Raspbian Package Auto-Building

Build log for genometools (1.6.2+ds-3) on armhf

genometools → 1.6.2+ds-3 → armhf → 2022-12-01 08:28:43 

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03

+==============================================================================+
| genometools 1.6.2+ds-3 (armhf)               Thu, 01 Dec 2022 07:22:39 +0000 |
+==============================================================================+

Package: genometools
Version: 1.6.2+ds-3
Source Version: 1.6.2+ds-3
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-21138af3-6104-4ad0-9754-16024f27bfdb' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.4 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.7 MB in 29s (963 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'genometools' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/genometools.git
Please use:
git clone https://salsa.debian.org/med-team/genometools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 7557 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main genometools 1.6.2+ds-3 (dsc) [2877 B]
Get:2 http://172.17.4.1/private bookworm-staging/main genometools 1.6.2+ds-3 (tar) [7484 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main genometools 1.6.2+ds-3 (diff) [70.6 kB]
Fetched 7557 kB in 1s (9481 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/genometools-NZwaGh/genometools-1.6.2+ds' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/genometools-NZwaGh' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-MwMt5y/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-MwMt5y/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-MwMt5y/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Packages [429 B]
Fetched 2105 B in 1s (2565 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libldap-common libpam-cap libperl5.34 netbase perl-modules-5.34
  sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 80 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14830 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 13), debhelper-compat (= 13), dh-python, liblua5.1-0-dev, lua-md5-dev, lua-filesystem-dev, lua-lpeg-dev, libcairo2-dev, zlib1g-dev, libbz2-dev, libexpat1-dev, libsqlite3-dev, libbam-dev, libpango1.0-dev, libtre-dev, texlive-latex-base, texlive-latex-extra, texlive-fonts-extra, texlive-latex-recommended, texlive-fonts-recommended, python3-all, python3-setuptools, asciidoc-base, libxml2-utils, xsltproc, ruby, docbook-xsl, docbook-xml, faketime, imagemagick
Filtered Build-Depends: debhelper (>= 13), debhelper-compat (= 13), dh-python, liblua5.1-0-dev, lua-md5-dev, lua-filesystem-dev, lua-lpeg-dev, libcairo2-dev, zlib1g-dev, libbz2-dev, libexpat1-dev, libsqlite3-dev, libbam-dev, libpango1.0-dev, libtre-dev, texlive-latex-base, texlive-latex-extra, texlive-fonts-extra, texlive-latex-recommended, texlive-fonts-recommended, python3-all, python3-setuptools, asciidoc-base, libxml2-utils, xsltproc, ruby, docbook-xsl, docbook-xml, faketime, imagemagick
dpkg-deb: building package 'sbuild-build-depends-genometools-dummy' in '/<<BUILDDIR>>/resolver-MwMt5y/apt_archive/sbuild-build-depends-genometools-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-genometools-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Sources [693 B]
Get:5 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ Packages [771 B]
Fetched 2797 B in 1s (3844 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install genometools build dependencies (apt-based resolver)
-----------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libldap-common libpam-cap libperl5.34 netbase perl-modules-5.34
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  asciidoc-base asciidoc-common autoconf automake autopoint autotools-dev
  bsdextrautils bsdutils ca-certificates debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docbook-xml docbook-xsl dwz faketime file fontconfig
  fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
  gir1.2-freedesktop gir1.2-glib-2.0 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0
  groff-base hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian libaom3 libapache-pom-java
  libarchive-zip-perl libbam-dev libblkid-dev libblkid1 libbrotli-dev
  libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo-script-interpreter2
  libcairo2 libcairo2-dev libcommons-logging-java libcommons-parent-java
  libdatrie-dev libdatrie1 libdav1d6 libde265-0 libdebhelper-perl libdeflate0
  libedit2 libelf1 libexpat1 libexpat1-dev libfaketime libffi-dev libffi8
  libfftw3-double3 libfile-stripnondeterminism-perl libfontbox-java
  libfontconfig-dev libfontconfig1 libfreetype-dev libfreetype6
  libfreetype6-dev libfribidi-dev libfribidi0 libgirepository-1.0-1
  libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev
  libglib2.0-dev-bin libgraphite2-3 libgraphite2-dev libharfbuzz-dev
  libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libheif1 libice-dev
  libice6 libicu-dev libicu72 libjbig0 libjpeg62-turbo libkpathsea6 liblcms2-2
  liblerc4 liblqr-1-0 libltdl7 liblua5.1-0 liblua5.1-0-dev liblzo2-2
  libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmd0
  libmount-dev libmount1 libmpdec3 libncurses-dev libncurses6 libopenjp2-7
  libpango-1.0-0 libpango1.0-dev libpangocairo-1.0-0 libpangoft2-1.0-0
  libpangoxft-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0
  libpcre2-8-0 libpcre2-dev libpcre2-posix3 libpdfbox-java libpipeline1
  libpixman-1-0 libpixman-1-dev libpkgconf3 libpng-dev libpng16-16 libptexenc1
  libpthread-stubs0-dev libpython3-stdlib libpython3.10-minimal
  libpython3.10-stdlib libreadline-dev libreadline8 libruby libruby3.0
  libselinux1-dev libsepol-dev libsm-dev libsm6 libsmartcols1 libsqlite3-0
  libsqlite3-dev libssl3 libsub-override-perl libsynctex2 libteckit0
  libtexlua53-5 libtexluajit2 libthai-data libthai-dev libthai0 libtiff5
  libtool libtre-dev libtre5 libuchardet0 libuuid1 libwebp7 libwebpdemux2
  libwebpmux3 libx11-6 libx11-data libx11-dev libx265-199 libxau-dev libxau6
  libxaw7 libxcb-render0 libxcb-render0-dev libxcb-shm0 libxcb-shm0-dev
  libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxft-dev
  libxft2 libxi6 libxml2 libxml2-utils libxmu6 libxpm4 libxrender-dev
  libxrender1 libxslt1.1 libxt6 libyaml-0-2 libzzip-0-13 lua-filesystem
  lua-filesystem-dev lua-lpeg lua-lpeg-dev lua-md5 lua-md5-dev m4 man-db
  media-types mount openssl pango1.0-tools pkg-config pkgconf pkgconf-bin
  po-debconf preview-latex-style python3 python3-all python3-distutils
  python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools
  python3.10 python3.10-minimal rake readline-common ruby ruby-net-telnet
  ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.0
  rubygems-integration sgml-data t1utils tex-common texlive-base
  texlive-binaries texlive-fonts-extra texlive-fonts-recommended
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures ucf util-linux util-linux-extra uuid-dev x11-common
  x11proto-core-dev x11proto-dev xdg-utils xml-core xorg-sgml-doctools
  xsltproc xtrans-dev zlib1g-dev
Suggested packages:
  asciidoc-doc docbook-utils source-highlight autoconf-archive gnu-standards
  autoconf-doc dh-make flit python3-build python3-tomli python3-installer
  docbook docbook-dsssl docbook-defguide dbtoepub docbook-xsl-doc-html
  | docbook-xsl-doc-pdf | docbook-xsl-doc-text | docbook-xsl-doc
  docbook-xsl-saxon fop libsaxon-java libxalan2-java libxslthl-java xalan
  gettext-doc libasprintf-dev libgettextpo-dev groff imagemagick-doc autotrace
  cups-bsd | lpr | lprng curl enscript ffmpeg gimp gnuplot grads graphviz
  hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils transfig
  ufraw-batch libcairo2-doc libavalon-framework-java
  libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java
  libdatrie-doc libfftw3-bin libfftw3-dev freetype2-doc low-memory-monitor
  libgirepository1.0-dev libglib2.0-doc libgdk-pixbuf2.0-bin
  libgraphite2-utils libice-doc icu-doc liblcms2-utils
  libmagickcore-6.q16-6-extra cryptsetup-bin ncurses-doc libpango1.0-doc
  readline-doc libsm-doc sqlite3-doc libthai-doc libtool-doc gfortran
  | fortran95-compiler gcj-jdk tre-agrep libx11-doc libxcb-doc libxext-doc
  m4-doc apparmor less www-browser nfs-common graphicsmagick libmail-box-perl
  python3-doc python3-tk python3-venv python-setuptools-doc python3.10-venv
  python3.10-doc binfmt-support ri ruby-dev bundler perlsgml w3-recs opensp
  ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec
  texlive-fonts-extra-doc texlive-fonts-recommended-doc texlive-latex-base-doc
  python3-pygments icc-profiles libfile-which-perl texlive-latex-extra-doc
  texlive-science texlive-latex-recommended-doc texlive-luatex
  texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex dosfstools kbd
  util-linux-locales
Recommended packages:
  xmlto curl | wget | lynx libmagickcore-6.q16-6-extra ghostscript netpbm
  bzip2-doc libarchive-cpio-perl shared-mime-info xdg-user-dirs libtool-bin
  gsfonts libgpm2 libpng-tools libltdl-dev uuid-runtime libmail-sendmail-perl
  zip fonts-lato libjs-jquery lmodern dvisvgm cm-super fonts-adf-accanthis
  fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis
  fonts-alegreya-sans fonts-cabin fonts-cantarell fonts-clear-sans
  fonts-comfortaa fonts-comic-neue fonts-croscore fonts-crosextra-caladea
  fonts-crosextra-carlito fonts-dejavu-extra fonts-ebgaramond
  fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf
  fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot
  fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-inter
  fonts-junicode fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji
  fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans
  fonts-paratype fonts-roboto-slab fonts-roboto-unhinted fonts-sil-andika
  fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic
  fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix
  texlive-fonts-extra-links tex-gyre tipa default-jre
  libspreadsheet-parseexcel-perl texlive-plain-generic tk
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  asciidoc-base asciidoc-common autoconf automake autopoint autotools-dev
  bsdextrautils ca-certificates debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docbook-xml docbook-xsl dwz faketime file fontconfig
  fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
  gir1.2-freedesktop gir1.2-glib-2.0 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0
  groff-base hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian libaom3 libapache-pom-java
  libarchive-zip-perl libbam-dev libblkid-dev libbrotli-dev libbrotli1 libbsd0
  libbz2-dev libcairo-gobject2 libcairo-script-interpreter2 libcairo2
  libcairo2-dev libcommons-logging-java libcommons-parent-java libdatrie-dev
  libdatrie1 libdav1d6 libde265-0 libdebhelper-perl libdeflate0 libedit2
  libelf1 libexpat1 libexpat1-dev libfaketime libffi-dev libfftw3-double3
  libfile-stripnondeterminism-perl libfontbox-java libfontconfig-dev
  libfontconfig1 libfreetype-dev libfreetype6 libfreetype6-dev libfribidi-dev
  libfribidi0 libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin
  libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgraphite2-3
  libgraphite2-dev libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0
  libharfbuzz0b libheif1 libice-dev libice6 libicu-dev libicu72 libjbig0
  libjpeg62-turbo libkpathsea6 liblcms2-2 liblerc4 liblqr-1-0 libltdl7
  liblua5.1-0 liblua5.1-0-dev liblzo2-2 libmagic-mgc libmagic1
  libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmd0 libmount-dev libmpdec3
  libncurses-dev libncurses6 libopenjp2-7 libpango-1.0-0 libpango1.0-dev
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpangoxft-1.0-0 libpaper-utils
  libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
  libpdfbox-java libpipeline1 libpixman-1-0 libpixman-1-dev libpkgconf3
  libpng-dev libpng16-16 libptexenc1 libpthread-stubs0-dev libpython3-stdlib
  libpython3.10-minimal libpython3.10-stdlib libreadline-dev libruby
  libruby3.0 libselinux1-dev libsepol-dev libsm-dev libsm6 libsqlite3-dev
  libsub-override-perl libsynctex2 libteckit0 libtexlua53-5 libtexluajit2
  libthai-data libthai-dev libthai0 libtiff5 libtool libtre-dev libtre5
  libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx11-dev libx265-199 libxau-dev libxau6 libxaw7 libxcb-render0
  libxcb-render0-dev libxcb-shm0 libxcb-shm0-dev libxcb1 libxcb1-dev
  libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxft-dev libxft2 libxi6
  libxml2 libxml2-utils libxmu6 libxpm4 libxrender-dev libxrender1 libxslt1.1
  libxt6 libyaml-0-2 libzzip-0-13 lua-filesystem lua-filesystem-dev lua-lpeg
  lua-lpeg-dev lua-md5 lua-md5-dev m4 man-db media-types openssl
  pango1.0-tools pkg-config pkgconf pkgconf-bin po-debconf preview-latex-style
  python3 python3-all python3-distutils python3-lib2to3 python3-minimal
  python3-pkg-resources python3-setuptools python3.10 python3.10-minimal rake
  ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc
  ruby3.0 rubygems-integration sbuild-build-depends-genometools-dummy
  sgml-data t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-extra texlive-fonts-recommended texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures ucf uuid-dev
  x11-common x11proto-core-dev x11proto-dev xdg-utils xml-core
  xorg-sgml-doctools xsltproc xtrans-dev zlib1g-dev
The following packages will be upgraded:
  bsdutils libblkid1 libffi8 libmount1 libpcre2-8-0 libreadline8 libsmartcols1
  libsqlite3-0 libssl3 libuuid1 mount readline-common util-linux
  util-linux-extra
14 upgraded, 242 newly installed, 0 to remove and 66 not upgraded.
Need to get 678 MB of archives.
After this operation, 2076 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-MwMt5y/apt_archive ./ sbuild-build-depends-genometools-dummy 0.invalid.0 [1064 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf bsdutils armhf 1:2.38.1-4 [83.9 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libsmartcols1 armhf 2.38.1-4 [91.6 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf util-linux-extra armhf 2.38.1-4 [98.1 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf util-linux armhf 2.38.1-4 [1062 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf mount armhf 2.38.1-4 [126 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.38-2 [273 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3 [352 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libuuid1 armhf 2.38.1-4 [27.1 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.13.1-4.5 [281 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.13.1-4.5 [330 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libaom3 armhf 3.5.0-1 [1302 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf libdav1d6 armhf 1.0.0-2+rpi1 [205 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libde265-0 armhf 1.0.9-1+rpi1 [186 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libx265-199 armhf 3.5-2 [548 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libheif1 armhf 1.13.0-1 [169 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.13.1-1 [125 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf libffi8 armhf 3.4.4-1 [19.4 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libblkid1 armhf 2.38.1-4 [131 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libmount1 armhf 2.38.1-4 [144 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-8-0 armhf 10.40-2 [222 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.1-2 [1214 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libltdl7 armhf 2.4.7-5 [390 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libopenjp2-7 armhf 2.5.0-1 [165 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.2-2+b1 [237 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libtiff5 armhf 4.4.0-6 [278 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libwebpdemux2 armhf 1.2.2-2+b1 [95.5 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libwebpmux3 armhf 1.2.2-2+b1 [103 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-1 [112 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.1-2 [308 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.1-2 [704 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf imagemagick-6-common all 8:6.9.11.60+dfsg-1.3 [211 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.11.60+dfsg-1.3+b4 [1607 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.11.60+dfsg-1.3+b4 [385 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-1 [1614 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.8-3 [769 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.8-3 [1478 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-1 [38.7 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf readline-common all 8.2-1.2 [68.5 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libreadline8 armhf 8.2-1.2 [142 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libsqlite3-0 armhf 3.40.0-1 [723 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.8-3 [1597 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.8-3 [506 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-1 [21.7 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.6-1 [38.2 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.1-1 [1341 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-1 [1349 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf asciidoc-common all 10.2.0-1 [109 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf docbook-xsl all 1.79.2+dfsg-2 [1237 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libxml2-utils armhf 2.9.14+dfsg-1.1 [95.5 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf xsltproc armhf 1.1.35-1 [126 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf asciidoc-base all 10.2.0-1 [89.5 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.1 [80.8 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14+20220924-2 [93.1 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.1 [941 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf sgml-data all 2.0.11+nmu1 [179 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf docbook-xml all 4.5-12 [85.2 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libfaketime armhf 0.9.10-2.1 [46.2 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf faketime armhf 0.9.10-2.1 [17.6 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf fontconfig armhf 2.13.1-4.5 [416 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf fonts-lmodern all 2.005-1 [4540 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libgirepository-1.0-1 armhf 1.74.0-2 [97.5 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf gir1.2-glib-2.0 armhf 1.74.0-2 [170 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf gir1.2-freedesktop armhf 1.74.0-2 [47.5 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf gir1.2-harfbuzz-0.0 armhf 5.2.0-2+b1 [1520 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 5.2.0-2+b1 [1832 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.50.10+ds-1 [214 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-6 [496 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.50.10+ds-1 [68.6 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.50.10+ds-1 [58.3 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf libpangoxft-1.0-0 armhf 1.50.10+ds-1 [52.3 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf gir1.2-pango-1.0 armhf 1.50.10+ds-1 [65.5 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf icu-devtools armhf 72.1-3 [175 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf imagemagick-6.q16 armhf 8:6.9.11.60+dfsg-1.3+b4 [339 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf imagemagick armhf 8:6.9.11.60+dfsg-1.3+b4 [121 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libapache-pom-java all 25-2 [5260 B]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4.1 [183 kB]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libbam-dev armhf 0.1.19+dfsg-5 [106 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf uuid-dev armhf 2.38.1-4 [37.7 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libblkid-dev armhf 2.38.1-4 [162 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libbrotli-dev armhf 1.0.9-2+b2 [271 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libbz2-dev armhf 1.0.8-5+b2 [26.8 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf libcairo-gobject2 armhf 1.16.0-6 [125 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf liblzo2-2 armhf 2.10-2 [50.2 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libcairo-script-interpreter2 armhf 1.16.0-6 [154 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.5.0-1 [130 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf libpng-dev armhf 1.6.38-2 [352 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf libfreetype-dev armhf 2.12.1+dfsg-3 [516 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6-dev armhf 2.12.1+dfsg-3 [70.8 kB]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf libpkgconf3 armhf 1.8.0-11 [30.8 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf pkgconf-bin armhf 1.8.0-11 [27.6 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf pkgconf armhf 1.8.0-11 [25.6 kB]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf pkg-config armhf 1.8.0-11 [13.4 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig-dev armhf 2.13.1-4.5 [348 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf libffi-dev armhf 3.4.4-1 [60.4 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-data all 2.74.1-2 [1209 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-bin armhf 2.74.1-2 [101 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-dev-bin armhf 2.74.1-2 [147 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf libsepol-dev armhf 3.4-2 [319 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-16-0 armhf 10.40-2 [208 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-32-0 armhf 10.40-2 [199 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-posix3 armhf 10.40-2 [53.2 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-dev armhf 10.40-2 [644 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf libselinux1-dev armhf 3.4-1 [162 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf libmount-dev armhf 2.38.1-4 [22.2 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-dev armhf 2.74.1-2 [1472 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-dev armhf 0.42.2-1 [480 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf x11proto-dev all 2022.1-1 [599 kB]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf x11proto-core-dev all 2022.1-1 [3528 B]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf libice-dev armhf 2:1.0.10-1 [58.7 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf libsm-dev armhf 2:1.2.3-1 [35.4 kB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf libxau-dev armhf 1:1.0.9-1 [22.3 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf xtrans-dev all 1.4.0-1 [98.7 kB]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf libxcb1-dev armhf 1.15-1 [175 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf libx11-dev armhf 2:1.8.1-2 [780 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0-dev armhf 1.15-1 [117 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0-dev armhf 1.15-1 [107 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf libxext-dev armhf 2:1.3.4-1 [102 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf libxrender-dev armhf 1:0.9.10-1.1 [37.6 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf libcairo2-dev armhf 1.16.0-6 [614 kB]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf libcommons-logging-java all 1.2-3 [62.4 kB]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf libdatrie-dev armhf 0.2.13-2+b2 [15.2 kB]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf libedit2 armhf 3.1-20221030-2 [76.2 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf libfribidi-dev armhf 1.0.8-2.1 [103 kB]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-dev armhf 1.3.14-1 [24.0 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz-icu0 armhf 5.2.0-2+b1 [1496 kB]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz-gobject0 armhf 5.2.0-2+b1 [1509 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf libicu-dev armhf 72.1-3 [9959 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz-dev armhf 5.2.0-2+b1 [1606 kB]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf libkpathsea6 armhf 2022.20220321.62855-4+b1 [142 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf liblua5.1-0 armhf 5.1.5-9 [86.7 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf libncurses6 armhf 6.3+20220423-2 [79.6 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf libncurses-dev armhf 6.3+20220423-2 [289 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf libreadline-dev armhf 8.2-1.2 [122 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf liblua5.1-0-dev armhf 5.1.5-9 [116 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf libthai-dev armhf 0.1.29-1 [21.6 kB]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf libxft-dev armhf 2.3.6-1 [71.1 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf pango1.0-tools armhf 1.50.10+ds-1 [64.9 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf libpango1.0-dev armhf 1.50.10+ds-1 [179 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf libptexenc1 armhf 2022.20220321.62855-4+b1 [40.2 kB]
Get:211 http://172.17.4.1/private bookworm-staging/main armhf rubygems-integration all 1.18 [6704 B]
Get:212 http://172.17.4.1/private bookworm-staging/main armhf ruby3.0 armhf 3.0.4-8 [683 kB]
Get:213 http://172.17.4.1/private bookworm-staging/main armhf ruby-rubygems all 3.3.15-1 [293 kB]
Get:214 http://172.17.4.1/private bookworm-staging/main armhf ruby armhf 1:3.0+3.1 [12.2 kB]
Get:215 http://172.17.4.1/private bookworm-staging/main armhf rake all 13.0.6-3 [83.9 kB]
Get:216 http://172.17.4.1/private bookworm-staging/main armhf ruby-net-telnet all 0.1.1-2.1 [12.7 kB]
Get:217 http://172.17.4.1/private bookworm-staging/main armhf ruby-webrick all 1.7.0-4 [50.9 kB]
Get:218 http://172.17.4.1/private bookworm-staging/main armhf ruby-xmlrpc all 0.3.2-2 [24.4 kB]
Get:219 http://172.17.4.1/private bookworm-staging/main armhf ruby-sdbm armhf 1.0.0-5 [13.4 kB]
Get:220 http://172.17.4.1/private bookworm-staging/main armhf libyaml-0-2 armhf 0.2.5-1 [44.6 kB]
Get:221 http://172.17.4.1/private bookworm-staging/main armhf libruby3.0 armhf 3.0.4-8 [5136 kB]
Get:222 http://172.17.4.1/private bookworm-staging/main armhf libruby armhf 1:3.0+3.1 [11.3 kB]
Get:223 http://172.17.4.1/private bookworm-staging/main armhf libsqlite3-dev armhf 3.40.0-1 [892 kB]
Get:224 http://172.17.4.1/private bookworm-staging/main armhf libsynctex2 armhf 2022.20220321.62855-4+b1 [46.4 kB]
Get:225 http://172.17.4.1/private bookworm-staging/main armhf libteckit0 armhf 2.5.11+ds1-1 [256 kB]
Get:226 http://172.17.4.1/private bookworm-staging/main armhf libtexlua53-5 armhf 2022.20220321.62855-4+b1 [80.6 kB]
Get:227 http://172.17.4.1/private bookworm-staging/main armhf libtexluajit2 armhf 2022.20220321.62855-4+b1 [187 kB]
Get:228 http://172.17.4.1/private bookworm-staging/main armhf libtre5 armhf 0.8.0-6 [52.0 kB]
Get:229 http://172.17.4.1/private bookworm-staging/main armhf libtre-dev armhf 0.8.0-6 [27.4 kB]
Get:230 http://172.17.4.1/private bookworm-staging/main armhf libxt6 armhf 1:1.2.1-1 [159 kB]
Get:231 http://172.17.4.1/private bookworm-staging/main armhf libxmu6 armhf 2:1.1.3-3 [52.0 kB]
Get:232 http://172.17.4.1/private bookworm-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:233 http://172.17.4.1/private bookworm-staging/main armhf libxaw7 armhf 2:1.0.14-1 [165 kB]
Get:234 http://172.17.4.1/private bookworm-staging/main armhf libxi6 armhf 2:1.8-1 [78.1 kB]
Get:235 http://172.17.4.1/private bookworm-staging/main armhf libzzip-0-13 armhf 0.13.72+dfsg.1-1.1 [54.3 kB]
Get:236 http://172.17.4.1/private bookworm-staging/main armhf lua-filesystem armhf 1.8.0-2 [11.9 kB]
Get:237 http://172.17.4.1/private bookworm-staging/main armhf lua-filesystem-dev armhf 1.8.0-2 [26.0 kB]
Get:238 http://172.17.4.1/private bookworm-staging/main armhf lua-lpeg armhf 1.0.2-2 [32.3 kB]
Get:239 http://172.17.4.1/private bookworm-staging/main armhf lua-lpeg-dev armhf 1.0.2-2 [49.5 kB]
Get:240 http://172.17.4.1/private bookworm-staging/main armhf lua-md5 armhf 1.2+git+1+8d87fee-2 [11.6 kB]
Get:241 http://172.17.4.1/private bookworm-staging/main armhf lua-md5-dev armhf 1.2+git+1+8d87fee-2 [18.7 kB]
Get:242 http://172.17.4.1/private bookworm-staging/main armhf tex-common all 6.18 [32.5 kB]
Get:243 http://172.17.4.1/private bookworm-staging/main armhf preview-latex-style all 12.2-1 [201 kB]
Get:244 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.10.6-1 [1060 B]
Get:245 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 65.5.0-1 [278 kB]
Get:246 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 65.5.0-1 [519 kB]
Get:247 http://172.17.4.1/private bookworm-staging/main armhf t1utils armhf 1.41-4 [52.3 kB]
Get:248 http://172.17.4.1/private bookworm-staging/main armhf texlive-binaries armhf 2022.20220321.62855-4+b1 [7470 kB]
Get:249 http://172.17.4.1/private bookworm-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:250 http://172.17.4.1/private bookworm-staging/main armhf texlive-base all 2022.20220923-2 [21.9 MB]
Get:251 http://172.17.4.1/private bookworm-staging/main armhf texlive-fonts-extra all 2022.20220923-3 [507 MB]
Get:252 http://172.17.4.1/private bookworm-staging/main armhf texlive-fonts-recommended all 2022.20220923-2 [4988 kB]
Get:253 http://172.17.4.1/private bookworm-staging/main armhf texlive-latex-base all 2022.20220923-2 [1171 kB]
Get:254 http://172.17.4.1/private bookworm-staging/main armhf texlive-latex-recommended all 2022.20220923-2 [8818 kB]
Get:255 http://172.17.4.1/private bookworm-staging/main armhf texlive-pictures all 2022.20220923-2 [15.3 MB]
Get:256 http://172.17.4.1/private bookworm-staging/main armhf texlive-latex-extra all 2022.20220923-3 [14.8 MB]
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No schema files found: doing nothing.
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invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
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update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Creating config file /etc/papersize with new version
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update-language: texlive-base not installed and configured, doing nothing!
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Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
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Setting up libx11-6:armhf (2:1.8.1-2) ...
Setting up libharfbuzz0b:armhf (5.2.0-2+b1) ...
Setting up libxml2-utils (2.9.14+dfsg-1.1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libmount-dev:armhf (2.38.1-4) ...
Setting up libpython3-stdlib:armhf (3.10.6-1) ...
Setting up gir1.2-freedesktop:armhf (1.74.0-2) ...
Setting up libharfbuzz-icu0:armhf (5.2.0-2+b1) ...
Setting up python3.10 (3.10.8-3) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up liblua5.1-0-dev:armhf (5.1.5-9) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up preview-latex-style (12.2-1) ...
Setting up xsltproc (1.1.35-1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3 (3.10.6-1) ...
Setting up rubygems-integration (1.18) ...
Setting up libharfbuzz-gobject0:armhf (5.2.0-2+b1) ...
Setting up man-db (2.11.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gir1.2-harfbuzz-0.0:armhf (5.2.0-2+b1) ...
Setting up libfreetype-dev:armhf (2.12.1+dfsg-3) ...
Setting up asciidoc-common (10.2.0-1) ...
Setting up libxt6:armhf (1:1.2.1-1) ...
Setting up libthai-dev:armhf (0.1.29-1) ...
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up python3-pkg-resources (65.5.0-1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up libglib2.0-dev-bin (2.74.1-2) ...
Setting up libxmu6:armhf (2:1.1.3-3) ...
Setting up python3-setuptools (65.5.0-1) ...
Setting up libxi6:armhf (2:1.8-1) ...
Setting up python3-all (3.10.6-1) ...
Setting up debhelper (13.11.1) ...
Setting up libxaw7:armhf (2:1.0.14-1) ...
Setting up libfreetype6-dev:armhf (2.12.1+dfsg-3) ...
Setting up libglib2.0-dev:armhf (2.74.1-2) ...
Setting up libharfbuzz-dev:armhf (5.2.0-2+b1) ...
Setting up ruby3.0 (3.0.4-8) ...
Setting up libruby:armhf (1:3.0+3.1) ...
Setting up ruby (1:3.0+3.1) ...
Setting up rake (13.0.6-3) ...
Setting up libruby3.0:armhf (3.0.4-8) ...
Setting up ruby-rubygems (3.3.15-1) ...
Setting up ruby-sdbm:armhf (1.0.0-5) ...
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up sgml-data (2.0.11+nmu1) ...
Setting up libfontconfig1:armhf (2.13.1-4.5) ...
Setting up x11proto-dev (2022.1-1) ...
Setting up fontconfig (2.13.1-4.5) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libxau-dev:armhf (1:1.0.9-1) ...
Setting up libice-dev:armhf (2:1.0.10-1) ...
Setting up libfontconfig-dev:armhf (2.13.1-4.5) ...
Setting up libsm-dev:armhf (2:1.2.3-1) ...
Setting up libpango-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libcairo2:armhf (1.16.0-6) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.11.60+dfsg-1.3+b4) ...
Setting up x11proto-core-dev (2022.1-1) ...
Setting up docbook-xsl (1.79.2+dfsg-2) ...
Setting up texlive-binaries (2022.20220321.62855-4+b1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libmagickwand-6.q16-6:armhf (8:6.9.11.60+dfsg-1.3+b4) ...
Setting up libcairo-gobject2:armhf (1.16.0-6) ...
Setting up libpangoft2-1.0-0:armhf (1.50.10+ds-1) ...
Setting up texlive-base (2022.20220923-2) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up libpangocairo-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libcairo-script-interpreter2:armhf (1.16.0-6) ...
Setting up libxcb1-dev:armhf (1.15-1) ...
Setting up libpangoxft-1.0-0:armhf (1.50.10+ds-1) ...
Setting up pango1.0-tools (1.50.10+ds-1) ...
Setting up libx11-dev:armhf (2:1.8.1-2) ...
Setting up libxcb-shm0-dev:armhf (1.15-1) ...
Setting up asciidoc-base (10.2.0-1) ...
Setting up gir1.2-pango-1.0:armhf (1.50.10+ds-1) ...
Setting up texlive-latex-base (2022.20220923-2) ...
Setting up texlive-fonts-extra (2022.20220923-3) ...
Setting up texlive-latex-recommended (2022.20220923-2) ...
Setting up libxcb-render0-dev:armhf (1.15-1) ...
Setting up texlive-pictures (2022.20220923-2) ...
Setting up libxext-dev:armhf (2:1.3.4-1) ...
Setting up imagemagick-6.q16 (8:6.9.11.60+dfsg-1.3+b4) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up texlive-fonts-recommended (2022.20220923-2) ...
Setting up libxrender-dev:armhf (1:0.9.10-1.1) ...
Setting up libxft-dev:armhf (2.3.6-1) ...
Setting up texlive-latex-extra (2022.20220923-3) ...
Setting up imagemagick (8:6.9.11.60+dfsg-1.3+b4) ...
Setting up libcairo2-dev:armhf (1.16.0-6) ...
Setting up libpango1.0-dev:armhf (1.50.10+ds-1) ...
Processing triggers for sgml-base (1.31) ...
Setting up docbook-xml (4.5-12) ...
Processing triggers for sgml-base (1.31) ...
Setting up sbuild-build-depends-genometools-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for tex-common (6.18) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.39-6+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-3+rpi1 gcc-12_12.2.0-3+rpi1 libc6-dev_2.35-2+rpi1 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 apt_2.5.3 asciidoc-base_10.2.0-1 asciidoc-common_10.2.0-1 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-6+rpi1 binutils-arm-linux-gnueabihf_2.39-6+rpi1 binutils-common_2.39-6+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-3+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.11.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dirmngr_2.2.39-1 docbook-xml_4.5-12 docbook-xsl_1.79.2+dfsg-2 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 faketime_0.9.10-2.1 file_1:5.41-4 findutils_4.9.0-3 fontconfig_2.13.1-4.5 fontconfig-config_2.13.1-4.5 fonts-dejavu-core_2.37-2 fonts-lmodern_2.005-1 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-3+rpi1 gcc_4:12.2.0-1+rpi1 gcc-10-base_10.4.0-5+rpi1 gcc-12_12.2.0-3+rpi1 gcc-12-base_12.2.0-3+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gir1.2-freedesktop_1.74.0-2 gir1.2-glib-2.0_1.74.0-2 gir1.2-harfbuzz-0.0_5.2.0-2+b1 gir1.2-pango-1.0_1.50.10+ds-1 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-9 gzip_1.12-1 hicolor-icon-theme_0.17-2 hostname_3.23 icu-devtools_72.1-3 imagemagick_8:6.9.11.60+dfsg-1.3+b4 imagemagick-6-common_8:6.9.11.60+dfsg-1.3 imagemagick-6.q16_8:6.9.11.60+dfsg-1.3+b4 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20211215-1 krb5-locales_1.20-1 libacl1_2.3.1-1 libaom3_3.5.0-1 libapache-pom-java_25-2 libapt-pkg6.0_2.5.3 libarchive-zip-perl_1.68-1 libasan8_12.2.0-3+rpi1 libassuan0_2.5.5-4 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libhogweed6_3.8.1-2 libice-dev_2:1.0.10-1 libice6_2:1.0.10-1 libicu-dev_72.1-3 libicu72_72.1-3 libidn2-0_2.3.3-1 libisl23_0.25-1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:2.1.2-1 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkpathsea6_2022.20220321.62855-4+b1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 liblcms2-2_2.13.1-1 libldap-2.4-2_2.4.59+dfsg-1 libldap-2.5-0_2.5.13+dfsg-2+rpi1 libldap-common_2.5.13+dfsg-2+rpi1 liblerc4_4.0.0+ds-2 liblocale-gettext-perl_1.07-4+b3 liblqr-1-0_0.4.2-2.1 libltdl7_2.4.7-5 liblua5.1-0_5.1.5-9 liblua5.1-0-dev_5.1.5-9 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 liblzo2-2_2.10-2 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmagickcore-6.q16-6_8:6.9.11.60+dfsg-1.3+b4 libmagickwand-6.q16-6_8:6.9.11.60+dfsg-1.3+b4 libmd0_1.0.4-2 libmount-dev_2.38.1-4 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncurses-dev_6.3+20220423-2 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libopenjp2-7_2.5.0-1 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpango-1.0-0_1.50.10+ds-1 libpango1.0-dev_1.50.10+ds-1 libpangocairo-1.0-0_1.50.10+ds-1 libpangoft2-1.0-0_1.50.10+ds-1 libpangoxft-1.0-0_1.50.10+ds-1 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre2-16-0_10.40-2 libpcre2-32-0_10.40-2 libpcre2-8-0_10.40-2 libpcre2-dev_10.40-2 libpcre2-posix3_10.40-2 libpcre3_2:8.39-14 libpdfbox-java_1:1.8.16-2 libperl5.34_5.34.0-5 libperl5.36_5.36.0-4 libpipeline1_1.5.7-1 libpixman-1-0_0.42.2-1 libpixman-1-dev_0.42.2-1 libpkgconf3_1.8.0-11 libpng-dev_1.6.38-2 libpng16-16_1.6.38-2 libptexenc1_2022.20220321.62855-4+b1 libpthread-stubs0-dev_0.4-1 libpython3-stdlib_3.10.6-1 libpython3.10-minimal_3.10.8-3 libpython3.10-stdlib_3.10.8-3 libreadline-dev_8.2-1.2 libreadline8_8.2-1.2 libruby_1:3.0+3.1 libruby3.0_3.0.4-8 libsasl2-2_2.1.28+dfsg-8 libsasl2-modules-db_2.1.28+dfsg-8 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libselinux1-dev_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol-dev_3.4-2 libsepol2_3.4-2 libsm-dev_2:1.2.3-1 libsm6_2:1.2.3-1 libsmartcols1_2.38.1-4 libsqlite3-0_3.40.0-1 libsqlite3-dev_3.40.0-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 libsub-override-perl_0.09-4 libsynctex2_2022.20220321.62855-4+b1 libsystemd0_251.5-1+rpi1 libtasn1-6_4.19.0-2 libteckit0_2.5.11+ds1-1 libtexlua53-5_2022.20220321.62855-4+b1 libtexluajit2_2022.20220321.62855-4+b1 libtext-charwidth-perl_0.04-10+b3 libtext-iconv-perl_1.7-7+b3 libthai-data_0.1.29-1 libthai-dev_0.1.29-1 libthai0_0.1.29-1 libtiff5_4.4.0-6 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtre-dev_0.8.0-6 libtre5_0.8.0-6 libubsan1_12.2.0-3+rpi1 libuchardet0_0.0.7-1 libudev1_251.5-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-4 libwebp7_1.2.2-2+b1 libwebpdemux2_1.2.2-2+b1 libwebpmux3_1.2.2-2+b1 libx11-6_2:1.8.1-2 libx11-data_2:1.8.1-2 libx11-dev_2:1.8.1-2 libx265-199_3.5-2 libxau-dev_1:1.0.9-1 libxau6_1:1.0.9-1 libxaw7_2:1.0.14-1 libxcb-render0_1.15-1 libxcb-render0-dev_1.15-1 libxcb-shm0_1.15-1 libxcb-shm0-dev_1.15-1 libxcb1_1.15-1 libxcb1-dev_1.15-1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext-dev_2:1.3.4-1 libxext6_2:1.3.4-1 libxft-dev_2.3.6-1 libxft2_2.3.6-1 libxi6_2:1.8-1 libxml2_2.9.14+dfsg-1.1 libxml2-utils_2.9.14+dfsg-1.1 libxmu6_2:1.1.3-3 libxpm4_1:3.5.12-1 libxrender-dev_1:0.9.10-1.1 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxt6_1:1.2.1-1 libxxhash0_0.8.1-1 libyaml-0-2_0.2.5-1 libzstd1_1.5.2+dfsg-1 libzzip-0-13_0.13.72+dfsg.1-1.1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.12.3+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 lua-filesystem_1.8.0-2 lua-filesystem-dev_1.8.0-2 lua-lpeg_1.0.2-2 lua-lpeg-dev_1.0.2-2 lua-md5_1.2+git+1+8d87fee-2 lua-md5-dev_1.2+git+1+8d87fee-2 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-4 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.3 openssl_3.0.7-1 pango1.0-tools_1.50.10+ds-1 passwd_1:4.12.3+dfsg1-1 patch_2.7.6-7 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 pinentry-curses_1.2.0-2 pkg-config_1.8.0-11 pkgconf_1.8.0-11 pkgconf-bin_1.8.0-11 po-debconf_1.0.21+nmu1 preview-latex-style_12.2-1 python3_3.10.6-1 python3-all_3.10.6-1 python3-distutils_3.10.8-1 python3-lib2to3_3.10.8-1 python3-minimal_3.10.6-1 python3-pkg-resources_65.5.0-1 python3-setuptools_65.5.0-1 python3.10_3.10.8-3 python3.10-minimal_3.10.8-3 rake_13.0.6-3 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.2 rpcsvc-proto_1.4.2-4 ruby_1:3.0+3.1 ruby-net-telnet_0.1.1-2.1 ruby-rubygems_3.3.15-1 ruby-sdbm_1.0.0-5 ruby-webrick_1.7.0-4 ruby-xmlrpc_0.3.2-2 ruby3.0_3.0.4-8 rubygems-integration_1.18 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-genometools-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sgml-data_2.0.11+nmu1 sysvinit-utils_3.05-6 t1utils_1.41-4 tar_1.34+dfsg-1 tex-common_6.18 texlive-base_2022.20220923-2 texlive-binaries_2022.20220321.62855-4+b1 texlive-fonts-extra_2022.20220923-3 texlive-fonts-recommended_2022.20220923-2 texlive-latex-base_2022.20220923-2 texlive-latex-extra_2022.20220923-3 texlive-latex-recommended_2022.20220923-2 texlive-pictures_2022.20220923-2 tzdata_2022d-1 ucf_3.0043 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 uuid-dev_2.38.1-4 x11-common_1:7.7+23 x11proto-core-dev_2022.1-1 x11proto-dev_2022.1-1 xdg-utils_1.1.3-4.1 xml-core_0.18+nmu1 xorg-sgml-doctools_1:1.11-1.1 xsltproc_1.1.35-1 xtrans-dev_1.4.0-1 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1 zlib1g-dev_1:1.2.11.dfsg-4.1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.nwuw3hBg/trustedkeys.kbx': General error
gpgv: Signature made Mon Nov 28 15:04:32 2022 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./genometools_1.6.2+ds-3.dsc
dpkg-source: info: extracting genometools in /<<BUILDDIR>>/genometools-1.6.2+ds
dpkg-source: info: unpacking genometools_1.6.2+ds.orig.tar.xz
dpkg-source: info: unpacking genometools_1.6.2+ds-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying reproducible
dpkg-source: info: applying adding_soname
dpkg-source: info: applying libbam-fix
dpkg-source: info: applying remove-gitignores
dpkg-source: info: applying fix-exports
dpkg-source: info: applying split-manuals
dpkg-source: info: applying use-mx32
dpkg-source: info: applying gtdoc-traverse-sorted
dpkg-source: info: applying ignore-m32-m64.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-21138af3-6104-4ad0-9754-16024f27bfdb
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package genometools
dpkg-buildpackage: info: source version 1.6.2+ds-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds'
mkdir -p obj
/usr/bin/make cleanup
make[2]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds'
rm -rf lib
find obj -name '*.o' -delete
rm -f obj/amalgamation.c
rm -rf testsuite/stest_testsuite testsuite/stest_stest_tests
/usr/bin/make -s -C ./doc/devguide clean
make[3]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/devguide'
make[3]: Leaving directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/devguide'
/usr/bin/make -s -C ./doc/manuals clean
make[3]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/manuals'
make[3]: Leaving directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/manuals'
rm -f doc/manuals/api_reference.tex \
          doc/manuals/gtscript_reference.tex
find doc . -name "*.toc" -delete
rm -f www/genometools.org/htdocs/images/callbacks.png \
          www/genometools.org/htdocs/images/parsed.png    \
          www/genometools.org/htdocs/images/constructed.png \
          doc/manuals/annotationsketch.pdf
rm -f www/genometools.org/htdocs/examples.html
rm -rf doc/manpages
find testdata \( -name '*.esq' -o -name '*.sds' -o -name '*.ssp' \
	 -o -name '*.ois' -o -name '*.al1' \)  \
   -a ! \( -name 'foo.[36][24].*' \) -delete
find obj -name '*.splint' -delete
find obj -name '*.check' -delete
find obj -name '*.sb' -delete
rm -rf bin obj
rm -rf gtpython/build
/usr/bin/make -s -C ./doc/manuals cleanup
make[3]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/manuals'
make[3]: Leaving directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/manuals'
make[2]: Leaving directory '/<<BUILDDIR>>/genometools-1.6.2+ds'
cd doc/manuals; /usr/bin/make cleanup
make[2]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/manuals'
rm -f *.aux  *.log *.bbl  *.blg *.dvi *.mer *.mct *.mbd comment.cut
rm -f *.out *.toc
rm -f U89959.fna read[12].fna 
rm -f reads.al1 reads.esq reads.lcp reads.llv reads.prj reads.suf
rm -f tallymer-tmp.tex
rm -f tagerator-tmp.tex Q1.gz pck-human.*
rm -f readjoiner.pdf hop.pdf ltrharvest.pdf ltrdigest.pdf uniquesub.pdf matstat.pdf mgth.pdf packedindex.pdf repfind.pdf tallymer.pdf tagerator.pdf genomediff.pdf
make[2]: Leaving directory '/<<BUILDDIR>>/genometools-1.6.2+ds/doc/manuals'
# should be deleted inside doc/manuals/Makefile
rm -f doc/manuals/annotationsketch.out \
      doc/manuals/api_reference.tex    \
      doc/manuals/gtscript_reference.tex
find doc . -name "*.toc" -delete
find testdata \( -name '*.ois' -or -name '*.sds' -or -name '*.esq' -or \
      -name '*.ssp' -or -name '*.des' -or -name "*.md5"  \) -and \( -not \
      -name '*foo.32.*' -not -name '*foo.64.*' \) -delete
rm -f www/genometools.org/htdocs/images/callbacks.png \
      www/genometools.org/htdocs/images/parsed.png    \
      www/genometools.org/htdocs/images/constructed.png \
      doc/manuals/annotationsketch.pdf
rm -f www/genometools.org/htdocs/examples.html \
      www/genometools.org/htdocs/libgenometools.html
rm -rf gtpython/build
rm -rf obj
make[1]: Leaving directory '/<<BUILDDIR>>/genometools-1.6.2+ds'
   dh_clean
 debian/rules binary-arch
dh binary-arch --with python3
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds'
cp debian/doc-imgs/*png www/genometools.org/htdocs/images
dh_auto_build -- verbose=yes useshared=yes x32=no 64bit=no errorcheck=no all docs manuals
	make -j4 "INSTALL=install --strip-program=true" verbose=yes useshared=yes x32=no 64bit=no errorcheck=no all docs manuals
make[2]: Entering directory '/<<BUILDDIR>>/genometools-1.6.2+ds'
echo '[create obj/gt_config.h]'
[create obj/gt_config.h]
test -d obj || mkdir -p obj
test -d obj/src/core || mkdir -p obj/src/core
test -d obj/src/core || mkdir -p obj/src/core
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/array.c -o obj/src/core/array.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
(echo '#ifndef GT_CONFIG_H' ;\
echo '#define GT_CONFIG_H' ;\
echo '#define GT_CC "'`cc --version | head -n 1`\" ;\
echo '#define GT_CFLAGS "-g -O2 -ffile-prefix-map=.=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3"' ;\
echo '-Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include ' | \
sed -e 's/\([^\]\)"/\1\\"/g' -e 's/^"/\\"/g' -e 's/$/"/' \
    -e 's/^/#define GT_CPPFLAGS "/'; \
  echo '#define GT_VERSION "'`cat VERSION`\" ) > obj/gt_config.h
cc -c src/core/alphabet.c -o obj/src/core/alphabet.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/array2dim.c -o obj/src/core/array2dim.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cat VERSION | \
          sed 's/\([0-9]*\)\.[0-9]*\.[0-9]*/#define GT_MAJOR_VERSION \1/' >> obj/gt_config.h
cat VERSION | \
          sed 's/[0-9]*\.\([0-9]*\)\.[0-9]*/#define GT_MINOR_VERSION \1/' >> obj/gt_config.h
cat VERSION | \
          sed 's/[0-9]*\.[0-9]*\.\([0-9]*\)/#define GT_MICRO_VERSION \1/' >> obj/gt_config.h
echo '#endif' >> obj/gt_config.h
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/array2dim_sparse.c -o obj/src/core/array2dim_sparse.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/array2dim.c -o obj/src/core/array2dim.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/array2dim.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/array3dim.c -o obj/src/core/array3dim.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/array2dim_sparse.c -o obj/src/core/array2dim_sparse.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/array2dim_sparse.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/basename.c -o obj/src/core/basename.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/array3dim.c -o obj/src/core/array3dim.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/array3dim.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bioseq.c -o obj/src/core/bioseq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/basename.c -o obj/src/core/basename.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/basename.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bioseq_col.c -o obj/src/core/bioseq_col.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/array.c -o obj/src/core/array.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/array.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bioseq_iterator.c -o obj/src/core/bioseq_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bioseq_col.c -o obj/src/core/bioseq_col.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bioseq_col.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bitbuffer.c -o obj/src/core/bitbuffer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bioseq_iterator.c -o obj/src/core/bioseq_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bioseq_iterator.o
cc -c src/core/alphabet.c -o obj/src/core/alphabet.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/alphabet.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bitpackstringop.c -o obj/src/core/bitpackstringop.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bitpackstringop16.c -o obj/src/core/bitpackstringop16.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bioseq.c -o obj/src/core/bioseq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bioseq.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bitpackstringop32.c -o obj/src/core/bitpackstringop32.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bitbuffer.c -o obj/src/core/bitbuffer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bitbuffer.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bitpackstringop64.c -o obj/src/core/bitpackstringop64.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bitpackstringop.c -o obj/src/core/bitpackstringop.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bitpackstringop.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bitpackstringop8.c -o obj/src/core/bitpackstringop8.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bitpackstringop16.c -o obj/src/core/bitpackstringop16.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bitpackstringop16.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bittab.c -o obj/src/core/bittab.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bitpackstringop32.c -o obj/src/core/bitpackstringop32.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bitpackstringop32.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bool_matrix.c -o obj/src/core/bool_matrix.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bool_matrix.c -o obj/src/core/bool_matrix.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bool_matrix.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/bsearch.c -o obj/src/core/bsearch.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bitpackstringop64.c -o obj/src/core/bitpackstringop64.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bitpackstringop64.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/byte_popcount.c -o obj/src/core/byte_popcount.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/byte_popcount.c -o obj/src/core/byte_popcount.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/byte_popcount.o
cc -c src/core/bitpackstringop8.c -o obj/src/core/bitpackstringop8.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bitpackstringop8.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/byte_select.c -o obj/src/core/byte_select.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackarray.c -o obj/src/core/checkbitpackarray.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/byte_select.c -o obj/src/core/byte_select.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/byte_select.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackstring-int.c -o obj/src/core/checkbitpackstring-int.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bittab.c -o obj/src/core/bittab.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bittab.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackstring.c -o obj/src/core/checkbitpackstring.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/bsearch.c -o obj/src/core/bsearch.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/bsearch.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackstring16.c -o obj/src/core/checkbitpackstring16.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/checkbitpackstring.c -o obj/src/core/checkbitpackstring.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackstring.o
cc -c src/core/checkbitpackarray.c -o obj/src/core/checkbitpackarray.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackarray.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackstring32.c -o obj/src/core/checkbitpackstring32.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackstring64.c -o obj/src/core/checkbitpackstring64.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/checkbitpackstring-int.c -o obj/src/core/checkbitpackstring-int.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackstring-int.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/checkbitpackstring8.c -o obj/src/core/checkbitpackstring8.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/checkbitpackstring16.c -o obj/src/core/checkbitpackstring16.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackstring16.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/class_alloc.c -o obj/src/core/class_alloc.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/class_alloc.c -o obj/src/core/class_alloc.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/class_alloc.o
cc -c src/core/checkbitpackstring32.c -o obj/src/core/checkbitpackstring32.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackstring32.o
cc -c src/core/checkbitpackstring64.c -o obj/src/core/checkbitpackstring64.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackstring64.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/class_alloc_lock.c -o obj/src/core/class_alloc_lock.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/codon_iterator.c -o obj/src/core/codon_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/codon_iterator_encseq.c -o obj/src/core/codon_iterator_encseq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/class_alloc_lock.c -o obj/src/core/class_alloc_lock.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/class_alloc_lock.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/codon_iterator_simple.c -o obj/src/core/codon_iterator_simple.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/codon_iterator.c -o obj/src/core/codon_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/codon_iterator.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/colorspace.c -o obj/src/core/colorspace.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/codon_iterator_simple.c -o obj/src/core/codon_iterator_simple.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/codon_iterator_simple.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/combinatorics.c -o obj/src/core/combinatorics.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/codon_iterator_encseq.c -o obj/src/core/codon_iterator_encseq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/codon_iterator_encseq.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/compact_ulong_store.c -o obj/src/core/compact_ulong_store.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/colorspace.c -o obj/src/core/colorspace.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/colorspace.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/compat.c -o obj/src/core/compat.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/compat.c -o obj/src/core/compat.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/compat.o
cc -c src/core/combinatorics.c -o obj/src/core/combinatorics.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/combinatorics.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/complement.c -o obj/src/core/complement.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/countingsort.c -o obj/src/core/countingsort.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/compact_ulong_store.c -o obj/src/core/compact_ulong_store.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/compact_ulong_store.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/cstr.c -o obj/src/core/cstr.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/complement.c -o obj/src/core/complement.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/complement.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/cstr_array.c -o obj/src/core/cstr_array.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/countingsort.c -o obj/src/core/countingsort.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/countingsort.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/cstr_table.c -o obj/src/core/cstr_table.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/cstr_array.c -o obj/src/core/cstr_array.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/cstr_array.o
cc -c src/core/cstr.c -o obj/src/core/cstr.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/cstr.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/csvline_reader.c -o obj/src/core/csvline_reader.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/desc_buffer.c -o obj/src/core/desc_buffer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/checkbitpackstring8.c -o obj/src/core/checkbitpackstring8.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/checkbitpackstring8.o
cc -c src/core/cstr_table.c -o obj/src/core/cstr_table.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/cstr_table.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/disc_distri.c -o obj/src/core/disc_distri.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/dlist.c -o obj/src/core/dlist.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/desc_buffer.c -o obj/src/core/desc_buffer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/desc_buffer.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/dual-pivot-qsort.c -o obj/src/core/dual-pivot-qsort.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/csvline_reader.c -o obj/src/core/csvline_reader.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/csvline_reader.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/dyn_bittab.c -o obj/src/core/dyn_bittab.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/disc_distri.c -o obj/src/core/disc_distri.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/disc_distri.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/dynalloc.c -o obj/src/core/dynalloc.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/dynalloc.c -o obj/src/core/dynalloc.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/dynalloc.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/eansi.c -o obj/src/core/eansi.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/eansi.c -o obj/src/core/eansi.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/eansi.o
cc -c src/core/dual-pivot-qsort.c -o obj/src/core/dual-pivot-qsort.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/dual-pivot-qsort.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/ebzlib.c -o obj/src/core/ebzlib.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/encseq.c -o obj/src/core/encseq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/dyn_bittab.c -o obj/src/core/dyn_bittab.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/dyn_bittab.o
cc -c src/core/dlist.c -o obj/src/core/dlist.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/dlist.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/encseq_access_type.c -o obj/src/core/encseq_access_type.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/encseq_col.c -o obj/src/core/encseq_col.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/ebzlib.c -o obj/src/core/ebzlib.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/ebzlib.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/encseq_metadata.c -o obj/src/core/encseq_metadata.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/encseq_access_type.c -o obj/src/core/encseq_access_type.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/encseq_access_type.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/encseq_options.c -o obj/src/core/encseq_options.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/encseq_metadata.c -o obj/src/core/encseq_metadata.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/encseq_metadata.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/encseq_ptr.c -o obj/src/core/encseq_ptr.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/encseq_col.c -o obj/src/core/encseq_col.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/encseq_col.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/endianess.c -o obj/src/core/endianess.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/endianess.c -o obj/src/core/endianess.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/endianess.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/error.c -o obj/src/core/error.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/encseq_ptr.c -o obj/src/core/encseq_ptr.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/encseq_ptr.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/example.c -o obj/src/core/example.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/error.c -o obj/src/core/error.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/error.o
cc -c src/core/example.c -o obj/src/core/example.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/example.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/example_a.c -o obj/src/core/example_a.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/example_b.c -o obj/src/core/example_b.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/example_a.c -o obj/src/core/example_a.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/example_a.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/ezlib.c -o obj/src/core/ezlib.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/example_b.c -o obj/src/core/example_b.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/example_b.o
cc -c src/core/encseq_options.c -o obj/src/core/encseq_options.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/encseq_options.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fa.c -o obj/src/core/fa.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fasta.c -o obj/src/core/fasta.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/ezlib.c -o obj/src/core/ezlib.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/ezlib.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fasta_reader.c -o obj/src/core/fasta_reader.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fasta_reader.c -o obj/src/core/fasta_reader.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fasta_reader.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fasta_reader_fsm.c -o obj/src/core/fasta_reader_fsm.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fasta.c -o obj/src/core/fasta.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fasta.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fasta_reader_rec.c -o obj/src/core/fasta_reader_rec.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fasta_reader_fsm.c -o obj/src/core/fasta_reader_fsm.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fasta_reader_fsm.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fasta_reader_seqit.c -o obj/src/core/fasta_reader_seqit.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fasta_reader_rec.c -o obj/src/core/fasta_reader_rec.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fasta_reader_rec.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fastq.c -o obj/src/core/fastq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fasta_reader_seqit.c -o obj/src/core/fasta_reader_seqit.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fasta_reader_seqit.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/file.c -o obj/src/core/file.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fastq.c -o obj/src/core/fastq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fastq.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/fileutils.c -o obj/src/core/fileutils.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fa.c -o obj/src/core/fa.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fa.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/gc_content.c -o obj/src/core/gc_content.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/file.c -o obj/src/core/file.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/file.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/grep.c -o obj/src/core/grep.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/fileutils.c -o obj/src/core/fileutils.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/fileutils.o
cc -c src/core/gc_content.c -o obj/src/core/gc_content.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/gc_content.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/gtdatapath.c -o obj/src/core/gtdatapath.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/hashmap.c -o obj/src/core/hashmap.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/gtdatapath.c -o obj/src/core/gtdatapath.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/gtdatapath.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/hashtable.c -o obj/src/core/hashtable.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/hashmap.c -o obj/src/core/hashmap.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/hashmap.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/init.c -o obj/src/core/init.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/grep.c -o obj/src/core/grep.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/grep.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/interval_tree.c -o obj/src/core/interval_tree.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/init.c -o obj/src/core/init.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/init.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/io.c -o obj/src/core/io.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/io.c -o obj/src/core/io.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/io.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/log.c -o obj/src/core/log.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/log.c -o obj/src/core/log.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/log.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/logger.c -o obj/src/core/logger.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/hashtable.c -o obj/src/core/hashtable.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/hashtable.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/ma.c -o obj/src/core/ma.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/logger.c -o obj/src/core/logger.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/logger.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/mapspec.c -o obj/src/core/mapspec.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/ma.c -o obj/src/core/ma.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/ma.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/mathsupport.c -o obj/src/core/mathsupport.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/mapspec.c -o obj/src/core/mapspec.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/mapspec.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/md5_encoder.c -o obj/src/core/md5_encoder.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/interval_tree.c -o obj/src/core/interval_tree.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/interval_tree.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/md5_fingerprint.c -o obj/src/core/md5_fingerprint.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/mathsupport.c -o obj/src/core/mathsupport.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/mathsupport.o
cc -c src/core/md5_fingerprint.c -o obj/src/core/md5_fingerprint.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/md5_fingerprint.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/md5_seqid.c -o obj/src/core/md5_seqid.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/md5_tab.c -o obj/src/core/md5_tab.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/md5_seqid.c -o obj/src/core/md5_seqid.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/md5_seqid.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/msort.c -o obj/src/core/msort.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/md5_encoder.c -o obj/src/core/md5_encoder.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/md5_encoder.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/multithread.c -o obj/src/core/multithread.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/md5_tab.c -o obj/src/core/md5_tab.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/md5_tab.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/option.c -o obj/src/core/option.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/multithread.c -o obj/src/core/multithread.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/multithread.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/orf.c -o obj/src/core/orf.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/orf.c -o obj/src/core/orf.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/orf.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/output_file.c -o obj/src/core/output_file.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/output_file.c -o obj/src/core/output_file.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/output_file.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/parseutils.c -o obj/src/core/parseutils.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/msort.c -o obj/src/core/msort.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/msort.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/password_entry.c -o obj/src/core/password_entry.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/password_entry.c -o obj/src/core/password_entry.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/password_entry.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/phase.c -o obj/src/core/phase.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/phase.c -o obj/src/core/phase.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/phase.o
cc -c src/core/parseutils.c -o obj/src/core/parseutils.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/parseutils.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/process.c -o obj/src/core/process.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/progressbar.c -o obj/src/core/progressbar.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/process.c -o obj/src/core/process.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/process.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/qsort-ulong.c -o obj/src/core/qsort-ulong.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/progressbar.c -o obj/src/core/progressbar.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/progressbar.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/qsort_r.c -o obj/src/core/qsort_r.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/qsort-ulong.c -o obj/src/core/qsort-ulong.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/qsort-ulong.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/quality.c -o obj/src/core/quality.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/quality.c -o obj/src/core/quality.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/quality.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/queue.c -o obj/src/core/queue.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/option.c -o obj/src/core/option.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/option.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/radix_sort.c -o obj/src/core/radix_sort.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/qsort_r.c -o obj/src/core/qsort_r.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/qsort_r.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/range.c -o obj/src/core/range.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/queue.c -o obj/src/core/queue.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/queue.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/readmode.c -o obj/src/core/readmode.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/readmode.c -o obj/src/core/readmode.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/readmode.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/safearith.c -o obj/src/core/safearith.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/range.c -o obj/src/core/range.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/range.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/score_function.c -o obj/src/core/score_function.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/score_function.c -o obj/src/core/score_function.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/score_function.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/score_matrix.c -o obj/src/core/score_matrix.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/safearith.c -o obj/src/core/safearith.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/safearith.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/seq.c -o obj/src/core/seq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/seq.c -o obj/src/core/seq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/seq.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/seq_col.c -o obj/src/core/seq_col.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/score_matrix.c -o obj/src/core/score_matrix.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/score_matrix.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/seq_info_cache.c -o obj/src/core/seq_info_cache.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/seq_info_cache.c -o obj/src/core/seq_info_cache.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/seq_info_cache.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/seq_iterator.c -o obj/src/core/seq_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/seq_col.c -o obj/src/core/seq_col.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/seq_col.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/seq_iterator_fastq.c -o obj/src/core/seq_iterator_fastq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/seq_iterator.c -o obj/src/core/seq_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/seq_iterator.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/seq_iterator_sequence_buffer.c -o obj/src/core/seq_iterator_sequence_buffer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/seq_iterator_sequence_buffer.c -o obj/src/core/seq_iterator_sequence_buffer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/seq_iterator_sequence_buffer.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer.c -o obj/src/core/sequence_buffer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/seq_iterator_fastq.c -o obj/src/core/seq_iterator_fastq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/seq_iterator_fastq.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer_dust.c -o obj/src/core/sequence_buffer_dust.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/sequence_buffer.c -o obj/src/core/sequence_buffer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer_embl.c -o obj/src/core/sequence_buffer_embl.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/sequence_buffer_dust.c -o obj/src/core/sequence_buffer_dust.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer_dust.o
cc -c src/core/radix_sort.c -o obj/src/core/radix_sort.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/radix_sort.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer_fasta.c -o obj/src/core/sequence_buffer_fasta.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer_fastq.c -o obj/src/core/sequence_buffer_fastq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/sequence_buffer_fasta.c -o obj/src/core/sequence_buffer_fasta.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer_fasta.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer_gb.c -o obj/src/core/sequence_buffer_gb.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/sequence_buffer_fastq.c -o obj/src/core/sequence_buffer_fastq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer_fastq.o
cc -c src/core/sequence_buffer_embl.c -o obj/src/core/sequence_buffer_embl.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer_embl.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sequence_buffer_plain.c -o obj/src/core/sequence_buffer_plain.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/showtime.c -o obj/src/core/showtime.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/showtime.c -o obj/src/core/showtime.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/showtime.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/sig.c -o obj/src/core/sig.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/sequence_buffer_plain.c -o obj/src/core/sequence_buffer_plain.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer_plain.o
cc -c src/core/sig.c -o obj/src/core/sig.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sig.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/spacepeak.c -o obj/src/core/spacepeak.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/splitter.c -o obj/src/core/splitter.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/spacepeak.c -o obj/src/core/spacepeak.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/spacepeak.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/str.c -o obj/src/core/str.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/splitter.c -o obj/src/core/splitter.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/splitter.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/str_array.c -o obj/src/core/str_array.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/str.c -o obj/src/core/str.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/str.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/str_cache.c -o obj/src/core/str_cache.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/str_array.c -o obj/src/core/str_array.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/str_array.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/strand.c -o obj/src/core/strand.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/sequence_buffer_gb.c -o obj/src/core/sequence_buffer_gb.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/sequence_buffer_gb.o
cc -c src/core/str_cache.c -o obj/src/core/str_cache.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/str_cache.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/strcmp.c -o obj/src/core/strcmp.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/string_distri.c -o obj/src/core/string_distri.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/strand.c -o obj/src/core/strand.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/strand.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/symbol.c -o obj/src/core/symbol.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/strcmp.c -o obj/src/core/strcmp.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/strcmp.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/thread.c -o obj/src/core/thread.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/symbol.c -o obj/src/core/symbol.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/symbol.o
cc -c src/core/string_distri.c -o obj/src/core/string_distri.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/string_distri.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/timer.c -o obj/src/core/timer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/tokenizer.c -o obj/src/core/tokenizer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/thread.c -o obj/src/core/thread.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/thread.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/tool.c -o obj/src/core/tool.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/tokenizer.c -o obj/src/core/tokenizer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/tokenizer.o
cc -c src/core/tool.c -o obj/src/core/tool.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/tool.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/tool_iterator.c -o obj/src/core/tool_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/toolbox.c -o obj/src/core/toolbox.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/timer.c -o obj/src/core/timer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/timer.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/tooldriver.c -o obj/src/core/tooldriver.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/tool_iterator.c -o obj/src/core/tool_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/tool_iterator.o
cc -c src/core/tooldriver.c -o obj/src/core/tooldriver.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/tooldriver.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/trans_table.c -o obj/src/core/trans_table.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/translator.c -o obj/src/core/translator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/toolbox.c -o obj/src/core/toolbox.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/toolbox.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/unit_testing.c -o obj/src/core/unit_testing.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/unit_testing.c -o obj/src/core/unit_testing.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/unit_testing.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/version.c -o obj/src/core/version.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/version.c -o obj/src/core/version.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/version.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/versionfunc.c -o obj/src/core/versionfunc.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/versionfunc.c -o obj/src/core/versionfunc.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/versionfunc.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/warning.c -o obj/src/core/warning.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/translator.c -o obj/src/core/translator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/translator.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/xansi.c -o obj/src/core/xansi.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/warning.c -o obj/src/core/warning.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/warning.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/xbsd.c -o obj/src/core/xbsd.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/trans_table.c -o obj/src/core/trans_table.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/trans_table.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/xbzlib.c -o obj/src/core/xbzlib.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/xbsd.c -o obj/src/core/xbsd.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/xbsd.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/xposix.c -o obj/src/core/xposix.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/xansi.c -o obj/src/core/xansi.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/xansi.o
cc -c src/core/xbzlib.c -o obj/src/core/xbzlib.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/xbzlib.o
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/xzlib.c -o obj/src/core/xzlib.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/core || mkdir -p obj/src/core
cc -c src/core/yarandom.c -o obj/src/core/yarandom.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/yarandom.c -o obj/src/core/yarandom.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/yarandom.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/add_ids_stream.c -o obj/src/extended/add_ids_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/xposix.c -o obj/src/core/xposix.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/xposix.o
cc -c src/core/xzlib.c -o obj/src/core/xzlib.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/xzlib.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/add_ids_visitor.c -o obj/src/extended/add_ids_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/add_introns_stream.c -o obj/src/extended/add_introns_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/add_introns_stream.c -o obj/src/extended/add_introns_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/add_introns_stream.o
cc -c src/extended/add_ids_stream.c -o obj/src/extended/add_ids_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/add_ids_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/affinealign.c -o obj/src/extended/affinealign.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/aligned_segment.c -o obj/src/extended/aligned_segment.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/core/encseq.c -o obj/src/core/encseq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/core/encseq.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/aligned_segments_pile.c -o obj/src/extended/aligned_segments_pile.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/add_ids_visitor.c -o obj/src/extended/add_ids_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/add_ids_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/alignment.c -o obj/src/extended/alignment.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/aligned_segments_pile.c -o obj/src/extended/aligned_segments_pile.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/aligned_segments_pile.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/anno_db_gfflike.c -o obj/src/extended/anno_db_gfflike.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/aligned_segment.c -o obj/src/extended/aligned_segment.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/aligned_segment.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/anno_db_schema.c -o obj/src/extended/anno_db_schema.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/anno_db_schema.c -o obj/src/extended/anno_db_schema.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/anno_db_schema.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/array_in_stream.c -o obj/src/extended/array_in_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/affinealign.c -o obj/src/extended/affinealign.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/affinealign.o
cc -c src/extended/array_in_stream.c -o obj/src/extended/array_in_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/array_in_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/array_out_stream.c -o obj/src/extended/array_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/assembly_stats_calculator.c -o obj/src/extended/assembly_stats_calculator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/array_out_stream.c -o obj/src/extended/array_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/array_out_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/bed_in_stream.c -o obj/src/extended/bed_in_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/bed_in_stream.c -o obj/src/extended/bed_in_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/bed_in_stream.o
cc -c src/extended/assembly_stats_calculator.c -o obj/src/extended/assembly_stats_calculator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/assembly_stats_calculator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/bed_parser.c -o obj/src/extended/bed_parser.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/alignment.c -o obj/src/extended/alignment.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/alignment.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/bitinstream.c -o obj/src/extended/bitinstream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/bitoutstream.c -o obj/src/extended/bitoutstream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/bitinstream.c -o obj/src/extended/bitinstream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/bitinstream.o
cc -c src/extended/bitoutstream.c -o obj/src/extended/bitoutstream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/bitoutstream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/blast_process_call.c -o obj/src/extended/blast_process_call.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/buffer_stream.c -o obj/src/extended/buffer_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/buffer_stream.c -o obj/src/extended/buffer_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/buffer_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/cds_check_stream.c -o obj/src/extended/cds_check_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/cds_check_stream.c -o obj/src/extended/cds_check_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/cds_check_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/cds_check_visitor.c -o obj/src/extended/cds_check_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/blast_process_call.c -o obj/src/extended/blast_process_call.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/blast_process_call.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/cds_stream.c -o obj/src/extended/cds_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/cds_stream.c -o obj/src/extended/cds_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/cds_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/cds_visitor.c -o obj/src/extended/cds_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/bed_parser.c -o obj/src/extended/bed_parser.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/bed_parser.o
cc -c src/extended/anno_db_gfflike.c -o obj/src/extended/anno_db_gfflike.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/anno_db_gfflike.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/chain.c -o obj/src/extended/chain.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/check_boundaries_visitor.c -o obj/src/extended/check_boundaries_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/cds_check_visitor.c -o obj/src/extended/cds_check_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/cds_check_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/chseqids_stream.c -o obj/src/extended/chseqids_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/check_boundaries_visitor.c -o obj/src/extended/check_boundaries_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/check_boundaries_visitor.o
cc -c src/extended/chain.c -o obj/src/extended/chain.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/chain.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/clustered_set.c -o obj/src/extended/clustered_set.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/clustered_set_uf.c -o obj/src/extended/clustered_set_uf.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/clustered_set.c -o obj/src/extended/clustered_set.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/clustered_set.o
cc -c src/extended/chseqids_stream.c -o obj/src/extended/chseqids_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/chseqids_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/coin_hmm.c -o obj/src/extended/coin_hmm.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/collect_ids_visitor.c -o obj/src/extended/collect_ids_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/cds_visitor.c -o obj/src/extended/cds_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/cds_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/comment_node.c -o obj/src/extended/comment_node.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/coin_hmm.c -o obj/src/extended/coin_hmm.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/coin_hmm.o
cc -c src/extended/collect_ids_visitor.c -o obj/src/extended/collect_ids_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/collect_ids_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/compressed_bitsequence.c -o obj/src/extended/compressed_bitsequence.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/condenseq.c -o obj/src/extended/condenseq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/comment_node.c -o obj/src/extended/comment_node.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/comment_node.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/condenseq_creator.c -o obj/src/extended/condenseq_creator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/clustered_set_uf.c -o obj/src/extended/clustered_set_uf.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/clustered_set_uf.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/condenseq_search_arguments.c -o obj/src/extended/condenseq_search_arguments.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/condenseq_search_arguments.c -o obj/src/extended/condenseq_search_arguments.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/condenseq_search_arguments.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/consensus_sa.c -o obj/src/extended/consensus_sa.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/consensus_sa.c -o obj/src/extended/consensus_sa.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/consensus_sa.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/csa_gene.c -o obj/src/extended/csa_gene.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/csa_gene.c -o obj/src/extended/csa_gene.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/csa_gene.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/csa_splice_form.c -o obj/src/extended/csa_splice_form.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/csa_splice_form.c -o obj/src/extended/csa_splice_form.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/csa_splice_form.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/csa_stream.c -o obj/src/extended/csa_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/csa_stream.c -o obj/src/extended/csa_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/csa_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/csa_variable_strands.c -o obj/src/extended/csa_variable_strands.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/condenseq.c -o obj/src/extended/condenseq.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/condenseq.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/csa_visitor.c -o obj/src/extended/csa_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/compressed_bitsequence.c -o obj/src/extended/compressed_bitsequence.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/compressed_bitsequence.o
cc -c src/extended/csa_variable_strands.c -o obj/src/extended/csa_variable_strands.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/csa_variable_strands.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/cstr_iterator.c -o obj/src/extended/cstr_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/diagonalbandalign.c -o obj/src/extended/diagonalbandalign.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/cstr_iterator.c -o obj/src/extended/cstr_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/cstr_iterator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/diagonalbandalign_affinegapcost.c -o obj/src/extended/diagonalbandalign_affinegapcost.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/condenseq_creator.c -o obj/src/extended/condenseq_creator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/condenseq_creator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/dice_hmm.c -o obj/src/extended/dice_hmm.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/dice_hmm.c -o obj/src/extended/dice_hmm.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/dice_hmm.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/dot_out_stream.c -o obj/src/extended/dot_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/csa_visitor.c -o obj/src/extended/csa_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/csa_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/dot_visitor.c -o obj/src/extended/dot_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/dot_out_stream.c -o obj/src/extended/dot_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/dot_out_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/dup_feature_stream.c -o obj/src/extended/dup_feature_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/dup_feature_stream.c -o obj/src/extended/dup_feature_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/dup_feature_stream.o
cc -c src/extended/dot_visitor.c -o obj/src/extended/dot_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/dot_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/dup_feature_visitor.c -o obj/src/extended/dup_feature_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/editscript.c -o obj/src/extended/editscript.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/dup_feature_visitor.c -o obj/src/extended/dup_feature_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/dup_feature_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/elias_gamma.c -o obj/src/extended/elias_gamma.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/elias_gamma.c -o obj/src/extended/elias_gamma.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/elias_gamma.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/encdesc.c -o obj/src/extended/encdesc.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/diagonalbandalign.c -o obj/src/extended/diagonalbandalign.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/diagonalbandalign.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/encdesc_header_io.c -o obj/src/extended/encdesc_header_io.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/diagonalbandalign_affinegapcost.c -o obj/src/extended/diagonalbandalign_affinegapcost.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/diagonalbandalign_affinegapcost.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/eof_node.c -o obj/src/extended/eof_node.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/eof_node.c -o obj/src/extended/eof_node.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/eof_node.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/evaluator.c -o obj/src/extended/evaluator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/encdesc_header_io.c -o obj/src/extended/encdesc_header_io.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/encdesc_header_io.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/extract_feature_sequence.c -o obj/src/extended/extract_feature_sequence.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/evaluator.c -o obj/src/extended/evaluator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/evaluator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/extract_feature_stream.c -o obj/src/extended/extract_feature_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/extract_feature_sequence.c -o obj/src/extended/extract_feature_sequence.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/extract_feature_sequence.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/extract_feature_visitor.c -o obj/src/extended/extract_feature_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/extract_feature_stream.c -o obj/src/extended/extract_feature_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/extract_feature_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/fasta_header_iterator.c -o obj/src/extended/fasta_header_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/fasta_header_iterator.c -o obj/src/extended/fasta_header_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/fasta_header_iterator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_in_stream.c -o obj/src/extended/feature_in_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/extract_feature_visitor.c -o obj/src/extended/extract_feature_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/extract_feature_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_index.c -o obj/src/extended/feature_index.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_in_stream.c -o obj/src/extended/feature_in_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_in_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_index_memory.c -o obj/src/extended/feature_index_memory.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/encdesc.c -o obj/src/extended/encdesc.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/encdesc.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_info.c -o obj/src/extended/feature_info.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_index_memory.c -o obj/src/extended/feature_index_memory.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_index_memory.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_node.c -o obj/src/extended/feature_node.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_index.c -o obj/src/extended/feature_index.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_index.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_node_iterator.c -o obj/src/extended/feature_node_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_info.c -o obj/src/extended/feature_info.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_info.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_node_observer.c -o obj/src/extended/feature_node_observer.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_node_observer.c -o obj/src/extended/feature_node_observer.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_node_observer.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_out_stream.c -o obj/src/extended/feature_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/editscript.c -o obj/src/extended/editscript.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/editscript.o
cc -c src/extended/feature_node_iterator.c -o obj/src/extended/feature_node_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_node_iterator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_stream.c -o obj/src/extended/feature_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_out_stream.c -o obj/src/extended/feature_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_out_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/feature_visitor.c -o obj/src/extended/feature_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gap_str.c -o obj/src/extended/gap_str.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_stream.c -o obj/src/extended/feature_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/genome_node.c -o obj/src/extended/genome_node.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_visitor.c -o obj/src/extended/feature_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_escaping.c -o obj/src/extended/gff3_escaping.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gap_str.c -o obj/src/extended/gap_str.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gap_str.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_in_stream.c -o obj/src/extended/gff3_in_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_escaping.c -o obj/src/extended/gff3_escaping.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_escaping.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_in_stream_plain.c -o obj/src/extended/gff3_in_stream_plain.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_in_stream.c -o obj/src/extended/gff3_in_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_in_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_linesorted_out_stream.c -o obj/src/extended/gff3_linesorted_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/genome_node.c -o obj/src/extended/genome_node.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/genome_node.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_numsorted_out_stream.c -o obj/src/extended/gff3_numsorted_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_in_stream_plain.c -o obj/src/extended/gff3_in_stream_plain.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_in_stream_plain.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_out_stream.c -o obj/src/extended/gff3_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_numsorted_out_stream.c -o obj/src/extended/gff3_numsorted_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_numsorted_out_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_output.c -o obj/src/extended/gff3_output.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_linesorted_out_stream.c -o obj/src/extended/gff3_linesorted_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_linesorted_out_stream.o
cc -c src/extended/gff3_out_stream.c -o obj/src/extended/gff3_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_out_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_parser.c -o obj/src/extended/gff3_parser.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gff3_visitor.c -o obj/src/extended/gff3_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_output.c -o obj/src/extended/gff3_output.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_output.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/globalchaining.c -o obj/src/extended/globalchaining.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/feature_node.c -o obj/src/extended/feature_node.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/feature_node.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/golomb.c -o obj/src/extended/golomb.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/globalchaining.c -o obj/src/extended/globalchaining.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/globalchaining.o
cc -c src/extended/golomb.c -o obj/src/extended/golomb.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/golomb.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gtdatahelp.c -o obj/src/extended/gtdatahelp.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gtf_in_stream.c -o obj/src/extended/gtf_in_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gff3_visitor.c -o obj/src/extended/gff3_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gtf_out_stream.c -o obj/src/extended/gtf_out_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gtf_out_stream.c -o obj/src/extended/gtf_out_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gtf_out_stream.o
cc -c src/extended/gtdatahelp.c -o obj/src/extended/gtdatahelp.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gtdatahelp.o
cc -c src/extended/gtf_in_stream.c -o obj/src/extended/gtf_in_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gtf_in_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gtf_parser.c -o obj/src/extended/gtf_parser.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/gtf_visitor.c -o obj/src/extended/gtf_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/hcr.c -o obj/src/extended/hcr.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gtf_visitor.c -o obj/src/extended/gtf_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gtf_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/hmm.c -o obj/src/extended/hmm.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/gtf_parser.c -o obj/src/extended/gtf_parser.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gtf_parser.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/hpol_processor.c -o obj/src/extended/hpol_processor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/hmm.c -o obj/src/extended/hmm.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/hmm.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/huffcode.c -o obj/src/extended/huffcode.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/hcr.c -o obj/src/extended/hcr.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/hcr.o
cc -c src/extended/gff3_parser.c -o obj/src/extended/gff3_parser.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/gff3_parser.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/id_to_md5_stream.c -o obj/src/extended/id_to_md5_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/id_to_md5_visitor.c -o obj/src/extended/id_to_md5_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/id_to_md5_stream.c -o obj/src/extended/id_to_md5_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/id_to_md5_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/inter_feature_stream.c -o obj/src/extended/inter_feature_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/inter_feature_stream.c -o obj/src/extended/inter_feature_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/inter_feature_stream.o
cc -c src/extended/hpol_processor.c -o obj/src/extended/hpol_processor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/hpol_processor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/inter_feature_visitor.c -o obj/src/extended/inter_feature_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/intset.c -o obj/src/extended/intset.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/id_to_md5_visitor.c -o obj/src/extended/id_to_md5_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/id_to_md5_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/intset_16.c -o obj/src/extended/intset_16.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/inter_feature_visitor.c -o obj/src/extended/inter_feature_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/inter_feature_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/intset_32.c -o obj/src/extended/intset_32.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/intset.c -o obj/src/extended/intset.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/intset.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/intset_8.c -o obj/src/extended/intset_8.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/huffcode.c -o obj/src/extended/huffcode.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/huffcode.o
cc -c src/extended/intset_32.c -o obj/src/extended/intset_32.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/intset_32.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/intset_combined.c -o obj/src/extended/intset_combined.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/io_function_pointers.c -o obj/src/extended/io_function_pointers.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/intset_16.c -o obj/src/extended/intset_16.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/intset_16.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/kmer_database.c -o obj/src/extended/kmer_database.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/intset_8.c -o obj/src/extended/intset_8.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/intset_8.o
cc -c src/extended/io_function_pointers.c -o obj/src/extended/io_function_pointers.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/io_function_pointers.o
test -d obj/src/extended || mkdir -p obj/src/extended
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/linearalign.c -o obj/src/extended/linearalign.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/linearalign_affinegapcost.c -o obj/src/extended/linearalign_affinegapcost.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/intset_combined.c -o obj/src/extended/intset_combined.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/intset_combined.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/linspace_management.c -o obj/src/extended/linspace_management.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/linspace_management.c -o obj/src/extended/linspace_management.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/linspace_management.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/load_stream.c -o obj/src/extended/load_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/load_stream.c -o obj/src/extended/load_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/load_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/luahelper.c -o obj/src/extended/luahelper.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/linearalign.c -o obj/src/extended/linearalign.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/linearalign.o
cc -c src/extended/luahelper.c -o obj/src/extended/luahelper.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/luahelper.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/luaserialize.c -o obj/src/extended/luaserialize.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/mapping.c -o obj/src/extended/mapping.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/linearalign_affinegapcost.c -o obj/src/extended/linearalign_affinegapcost.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/linearalign_affinegapcost.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match.c -o obj/src/extended/match.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/mapping.c -o obj/src/extended/mapping.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/mapping.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_blast.c -o obj/src/extended/match_blast.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match.c -o obj/src/extended/match.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_iterator.c -o obj/src/extended/match_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match_blast.c -o obj/src/extended/match_blast.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_blast.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_iterator_blast.c -o obj/src/extended/match_iterator_blast.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/kmer_database.c -o obj/src/extended/kmer_database.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/kmer_database.o
cc -c src/extended/match_iterator.c -o obj/src/extended/match_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_iterator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_iterator_last.c -o obj/src/extended/match_iterator_last.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_iterator_open.c -o obj/src/extended/match_iterator_open.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/luaserialize.c -o obj/src/extended/luaserialize.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/luaserialize.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_iterator_sw.c -o obj/src/extended/match_iterator_sw.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match_iterator_open.c -o obj/src/extended/match_iterator_open.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_iterator_open.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_last.c -o obj/src/extended/match_last.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match_iterator_blast.c -o obj/src/extended/match_iterator_blast.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_iterator_blast.o
cc -c src/extended/match_iterator_sw.c -o obj/src/extended/match_iterator_sw.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_iterator_sw.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_open.c -o obj/src/extended/match_open.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match_last.c -o obj/src/extended/match_last.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_last.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_sw.c -o obj/src/extended/match_sw.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/match_visitor.c -o obj/src/extended/match_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match_open.c -o obj/src/extended/match_open.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_open.o
cc -c src/extended/match_sw.c -o obj/src/extended/match_sw.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_sw.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/maxcoordvalue.c -o obj/src/extended/maxcoordvalue.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/md5_to_id_stream.c -o obj/src/extended/md5_to_id_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/match_visitor.c -o obj/src/extended/match_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/md5_to_id_visitor.c -o obj/src/extended/md5_to_id_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/md5_to_id_stream.c -o obj/src/extended/md5_to_id_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/md5_to_id_stream.o
cc -c src/extended/match_iterator_last.c -o obj/src/extended/match_iterator_last.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/match_iterator_last.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/md5set.c -o obj/src/extended/md5set.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/merge_feature_stream.c -o obj/src/extended/merge_feature_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/maxcoordvalue.c -o obj/src/extended/maxcoordvalue.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/maxcoordvalue.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/merge_feature_visitor.c -o obj/src/extended/merge_feature_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/merge_feature_stream.c -o obj/src/extended/merge_feature_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/merge_feature_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/merge_stream.c -o obj/src/extended/merge_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/md5_to_id_visitor.c -o obj/src/extended/md5_to_id_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/md5_to_id_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/meta_node.c -o obj/src/extended/meta_node.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/merge_feature_visitor.c -o obj/src/extended/merge_feature_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/merge_feature_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/multi_sanitizer_visitor.c -o obj/src/extended/multi_sanitizer_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/meta_node.c -o obj/src/extended/meta_node.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/meta_node.o
cc -c src/extended/merge_stream.c -o obj/src/extended/merge_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/merge_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/multieoplist.c -o obj/src/extended/multieoplist.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/mutate.c -o obj/src/extended/mutate.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/md5set.c -o obj/src/extended/md5set.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/md5set.o
cc -c src/extended/multi_sanitizer_visitor.c -o obj/src/extended/multi_sanitizer_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/multi_sanitizer_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/node_stream.c -o obj/src/extended/node_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/node_visitor.c -o obj/src/extended/node_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/mutate.c -o obj/src/extended/mutate.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/mutate.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/obo_parse_tree.c -o obj/src/extended/obo_parse_tree.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/node_stream.c -o obj/src/extended/node_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/node_stream.o
cc -c src/extended/node_visitor.c -o obj/src/extended/node_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/node_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/obo_stanza.c -o obj/src/extended/obo_stanza.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/orf_finder_stream.c -o obj/src/extended/orf_finder_stream.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/obo_stanza.c -o obj/src/extended/obo_stanza.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/obo_stanza.o
cc -c src/extended/orf_finder_stream.c -o obj/src/extended/orf_finder_stream.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/orf_finder_stream.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/orf_finder_visitor.c -o obj/src/extended/orf_finder_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/orf_iterator.c -o obj/src/extended/orf_iterator.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/orf_iterator.c -o obj/src/extended/orf_iterator.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/orf_iterator.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/orphanage.c -o obj/src/extended/orphanage.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/multieoplist.c -o obj/src/extended/multieoplist.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/multieoplist.o
cc -c src/extended/orphanage.c -o obj/src/extended/orphanage.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/orphanage.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/permute_words.c -o obj/src/extended/permute_words.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/popcount_tab.c -o obj/src/extended/popcount_tab.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/orf_finder_visitor.c -o obj/src/extended/orf_finder_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/orf_finder_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/priority_queue.c -o obj/src/extended/priority_queue.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/obo_parse_tree.c -o obj/src/extended/obo_parse_tree.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/obo_parse_tree.o
cc -c src/extended/permute_words.c -o obj/src/extended/permute_words.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/permute_words.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/ranked_list.c -o obj/src/extended/ranked_list.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/rbtree.c -o obj/src/extended/rbtree.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/priority_queue.c -o obj/src/extended/priority_queue.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/priority_queue.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/rcr.c -o obj/src/extended/rcr.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/ranked_list.c -o obj/src/extended/ranked_list.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/ranked_list.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/rdb.c -o obj/src/extended/rdb.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/popcount_tab.c -o obj/src/extended/popcount_tab.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/popcount_tab.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/rdb_sqlite.c -o obj/src/extended/rdb_sqlite.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/rdb.c -o obj/src/extended/rdb.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/rdb.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/rdb_visitor.c -o obj/src/extended/rdb_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/rdb_visitor.c -o obj/src/extended/rdb_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/rdb_visitor.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/reconstructalignment.c -o obj/src/extended/reconstructalignment.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/rdb_sqlite.c -o obj/src/extended/rdb_sqlite.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/rdb_sqlite.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/region_mapping.c -o obj/src/extended/region_mapping.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/reconstructalignment.c -o obj/src/extended/reconstructalignment.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/reconstructalignment.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/region_node.c -o obj/src/extended/region_node.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/region_node.c -o obj/src/extended/region_node.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/region_node.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/region_node_builder.c -o obj/src/extended/region_node_builder.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/region_node_builder.c -o obj/src/extended/region_node_builder.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/region_node_builder.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/regioncov_visitor.c -o obj/src/extended/regioncov_visitor.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/region_mapping.c -o obj/src/extended/region_mapping.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/region_mapping.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/regular_seqid.c -o obj/src/extended/regular_seqid.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/regioncov_visitor.c -o obj/src/extended/regioncov_visitor.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/regioncov_visitor.o
cc -c src/extended/regular_seqid.c -o obj/src/extended/regular_seqid.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/regular_seqid.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/reverse.c -o obj/src/extended/reverse.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/rmq.c -o obj/src/extended/rmq.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -pipe -fPIC -Wpointer-arith -Wno-unknown-pragmas -O3 
cc -c src/extended/reverse.c -o obj/src/extended/reverse.d -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/genometools-1.6.2+ds=. -fstack-protector-strong -Wformat -Werror=format-security  -MM -MP -MT obj/src/extended/reverse.o
test -d obj/src/extended || mkdir -p obj/src/extended
cc -c src/extended/safe_popen.c -o obj/src/extended/safe_popen.o -Wdate-time -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_MEMMOVE -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DLUA_DL_DLOPEN -DLUA_USE_MKSTEMP -DGT_THREADS_ENABLED -DHAVE_SQLITE -I./src -I./obj   -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -I/usr/include/lua5.1  -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/uuid -I/usr/include/cairo -I/usr/include/pixman-1  -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/uuid  -I/usr/include/pango-1.0 -I/usr/include/glib-2.0