-rwxr-xr-x root/root 5672 2016-03-14 23:22 ./usr/bin/ppmcombine
-rwxr-xr-x root/root 63176 2016-03-14 23:22 ./usr/bin/rsurface2kdt
-rwxr-xr-x root/root 14104 2016-03-14 23:22 ./usr/bin/shapes
-rwxr-xr-x root/root 9820 2016-03-14 23:22 ./usr/bin/streamanime
-rwxr-xr-x root/root 22180 2016-03-14 23:22 ./usr/bin/xyz2kdt
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2 -> libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root 30328 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root 26972 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.a
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.so -> libstokes2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2 -> libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root 30328 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root 26972 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.a
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.so -> libstokes3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/gerris/
-rw-r--r-- root/root 930 2013-12-06 15:51 ./usr/share/doc/gerris/AUTHORS
-rw-r--r-- root/root 4362 2013-12-06 15:51 ./usr/share/doc/gerris/NEWS.gz
-rw-r--r-- root/root 665 2013-12-06 15:51 ./usr/share/doc/gerris/README
-rw-r--r-- root/root 277 2013-12-06 15:51 ./usr/share/doc/gerris/THANKS
-rw-r--r-- root/root 1405 2013-12-06 15:51 ./usr/share/doc/gerris/TODO
-rw-r--r-- root/root 227 2016-03-14 22:30 ./usr/share/doc/gerris/changelog.Debian.armhf.gz
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-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/gerris/changelog.gz
-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/gerris/copyright
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/gerris/
-rwxr-xr-x root/root 851 2016-03-14 23:22 ./usr/share/gerris/build_function
-rw-r--r-- root/root 4695 2016-03-14 23:21 ./usr/share/gerris/gerris.dic
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-rw-r--r-- root/root 9281 2016-03-14 23:21 ./usr/share/gerris/gfs.lang
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-rw-r--r-- root/root 7148 2016-03-14 23:21 ./usr/share/gerris/gfs2tex.py
-rw-r--r-- root/root 387 2016-03-14 23:21 ./usr/share/gerris/kaltura.sh
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-rw-r--r-- root/root 934 2016-03-14 23:21 ./usr/share/gerris/m4.awk
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lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/share/man/man1/gerris3D.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 447 2016-03-14 23:22 ./usr/share/man/man1/gfs-config.1.gz
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lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/share/man/man1/gfscompare3D.1.gz -> gfscompare2D.1.gz
-rw-r--r-- root/root 383 2016-03-14 23:22 ./usr/share/man/man1/gfsjoin.1.gz
-rw-r--r-- root/root 433 2016-03-14 23:22 ./usr/share/man/man1/gfsjoin2D.1.gz
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-rw-r--r-- root/root 466 2016-03-14 23:22 ./usr/share/man/man1/gfsxref.1.gz
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/share/man/man1/ppm2mpeg.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 488 2016-03-14 23:22 ./usr/share/man/man1/ppmcombine.1.gz
-rw-r--r-- root/root 398 2016-03-14 23:22 ./usr/share/man/man1/rsurfaceinfo.1.gz
-rw-r--r-- root/root 332 2016-03-14 23:22 ./usr/share/man/man1/rsurfacequery.1.gz
-rw-r--r-- root/root 660 2016-03-14 23:22 ./usr/share/man/man1/shapes.1.gz
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/share/man/man1/streamanime.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 554 2016-03-14 23:22 ./usr/share/man/man1/xyz2rsurface.1.gz
drwxr-xr-x root/root 0 2016-03-14 23:21 ./usr/share/mime/
drwxr-xr-x root/root 0 2016-03-14 23:21 ./usr/share/mime/packages/
-rw-r--r-- root/root 1048 2016-03-14 23:21 ./usr/share/mime/packages/gerris.xml
libgfs-1.3-2_20131206+dfsg-7+b2_armhf.deb
-----------------------------------------
new debian package, version 2.0.
size 460858 bytes: control archive=917 bytes.
667 bytes, 17 lines control
556 bytes, 7 lines md5sums
56 bytes, 2 lines shlibs
60 bytes, 2 lines triggers
Package: libgfs-1.3-2
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 1557
Depends: libc6 (>= 2.4), libglib2.0-0 (>= 2.30.0), libgts-0.7-5 (>= 0.7.6+darcs121130)
Conflicts: libgfs-1.3-1, libgfs-mpi-1.3-2
Replaces: libgfs-1.3-1, libgfs-mpi-1.3-2
Section: devel
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- shared libraries
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the shared libraries for libgfs.
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drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0
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drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/libgfs-1.3-2/
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-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/libgfs-1.3-2/copyright
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/lintian/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 48 2011-04-06 06:12 ./usr/share/lintian/overrides/libgfs-1.3-2
libgfs-dbg_20131206+dfsg-7+b2_armhf.deb
---------------------------------------
new debian package, version 2.0.
size 4264504 bytes: control archive=2812 bytes.
1386 bytes, 16 lines control
4757 bytes, 46 lines md5sums
Package: libgfs-dbg
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 5143
Depends: libgfs-1.3-2 (= 20131206+dfsg-7+b2) | libgfs-mpi-1.3-2 (= 20131206+dfsg-7+b2)
Section: debug
Priority: extra
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- libraries with debugging symbols
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the debugging symbols for libgfs.
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drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/libgfs-dbg/
-rw-r--r-- root/root 227 2016-03-14 22:30 ./usr/share/doc/libgfs-dbg/changelog.Debian.armhf.gz
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-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/libgfs-dbg/changelog.gz
-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/libgfs-dbg/copyright
libgfs-dev_20131206+dfsg-7+b2_armhf.deb
---------------------------------------
new debian package, version 2.0.
size 102890 bytes: control archive=1833 bytes.
659 bytes, 18 lines control
2844 bytes, 44 lines md5sums
Package: libgfs-dev
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 316
Depends: libgfs-1.3-2 (= 20131206+dfsg-7+b2)
Conflicts: libgfs-mpi-dev
Replaces: libgfs-mpi-dev
Section: libdevel
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- development libraries and headers
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the headers and development libraries needed to
build applications using libgfs.
drwxr-xr-x root/root 0 2016-03-14 23:23 ./
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/
drwxr-xr-x root/root 0 2016-03-14 23:21 ./usr/include/
drwxr-xr-x root/root 0 2016-03-14 23:21 ./usr/include/gerris/
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-rw-r--r-- root/root 1649 2016-03-14 23:21 ./usr/include/gerris/init.h
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-rw-r--r-- root/root 1638 2016-03-14 23:21 ./usr/include/gerris/levelset.h
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-rw-r--r-- root/root 5708 2016-03-14 23:21 ./usr/include/gerris/simulation.h
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-rw-r--r-- root/root 4599 2016-03-14 23:21 ./usr/include/gerris/surface.h
-rw-r--r-- root/root 4072 2016-03-14 23:21 ./usr/include/gerris/tension.h
-rw-r--r-- root/root 5180 2016-03-14 23:21 ./usr/include/gerris/timestep.h
-rw-r--r-- root/root 1589 2016-03-14 23:21 ./usr/include/gerris/unstructured.h
-rw-r--r-- root/root 10845 2016-03-14 23:21 ./usr/include/gerris/utils.h
-rw-r--r-- root/root 9866 2016-03-14 23:21 ./usr/include/gerris/variable.h
-rw-r--r-- root/root 195 2016-03-14 23:21 ./usr/include/gerris/version.h
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-rw-r--r-- root/root 1525 2016-03-14 23:21 ./usr/include/gfs.h
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs2D.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs3D.so -> libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
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drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/
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drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/libgfs-dev/
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-rw-r--r-- root/root 3991 2016-03-14 22:30 ./usr/share/doc/libgfs-dev/changelog.Debian.gz
-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/libgfs-dev/changelog.gz
-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/libgfs-dev/copyright
libgfs-mpi-1.3-2_20131206+dfsg-7+b2_armhf.deb
---------------------------------------------
new debian package, version 2.0.
size 468640 bytes: control archive=907 bytes.
694 bytes, 19 lines control
497 bytes, 6 lines md5sums
64 bytes, 2 lines shlibs
60 bytes, 2 lines triggers
Package: libgfs-mpi-1.3-2
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 1590
Depends: libc6 (>= 2.4), libglib2.0-0 (>= 2.30.0), libgts-0.7-5 (>= 0.7.6+darcs121130), libopenmpi1.10
Conflicts: libgfs-1.3-2
Replaces: libgfs-1.3-2
Section: devel
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- shared libraries
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the shared libraries for libgfs.
.
This package has MPI support built in.
drwxr-xr-x root/root 0 2016-03-14 23:23 ./
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0
-rw-r--r-- root/root 749084 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2 -> libgfs3D-1.3.so.2.0.0
-rw-r--r-- root/root 791980 2016-03-14 23:23 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/libgfs-mpi-1.3-2/
-rw-r--r-- root/root 227 2016-03-14 22:30 ./usr/share/doc/libgfs-mpi-1.3-2/changelog.Debian.armhf.gz
-rw-r--r-- root/root 3991 2016-03-14 22:30 ./usr/share/doc/libgfs-mpi-1.3-2/changelog.Debian.gz
-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/libgfs-mpi-1.3-2/changelog.gz
-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/libgfs-mpi-1.3-2/copyright
libgfs-mpi-dev_20131206+dfsg-7+b2_armhf.deb
-------------------------------------------
new debian package, version 2.0.
size 102898 bytes: control archive=1853 bytes.
702 bytes, 20 lines control
2860 bytes, 44 lines md5sums
Package: libgfs-mpi-dev
Source: gerris (20131206+dfsg-7)
Version: 20131206+dfsg-7+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 316
Depends: libgfs-mpi-1.3-2 (= 20131206+dfsg-7+b2)
Conflicts: libgfs-dev
Replaces: libgfs-dev
Section: libdevel
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- development libraries and headers
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the headers and development libraries needed to
build applications using libgfs.
.
This package has MPI support built in.
drwxr-xr-x root/root 0 2016-03-14 23:24 ./
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/
drwxr-xr-x root/root 0 2016-03-14 23:21 ./usr/include/
drwxr-xr-x root/root 0 2016-03-14 23:21 ./usr/include/gerris/
-rw-r--r-- root/root 4867 2016-03-14 23:21 ./usr/include/gerris/adaptive.h
-rw-r--r-- root/root 3762 2016-03-14 23:21 ./usr/include/gerris/advection.h
-rw-r--r-- root/root 1490 2016-03-14 23:21 ./usr/include/gerris/balance.h
-rw-r--r-- root/root 10432 2016-03-14 23:21 ./usr/include/gerris/boundary.h
-rw-r--r-- root/root 2105 2016-03-14 23:21 ./usr/include/gerris/cartesian.h
-rw-r--r-- root/root 18544 2016-03-14 23:21 ./usr/include/gerris/domain.h
-rw-r--r-- root/root 10394 2016-03-14 23:21 ./usr/include/gerris/event.h
-rw-r--r-- root/root 11820 2016-03-14 23:21 ./usr/include/gerris/fluid.h
-rw-r--r-- root/root 23268 2016-03-14 23:21 ./usr/include/gerris/ftt.h
-rw-r--r-- root/root 7232 2016-03-14 23:21 ./usr/include/gerris/function.h
-rw-r--r-- root/root 4699 2016-03-14 23:21 ./usr/include/gerris/graphic.h
-rw-r--r-- root/root 1649 2016-03-14 23:21 ./usr/include/gerris/init.h
-rw-r--r-- root/root 4138 2016-03-14 23:21 ./usr/include/gerris/isocube.h
-rw-r--r-- root/root 1638 2016-03-14 23:21 ./usr/include/gerris/levelset.h
-rw-r--r-- root/root 3198 2016-03-14 23:21 ./usr/include/gerris/map.h
-rw-r--r-- root/root 5078 2016-03-14 23:21 ./usr/include/gerris/metric.h
-rw-r--r-- root/root 2675 2016-03-14 23:21 ./usr/include/gerris/moving.h
-rw-r--r-- root/root 1892 2016-03-14 23:21 ./usr/include/gerris/mpi_boundary.h
-rw-r--r-- root/root 3387 2016-03-14 23:21 ./usr/include/gerris/ocean.h
-rw-r--r-- root/root 10027 2016-03-14 23:21 ./usr/include/gerris/output.h
-rw-r--r-- root/root 1443 2016-03-14 23:21 ./usr/include/gerris/particle.h
-rw-r--r-- root/root 5385 2016-03-14 23:21 ./usr/include/gerris/poisson.h
-rw-r--r-- root/root 3333 2016-03-14 23:21 ./usr/include/gerris/refine.h
-rw-r--r-- root/root 3990 2016-03-14 23:21 ./usr/include/gerris/river.h
-rw-r--r-- root/root 5708 2016-03-14 23:21 ./usr/include/gerris/simulation.h
-rw-r--r-- root/root 3148 2016-03-14 23:21 ./usr/include/gerris/solid.h
-rw-r--r-- root/root 10086 2016-03-14 23:21 ./usr/include/gerris/source.h
-rw-r--r-- root/root 1870 2016-03-14 23:21 ./usr/include/gerris/spatial.h
-rw-r--r-- root/root 4599 2016-03-14 23:21 ./usr/include/gerris/surface.h
-rw-r--r-- root/root 4072 2016-03-14 23:21 ./usr/include/gerris/tension.h
-rw-r--r-- root/root 5180 2016-03-14 23:21 ./usr/include/gerris/timestep.h
-rw-r--r-- root/root 1589 2016-03-14 23:21 ./usr/include/gerris/unstructured.h
-rw-r--r-- root/root 10845 2016-03-14 23:21 ./usr/include/gerris/utils.h
-rw-r--r-- root/root 9866 2016-03-14 23:21 ./usr/include/gerris/variable.h
-rw-r--r-- root/root 195 2016-03-14 23:21 ./usr/include/gerris/version.h
-rw-r--r-- root/root 6340 2016-03-14 23:21 ./usr/include/gerris/vof.h
-rw-r--r-- root/root 2073 2016-03-14 23:21 ./usr/include/gerris/wave.h
-rw-r--r-- root/root 1525 2016-03-14 23:21 ./usr/include/gfs.h
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs2D.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/libgfs3D.so -> libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root 274 2016-03-14 23:21 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris2D.pc
-rw-r--r-- root/root 263 2016-03-14 23:21 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris3D.pc
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-14 23:22 ./usr/share/doc/libgfs-mpi-dev/
-rw-r--r-- root/root 227 2016-03-14 22:30 ./usr/share/doc/libgfs-mpi-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root 3991 2016-03-14 22:30 ./usr/share/doc/libgfs-mpi-dev/changelog.Debian.gz
-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/libgfs-mpi-dev/changelog.gz
-rw-r--r-- root/root 1937 2014-07-31 21:09 ./usr/share/doc/libgfs-mpi-dev/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 161596
Build-Time: 3250
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 543
Job: gerris_20131206+dfsg-7
Machine Architecture: armhf
Package: gerris
Package-Time: 3843
Source-Version: 20131206+dfsg-7
Space: 161596
Status: successful
Version: 20131206+dfsg-7+b2
--------------------------------------------------------------------------------
Finished at 20160314-2324
Build needed 01:04:03, 161596k disc space