gerris →
20131206+dfsg-19+b2 →
armhf → 2020-03-10 12:18:08
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| gerris 20131206+dfsg-19+b2 (armhf) Tue, 10 Mar 2020 11:57:20 +0000 |
+==============================================================================+
Package: gerris
Version: 20131206+dfsg-19+b2
Source Version: 20131206+dfsg-19
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-ab47e55b-e948-4d52-924e-f555797d70de' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.4 MB in 10s (2341 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'gerris' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/gerris.git
Please use:
git clone https://salsa.debian.org/science-team/gerris.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2863 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main gerris 20131206+dfsg-19 (dsc) [2350 B]
Get:2 http://172.17.0.1/private bullseye-staging/main gerris 20131206+dfsg-19 (tar) [2834 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main gerris 20131206+dfsg-19 (diff) [26.9 kB]
Fetched 2863 kB in 1s (2770 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/gerris-Bi15bc/gerris-20131206+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/gerris-Bi15bc' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-nh9xZl/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-nh9xZl/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-nh9xZl/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Packages [431 B]
Fetched 2107 B in 0s (9845 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12215 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3
Filtered Build-Depends: debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3
dpkg-deb: building package 'sbuild-build-depends-gerris-dummy' in '/<<BUILDDIR>>/resolver-nh9xZl/apt_archive/sbuild-build-depends-gerris-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-gerris-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Sources [569 B]
Get:5 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ Packages [652 B]
Fetched 2554 B in 0s (11.9 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install gerris build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cpp-9 debhelper
dh-autoreconf dh-exec dh-strip-nondeterminism dwz file g++-9 gcc-10-base
gcc-9 gcc-9-base gettext gettext-base gfortran gfortran-9 groff-base
hdf5-helpers ibverbs-providers intltool-debian libaec-dev libaec0
libarchive-zip-perl libasan5 libatomic1 libblkid-dev libbrotli1 libbsd0
libcbor0 libcc1-0 libcroco3 libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7
libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7
libevent-pthreads-2.1-7 libexpat1 libffi-dev libfido2-1
libfile-stripnondeterminism-perl libgcc-9-dev libgcc-s1 libgcc1
libgfortran-9-dev libgfortran5 libglib2.0-0 libglib2.0-bin libglib2.0-data
libglib2.0-dev libglib2.0-dev-bin libgomp1 libgsl-dev libgsl23 libgslcblas0
libgssapi-krb5-2 libgts-0.7-5 libgts-bin libgts-dev libhdf5-103
libhdf5-cpp-103 libhdf5-dev libhwloc-dev libhwloc-plugins libhwloc15
libibverbs-dev libibverbs1 libicu63 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
libltdl-dev libltdl7 libmagic-mgc libmagic1 libmount-dev libmpdec2
libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200 libnl-3-dev
libnl-route-3-200 libnl-route-3-dev libopenmpi-dev libopenmpi3 libpciaccess0
libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2
libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpmix2 libpsl5
libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib librtmp1
libselinux1-dev libsepol1-dev libsigsegv2 libssh2-1 libssl1.1
libstdc++-9-dev libstdc++6 libsub-override-perl libsz2 libtinfo5 libtool
libubsan1 libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6
libxext6 libxml2 libxnvctrl0 m4 man-db mime-support mpi-default-dev
ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config
po-debconf python3 python3-distutils python3-lib2to3 python3-minimal
python3.7 python3.7-minimal sensible-utils uuid-dev zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-9-locales dh-make gcc-9-doc gettext-doc libasprintf-dev
libgettextpo-dev gfortran-doc gfortran-9-doc libcoarrays-dev groff
libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev
librtmp-dev libssh2-1-dev libgirepository1.0-dev libglib2.0-doc
libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev libxml2-utils gsl-ref-psdoc
| gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libgts-doc
libhdf5-doc libtool-doc netcdf-bin netcdf-doc openmpi-doc pciutils
libstdc++-9-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain
libpam-ssh monkeysphere ssh-askpass libmail-box-perl python3-doc python3-tk
python3-venv python3.7-venv python3.7-doc binfmt-support
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl shared-mime-info
xdg-user-dirs krb5-locales libcoarrays-openmpi-dev publicsuffix xauth
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gcc-10-base gettext
gettext-base gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers
intltool-debian libaec-dev libaec0 libarchive-zip-perl libblkid-dev
libbrotli1 libbsd0 libcbor0 libcroco3 libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7
libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7
libevent-pthreads-2.1-7 libexpat1 libffi-dev libfido2-1
libfile-stripnondeterminism-perl libgcc-s1 libgfortran-9-dev libgfortran5
libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev
libglib2.0-dev-bin libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2
libgts-0.7-5 libgts-bin libgts-dev libhdf5-103 libhdf5-cpp-103 libhdf5-dev
libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu63
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libltdl-dev libltdl7 libmagic-mgc libmagic1
libmount-dev libmpdec2 libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200
libnl-3-dev libnl-route-3-200 libnl-route-3-dev libopenmpi-dev libopenmpi3
libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpmix2
libpsl5 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib librtmp1
libselinux1-dev libsepol1-dev libsigsegv2 libssh2-1 libssl1.1
libsub-override-perl libsz2 libtinfo5 libtool libuchardet0 libx11-6
libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db
mime-support mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common
openssh-client pkg-config po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3.7 python3.7-minimal
sbuild-build-depends-gerris-dummy sensible-utils uuid-dev zlib1g-dev
The following packages will be upgraded:
cpp-9 g++-9 gcc-9 gcc-9-base libasan5 libatomic1 libcc1-0 libgcc-9-dev
libgcc1 libgomp1 libstdc++-9-dev libstdc++6 libubsan1 zlib1g
14 upgraded, 143 newly installed, 0 to remove and 16 not upgraded.
Need to get 83.1 MB of archives.
After this operation, 207 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-nh9xZl/apt_archive ./ sbuild-build-depends-gerris-dummy 0.invalid.0 [940 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10-20200222-1+rpi1 [196 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10-20200222-1+rpi1 [36.1 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libgcc1 armhf 1:10-20200222-1+rpi1 [36.0 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10-20200222-1+rpi1 [409 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-2 [84.7 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.6-1+b1 [585 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.6-1+b1 [1525 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.5-3 [36.8 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.6-1+b1 [1669 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.6-1+b1 [351 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.5-3 [20.2 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.5-3 [62.1 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10-20200222-1+rpi1 [115 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf g++-9 armhf 9.2.1-30+rpi1 [8220 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf gcc-9 armhf 9.2.1-30+rpi1 [7727 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf cpp-9 armhf 9.2.1-30+rpi1 [7460 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10-20200222-1+rpi1 [31.5 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10-20200222-1+rpi1 [84.0 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10-20200222-1+rpi1 [8128 B]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libasan5 armhf 9.2.1-30+rpi1 [348 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-9-dev armhf 9.2.1-30+rpi1 [1709 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libgcc-9-dev armhf 9.2.1-30+rpi1 [640 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf gcc-9-base armhf 9.2.1-30+rpi1 [196 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libcbor0 armhf 0.5.0+dfsg-2 [19.5 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libfido2-1 armhf 1.3.1-1 [42.2 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf openssh-client armhf 1:8.2p1-4 [781 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.9 [183 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-2 [104 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-2 [14.7 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.5-1 [1140 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-4 [592 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.9 [994 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf dh-exec armhf 0.23.2+b2 [25.7 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10-20200222-1+rpi1 [229 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.2.1-30+rpi1 [278 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.2.1-30+rpi1 [8105 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.4+repack-11 [35.3 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 28.0-1 [47.6 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf ibverbs-providers armhf 28.0-1 [24.2 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf uuid-dev armhf 2.34-0.1 [92.5 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libblkid-dev armhf 2.34-0.1 [212 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.68.0-1 [284 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-gnutls-dev armhf 7.68.0-1 [358 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libevent-2.1-7 armhf 2.1.11-stable-1 [165 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-7 armhf 2.1.11-stable-1 [124 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libevent-extra-2.1-7 armhf 2.1.11-stable-1 [98.7 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.11-stable-1 [54.7 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libevent-openssl-2.1-7 armhf 2.1.11-stable-1 [59.7 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libevent-dev armhf 2.1.11-stable-1 [279 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libffi-dev armhf 3.3-3 [57.9 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-data all 2.62.5-1 [1135 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-bin armhf 2.62.5-1 [125 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.2-2 [78.4 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.2-2 [145 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-dev-bin armhf 2.62.5-1 [163 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libmount-dev armhf 2.34-0.1 [212 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libsepol1-dev armhf 3.0-1 [306 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libselinux1-dev armhf 3.0-1 [158 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-dev armhf 2.62.5-1 [1433 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.5+dfsg-6 [79.0 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libgsl23 armhf 2.5+dfsg-6 [704 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libgsl-dev armhf 2.5+dfsg-6 [893 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libgts-bin armhf 0.7.6+darcs121130-4 [47.8 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libgts-dev armhf 0.7.6+darcs121130-4 [147 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103 armhf 1.10.4+repack-11 [1280 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-11 [126 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.4+repack-11 [2235 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-14 [388 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libhwloc15 armhf 2.1.0+dfsg-4+rpi1 [112 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libltdl-dev armhf 2.4.6-14 [159 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-dev armhf 2.1.0+dfsg-4+rpi1 [173 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-5 [133 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libxnvctrl0 armhf 440.64-1 [25.1 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-3 [35.9 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 2.1.0+dfsg-4+rpi1 [18.7 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-dev armhf 3.4.0-1 [92.4 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-dev armhf 3.4.0-1 [145 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libibverbs-dev armhf 28.0-1 [199 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf15 armhf 1:4.7.3-1 [341 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-dev armhf 1:4.7.3-1 [92.1 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.1.5-1 [377 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 4.0.2-5+rpi1 [1679 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf openmpi-common all 4.0.2-5+rpi1 [168 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf openmpi-bin armhf 4.0.2-5+rpi1 [185 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi-dev armhf 4.0.2-5+rpi1 [905 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-dev armhf 1.13 [5476 B]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libbsd0:armhf.
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Setting up libgcc1 (1:10-20200222-1+rpi1) ...
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Unpacking libstdc++6:armhf (10-20200222-1+rpi1) over (9.2.1-25+rpi1) ...
Setting up libstdc++6:armhf (10-20200222-1+rpi1) ...
Selecting previously unselected package libuchardet0:armhf.
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Preparing to unpack .../libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
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Preparing to unpack .../groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
Selecting previously unselected package libpipeline1:armhf.
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Unpacking zlib1g:armhf (1:1.2.11.dfsg-2) over (1:1.2.11.dfsg-1.2) ...
Setting up zlib1g:armhf (1:1.2.11.dfsg-2) ...
Selecting previously unselected package man-db.
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Unpacking man-db (2.9.1-1) ...
Selecting previously unselected package libssl1.1:armhf.
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Unpacking libssl1.1:armhf (1.1.1d-2) ...
Selecting previously unselected package libpython3.7-minimal:armhf.
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Unpacking libpython3.7-minimal:armhf (3.7.6-1+b1) ...
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Setting up libssl1.1:armhf (1.1.1d-2) ...
Setting up libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up python3.7-minimal (3.7.6-1+b1) ...
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Unpacking python3-minimal (3.7.5-3) ...
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Unpacking mime-support (3.64) ...
Selecting previously unselected package libmpdec2:armhf.
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Unpacking libmpdec2:armhf (2.4.2-3) ...
Selecting previously unselected package libpython3.7-stdlib:armhf.
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Unpacking libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
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Unpacking python3.7 (3.7.6-1+b1) ...
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Unpacking libpython3-stdlib:armhf (3.7.5-3) ...
Setting up python3-minimal (3.7.5-3) ...
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Unpacking python3 (3.7.5-3) ...
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Unpacking libubsan1:armhf (10-20200222-1+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking g++-9 (9.2.1-30+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking gcc-9 (9.2.1-30+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking cpp-9 (9.2.1-30+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking libcc1-0:armhf (10-20200222-1+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking libgomp1:armhf (10-20200222-1+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking libatomic1:armhf (10-20200222-1+rpi1) over (9.2.1-25+rpi1) ...
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Unpacking libasan5:armhf (9.2.1-30+rpi1) over (9.2.1-25+rpi1) ...
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Selecting previously unselected package libfido2-1:armhf.
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Selecting previously unselected package libkeyutils1:armhf.
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Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5support0:armhf.
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Selecting previously unselected package libgssapi-krb5-2:armhf.
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Setting up libx11-data (2:1.6.9-2) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libgsl23:armhf (2.5+dfsg-6) ...
Setting up uuid-dev:armhf (2.34-0.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libevent-core-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libatomic1:armhf (10-20200222-1+rpi1) ...
Setting up libevent-2.1-7:armhf (2.1.11-stable-1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up pkg-config (0.29-6) ...
Setting up libpcre2-posix2:armhf (10.34-7) ...
Setting up libk5crypto3:armhf (1.17-6+b1) ...
Setting up libltdl7:armhf (2.4.6-14) ...
Setting up libgfortran5:armhf (10-20200222-1+rpi1) ...
Setting up libubsan1:armhf (10-20200222-1+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-3) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libnl-3-200:armhf (3.4.0-1) ...
Setting up openmpi-common (4.0.2-5+rpi1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libkrb5-3:armhf (1.17-6+b1) ...
Setting up libmpdec2:armhf (2.4.2-3) ...
Setting up libfido2-1:armhf (1.3.1-1) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.10+dfsg-4) ...
Setting up libcc1-0:armhf (10-20200222-1+rpi1) ...
Setting up libsz2:armhf (1.0.4-1) ...
Setting up gcc-9-base:armhf (9.2.1-30+rpi1) ...
Setting up libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libblkid-dev:armhf (2.34-0.1) ...
Setting up libgts-bin (0.7.6+darcs121130-4) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Setting up libevent-extra-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libxcb1:armhf (1.13.1-5) ...
Setting up libgsl-dev (2.5+dfsg-6) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-14) ...
Setting up libselinux1-dev:armhf (3.0-1) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libaec-dev:armhf (1.0.4-1) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libevent-openssl-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libglib2.0-bin (2.62.5-1) ...
Setting up m4 (1.4.18-4) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up libasan5:armhf (9.2.1-30+rpi1) ...
Setting up libhdf5-103:armhf (1.10.4+repack-11) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libevent-dev (2.1.11-stable-1) ...
Setting up libhwloc15:armhf (2.1.0+dfsg-4+rpi1) ...
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up dwz (0.13-5) ...
Setting up libnl-3-dev:armhf (3.4.0-1) ...
Setting up groff-base (1.22.4-4) ...
Setting up cpp-9 (9.2.1-30+rpi1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libmount-dev:armhf (2.34-0.1) ...
Setting up libpython3-stdlib:armhf (3.7.5-3) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3.7 (3.7.6-1+b1) ...
Setting up libibverbs1:armhf (28.0-1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up ibverbs-providers:armhf (28.0-1) ...
Setting up openssh-client (1:8.2p1-4) ...
Setting up libhdf5-cpp-103:armhf (1.10.4+repack-11) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libcurl3-gnutls:armhf (7.68.0-1) ...
Setting up python3 (3.7.5-3) ...
Setting up libcurl4-gnutls-dev:armhf (7.68.0-1) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxnvctrl0:armhf (440.64-1) ...
Setting up libnetcdf15:armhf (1:4.7.3-1) ...
Setting up libgcc-9-dev:armhf (9.2.1-30+rpi1) ...
Setting up libnl-route-3-dev:armhf (3.4.0-1) ...
Setting up libltdl-dev:armhf (2.4.6-14) ...
Setting up libhdf5-dev (1.10.4+repack-11) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libnetcdf-dev (1:4.7.3-1) ...
Setting up libhwloc-dev:armhf (2.1.0+dfsg-4+rpi1) ...
Setting up python3-lib2to3 (3.8.2-2) ...
Setting up python3-distutils (3.8.2-2) ...
Setting up libglib2.0-dev-bin (2.62.5-1) ...
Setting up gcc-9 (9.2.1-30+rpi1) ...
Setting up libstdc++-9-dev:armhf (9.2.1-30+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up libgfortran-9-dev:armhf (9.2.1-30+rpi1) ...
Setting up libibverbs-dev:armhf (28.0-1) ...
Setting up libhwloc-plugins:armhf (2.1.0+dfsg-4+rpi1) ...
Setting up libglib2.0-dev:armhf (2.62.5-1) ...
Setting up libgts-dev:armhf (0.7.6+darcs121130-4) ...
Setting up g++-9 (9.2.1-30+rpi1) ...
Setting up gfortran-9 (9.2.1-30+rpi1) ...
Setting up libpmix2:armhf (3.1.5-1) ...
Setting up libopenmpi3:armhf (4.0.2-5+rpi1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up openmpi-bin (4.0.2-5+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libopenmpi-dev:armhf (4.0.2-5+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up mpi-default-dev (1.13) ...
Setting up debhelper (12.9) ...
Setting up dh-exec (0.23.2+b2) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-gerris-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-10+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.34-3+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-30+rpi1 gcc-9_9.2.1-30+rpi1 libc6-dev_2.29-10+rpi1 libstdc++-9-dev_9.2.1-30+rpi1 libstdc++6_10-20200222-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4+b1 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-3+rpi1 binutils-arm-linux-gnueabihf_2.34-3+rpi1 binutils-common_2.34-3+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.2.1-30+rpi1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debianutils_4.9.1 dh-autoreconf_19 dh-exec_0.23.2+b2 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.19-2 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.2.1-30+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10-20200222-1+rpi1 gcc-9_9.2.1-30+rpi1 gcc-9-base_9.2.1-30+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.2.1-30+rpi1 gnupg_2.2.19-2 gnupg-l10n_2.2.19-2 gnupg-utils_2.2.19-2 gpg_2.2.19-2 gpg-agent_2.2.19-2 gpg-wks-client_2.2.19-2 gpg-wks-server_2.2.19-2 gpgconf_2.2.19-2 gpgsm_2.2.19-2 gpgv_2.2.19-2 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-1 hdf5-helpers_1.10.4+repack-11 hostname_3.23 ibverbs-providers_28.0-1 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-5 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4+b1 libarchive-zip-perl_1.67-2 libasan5_9.2.1-30+rpi1 libassuan0_2.5.3-7 libatomic1_10-20200222-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.34-3+rpi1 libblkid-dev_2.34-0.1 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-10+rpi1 libc-dev-bin_2.29-10+rpi1 libc6_2.29-10+rpi1 libc6-dev_2.29-10+rpi1 libcap-ng0_0.7.9-2.1 libcap2_1:2.32-1 libcap2-bin_1:2.32-1 libcbor0_0.5.0+dfsg-2 libcc1-0_10-20200222-1+rpi1 libcom-err2_1.45.5-2 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10+b5 libcrypt1_1:4.4.10-10+b5 libctf-nobfd0_2.34-3+rpi1 libctf0_2.34-3+rpi1 libcurl3-gnutls_7.68.0-1 libcurl4-gnutls-dev_7.68.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.9 libdpkg-perl_1.19.7 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libevent-2.1-7_2.1.11-stable-1 libevent-core-2.1-7_2.1.11-stable-1 libevent-dev_2.1.11-stable-1 libevent-extra-2.1-7_2.1.11-stable-1 libevent-openssl-2.1-7_2.1.11-stable-1 libevent-pthreads-2.1-7_2.1.11-stable-1 libexpat1_2.2.9-1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi-dev_3.3-3 libffi7_3.3-3 libfido2-1_1.3.1-1 libfile-stripnondeterminism-perl_1.6.3-2 libgcc-9-dev_9.2.1-30+rpi1 libgcc-s1_10-20200222-1+rpi1 libgcc1_1:10-20200222-1+rpi1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.2.1-30+rpi1 libgfortran5_10-20200222-1+rpi1 libglib2.0-0_2.62.5-1 libglib2.0-bin_2.62.5-1 libglib2.0-data_2.62.5-1 libglib2.0-dev_2.62.5-1 libglib2.0-dev-bin_2.62.5-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200222-1+rpi1 libgpg-error0_1.37-1 libgsl-dev_2.5+dfsg-6 libgsl23_2.5+dfsg-6 libgslcblas0_2.5+dfsg-6 libgssapi-krb5-2_1.17-6+b1 libgts-0.7-5_0.7.6+darcs121130-4 libgts-bin_0.7.6+darcs121130-4 libgts-dev_0.7.6+darcs121130-4 libhdf5-103_1.10.4+repack-11 libhdf5-cpp-103_1.10.4+repack-11 libhdf5-dev_1.10.4+repack-11 libhogweed5_3.5.1+really3.5.1-2 libhwloc-dev_2.1.0+dfsg-4+rpi1 libhwloc-plugins_2.1.0+dfsg-4+rpi1 libhwloc15_2.1.0+dfsg-4+rpi1 libibverbs-dev_28.0-1 libibverbs1_28.0-1 libicu63_63.2-2 libidn2-0_2.2.0-2 libisl22_0.22.1-1 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-6+b1 libkeyutils1_1.6.1-2 libkrb5-3_1.17-6+b1 libkrb5support0_1.17-6+b1 libksba8_1.3.5-2 libldap-2.4-2_2.4.49+dfsg-1+rpi1 libldap-common_2.4.49+dfsg-1+rpi1 libltdl-dev_2.4.6-14 libltdl7_2.4.6-14 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount-dev_2.34-0.1 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncursesw6_6.1+20191019-1 libnetcdf-dev_1:4.7.3-1 libnetcdf15_1:4.7.3-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnl-3-200_3.4.0-1 libnl-3-dev_3.4.0-1 libnl-route-3-200_3.4.0-1 libnl-route-3-dev_3.4.0-1 libnpth0_1.6-1 libopenmpi-dev_4.0.2-5+rpi1 libopenmpi3_4.0.2-5+rpi1 libp11-kit0_0.23.20-1 libpam-cap_1:2.32-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpciaccess0_0.14-1 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpmix2_3.1.5-1 libpsl5_0.21.0-1 libpython3-stdlib_3.7.5-3 libpython3.7-minimal_3.7.6-1+b1 libpython3.7-stdlib_3.7.6-1+b1 libreadline7_7.0-5 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2+rpi1 libselinux1_3.0-1 libselinux1-dev_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsepol1-dev_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.1-3 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-30+rpi1 libstdc++6_10-20200222-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_244.3-1+rpi1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo5_6.2-1 libtinfo6_6.1+20191019-1 libtool_2.4.6-14 libubsan1_10-20200222-1+rpi1 libuchardet0_0.0.6-3 libudev1_244.3-1+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb1_1.13.1-5 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxml2_2.9.10+dfsg-4 libxnvctrl0_440.64-1 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.34-0.1 mpi-default-dev_1.13 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 netbase_6.1 ocl-icd-libopencl1_2.2.12-3 openmpi-bin_4.0.2-5+rpi1 openmpi-common_4.0.2-5+rpi1 openssh-client_1:8.2p1-4 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29-6 po-debconf_1.0.21 python3_3.7.5-3 python3-distutils_3.8.2-2 python3-lib2to3_3.8.2-2 python3-minimal_3.7.5-3 python3.7_3.7.6-1+b1 python3.7-minimal_3.7.6-1+b1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gerris-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6 tzdata_2019c-3 util-linux_2.34-0.1 uuid-dev_2.34-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Feb 10 09:42:31 2020 UTC
gpgv: using RSA key 90E2D2C1AD146A1B7EBB891DBBC17EBB1396F2F7
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./gerris_20131206+dfsg-19.dsc
dpkg-source: info: extracting gerris in /<<BUILDDIR>>/gerris-20131206+dfsg
dpkg-source: info: unpacking gerris_20131206+dfsg.orig.tar.gz
dpkg-source: info: unpacking gerris_20131206+dfsg-19.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 01_automake_doc_examples
dpkg-source: info: applying 02_fix_makefiles.patch
dpkg-source: info: applying 03_build_funct.patch
dpkg-source: info: applying 05_reproducible_build.patch
dpkg-source: info: applying 05_Port-to-Python-3.patch
dpkg-source: info: applying 06_Port-to-MPI-3.0.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 20131206+dfsg-19+b2
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-ab47e55b-e948-4d52-924e-f555797d70de
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package gerris
dpkg-buildpackage: info: source version 20131206+dfsg-19+b2
dpkg-buildpackage: info: source distribution bullseye-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see:
configure.ac:50: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:108: installing './compile'
configure.ac:50: installing './missing'
doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/Makefile.am:12: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/Makefile.am:12: but option 'subdir-objects' is disabled
automake: warning: possible forward-incompatibility.
automake: At least a source file is in a subdirectory, but the 'subdir-objects'
automake: automake option hasn't been enabled. For now, the corresponding output
automake: object file(s) will be placed in the top-level directory. However,
automake: this behaviour will change in future Automake versions: they will
automake: unconditionally cause object files to be placed in the same subdirectory
automake: of the corresponding sources.
automake: You are advised to start using 'subdir-objects' option throughout your
automake: project, to avoid future incompatibilities.
doc/Makefile.am: installing './depcomp'
doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/examples/Makefile.am:123: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/examples/Makefile.am:123: but option 'subdir-objects' is disabled
parallel-tests: installing './test-driver'
modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_configure -- --enable-mpi
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpi
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for mpicc... yes
checking for gcc... mpicc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking whether mpicc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of mpicc... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... dlltool
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gawk... (cached) mawk
checking for library containing strerror... none required
checking for ANSI C header files... (cached) yes
checking whether pointers can be stored in doubles... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GTS... yes
checking whether modules are supported... yes
checking for pkg-config... yes
checking for m4... yes
checking check whether m4 accepts the -P option... yes
checking for pj_fwd in -lproj... no
configure: WARNING: libproj not found. Map module will not be available.
checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
checking for gsl-config... /usr/bin/gsl-config
checking for GSL - version >= 0.2.5... yes
checking for nc_open in -lnetcdf... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for g77... no
checking for xlf... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f77 accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
checking if f77 static flag -static works... yes
checking if f77 supports -c -o file.o... yes
checking if f77 supports -c -o file.o... (cached) yes
checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from f77... -v
checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for ode-config... no
configure: WARNING: ODE not found. ode module will not be available.
checking for HYPRE_IJMatrixCreate in -lHYPRE... no
configure: WARNING: HYPRE not found. hypre Module won't be available.
checking for lis_initialize in -llis... no
configure: WARNING: lis not found. lis Module won't be available.
checking for FFTW3... no
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking for unistd.h... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking for getopt_long... yes
checking for g_mkdtemp... yes
checking for open_memstream... yes
checking for funopen... no
checking for open_memstream... (cached) yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/gerris2D.pc
config.status: creating src/gerris3D.pc
config.status: creating tools/Makefile
config.status: creating modules/Makefile
config.status: creating modules/RStarTree/Makefile
config.status: creating modules/kdt/Makefile
config.status: creating modules/fes2004/Makefile
config.status: creating modules/wavewatch/Makefile
config.status: creating modules/culvert/Makefile
config.status: creating test/Makefile
config.status: creating doc/Makefile
config.status: creating doc/tutorial/Makefile
config.status: creating doc/examples/Makefile
config.status: creating doc/manpages/Makefile
config.status: creating doc/examples/gfs2doc
config.status: creating doc/examples/gfs-highlight
config.status: creating doc/examples/crossref.sh
config.status: creating desktop/Makefile
config.status: creating debian/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration summary
System = arm-unknown-linux-gnueabihf
C Compiler = mpicc
C Flags = -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99
MPI enabled = yes
GModule support = yes
pkg-config = yes
m4 = yes
m4 options = -P
open_memstream = yes
Modules
map = no
tide = yes
stokes = yes
wavewatch = no
hypre = no
lis = no
agmg = no
ode = no
bubbles = yes
fft = no
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_build -a
make -j1
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
Making all in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make all-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo './'`gerris.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from gerris.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo './'`ftt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from ftt.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo './'`fluid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from fluid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function]
126 | static GfsGradient interpolate_1D2 (FttCell * cell,
| ^~~~~~~~~~~~~~~
fluid.c: In function 'face_bilinear':
fluid.c:1151:37: warning: 'd[2]' is used uninitialized in this function [-Wuninitialized]
1151 | d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2];
| ~~~~~~^~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo './'`variable.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from variable.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo './'`output.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from output.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo './'`solid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from solid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
solid.c: In function 'paint_mixed_leaf':
solid.c:794:13: warning: ((const char*) (__func__))
794 | w/k, i, solid->s[i]);
| ^~~~~~~~~~~~~~~~~~
solid.c: In function 'check_area_fractions':
solid.c:1010:13: warning: ((const char*) (__func__))
1010 | bb.x2, bb.y2, bb.z2);
| ^~~~~~~~~~~~
solid.c:1019:13: warning: ((const char*) (__func__))
1019 | bb.x2, bb.y2, bb.z2);
| ^~~~~~~~~~~~
solid.c:1039:13: warning: ((const char*) (__func__))
1039 | oi, nsolid->s[oi]);
| ^~~~~~~~~~~
solid.c:1053:13: warning: ((const char*) (__func__))
1053 | oi, nsolid->s[oi]);
| ^~~~~~~~~~~~~~~~
solid.c:1065:13: warning: ((const char*) (__func__))
1065 | i, solid->s[i]);
| ^~~~~~~~~~~~~
solid.c:1081:13: warning: ((const char*) (__func__))
1081 | i, solid->s[i]);
| ^~~~~~~~
solid.c:1095:13: warning: ((const char*) (__func__))
1095 | i, solid->s[i]);
| ^~~~~~~~~~~~~
solid.c: In function 'check_solid_fractions':
solid.c:1127:13: warning: ((const char*) (__func__))
1127 | n, GFS_STATE (children.c[n])->solid->a);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
solid.c:1145:13: warning: ((const char*) (__func__))
1145 | a, GFS_STATE (cell)->solid->a);
| ^~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo './'`poisson.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from poisson.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo './'`advection.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from advection.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
advection.c: In function 'set_merged':
advection.c:663:13: warning: ((const char*) (__func__))
663 | solid->a);
| ^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo './'`boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo './'`mpi_boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from mpi_boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
mpi_boundary.c: In function 'gfs_boundary_mpi_init':
mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations]
280 | MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag);
| ^~~~~~~~~~~~
In file included from utils.h:34,
from boundary.h:24,
from domain.h:23,
from mpi_boundary.c:24:
/usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2701:20: note: declared here
2701 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
| ^~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo './'`timestep.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from timestep.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo './'`domain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from domain.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo './'`init.c
init.c:33: warning: "_GNU_SOURCE" redefined
33 | # define _GNU_SOURCE
|
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/fenv.h:26,
from init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo './'`refine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from refine.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo './'`event.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from event.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo './'`simulation.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from simulation.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
simulation.c: In function 'error_handler':
simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid);
| ^
In file included from /usr/include/stdio.h:867,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from simulation.h:27,
from simulation.c:27:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo './'`graphic.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from graphic.c:30:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
graphic.c: In function 'grow_curve':
graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable]
1986 | FttVector p1;
| ^~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo './'`adaptive.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from adaptive.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo './'`source.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from source.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo './'`tension.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from tension.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo './'`vof.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from vof.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
vof.c: In function 'gfs_height_curvature':
vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable]
2619 | gdouble area = gfs_vof_center (cell, t, &fc);
| ^~~~
vof.c: In function 'gfs_height_curvature_new':
vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable]
2871 | gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc);
| ^~~~
At top level:
vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
| ^~~~~~~~~~
vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
| ^~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo './'`utils.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from utils.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
utils.c: In function 'get_tmp_file':
utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
57 | GTimeVal tv;
| ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
551 | struct _GTimeVal
| ^~~~~~~~~
utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
72 | g_get_current_time (&tv);
| ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
from /usr/include/glib-2.0/glib.h:54,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
575 | void g_get_current_time (GTimeVal *result);
| ^~~~~~~~~~~~~~~~~~
utils.c: In function 'current_time':
utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
653 | GTimeVal r;
| ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
551 | struct _GTimeVal
| ^~~~~~~~~
utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
654 | g_get_current_time (&r);
| ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
from /usr/include/glib-2.0/glib.h:54,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
575 | void g_get_current_time (GTimeVal *result);
| ^~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo './'`ocean.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from ocean.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
ocean.c: In function 'correct_normal_velocity':
ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
45 | FttFaceType type;
| ^~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo './'`wave.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from wave.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo './'`levelset.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from levelset.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo './'`cartesian.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from cartesian.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo './'`surface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from simulation.h:27,
from surface.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo './'`unstructured.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from unstructured.h:24,
from unstructured.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo './'`map.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from advection.h:27,
from timestep.h:27,
from variable.h:29,
from map.h:27,
from map.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
map.c: In function 'gfs_map_read':
map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
34 | gboolean class_changed = FALSE;
| ^~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo './'`river.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from river.c:55:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo './'`moving.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from moving.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
In file included from moving.c:49:
moving2.c: In function 'second_order_face_fractions':
moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
257 | gdouble dt1, dt2, dto1, dto2, s1, s2;
| ^~
moving2.c: In function 'old_solid_fractions_from_children':
moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
731 | for (i = 0; i < FTT_CELLS; i++)
| ^~~
moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
735 | gfs_cell_init_solid_fractions_from_children (cell);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo './'`balance.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from event.h:27,
from balance.h:27,
from balance.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo './'`metric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from metric.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
241 | static double kpu_2d_l4[17][3] = {
| ^~~~~~~~~
metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
221 | static double kpu_2d_l2[5][3] = {
| ^~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo './'`particle.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from particle.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o gerris.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from gerris.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ftt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from ftt.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo fluid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from fluid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
fluid.c: In function 'gfs_cell_coarse_fine':
fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable]
1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
| ^~~
fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable]
1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
| ^~~
fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable]
1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
| ^~~
fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable]
1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
| ^~~
fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable]
1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
| ^~~
fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable]
1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
| ^~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo variable.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from variable.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo output.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from output.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo solid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from solid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
solid.c: In function 'set_solid_fractions_from_surface':
solid.c:561:21: warning: comparison between 'FttComponent' {aka 'enum <anonymous>'} and 'enum <anonymous>' [-Wenum-compare]
561 | for (c = 1; c < FTT_NEIGHBORS; c++)
| ^
solid.c: In function 'paint_mixed_leaf':
solid.c:794:13: warning: ((const char*) (__func__))
794 | w/k, i, solid->s[i]);
| ^~~~~~~~~~~~~~~~~~
solid.c: In function 'check_area_fractions':
solid.c:1010:13: warning: ((const char*) (__func__))
1010 | bb.x2, bb.y2, bb.z2);
| ^~~~~~~~~~~~
solid.c:1019:13: warning: ((const char*) (__func__))
1019 | bb.x2, bb.y2, bb.z2);
| ^~~~~~~~~~~~
solid.c:1039:13: warning: ((const char*) (__func__))
1039 | oi, nsolid->s[oi]);
| ^~~~~~~~~~~
solid.c:1053:13: warning: ((const char*) (__func__))
1053 | oi, nsolid->s[oi]);
| ^~~~~~~~~~~~~~~~
solid.c:1065:13: warning: ((const char*) (__func__))
1065 | i, solid->s[i]);
| ^~~~~~~~~~~~~
solid.c:1081:13: warning: ((const char*) (__func__))
1081 | i, solid->s[i]);
| ^~~~~~~~
solid.c:1095:13: warning: ((const char*) (__func__))
1095 | i, solid->s[i]);
| ^~~~~~~~~~~~~
solid.c: In function 'check_solid_fractions':
solid.c:1127:13: warning: ((const char*) (__func__))
1127 | n, GFS_STATE (children.c[n])->solid->a);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
solid.c:1145:13: warning: ((const char*) (__func__))
1145 | a, GFS_STATE (cell)->solid->a);
| ^~~~~~~~~~~~~~~~~~~~~~
In file included from solid.c:338:
At top level:
isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable]
95 | static FttDirection corner[8][3] = {
| ^~~~~~
isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
66 | static FttVector cvertex[8] = {
| ^~~~~~~
isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
52 | static guint connectv[12][2][4] = {
| ^~~~~~~~
isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable]
47 | static FttVector edge[12][2] = {
| ^~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo poisson.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from poisson.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo advection.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from advection.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
advection.c: In function 'set_merged':
advection.c:663:13: warning: ((const char*) (__func__))
663 | solid->a);
| ^
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo mpi_boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from mpi_boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
mpi_boundary.c: In function 'gfs_boundary_mpi_init':
mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations]
280 | MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag);
| ^~~~~~~~~~~~
In file included from utils.h:34,
from boundary.h:24,
from domain.h:23,
from mpi_boundary.c:24:
/usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2701:20: note: declared here
2701 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
| ^~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo timestep.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from timestep.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo domain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from domain.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo init.c
init.c:33: warning: "_GNU_SOURCE" redefined
33 | # define _GNU_SOURCE
|
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/fenv.h:26,
from init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo refine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from refine.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo event.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from event.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo simulation.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from simulation.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
simulation.c: In function 'error_handler':
simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid);
| ^
In file included from /usr/include/stdio.h:867,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from simulation.h:27,
from simulation.c:27:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo graphic.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from graphic.c:30:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
In file included from graphic.c:42:
isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
66 | static FttVector cvertex[8] = {
| ^~~~~~~
isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
52 | static guint connectv[12][2][4] = {
| ^~~~~~~~
isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable]
39 | static guint face_v[6][4] = {
| ^~~~~~
isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable]
31 | static guint face[6][4][2] = {
| ^~~~
isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable]
27 | static FttVector vertex[8] = {
| ^~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo adaptive.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from adaptive.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo source.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from source.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo tension.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from tension.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo vof.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from vof.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function]
2682 | static void curvature_from_h (FttCell * cell, GfsDomain * domain,
| ^~~~~~~~~~~~~~~~
vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function]
2646 | static gdouble neighboring_column (FttCell * cell,
| ^~~~~~~~~~~~~~~~~~
vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
| ^~~~~~~~~~
vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
| ^~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo utils.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from utils.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
utils.c: In function 'get_tmp_file':
utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
57 | GTimeVal tv;
| ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
551 | struct _GTimeVal
| ^~~~~~~~~
utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
72 | g_get_current_time (&tv);
| ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
from /usr/include/glib-2.0/glib.h:54,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
575 | void g_get_current_time (GTimeVal *result);
| ^~~~~~~~~~~~~~~~~~
utils.c: In function 'current_time':
utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
653 | GTimeVal r;
| ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
551 | struct _GTimeVal
| ^~~~~~~~~
utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
654 | g_get_current_time (&r);
| ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
from /usr/include/glib-2.0/glib.h:54,
from /usr/include/gts.h:24,
from solid.h:23,
from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
575 | void g_get_current_time (GTimeVal *result);
| ^~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ocean.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from ocean.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
ocean.c: In function 'correct_normal_velocity':
ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
45 | FttFaceType type;
| ^~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo wave.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from wave.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo levelset.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from levelset.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo cartesian.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from cartesian.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo surface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from simulation.h:27,
from surface.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo unstructured.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from unstructured.h:24,
from unstructured.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo map.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from fluid.h:23,
from boundary.h:23,
from domain.h:23,
from advection.h:27,
from timestep.h:27,
from variable.h:29,
from map.h:27,
from map.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
map.c: In function 'gfs_map_read':
map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
34 | gboolean class_changed = FALSE;
| ^~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo river.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from river.c:55:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo moving.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from moving.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
In file included from moving.c:49:
moving2.c: In function 'second_order_face_fractions':
moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
257 | gdouble dt1, dt2, dto1, dto2, s1, s2;
| ^~
moving2.c: In function 'old_solid_fractions_from_children':
moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
731 | for (i = 0; i < FTT_CELLS; i++)
| ^~~
moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
735 | gfs_cell_init_solid_fractions_from_children (cell);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo balance.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from event.h:27,
from balance.h:27,
from balance.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo metric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from metric.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
241 | static double kpu_2d_l4[17][3] = {
| ^~~~~~~~~
metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
221 | static double kpu_2d_l2[5][3] = {
| ^~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo particle.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from particle.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
Making all in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making all in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo './'`RStarTree.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from RStarTree.c:3:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
RStarTree.c: In function 'BasicCheck':
RStarTree.c:824:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
824 | fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte));
| ~~^ ~~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:831:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
831 | fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int));
| ~~^ ~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:838:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
838 | fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo));
| ~~^ ~~~~~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:839:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
839 | fprintf(stderr,"%s %ld\n"," sizeof(int):",sizeof(int));
| ~~^ ~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:846:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
846 | fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir));
| ~~^ ~~~~~~~~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:847:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
847 | fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock));
| ~~^ ~~~~~~~~~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:854:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
854 | fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters));
| ~~^ ~~~~~~~~~~~~~~~~~~~~~
| | |
| long int unsigned int
| %d
RStarTree.c:855:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
855 | fprintf(stderr,"%s %ld\n"," sizeof(typfixblock):",sizeof(typfixblock));
| ~~^ ~~~~~~~~~~~~~~~~~~~
| | |
| long int unsigned int
| %d
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo './'`RSTInstDel.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
from RStarTree.h:28,
from RSTInstDel.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
RSTInstDel.c: In function 'SplitAndDistributData':
RSTInstDel.c:748:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
748 | axisindex;
| ^~~~~~~~~
RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
971 | if (axis != (*par).maxdim || axsortside != currsortside) {
| ^
RSTInstDel.c:744:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
744 | Side sortside, currsortside, axsortside;
| ^~~~~~~~~~
RSTInstDel.c:952:8: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
952 | if (backvalvalue <= validvalue) {
| ^
RSTInstDel.c:952:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c:956:14: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
956 | validedge= validedge+backvaledge;
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
RSTInstDel.c:956:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c: In function 'SplitAndDistributDir':
RSTInstDel.c:482:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
482 | axisindex;
| ^~~~~~~~~
RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
705 | if (axis != (*par).maxdim || axsortside != currsortside) {
| ^
RSTInstDel.c:478:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
478 | Side sortside, currsortside, axsortside;
| ^~~~~~~~~~
RSTInstDel.c:686:8: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
686 | if (backvalvalue <= validvalue) {
| ^
RSTInstDel.c:686:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c:690:14: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
690 | validedge= validedge+backvaledge;
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
RSTInstDel.c:690:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo './'`RSTJoin.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
from RStarTree.h:28,
from RSTJoin.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo './'`RSTUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
from RStarTree.h:28,
from RSTUtil.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
RSTUtil.c: In function 'Covers':
RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable]
204 | int maxdim;
| ^~~~~~
RSTUtil.c: In function 'ChooseSubtree':
RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable]
546 | int maxexam, inv;
| ^~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo './'`RSTInOut.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
from RStarTree.h:28,
from RSTInOut.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo './'`RSTInterUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
from RStarTree.h:28,
from RSTInterUtil.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
RSTInterUtil.c: In function 'SetCheckDir':
RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable]
208 | PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries;
| ^~~~~~~~~~~~~~~~~~~~~~~~
RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable]
207 | PACKEDdirentrylen, REALdirentrylen,
| ^~~~~~~~~~~~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo './'`RSTQuery.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
from RStarTree.h:28,
from RSTQuery.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libcSmRST.la libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
Making all in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo './'`xyz2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from xyz2kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo './'`kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function]
450 | static void kdt_rect_write (const KdtRect rect, FILE * fp)
| ^~~~~~~~~~~~~~
kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function]
252 | static void kdt_write (KdtHeap * h, FILE * fp)
| ^~~~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libkdt.la libkdt_la-kdt.lo
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm
mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo './'`kdt2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from kdt2kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm
mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo './'`kdtquery.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from kdtquery.c:21:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o kdtquery kdtquery-kdtquery.o -lkdt -lm
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
Making all in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo './'`fes2004_alloc.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from fes2004_lib.h:12,
from fes2004_alloc.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo './'`fes2004_error.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from fes2004_error.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
fes2004_error.c:4:6: warning: no previous prototype for 'print_error_1' [-Wmissing-prototypes]
4 | void print_error_1()
| ^~~~~~~~~~~~~
fes2004_error.c:11:6: warning: no previous prototype for 'print_error_2' [-Wmissing-prototypes]
11 | void print_error_2()
| ^~~~~~~~~~~~~
fes2004_error.c:18:6: warning: no previous prototype for 'print_error_3' [-Wmissing-prototypes]
18 | void print_error_3(char *message)
| ^~~~~~~~~~~~~
fes2004_error.c:25:6: warning: no previous prototype for 'print_error_4' [-Wmissing-prototypes]
25 | void print_error_4(char *message)
| ^~~~~~~~~~~~~
fes2004_error.c:32:6: warning: no previous prototype for 'print_error_5' [-Wmissing-prototypes]
32 | void print_error_5(char *message)
| ^~~~~~~~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo './'`fes2004_extraction.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from fes2004_lib.h:12,
from fes2004_extraction.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo './'`fes2004_init.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from fes2004_lib.h:12,
from fes2004_init.c:2:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
fes2004_init.c: In function 'init_spectrum':
fes2004_init.c:42:7: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
42 | int rstatus;
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo './'`fes2004_io.c
In file included from /usr/include/errno.h:25,
from /usr/include/netcdf.h:17,
from fes2004_io.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
fes2004_io.c: In function 'load_netcdf_fes2004_data':
fes2004_io.c:16:9: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
16 | int i,rstatus;
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo './'`fes2004_prediction.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from fes2004_lib.h:12,
from fes2004_prediction.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo './'`fes2004_kernel.c
In file included from /usr/include/errno.h:25,
from /usr/include/netcdf.h:17,
from fes2004_kernel.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
fes2004_kernel.c: In function 'pred_coeur':
fes2004_kernel.c:115:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
115 | double pi;
| ^~
fes2004_kernel.c: In function 'extract_coeur':
fes2004_kernel.c:191:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
191 | double pi;
| ^~
fes2004_kernel.c: In function 'compute_admittance':
fes2004_kernel.c:457:11: warning: variable 'gsl_out' set but not used [-Wunused-but-set-variable]
457 | int i,n,gsl_out;
| ^~~~~~~
fes2004_kernel.c: In function 'astronomic_angle':
fes2004_kernel.c:663:16: warning: variable 'sin2I' set but not used [-Wunused-but-set-variable]
663 | double t2,t4,sin2I,s2;
| ^~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libfes.la libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
Making all in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
Making all in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo './'`check_inlet.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from check_inlet.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo './'`boyd87.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from boyd87.c:9:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libboyd87.la libboyd87_la-boyd87.lo
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm
mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo './'`check_outlet.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from check_outlet.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm
mpicc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo './'`discharge_table.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from discharge_table.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo './'`rsurface2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from rsurface2kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo './'`rsurface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from rsurface.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
In file included from rsurface.c:5:
rsurface.h:16:1: warning: no semicolon at end of struct or union
16 | } RSurfaceSum;
| ^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm
libtool: warning: '-version-info' is ignored for programs
libtool: warning: '-release' is ignored for programs
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from particulatecommon.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon2D.la libparticulatecommon2D_la-particulatecommon.lo
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from particulatecommon.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon3D.la libparticulatecommon3D_la-particulatecommon.lo
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo './'`terrain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from terrain.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo terrain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from terrain.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from ../src/particle.h:27,
from particulatecommon.h:20,
from particulates.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from ../src/particle.h:27,
from particulatecommon.h:20,
from particulates.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from okada.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from okada.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo './'`df3.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from df3.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/fluid.h:23,
from ../src/boundary.h:23,
from ../src/domain.h:23,
from ../src/simulation.h:27,
from electrohydro.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/fluid.h:23,
from ../src/boundary.h:23,
from ../src/domain.h:23,
from ../src/simulation.h:27,
from electrohydro.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/fluid.h:23,
from ../src/boundary.h:23,
from ../src/domain.h:23,
from ../src/simulation.h:27,
from skewsymmetric.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
skewsymmetric.c: In function 'gfs_skew_symmetric_run':
skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION];
| ^~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/fluid.h:23,
from ../src/boundary.h:23,
from ../src/domain.h:23,
from ../src/simulation.h:27,
from skewsymmetric.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
skewsymmetric.c: In function 'gfs_skew_symmetric_run':
skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION];
| ^~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/solid.h:23,
from topics.c:21:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
In file included from ../src/timestep.h:29,
from ../src/simulation.h:28,
from ../src/event.h:53,
from ../src/solid.h:26,
from topics.c:21:
topics.c: In function 'print_interface':
topics.c:1139:38: warning: array subscript 2 is above array bounds of 'GfsVariable *[2]' {aka 'struct _GfsVariable *[2]'} [-Warray-bounds]
1139 | double nz = GFS_VALUE(cell, tv->m[2]);
../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE'
76 | #define GFS_VALUE(cell,v) ((&GFS_STATE (cell)->place_holder)[(v)->i])
| ^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/solid.h:23,
from topics.c:21:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo './'`culvert.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from ../src/source.h:27,
from ../src/river.h:27,
from culvert.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lculvert -lboyd87 -lm
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo './'`layered.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/fluid.h:23,
from ../src/boundary.h:23,
from ../src/domain.h:23,
from ../src/simulation.h:27,
from layered.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from tide.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from tide.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from stokes.c:19:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=F77 --mode=compile f77 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -c -o CW263.lo CW263.f
CW263.f:45:72:
45 | 31 write(*,'(f9.3,8f8.3,1x,a)') xx,yy,uu,vv,ut,vt,du,dv,etah,ans
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 31 at (1)
CW263.f:61:72:
61 | 32 write(*,'(f9.3,8f8.3,1x,1a)') xx,yy,uu,vv,ut,vt,du,dv,etah
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1)
CW263.f:73:72:
73 | 33 write(*,'(f9.3,8f8.3)') xx,etah,uu,vv,ut,vt,du,dv,etah
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 33 at (1)
CW263.f:126:72:
126 | 10 amp(i)= 0.0
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:155:72:
155 | 14 amp(i)= (h/hm)*amp(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:209:72:
209 | do 10 j=1,nfun-1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:210:72:
210 | 10 x(i)= x(i)+cos(j*th)*amp(j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:217:72:
217 | 11 etas(i)= eta(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1)
CW263.f:219:72:
219 | 12 etas(nfun+i)= eta(nfun-i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:253:72:
253 | 40 eta(i)= x(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
CW263.f:257:72:
257 | 10 sm= sm+eta(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:272:72:
272 | do 18 j=1,nfun-2
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 18 at (1)
CW263.f:296:72:
296 | do 23 n=1,nfun
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 23 at (1)
CW263.f:304:72:
304 | 23 shcs(i,n)= sh*cs
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 23 at (1)
CW263.f:311:72:
311 | do 12 j=2,nfun
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 12 at (1)
CW263.f:314:72:
314 | 12 df(i,j)= chcs(i,n)*n*k
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:320:72:
320 | do 41 j=1,nfun-2
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 41 at (1)
CW263.f:323:72:
323 | 42 dij= dij+da(i,n)*dex(n,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1)
CW263.f:324:72:
324 | 41 dax(i,j)= dij
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 41 at (1)
CW263.f:331:72:
331 | 13 sm= sm+da(i,m)*s(m)/k
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1)
CW263.f:332:72:
332 | 19 dax(i,nfun-1)= sm
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 19 at (1)
CW263.f:340:72:
340 | do 24 j=1,nfun-1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 24 at (1)
CW263.f:345:72:
345 | 24 dcx(i,j)= r*dax(i,j)+a(i)*drx
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1)
CW263.f:354:72:
354 | 15 sv= sv+n*k*c(n+1)*shsn(i,n)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 15 at (1)
CW263.f:356:72:
356 | 14 vs(i)= sv
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:360:72:
360 | 16 sm= sm+f(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:365:72:
365 | 17 sq= sq+f(i)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 17 at (1)
CW263.f:376:72:
376 | 22 sv= sv+n*k*dcx(n+1,j)*shsn(i,n)+(n*k)**2*c(n+1)*chsn(i,n)*dex(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1)
CW263.f:378:72:
378 | 21 dvx(i,j)= sv
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1)
CW263.f:386:72:
386 | : n**2*k*s(i)*c(n+1)*chsn(i,n)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 25 at (1)
CW263.f:388:72:
388 | 20 dvx(i,j)= sv
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
CW263.f:393:72:
393 | do 44 j=1,nfun-1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 44 at (1)
CW263.f:394:72:
394 | 44 dfx(i,j)= (us(i)*dux(i,j)+vs(i)*dvx(i,j))/g+dex(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1)
CW263.f:399:72:
399 | 46 sm= sm+dfx(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 46 at (1)
CW263.f:401:72:
401 | do 45 i=1,nfun
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 45 at (1)
CW263.f:402:72:
402 | 45 jac(i,j)= dfx(i,j)-sm
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 45 at (1)
CW263.f:419:72:
419 | do 10 j=1,n
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:420:72:
420 | 10 c(i,j)= 0.0d0
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:424:72:
424 | 54 st= st+f(i,1)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 54 at (1)
CW263.f:428:72:
428 | 16 g(i,1)= f(i,1)/st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:435:72:
435 | 20 st= st+g(i,j)*f(i,k)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
CW263.f:436:72:
436 | 29 c(j,k)= st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 29 at (1)
CW263.f:441:72:
441 | 22 st= st+c(j,k)*g(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1)
CW263.f:442:72:
442 | 21 g(i,k)= f(i,k)-st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1)
CW263.f:445:72:
445 | 50 st= st+g(i,k)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
CW263.f:448:72:
448 | 52 g(i,k)= g(i,k)/st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 52 at (1)
CW263.f:453:72:
453 | 202 st= st+g(i,j)*g(i,k)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 202 at (1)
CW263.f:454:72:
454 | 200 db(j)= st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
CW263.f:458:72:
458 | 206 st= st+db(j)*g(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 206 at (1)
CW263.f:459:72:
459 | 204 g(i,k)=g(i,k)-st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 204 at (1)
CW263.f:464:72:
464 | 26 st= st+g(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 26 at (1)
CW263.f:465:72:
465 | 24 b(j)= st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1)
CW263.f:470:72:
470 | 210 sb= sb+b(j)*g(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
CW263.f:471:72:
471 | 208 st= st+(sb-1.0d0)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 208 at (1)
CW263.f:476:72:
476 | 30 st= st+cr(i,j)*b(j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
CW263.f:477:72:
477 | 28 a(i)= st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 28 at (1)
CW263.f:482:72:
482 | 74 sb= sb+a(j)*f(i,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 74 at (1)
CW263.f:483:72:
483 | 72 st= st+(sb-1.0d0)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 72 at (1)
CW263.f:487:72:
487 | do 81 j=1,n
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 81 at (1)
CW263.f:488:72:
488 | 81 dc(i,j)= 0.0d0
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 81 at (1)
CW263.f:493:72:
493 | : -0.5d0*dly(1)*c(1,j)/c(1,1)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 82 at (1)
CW263.f:498:72:
498 | 86 st= st+c(m,l)*dc(m,l)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 86 at (1)
CW263.f:506:72:
506 | 90 st= st+c(j,m)*dc(j,l)+dc(j,m)*c(j,l)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
CW263.f:508:72:
508 | : -st/c(l,l)-0.5d0*dly(l)*c(l,m)/c(l,l)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 85 at (1)
CW263.f:511:72:
511 | do 92 m=1,n
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 92 at (1)
CW263.f:514:72:
514 | 96 st= st+g(l,j)*dc(j,m)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 96 at (1)
CW263.f:515:72:
515 | 92 br(l,m)= -st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 92 at (1)
CW263.f:517:72:
517 | 94 br(k,m)= br(k,m)+df(k,m)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 94 at (1)
CW263.f:523:72:
523 | 36 st= st+br(i,l)*cr(l,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 36 at (1)
CW263.f:524:72:
524 | 34 sb= sb+st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 34 at (1)
CW263.f:525:72:
525 | 32 db(j)= sb
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1)
CW263.f:529:72:
529 | 40 st= st-dc(i,j)*a(j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
CW263.f:530:72:
530 | 38 dly(i)= st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 38 at (1)
CW263.f:534:72:
534 | 44 st= st+cr(i,j)*dly(j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1)
CW263.f:535:72:
535 | 42 da(i,k)= st
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1)
CW263.f:550:72:
550 | do 10 j=1,n
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:551:72:
551 | 10 w(i,j)= 0.0d0
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:562:72:
562 | 14 sum= sum+c(i,m)*w(m,j)/c(m,m)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:563:72:
563 | 13 w(i,j)= -sum
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1)
CW263.f:567:72:
567 | do 16 j=1,n
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 16 at (1)
CW263.f:568:72:
568 | 16 w(i,j)= w(i,j)/sum
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:632:72:
632 | 4 a(k,j)= a(k,j)/c
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 4 at (1)
CW263.f:637:72:
637 | 5 a(i,j)= a(i,j)-c*a(k,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1)
CW263.f:638:72:
638 | 10 b(i)= b(i)-c*b(k)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:648:72:
648 | do 200 j=k1,n
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1)
CW263.f:649:72:
649 | 200 b(k)= b(k)-a(k,j)*b(j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
CW263.f:651:72:
651 | 300 cc(i)= b(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
CW263.f:676:72:
676 | 16 xcm(i)= xc(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:687:72:
687 | 18 xc(i)= xcm(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 18 at (1)
CW263.f:694:72:
694 | do 10 j=1,nv
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:697:72:
697 | 11 ra= ra+fjacc(l,i)*fjacc(l,j)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1)
CW263.f:698:72:
698 | 10 aa(i,j)= ra
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:703:72:
703 | 13 ra= ra+fvecc(l)*fjacc(l,i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1)
CW263.f:704:72:
704 | 12 bb(i)= -ra
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:711:72:
711 | 14 xc(i)= xc(i)+orf*cc(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:745:72:
745 | 10 sm=sm+f(i)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:822:72:
822 | 12 um= t*ul-u0+f(m)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:824:72:
824 | 10 b(k)= s*vl*um*rn
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:856:72:
856 | 11 etah= etah+cos(i*theta)*amp(i)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1)
CW263.f:873:72:
873 | 10 s4= s4+i*i*sh*cs*c(ip)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
/bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from stokes.c:19:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from ../src/particle.h:27,
from particulatecommon.h:20,
from bubbles.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
bubbles.c: In function 'bubble_fraction_init':
bubbles.c:421:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
421 | GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
| ^
bubbles.c: In function 'bubble_fraction_dt_init':
bubbles.c:474:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
474 | GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
| ^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
/bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /usr/include/gts.h:23,
from ../src/event.h:27,
from ../src/particle.h:27,
from particulatecommon.h:20,
from bubbles.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
bubbles.c: In function 'bubble_fraction_init':
bubbles.c:421:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
421 | GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
| ^
bubbles.c: In function 'bubble_fraction_dt_init':
bubbles.c:474:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
474 | GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
| ^
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making all in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo './'`gfs2oogl.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from gfs2oogl.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
gfs2oogl.c: In function 'main':
gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
891 | streamname = g_strdup (g_basename (optarg));
| ^~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:48,
from /usr/include/gts.h:24,
from ../src/init.h:23,
from gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:163:14: note: declared here
163 | const gchar *g_basename (const gchar *file_name);
| ^~~~~~~~~~
gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable]
706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
| ^~~~~
gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable]
706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
| ^~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o gfs2oogl.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from gfs2oogl.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
gfs2oogl.c: In function 'main':
gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
891 | streamname = g_strdup (g_basename (optarg));
| ^~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:48,
from /usr/include/gts.h:24,
from ../src/init.h:23,
from gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:163:14: note: declared here
163 | const gchar *g_basename (const gchar *file_name);
| ^~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o streamanime.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from streamanime.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo './'`ppmcombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from ppmcombine.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
ppmcombine.c: In function 'main':
ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable]
36 | gboolean verbose = FALSE;
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo './'`gfscompare.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from gfscompare.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
gfscompare.c: In function 'main':
gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
319 | gboolean no_check = FALSE;
| ^~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o gfscompare.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from gfscompare.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
gfscompare.c: In function 'main':
gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
319 | gboolean no_check = FALSE;
| ^~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo './'`gfscombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from gfscombine.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o gfscombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from gfscombine.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo './'`gfsjoin2.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from gfsjoin2.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o gfsjoin2.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from gfsjoin2.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o shapes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from shapes.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function]
288 | static void surface_add_rectangular_channel_shape (GtsSurface * s,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o shapes shapes.o -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
Making all in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
Making all in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps
Making all in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
Making all in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo './'`classes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from classes.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../src/init.c' || echo './'`../../src/init.c
../../src/init.c:33: warning: "_GNU_SOURCE" redefined
33 | # define _GNU_SOURCE
|
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/fenv.h:26,
from ../../src/init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo './'`modules.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/limits.h:26,
from /usr/lib/gcc/arm-linux-gnueabihf/9/include-fixed/limits.h:194,
from /usr/lib/gcc/arm-linux-gnueabihf/9/include-fixed/syslimits.h:7,
from /usr/lib/gcc/arm-linux-gnueabihf/9/include-fixed/limits.h:34,
from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11,
from /usr/include/glib-2.0/glib/gtypes.h:32,
from /usr/include/glib-2.0/glib/galloca.h:32,
from /usr/include/glib-2.0/glib.h:30,
from /usr/include/glib-2.0/gmodule.h:28,
from modules.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
./modules ../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list
(./classes && sh ./modulesyms.sh ../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic
echo "# Language file for source-highlight" > gfs.lang
echo "# Generated automatically by classes.c" >> gfs.lang
awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang
echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang
echo "comment start \"#\"" >> gfs.lang
echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang
echo "(defvar gfs-abbrevs '(" > gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el
echo "(defvar gfs-modules '(" >> gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el
echo "(provide 'gfs-keywords)" >> gfs-keywords.el
sh ./gfs.php.sh > gfs.php
make all-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[5]: Nothing to be done for 'all-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
Making all in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo './'`autoclass.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from autoclass.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
autoclass.c: In function 'main':
autoclass.c:6:21: warning: variable 'klass' set but not used [-Wunused-but-set-variable]
6 | GtsObjectClass ** klass;
| ^~~~~
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../src/init.c' || echo './'`../src/init.c
../src/init.c:33: warning: "_GNU_SOURCE" redefined
33 | # define _GNU_SOURCE
|
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/fenv.h:26,
from ../src/init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making all in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
Making all in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_install
make -j1 install DESTDIR=/<<BUILDDIR>>/gerris-20131206\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
Making install in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make install-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c libgfs2D.la libgfs3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gerris2D gerris3D '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
/usr/bin/install -c -m 644 gfs.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c -m 644 m4.awk '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
/usr/bin/install -c -m 644 ftt.h fluid.h variable.h output.h solid.h poisson.h advection.h boundary.h mpi_boundary.h timestep.h domain.h init.h refine.h event.h simulation.h graphic.h adaptive.h source.h tension.h vof.h utils.h ocean.h wave.h levelset.h isocube.h cartesian.h surface.h unstructured.h map.h river.h moving.h balance.h metric.h particle.h version.h spatial.h function.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
Making install in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making install in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
Making install in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../../libtool --silent --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
Making install in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
Making install in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
Making install in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c rsurface2kdt '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
libtool: warning: relinking 'libterrain2D.la'
libtool: warning: relinking 'libterrain3D.la'
libtool: warning: relinking 'libparticulates2D.la'
libtool: warning: relinking 'libparticulates3D.la'
libtool: warning: relinking 'libokada2D.la'
libtool: warning: relinking 'libokada3D.la'
libtool: warning: relinking 'libdf33D.la'
libtool: warning: relinking 'libelectrohydro2D.la'
libtool: warning: relinking 'libelectrohydro3D.la'
libtool: warning: relinking 'libskewsymmetric2D.la'
libtool: warning: relinking 'libskewsymmetric3D.la'
libtool: warning: relinking 'libtopics2D.la'
libtool: warning: relinking 'libtopics3D.la'
libtool: warning: relinking 'libculvert2D.la'
libtool: warning: relinking 'liblayered2D.la'
libtool: warning: relinking 'libtide2D.la'
libtool: warning: relinking 'libtide3D.la'
libtool: warning: relinking 'libstokes2D.la'
libtool: warning: relinking 'libstokes3D.la'
libtool: warning: relinking 'libbubbles2D.la'
libtool: warning: relinking 'libbubbles3D.la'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making install in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
Making install in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
Making install in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making install in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
Making install in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make install-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c gfs2doc gfs-highlight gfsxref '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
Making install in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[5]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
/usr/bin/install -c -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making install in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
/usr/bin/install -c -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
/usr/bin/install -c -m 644 gerris.xml '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
Making install in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c build_function libtool '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
find /<<BUILDDIR>>/gerris-20131206+dfsg/debian/ -name "*.la" | xargs rm -f
sed -i -e "s/mpicc/gcc/g" /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris/build_function
rm -rf /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin/darcs2dist
rm -rf /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin/gfs2doc
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_install -a
dh_installdocs -a
debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installchangelogs ChangeLog
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installman -a
dh_lintian -a
dh_icons -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.a exists in debian/tmp but is not installed to anywhere
The following debhelper tools have reported what they installed (with files per package)
* dh_install: gerris (10), libgfs-1.3-2 (4), libgfs-dev (5)
* dh_installdocs: gerris (5), libgfs-1.3-2 (0), libgfs-dev (0)
* dh_installman: gerris (0), libgfs-1.3-2 (0), libgfs-dev (0)
If the missing files are installed by another tool, please file a bug against it.
When filing the report, if the tool is not part of debhelper itself, please reference the
"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
(in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
For a short-term work-around: Add the files to debian/not-installed
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libgfs-dev: substitution variable ${shlibs:Depends} used, but is not defined
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-19+b2_armhf.deb'.
dpkg-deb: building package 'gerris-dbgsym' in '../gerris-dbgsym_20131206+dfsg-19+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2' in '../libgfs-1.3-2_20131206+dfsg-19+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2-dbgsym' in '../libgfs-1.3-2-dbgsym_20131206+dfsg-19+b2_armhf.deb'.
dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-19+b2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../gerris_20131206+dfsg-19+b2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-03-10T12:18:03Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
gerris_20131206+dfsg-19+b2_armhf.changes:
-----------------------------------------
Format: 1.8
Date: Mon, 10 Feb 2020 20:37:14 +1100
Source: gerris (20131206+dfsg-19)
Binary: gerris gerris-dbgsym libgfs-1.3-2 libgfs-1.3-2-dbgsym libgfs-dev
Binary-Only: yes
Architecture: armhf
Version: 20131206+dfsg-19+b2
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
gerris - Fluid Flow Solver
libgfs-1.3-2 - Fluid Flow Solver -- shared libraries
libgfs-dev - Fluid Flow Solver -- development libraries and headers
Changes:
gerris (20131206+dfsg-19+b2) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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49a02766a3b697ef2d35a2210a827f85e65d1de8 9780 gerris_20131206+dfsg-19+b2_armhf.buildinfo
e24cd21ba56a54cb0cefe479728545603dab591c 281260 gerris_20131206+dfsg-19+b2_armhf.deb
dcbbd1bfd6f8e7b9bbcfade9c20bf416e70fcb55 1866328 libgfs-1.3-2-dbgsym_20131206+dfsg-19+b2_armhf.deb
fe42b334f7b9c4e070d6df76ee72c53558670ab3 476620 libgfs-1.3-2_20131206+dfsg-19+b2_armhf.deb
3ef938fe701d6c6a9052de8b94b5e83a0d0b4ad8 103980 libgfs-dev_20131206+dfsg-19+b2_armhf.deb
Checksums-Sha256:
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9ceadf09621aeefe587d31824d479a8527728e71cf037a29d44899195055ee37 9780 gerris_20131206+dfsg-19+b2_armhf.buildinfo
706655795c42cc4b08470f7b4154d639fe0a2b7f9d2266239ca0504c3827e1f5 281260 gerris_20131206+dfsg-19+b2_armhf.deb
32e06c5da9081c4f2bd6a25cdc189a0f834af72e9f72a34f4801beed7f4850a7 1866328 libgfs-1.3-2-dbgsym_20131206+dfsg-19+b2_armhf.deb
36ca5417c21019701a11013f28d69f6643773f508ae350e2592b2b9a200187b3 476620 libgfs-1.3-2_20131206+dfsg-19+b2_armhf.deb
4aca12c15c03f4bb98b2d509123646b729fb207d8de256a5ee2a0a810f132ae8 103980 libgfs-dev_20131206+dfsg-19+b2_armhf.deb
Files:
174a753f8b63b869202b15852f04e2ed 317248 debug optional gerris-dbgsym_20131206+dfsg-19+b2_armhf.deb
c1db49bc8b1620df3e7ad5eca22713ae 9780 science optional gerris_20131206+dfsg-19+b2_armhf.buildinfo
e4e9a506b87cb69a5ab8237941bade84 281260 science optional gerris_20131206+dfsg-19+b2_armhf.deb
56765a7d7865a1b751d6ffa67432c4d5 1866328 debug optional libgfs-1.3-2-dbgsym_20131206+dfsg-19+b2_armhf.deb
63493ad77ae4a2a053f1de85a4cf8722 476620 devel optional libgfs-1.3-2_20131206+dfsg-19+b2_armhf.deb
9e2b707dea0452c975464c300f81beee 103980 libdevel optional libgfs-dev_20131206+dfsg-19+b2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
gerris-dbgsym_20131206+dfsg-19+b2_armhf.deb
-------------------------------------------
new Debian package, version 2.0.
size 317248 bytes: control archive=1472 bytes.
1154 bytes, 12 lines control
2100 bytes, 20 lines md5sums
Package: gerris-dbgsym
Source: gerris (20131206+dfsg-19)
Version: 20131206+dfsg-19+b2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 493
Depends: gerris (= 20131206+dfsg-19+b2)
Section: debug
Priority: optional
Description: debug symbols for gerris
Build-Ids: 1ecf70744152fe6f2157f704678ee9819e8e688f 230181e23755f80466a19114db5e98ec0266ffa5 2dd2f11a8c97fc80c61751ff3da4789fc00730d0 358c14466aac8f343da13297087d816b96558ff8 3ec00f6c327049e008f4c02908c062410f4c0c01 47316234340a1f3ca7214a73dde4f44cee149d30 5710c5aa1e79408e5e9166489f673abc39905508 5776b1c5a1c1ba49eddb6226a0e55c4d3cc15368 6902a40dc73d3301f38dc2a34ba78ce742579101 6c629ad9cb0f637d32187cf49e782a570ff7f54e 91cdd87d7885a998a9668793598bd8d98a5aaf8c 924ff1f06588fdf629b3e8a653e1786b1734d51b 97aebd2e42308234b8b25311e4898248efacb09a b3e53798faec2cddaec43c5627975ca0dd46bcb2 b5a5a0afd9de37e9d41be0463cfd5885b78cee50 e2a8ad369ac4252ce6bec02e6d7eeda5746428f4 e3d120f0916b8bbf5614766021dfd7b0a8e17d36 f1ae36c15779913b187ed1403b8d0d80702e2033 f7bac4a0b6d99a10166c98a21e2061e7428d585e
drwxr-xr-x root/root 0 2020-02-10 09:37 ./
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/1e/
-rw-r--r-- root/root 8740 2020-02-10 09:37 ./usr/lib/debug/.build-id/1e/cf70744152fe6f2157f704678ee9819e8e688f.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/23/
-rw-r--r-- root/root 25812 2020-02-10 09:37 ./usr/lib/debug/.build-id/23/0181e23755f80466a19114db5e98ec0266ffa5.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/2d/
-rw-r--r-- root/root 11236 2020-02-10 09:37 ./usr/lib/debug/.build-id/2d/d2f11a8c97fc80c61751ff3da4789fc00730d0.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/35/
-rw-r--r-- root/root 19876 2020-02-10 09:37 ./usr/lib/debug/.build-id/35/8c14466aac8f343da13297087d816b96558ff8.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/3e/
-rw-r--r-- root/root 10664 2020-02-10 09:37 ./usr/lib/debug/.build-id/3e/c00f6c327049e008f4c02908c062410f4c0c01.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/47/
-rw-r--r-- root/root 25840 2020-02-10 09:37 ./usr/lib/debug/.build-id/47/316234340a1f3ca7214a73dde4f44cee149d30.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/57/
-rw-r--r-- root/root 29728 2020-02-10 09:37 ./usr/lib/debug/.build-id/57/10c5aa1e79408e5e9166489f673abc39905508.debug
-rw-r--r-- root/root 27788 2020-02-10 09:37 ./usr/lib/debug/.build-id/57/76b1c5a1c1ba49eddb6226a0e55c4d3cc15368.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/69/
-rw-r--r-- root/root 82996 2020-02-10 09:37 ./usr/lib/debug/.build-id/69/02a40dc73d3301f38dc2a34ba78ce742579101.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/6c/
-rw-r--r-- root/root 30220 2020-02-10 09:37 ./usr/lib/debug/.build-id/6c/629ad9cb0f637d32187cf49e782a570ff7f54e.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/91/
-rw-r--r-- root/root 16696 2020-02-10 09:37 ./usr/lib/debug/.build-id/91/cdd87d7885a998a9668793598bd8d98a5aaf8c.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/92/
-rw-r--r-- root/root 10552 2020-02-10 09:37 ./usr/lib/debug/.build-id/92/4ff1f06588fdf629b3e8a653e1786b1734d51b.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/97/
-rw-r--r-- root/root 20944 2020-02-10 09:37 ./usr/lib/debug/.build-id/97/aebd2e42308234b8b25311e4898248efacb09a.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/b3/
-rw-r--r-- root/root 19344 2020-02-10 09:37 ./usr/lib/debug/.build-id/b3/e53798faec2cddaec43c5627975ca0dd46bcb2.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/b5/
-rw-r--r-- root/root 31920 2020-02-10 09:37 ./usr/lib/debug/.build-id/b5/a5a0afd9de37e9d41be0463cfd5885b78cee50.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/e2/
-rw-r--r-- root/root 19864 2020-02-10 09:37 ./usr/lib/debug/.build-id/e2/a8ad369ac4252ce6bec02e6d7eeda5746428f4.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/e3/
-rw-r--r-- root/root 11236 2020-02-10 09:37 ./usr/lib/debug/.build-id/e3/d120f0916b8bbf5614766021dfd7b0a8e17d36.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/f1/
-rw-r--r-- root/root 7060 2020-02-10 09:37 ./usr/lib/debug/.build-id/f1/ae36c15779913b187ed1403b8d0d80702e2033.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/f7/
-rw-r--r-- root/root 31580 2020-02-10 09:37 ./usr/lib/debug/.build-id/f7/bac4a0b6d99a10166c98a21e2061e7428d585e.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 22316 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/gerris.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/doc/gerris-dbgsym -> gerris
gerris_20131206+dfsg-19+b2_armhf.deb
------------------------------------
new Debian package, version 2.0.
size 281260 bytes: control archive=3032 bytes.
1329 bytes, 32 lines control
4615 bytes, 72 lines md5sums
88 bytes, 2 lines shlibs
65 bytes, 2 lines triggers
Package: gerris
Source: gerris (20131206+dfsg-19)
Version: 20131206+dfsg-19+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 1012
Depends: gcc, libc6 (>= 2.29), libgfortran5 (>= 8), libgfs-1.3-2 (>= 20131206+dfsg), libglib2.0-0 (>= 2.12.0), libgts-0.7-5 (>= 0.7.6), libopenmpi3 (>= 4.0.2)
Recommends: gfsview
Suggests: python3
Breaks: gerris-mpi (<< 20131206+dfsg-7)
Replaces: gerris-mpi (<< 20131206+dfsg-7)
Section: science
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
A brief summary of its main (current) features:
.
* Solves the time-dependent incompressible variable-density Euler,
Stokes or Navier-Stokes equations
* Adaptive mesh refinement: the resolution is adapted dynamically to
the features of the flow
* Entirely automatic mesh generation in complex geometries
* Second-order in space and time
* Unlimited number of advected/diffused passive tracers
* Flexible specification of additional source terms
* Portable parallel support using the MPI library
* Volume of Fluid advection scheme for interfacial flows
.
This package has MPI support built in.
drwxr-xr-x root/root 0 2020-02-10 09:37 ./
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/bin/
-rwxr-xr-x root/root 3218 2020-02-10 09:37 ./usr/bin/bat2gts
-rwxr-xr-x root/root 18248 2020-02-10 09:37 ./usr/bin/gerris2D
-rwxr-xr-x root/root 18248 2020-02-10 09:37 ./usr/bin/gerris3D
-rwxr-xr-x root/root 1967 2020-02-10 09:37 ./usr/bin/gfs-highlight
-rwxr-xr-x root/root 551 2020-02-10 09:37 ./usr/bin/gfs2gfs
-rwxr-xr-x root/root 30744 2020-02-10 09:37 ./usr/bin/gfs2oogl2D
-rwxr-xr-x root/root 30744 2020-02-10 09:37 ./usr/bin/gfs2oogl3D
-rwxr-xr-x root/root 9864 2020-02-10 09:37 ./usr/bin/gfscombine2D
-rwxr-xr-x root/root 9864 2020-02-10 09:37 ./usr/bin/gfscombine3D
-rwxr-xr-x root/root 18344 2020-02-10 09:37 ./usr/bin/gfscompare2D
-rwxr-xr-x root/root 18312 2020-02-10 09:37 ./usr/bin/gfscompare3D
-rwxr-xr-x root/root 5034 2020-02-10 09:37 ./usr/bin/gfsjoin
-rwxr-xr-x root/root 9880 2020-02-10 09:37 ./usr/bin/gfsjoin2D
-rwxr-xr-x root/root 9880 2020-02-10 09:37 ./usr/bin/gfsjoin3D
-rwxr-xr-x root/root 1264 2020-02-10 09:37 ./usr/bin/gfsplot
-rwxr-xr-x root/root 1732 2020-02-10 09:37 ./usr/bin/gfsxref
-rwxr-xr-x root/root 22168 2020-02-10 09:37 ./usr/bin/kdt2kdt
-rwxr-xr-x root/root 18008 2020-02-10 09:37 ./usr/bin/kdtquery
-rwxr-xr-x root/root 506 2020-02-10 09:37 ./usr/bin/ppm2mpeg
-rwxr-xr-x root/root 505 2020-02-10 09:37 ./usr/bin/ppm2theora
-rwxr-xr-x root/root 468 2020-02-10 09:37 ./usr/bin/ppm2video
-rwxr-xr-x root/root 5768 2020-02-10 09:37 ./usr/bin/ppmcombine
-rwxr-xr-x root/root 63128 2020-02-10 09:37 ./usr/bin/rsurface2kdt
-rwxr-xr-x root/root 18136 2020-02-10 09:37 ./usr/bin/shapes
-rwxr-xr-x root/root 9864 2020-02-10 09:37 ./usr/bin/streamanime
-rwxr-xr-x root/root 22168 2020-02-10 09:37 ./usr/bin/xyz2kdt
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2 -> libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root 30148 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root 27108 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.a
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.so -> libstokes2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2 -> libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root 30148 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root 27108 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.a
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.so -> libstokes3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/gerris/
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/gerris/gfs2tex.py -> ../../share/gerris/gfs2tex.py
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/gerris/m4.awk -> ../../share/gerris/m4.awk
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/doc/gerris/
-rw-r--r-- root/root 930 2013-12-06 15:51 ./usr/share/doc/gerris/AUTHORS
-rw-r--r-- root/root 4362 2013-12-06 15:51 ./usr/share/doc/gerris/NEWS.gz
-rw-r--r-- root/root 665 2013-12-06 15:51 ./usr/share/doc/gerris/README
-rw-r--r-- root/root 277 2013-12-06 15:51 ./usr/share/doc/gerris/THANKS
-rw-r--r-- root/root 1405 2013-12-06 15:51 ./usr/share/doc/gerris/TODO
-rw-r--r-- root/root 227 2020-02-10 09:37 ./usr/share/doc/gerris/changelog.Debian.armhf.gz
-rw-r--r-- root/root 4782 2020-02-10 09:37 ./usr/share/doc/gerris/changelog.Debian.gz
-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/gerris/changelog.gz
-rw-r--r-- root/root 1933 2020-02-10 09:37 ./usr/share/doc/gerris/copyright
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/gerris/
-rwxr-xr-x root/root 851 2020-02-10 09:37 ./usr/share/gerris/build_function
-rw-r--r-- root/root 5521 2020-02-10 09:37 ./usr/share/gerris/gerris.dic
-rw-r--r-- root/root 6565 2020-02-10 09:37 ./usr/share/gerris/gfs-keywords.el
-rw-r--r-- root/root 4732 2020-02-10 09:37 ./usr/share/gerris/gfs-mode.el
-rw-r--r-- root/root 545 2020-02-10 09:37 ./usr/share/gerris/gfs.hva
-rw-r--r-- root/root 10891 2020-02-10 09:37 ./usr/share/gerris/gfs.lang
-rw-r--r-- root/root 10685 2020-02-10 09:37 ./usr/share/gerris/gfs.php
-rw-r--r-- root/root 210 2020-02-10 09:37 ./usr/share/gerris/gfs.sty
-rw-r--r-- root/root 7152 2020-02-10 09:37 ./usr/share/gerris/gfs2tex.py
-rw-r--r-- root/root 387 2020-02-10 09:37 ./usr/share/gerris/kaltura.sh
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-rw-r--r-- root/root 934 2020-02-10 09:37 ./usr/share/gerris/m4.awk
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/icons/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/icons/hicolor/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/
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-rw-r--r-- root/root 3466 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris.png
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/man/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/man/man1/
-rw-r--r-- root/root 665 2020-02-10 09:37 ./usr/share/man/man1/bat2gts.1.gz
-rw-r--r-- root/root 747 2020-02-10 09:37 ./usr/share/man/man1/gerris2D.1.gz
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/man/man1/gerris3D.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 447 2020-02-10 09:37 ./usr/share/man/man1/gfs-config.1.gz
-rw-r--r-- root/root 499 2020-02-10 09:37 ./usr/share/man/man1/gfs-highlight.1.gz
-rw-r--r-- root/root 446 2020-02-10 09:37 ./usr/share/man/man1/gfs2gfs.1.gz
-rw-r--r-- root/root 1174 2020-02-10 09:37 ./usr/share/man/man1/gfs2oogl2D.1.gz
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/man/man1/gfs2oogl3D.1.gz -> gfs2oogl2D.1.gz
-rw-r--r-- root/root 1008 2020-02-10 09:37 ./usr/share/man/man1/gfscompare2D.1.gz
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/man/man1/gfscompare3D.1.gz -> gfscompare2D.1.gz
-rw-r--r-- root/root 383 2020-02-10 09:37 ./usr/share/man/man1/gfsjoin.1.gz
-rw-r--r-- root/root 433 2020-02-10 09:37 ./usr/share/man/man1/gfsjoin2D.1.gz
-rw-r--r-- root/root 433 2020-02-10 09:37 ./usr/share/man/man1/gfsjoin3D.1.gz
-rw-r--r-- root/root 466 2020-02-10 09:37 ./usr/share/man/man1/gfsxref.1.gz
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/man/man1/ppm2mpeg.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 488 2020-02-10 09:37 ./usr/share/man/man1/ppmcombine.1.gz
-rw-r--r-- root/root 398 2020-02-10 09:37 ./usr/share/man/man1/rsurfaceinfo.1.gz
-rw-r--r-- root/root 332 2020-02-10 09:37 ./usr/share/man/man1/rsurfacequery.1.gz
-rw-r--r-- root/root 660 2020-02-10 09:37 ./usr/share/man/man1/shapes.1.gz
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/man/man1/streamanime.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root 554 2020-02-10 09:37 ./usr/share/man/man1/xyz2rsurface.1.gz
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drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/mime/packages/
-rw-r--r-- root/root 1048 2020-02-10 09:37 ./usr/share/mime/packages/gerris.xml
libgfs-1.3-2-dbgsym_20131206+dfsg-19+b2_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 1866328 bytes: control archive=660 bytes.
476 bytes, 12 lines control
304 bytes, 3 lines md5sums
Package: libgfs-1.3-2-dbgsym
Source: gerris (20131206+dfsg-19)
Version: 20131206+dfsg-19+b2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 2116
Depends: libgfs-1.3-2 (= 20131206+dfsg-19+b2)
Section: debug
Priority: optional
Description: debug symbols for libgfs-1.3-2
Build-Ids: 6e83d223c0568f18be23a34b14db1679e49184dc d851531a34d98664a7e8f0a1e80c5e4e1714537c
drwxr-xr-x root/root 0 2020-02-10 09:37 ./
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/6e/
-rw-r--r-- root/root 1045464 2020-02-10 09:37 ./usr/lib/debug/.build-id/6e/83d223c0568f18be23a34b14db1679e49184dc.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.build-id/d8/
-rw-r--r-- root/root 1066980 2020-02-10 09:37 ./usr/lib/debug/.build-id/d8/51531a34d98664a7e8f0a1e80c5e4e1714537c.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 40124 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/libgfs-1.3-2.debug
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2-dbgsym -> libgfs-1.3-2
libgfs-1.3-2_20131206+dfsg-19+b2_armhf.deb
------------------------------------------
new Debian package, version 2.0.
size 476620 bytes: control archive=1040 bytes.
748 bytes, 19 lines control
556 bytes, 7 lines md5sums
94 bytes, 2 lines shlibs
65 bytes, 2 lines triggers
Package: libgfs-1.3-2
Source: gerris (20131206+dfsg-19)
Version: 20131206+dfsg-19+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 1620
Depends: libc6 (>= 2.29), libglib2.0-0 (>= 2.30.0), libgts-0.7-5 (>= 0.7.6+darcs121130), libopenmpi3 (>= 4.0.2)
Breaks: libgfs-mpi-1.3-2 (<< 20131206+dfsg-7)
Replaces: libgfs-mpi-1.3-2 (<< 20131206+dfsg-7)
Section: devel
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- shared libraries
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the shared libraries for libgfs.
.
This package has MPI support built in.
drwxr-xr-x root/root 0 2020-02-10 09:37 ./
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0
-rw-r--r-- root/root 762216 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2 -> libgfs3D-1.3.so.2.0.0
-rw-r--r-- root/root 805104 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/
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-rw-r--r-- root/root 4782 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2/changelog.Debian.gz
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libgfs-dev_20131206+dfsg-19+b2_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 103980 bytes: control archive=1880 bytes.
764 bytes, 20 lines control
2844 bytes, 44 lines md5sums
Package: libgfs-dev
Source: gerris (20131206+dfsg-19)
Version: 20131206+dfsg-19+b2
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 319
Depends: ffmpeg, libgfs-1.3-2 (= 20131206+dfsg-19+b2), libgts-dev
Breaks: libgfs-mpi-dev (<< 20131206+dfsg-7)
Replaces: libgfs-mpi-dev (<< 20131206+dfsg-7)
Section: libdevel
Priority: optional
Homepage: http://gfs.sourceforge.net/
Description: Fluid Flow Solver -- development libraries and headers
Gerris is a system for the solution of the partial differential
equations describing fluid flow.
.
This package contains the headers and development libraries needed to
build applications using libgfs.
.
This package has MPI support built in.
drwxr-xr-x root/root 0 2020-02-10 09:37 ./
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/
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-rw-r--r-- root/root 10086 2020-02-10 09:37 ./usr/include/gerris/source.h
-rw-r--r-- root/root 1870 2020-02-10 09:37 ./usr/include/gerris/spatial.h
-rw-r--r-- root/root 4599 2020-02-10 09:37 ./usr/include/gerris/surface.h
-rw-r--r-- root/root 4072 2020-02-10 09:37 ./usr/include/gerris/tension.h
-rw-r--r-- root/root 5180 2020-02-10 09:37 ./usr/include/gerris/timestep.h
-rw-r--r-- root/root 1589 2020-02-10 09:37 ./usr/include/gerris/unstructured.h
-rw-r--r-- root/root 10845 2020-02-10 09:37 ./usr/include/gerris/utils.h
-rw-r--r-- root/root 9866 2020-02-10 09:37 ./usr/include/gerris/variable.h
-rw-r--r-- root/root 195 2020-02-10 09:37 ./usr/include/gerris/version.h
-rw-r--r-- root/root 6340 2020-02-10 09:37 ./usr/include/gerris/vof.h
-rw-r--r-- root/root 2073 2020-02-10 09:37 ./usr/include/gerris/wave.h
-rw-r--r-- root/root 1525 2020-02-10 09:37 ./usr/include/gfs.h
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so -> libgfs3D-1.3.so.2.0.0
lrwxrwxrwx root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D.so -> libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root 274 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris2D.pc
-rw-r--r-- root/root 263 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris3D.pc
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/
-rw-r--r-- root/root 227 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root 4782 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/changelog.Debian.gz
-rw-r--r-- root/root 66168 2013-12-06 15:56 ./usr/share/doc/libgfs-dev/changelog.gz
-rw-r--r-- root/root 1933 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 105008
Build-Time: 488
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 735
Job: gerris_20131206+dfsg-19
Machine Architecture: armhf
Package: gerris
Package-Time: 1243
Source-Version: 20131206+dfsg-19
Space: 105008
Status: successful
Version: 20131206+dfsg-19+b2
--------------------------------------------------------------------------------
Finished at 2020-03-10T12:18:03Z
Build needed 00:20:43, 105008k disk space