gbrowse →
2.54+dfsg-3+b1 →
armhf → 2014-09-01 07:50:30
sbuild (Debian sbuild) 0.64.1 (13 Oct 2013) on testbuildd.raspbian.org
╔══════════════════════════════════════════════════════════════════════════════╗
║ gbrowse 2.54+dfsg-3+b1 (armhf) 01 Sep 2014 07:38 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: gbrowse
Version: 2.54+dfsg-3+b1
Source Version: 2.54+dfsg-3
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/gbrowse-_mqwib/gbrowse-2.54+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/gbrowse-_mqwib' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-adbbb650-4cc1-46c1-9374-00f5cc4455c4' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1 jessie-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 jessie-staging/main Sources [7512 kB]
Get:3 http://172.17.0.1 jessie-staging/main armhf Packages [8583 kB]
Ign http://172.17.0.1 jessie-staging/main Translation-en
Fetched 16.1 MB in 31s (516 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
─────────
Checking available source versions...
Download source files with APT
──────────────────────────────
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'gbrowse' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debian-med/trunk/packages/gmod/gbrowse/trunk/
Need to get 4054 kB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main gbrowse 2.54+dfsg-3 (dsc) [2547 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main gbrowse 2.54+dfsg-3 (tar) [4031 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main gbrowse 2.54+dfsg-3 (diff) [19.6 kB]
Fetched 4054 kB in 1s (2111 kB/s)
Download complete and in download only mode
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-GGWHMA/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
init-system-helpers
Use 'apt-get autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 25 not upgraded.
Need to get 0 B/814 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12069 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), bioperl (>= 1.6.901), debhelper (>= 9), dh-apache2, apache2-dev, libbio-graphics-perl (>= 2.31), libcapture-tiny-perl, libcgi-session-perl, libgd-gd2-perl | libgd-gd2-noxpm-perl, libio-string-perl, libjson-perl, libstatistics-descriptive-perl, libwww-perl, libhttp-daemon-perl, perl, sqlite3, libdbd-sqlite3-perl, libterm-readkey-perl, libjs-prototype (>= 1.7), libjs-scriptaculous (>= 1.9), libvm-ec2-perl
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), bioperl (>= 1.6.901), debhelper (>= 9), dh-apache2, apache2-dev, libbio-graphics-perl (>= 2.31), libcapture-tiny-perl, libcgi-session-perl, libgd-gd2-perl, libio-string-perl, libjson-perl, libstatistics-descriptive-perl, libwww-perl, libhttp-daemon-perl, perl, sqlite3, libdbd-sqlite3-perl, libterm-readkey-perl, libjs-prototype (>= 1.7), libjs-scriptaculous (>= 1.9), libvm-ec2-perl
dpkg-deb: building package `sbuild-build-depends-gbrowse-dummy' in `/«BUILDDIR»/resolver-Vcu391/apt_archive/sbuild-build-depends-gbrowse-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install gbrowse build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
init-system-helpers
Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
apache2-dev bioperl bsdmainutils ca-certificates comerr-dev debhelper file
fontconfig-config fonts-dejavu-core gettext gettext-base groff-base
intltool-debian krb5-multidev libanyevent-http-perl libanyevent-perl libapr1
libapr1-dev libaprutil1 libaprutil1-dev libasprintf0c2 libbio-graphics-perl
libbio-perl-perl libcapture-tiny-perl libcgi-session-perl
libcommon-sense-perl libcroco3 libdata-stag-perl libdbd-sqlite3-perl
libdbi-perl libencode-locale-perl libexpat1 libexpat1-dev libffi6
libfile-listing-perl libfontconfig1 libfreetype6 libgcrypt11 libgd-gd2-perl
libgd3 libglib2.0-0 libgnutls26 libgpg-error0 libgssapi-krb5-2 libgssrpc4
libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl
libhttp-message-perl libhttp-negotiate-perl libio-html-perl
libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg8 libjs-prototype
libjs-scriptaculous libjson-perl libk5crypto3 libkadm5clnt-mit9
libkadm5srv-mit9 libkdb5-7 libkeyutils1 libkrb5-3 libkrb5support0
libldap-2.4-2 libldap2-dev liblist-moreutils-perl liblwp-mediatypes-perl
liblwp-protocol-https-perl libmagic1 libmysqlclient-dev libmysqlclient18
libnet-http-perl libnet-ssleay-perl libp11-kit0 libpcre3-dev libpcrecpp0
libpipeline1 libpq-dev libpq5 libsasl2-2 libsasl2-modules-db libsctp-dev
libsctp1 libsqlite3-0 libsqlite3-dev libssl-dev libssl1.0.0
libstatistics-descriptive-perl libstring-approx-perl libtasn1-6
libterm-readkey-perl libtiff5 libunistring0 liburi-perl libvm-ec2-perl
libvpx1 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6
libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl
libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4
man-db mysql-common netbase openssl po-debconf sqlite3 ucf uuid-dev
zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation doc-base dh-make gettext-doc groff
krb5-doc libev-perl libevent-perl libio-async-perl libpoe-perl
libtask-weaken-perl python libxml-sax-expatxs-perl libnet-daemon-perl
libsql-statement-perl rng-tools libgd-tools krb5-user libdata-dump-perl
libcrypt-ssleay-perl postgresql-doc-9.4 sqlite3-doc libauthen-ntlm-perl less
www-browser libmail-box-perl
Recommended packages:
bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl
libapache-dbi-perl libyaml-perl libace-perl libxml-twig-perl
libset-scalar-perl curl wget lynx-cur autopoint libasprintf-dev
libgettextpo-dev libasync-interrupt-perl libguard-perl libbio-scf-perl
libgd-svg-perl libalgorithm-munkres-perl libarray-compare-perl
libbio-asn1-entrezgene-perl libclone-perl libconvert-binary-c-perl
libdbd-mysql-perl libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl
libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl
libsort-naturally-perl libspreadsheet-parseexcel-perl
libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl
libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl
libxml-writer-perl perl-tk libxml-libxslt-perl libmldbm-perl libxml-perl
libglib2.0-data shared-mime-info libhtml-format-perl javascript-common
libjson-xs-perl krb5-locales libsasl2-modules lksctp-tools libssl-doc
libhtml-form-perl libmailtools-perl libxml-sax-expat-perl xml-core ifupdown
libmail-sendmail-perl
The following NEW packages will be installed:
apache2-dev bioperl bsdmainutils ca-certificates comerr-dev debhelper file
fontconfig-config fonts-dejavu-core gettext gettext-base groff-base
intltool-debian krb5-multidev libanyevent-http-perl libanyevent-perl libapr1
libapr1-dev libaprutil1 libaprutil1-dev libasprintf0c2 libbio-graphics-perl
libbio-perl-perl libcapture-tiny-perl libcgi-session-perl
libcommon-sense-perl libcroco3 libdata-stag-perl libdbd-sqlite3-perl
libdbi-perl libencode-locale-perl libexpat1 libexpat1-dev libffi6
libfile-listing-perl libfontconfig1 libfreetype6 libgcrypt11 libgd-gd2-perl
libgd3 libglib2.0-0 libgnutls26 libgpg-error0 libgssapi-krb5-2 libgssrpc4
libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl
libhttp-message-perl libhttp-negotiate-perl libio-html-perl
libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg8 libjs-prototype
libjs-scriptaculous libjson-perl libk5crypto3 libkadm5clnt-mit9
libkadm5srv-mit9 libkdb5-7 libkeyutils1 libkrb5-3 libkrb5support0
libldap-2.4-2 libldap2-dev liblist-moreutils-perl liblwp-mediatypes-perl
liblwp-protocol-https-perl libmagic1 libmysqlclient-dev libmysqlclient18
libnet-http-perl libnet-ssleay-perl libp11-kit0 libpcre3-dev libpcrecpp0
libpipeline1 libpq-dev libpq5 libsasl2-2 libsasl2-modules-db libsctp-dev
libsctp1 libsqlite3-0 libsqlite3-dev libssl-dev libssl1.0.0
libstatistics-descriptive-perl libstring-approx-perl libtasn1-6
libterm-readkey-perl libtiff5 libunistring0 liburi-perl libvm-ec2-perl
libvpx1 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6
libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl
libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4
man-db mysql-common netbase openssl po-debconf
sbuild-build-depends-gbrowse-dummy sqlite3 ucf uuid-dev zlib1g-dev
0 upgraded, 125 newly installed, 0 to remove and 25 not upgraded.
Need to get 33.4 MB/33.4 MB of archives.
After this operation, 108 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ jessie-staging/main libpipeline1 armhf 1.3.0-1 [21.1 kB]
Get:2 http://172.17.0.1/private/ jessie-staging/main libssl1.0.0 armhf 1.0.1i-2 [830 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main groff-base armhf 1.22.2-6 [962 kB]
Get:4 http://172.17.0.1/private/ jessie-staging/main bsdmainutils armhf 9.0.5 [206 kB]
Get:5 http://172.17.0.1/private/ jessie-staging/main man-db armhf 2.6.7.1-1 [964 kB]
Get:6 http://172.17.0.1/private/ jessie-staging/main libasprintf0c2 armhf 0.19.2-1 [30.5 kB]
Get:7 http://172.17.0.1/private/ jessie-staging/main libgpg-error0 armhf 1.13-3 [58.5 kB]
Get:8 http://172.17.0.1/private/ jessie-staging/main libgcrypt11 armhf 1.5.4-2 [234 kB]
Get:9 http://172.17.0.1/private/ jessie-staging/main libffi6 armhf 3.1-2 [18.1 kB]
Get:10 http://172.17.0.1/private/ jessie-staging/main libp11-kit0 armhf 0.20.3-2 [139 kB]
Get:11 http://172.17.0.1/private/ jessie-staging/main libtasn1-6 armhf 4.1-1 [42.2 kB]
Get:12 http://172.17.0.1/private/ jessie-staging/main libgnutls26 armhf 2.12.23-17 [490 kB]
Get:13 http://172.17.0.1/private/ jessie-staging/main libkeyutils1 armhf 1.5.9-5 [10.9 kB]
Get:14 http://172.17.0.1/private/ jessie-staging/main libkrb5support0 armhf 1.12.1+dfsg-7 [53.2 kB]
Get:15 http://172.17.0.1/private/ jessie-staging/main libk5crypto3 armhf 1.12.1+dfsg-7 [105 kB]
Get:16 http://172.17.0.1/private/ jessie-staging/main libkrb5-3 armhf 1.12.1+dfsg-7 [248 kB]
Get:17 http://172.17.0.1/private/ jessie-staging/main libgssapi-krb5-2 armhf 1.12.1+dfsg-7 [122 kB]
Get:18 http://172.17.0.1/private/ jessie-staging/main libgssrpc4 armhf 1.12.1+dfsg-7 [75.9 kB]
Get:19 http://172.17.0.1/private/ jessie-staging/main libkadm5clnt-mit9 armhf 1.12.1+dfsg-7 [61.4 kB]
Get:20 http://172.17.0.1/private/ jessie-staging/main libkdb5-7 armhf 1.12.1+dfsg-7 [60.6 kB]
Get:21 http://172.17.0.1/private/ jessie-staging/main libkadm5srv-mit9 armhf 1.12.1+dfsg-7 [72.9 kB]
Get:22 http://172.17.0.1/private/ jessie-staging/main libsasl2-modules-db armhf 2.1.26.dfsg1-11 [65.0 kB]
Get:23 http://172.17.0.1/private/ jessie-staging/main libsasl2-2 armhf 2.1.26.dfsg1-11 [96.0 kB]
Get:24 http://172.17.0.1/private/ jessie-staging/main libldap-2.4-2 armhf 2.4.39-1+rpi1+b1 [185 kB]
Get:25 http://172.17.0.1/private/ jessie-staging/main libmagic1 armhf 1:5.19-1 [232 kB]
Get:26 http://172.17.0.1/private/ jessie-staging/main libsqlite3-0 armhf 3.8.5-2 [357 kB]
Get:27 http://172.17.0.1/private/ jessie-staging/main libxml2 armhf 2.9.1+dfsg1-4 [698 kB]
Get:28 http://172.17.0.1/private/ jessie-staging/main libapr1 armhf 1.5.1-2 [78.2 kB]
Get:29 http://172.17.0.1/private/ jessie-staging/main libexpat1 armhf 2.1.0-6 [60.2 kB]
Get:30 http://172.17.0.1/private/ jessie-staging/main libaprutil1 armhf 1.5.3-3 [73.5 kB]
Get:31 http://172.17.0.1/private/ jessie-staging/main libglib2.0-0 armhf 2.40.0-4 [2252 kB]
Get:32 http://172.17.0.1/private/ jessie-staging/main libcroco3 armhf 0.6.8-3 [121 kB]
Get:33 http://172.17.0.1/private/ jessie-staging/main libfreetype6 armhf 2.5.2-1.1 [398 kB]
Get:34 http://172.17.0.1/private/ jessie-staging/main ucf all 3.0030 [69.7 kB]
Get:35 http://172.17.0.1/private/ jessie-staging/main fonts-dejavu-core all 2.34-1 [1047 kB]
Get:36 http://172.17.0.1/private/ jessie-staging/main fontconfig-config all 2.11.0-6 [273 kB]
Get:37 http://172.17.0.1/private/ jessie-staging/main libfontconfig1 armhf 2.11.0-6 [310 kB]
Get:38 http://172.17.0.1/private/ jessie-staging/main libjpeg8 armhf 8d1-1 [108 kB]
Get:39 http://172.17.0.1/private/ jessie-staging/main libjbig0 armhf 2.1-3 [27.3 kB]
Get:40 http://172.17.0.1/private/ jessie-staging/main libtiff5 armhf 4.0.3-9 [191 kB]
Get:41 http://172.17.0.1/private/ jessie-staging/main libvpx1 armhf 1.3.0-2+rpi1 [363 kB]
Get:42 http://172.17.0.1/private/ jessie-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:43 http://172.17.0.1/private/ jessie-staging/main libxdmcp6 armhf 1:1.1.1-1 [24.6 kB]
Get:44 http://172.17.0.1/private/ jessie-staging/main libxcb1 armhf 1.10-3 [38.1 kB]
Get:45 http://172.17.0.1/private/ jessie-staging/main libx11-data all 2:1.6.2-3 [126 kB]
Get:46 http://172.17.0.1/private/ jessie-staging/main libx11-6 armhf 2:1.6.2-3 [656 kB]
Get:47 http://172.17.0.1/private/ jessie-staging/main libxpm4 armhf 1:3.5.11-1 [41.7 kB]
Get:48 http://172.17.0.1/private/ jessie-staging/main libgd3 armhf 2.1.0-4 [125 kB]
Get:49 http://172.17.0.1/private/ jessie-staging/main mysql-common all 5.5.37-1 [83.7 kB]
Get:50 http://172.17.0.1/private/ jessie-staging/main libmysqlclient18 armhf 5.5.37-1 [621 kB]
Get:51 http://172.17.0.1/private/ jessie-staging/main libpcrecpp0 armhf 1:8.35-3 [138 kB]
Get:52 http://172.17.0.1/private/ jessie-staging/main libpq5 armhf 9.4~beta2-1 [103 kB]
Get:53 http://172.17.0.1/private/ jessie-staging/main libsctp1 armhf 1.0.16+dfsg-2 [27.1 kB]
Get:54 http://172.17.0.1/private/ jessie-staging/main libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:55 http://172.17.0.1/private/ jessie-staging/main netbase all 5.2 [18.9 kB]
Get:56 http://172.17.0.1/private/ jessie-staging/main file armhf 1:5.19-1 [57.7 kB]
Get:57 http://172.17.0.1/private/ jessie-staging/main gettext-base armhf 0.19.2-1 [116 kB]
Get:58 http://172.17.0.1/private/ jessie-staging/main openssl armhf 1.0.1i-2 [660 kB]
Get:59 http://172.17.0.1/private/ jessie-staging/main uuid-dev armhf 2.20.1-5.8 [70.0 kB]
Get:60 http://172.17.0.1/private/ jessie-staging/main libsctp-dev armhf 1.0.16+dfsg-2 [82.9 kB]
Get:61 http://172.17.0.1/private/ jessie-staging/main libapr1-dev armhf 1.5.1-2 [582 kB]
Get:62 http://172.17.0.1/private/ jessie-staging/main libldap2-dev armhf 2.4.39-1+rpi1+b1 [293 kB]
Get:63 http://172.17.0.1/private/ jessie-staging/main libexpat1-dev armhf 2.1.0-6 [117 kB]
Get:64 http://172.17.0.1/private/ jessie-staging/main libpcre3-dev armhf 1:8.35-3 [407 kB]
Get:65 http://172.17.0.1/private/ jessie-staging/main libsqlite3-dev armhf 3.8.5-2 [464 kB]
Get:66 http://172.17.0.1/private/ jessie-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-1+rpi1 [192 kB]
Get:67 http://172.17.0.1/private/ jessie-staging/main libssl-dev armhf 1.0.1i-2 [1073 kB]
Get:68 http://172.17.0.1/private/ jessie-staging/main comerr-dev armhf 2.1-1.42.11-2 [37.6 kB]
Get:69 http://172.17.0.1/private/ jessie-staging/main krb5-multidev armhf 1.12.1+dfsg-7 [141 kB]
Get:70 http://172.17.0.1/private/ jessie-staging/main libpq-dev armhf 9.4~beta2-1 [143 kB]
Get:71 http://172.17.0.1/private/ jessie-staging/main libmysqlclient-dev armhf 5.5.37-1 [893 kB]
Get:72 http://172.17.0.1/private/ jessie-staging/main libaprutil1-dev armhf 1.5.3-3 [354 kB]
Get:73 http://172.17.0.1/private/ jessie-staging/main gettext armhf 0.19.2-1 [1160 kB]
Get:74 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:75 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu3 [220 kB]
Get:76 http://172.17.0.1/private/ jessie-staging/main debhelper all 9.20140817 [814 kB]
Get:77 http://172.17.0.1/private/ jessie-staging/main apache2-dev armhf 2.4.10-1 [277 kB]
Get:78 http://172.17.0.1/private/ jessie-staging/main libio-string-perl all 1.08-3 [12.3 kB]
Get:79 http://172.17.0.1/private/ jessie-staging/main libdata-stag-perl all 0.13-1 [476 kB]
Get:80 http://172.17.0.1/private/ jessie-staging/main libbio-perl-perl all 1.6.924-1 [4763 kB]
Get:81 http://172.17.0.1/private/ jessie-staging/main bioperl all 1.6.924-1 [419 kB]
Get:82 http://172.17.0.1/private/ jessie-staging/main ca-certificates all 20140325 [193 kB]
Get:83 http://172.17.0.1/private/ jessie-staging/main libanyevent-perl armhf 7.070-2+b1 [404 kB]
Get:84 http://172.17.0.1/private/ jessie-staging/main libcommon-sense-perl armhf 3.73-1+b1 [23.4 kB]
Get:85 http://172.17.0.1/private/ jessie-staging/main libanyevent-http-perl all 2.21-1 [34.5 kB]
Get:86 http://172.17.0.1/private/ jessie-staging/main libgd-gd2-perl armhf 1:2.46-3.1+b2 [171 kB]
Get:87 http://172.17.0.1/private/ jessie-staging/main libbio-graphics-perl all 2.39-1 [605 kB]
Get:88 http://172.17.0.1/private/ jessie-staging/main libcapture-tiny-perl all 0.25-1 [24.1 kB]
Get:89 http://172.17.0.1/private/ jessie-staging/main libcgi-session-perl all 4.48-1 [124 kB]
Get:90 http://172.17.0.1/private/ jessie-staging/main libdbi-perl armhf 1.631-3+b1 [807 kB]
Get:91 http://172.17.0.1/private/ jessie-staging/main libdbd-sqlite3-perl armhf 1.42-2+b1 [107 kB]
Get:92 http://172.17.0.1/private/ jessie-staging/main libencode-locale-perl all 1.03-1 [13.6 kB]
Get:93 http://172.17.0.1/private/ jessie-staging/main libhttp-date-perl all 6.02-1 [10.7 kB]
Get:94 http://172.17.0.1/private/ jessie-staging/main libfile-listing-perl all 6.04-1 [10.3 kB]
Get:95 http://172.17.0.1/private/ jessie-staging/main liburi-perl all 1.64-1 [95.5 kB]
Get:96 http://172.17.0.1/private/ jessie-staging/main libhtml-tagset-perl all 3.20-2 [13.5 kB]
Get:97 http://172.17.0.1/private/ jessie-staging/main libhtml-parser-perl armhf 3.71-1+b4 [105 kB]
Get:98 http://172.17.0.1/private/ jessie-staging/main libhtml-tree-perl all 5.03-1 [210 kB]
Get:99 http://172.17.0.1/private/ jessie-staging/main libio-html-perl all 1.001-1 [17.6 kB]
Get:100 http://172.17.0.1/private/ jessie-staging/main liblwp-mediatypes-perl all 6.02-1 [22.1 kB]
Get:101 http://172.17.0.1/private/ jessie-staging/main libhttp-message-perl all 6.06-1 [80.1 kB]
Get:102 http://172.17.0.1/private/ jessie-staging/main libhttp-cookies-perl all 6.00-2 [23.5 kB]
Get:103 http://172.17.0.1/private/ jessie-staging/main libhttp-daemon-perl all 6.01-1 [17.3 kB]
Get:104 http://172.17.0.1/private/ jessie-staging/main libhttp-negotiate-perl all 6.00-2 [13.6 kB]
Get:105 http://172.17.0.1/private/ jessie-staging/main libnet-ssleay-perl armhf 1.65-1+b1 [259 kB]
Get:106 http://172.17.0.1/private/ jessie-staging/main libio-socket-ssl-perl all 1.997-2 [167 kB]
Get:107 http://172.17.0.1/private/ jessie-staging/main libjs-prototype all 1.7.1-3 [44.3 kB]
Get:108 http://172.17.0.1/private/ jessie-staging/main libjs-scriptaculous all 1.9.0-2 [129 kB]
Get:109 http://172.17.0.1/private/ jessie-staging/main libjson-perl all 2.61-1 [84.7 kB]
Get:110 http://172.17.0.1/private/ jessie-staging/main liblist-moreutils-perl armhf 0.33-2+b1 [40.9 kB]
Get:111 http://172.17.0.1/private/ jessie-staging/main libnet-http-perl all 6.07-1 [24.8 kB]
Get:112 http://172.17.0.1/private/ jessie-staging/main libwww-robotrules-perl all 6.01-1 [14.3 kB]
Get:113 http://172.17.0.1/private/ jessie-staging/main libwww-perl all 6.08-1 [194 kB]
Get:114 http://172.17.0.1/private/ jessie-staging/main liblwp-protocol-https-perl all 6.06-2 [9582 B]
Get:115 http://172.17.0.1/private/ jessie-staging/main libstatistics-descriptive-perl all 3.0607-1 [41.4 kB]
Get:116 http://172.17.0.1/private/ jessie-staging/main libstring-approx-perl armhf 3.27-1+b2 [38.8 kB]
Get:117 http://172.17.0.1/private/ jessie-staging/main libterm-readkey-perl armhf 2.32-1+b2 [26.1 kB]
Get:118 http://172.17.0.1/private/ jessie-staging/main libxml-namespacesupport-perl all 1.11-1 [14.8 kB]
Get:119 http://172.17.0.1/private/ jessie-staging/main libxml-sax-base-perl all 1.07-1 [23.1 kB]
Get:120 http://172.17.0.1/private/ jessie-staging/main libxml-sax-perl all 0.99+dfsg-2 [68.3 kB]
Get:121 http://172.17.0.1/private/ jessie-staging/main libxml-libxml-perl armhf 2.0116+dfsg-1+b2 [340 kB]
Get:122 http://172.17.0.1/private/ jessie-staging/main libxml-simple-perl all 2.20-1 [74.7 kB]
Get:123 http://172.17.0.1/private/ jessie-staging/main libvm-ec2-perl all 1.25-1 [621 kB]
Get:124 http://172.17.0.1/private/ jessie-staging/main sqlite3 armhf 3.8.5-2 [94.7 kB]
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Setting up libpipeline1:armhf (1.3.0-1) ...
Setting up libssl1.0.0:armhf (1.0.1i-2) ...
Setting up groff-base (1.22.2-6) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up man-db (2.6.7.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libasprintf0c2:armhf (0.19.2-1) ...
Setting up libgpg-error0:armhf (1.13-3) ...
Setting up libgcrypt11:armhf (1.5.4-2) ...
Setting up libffi6:armhf (3.1-2) ...
Setting up libp11-kit0:armhf (0.20.3-2) ...
Setting up libtasn1-6:armhf (4.1-1) ...
Setting up libgnutls26:armhf (2.12.23-17) ...
Setting up libkeyutils1:armhf (1.5.9-5) ...
Setting up libkrb5support0:armhf (1.12.1+dfsg-7) ...
Setting up libk5crypto3:armhf (1.12.1+dfsg-7) ...
Setting up libkrb5-3:armhf (1.12.1+dfsg-7) ...
Setting up libgssapi-krb5-2:armhf (1.12.1+dfsg-7) ...
Setting up libgssrpc4:armhf (1.12.1+dfsg-7) ...
Setting up libkadm5clnt-mit9:armhf (1.12.1+dfsg-7) ...
Setting up libkdb5-7:armhf (1.12.1+dfsg-7) ...
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Setting up libsasl2-modules-db:armhf (2.1.26.dfsg1-11) ...
Setting up libsasl2-2:armhf (2.1.26.dfsg1-11) ...
Setting up libldap-2.4-2:armhf (2.4.39-1+rpi1+b1) ...
Setting up libmagic1:armhf (1:5.19-1) ...
Setting up libsqlite3-0:armhf (3.8.5-2) ...
Setting up libxml2:armhf (2.9.1+dfsg1-4) ...
Setting up libapr1:armhf (1.5.1-2) ...
Setting up libexpat1:armhf (2.1.0-6) ...
Setting up libaprutil1:armhf (1.5.3-3) ...
Setting up libglib2.0-0:armhf (2.40.0-4) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.8-3) ...
Setting up libfreetype6:armhf (2.5.2-1.1) ...
Setting up ucf (3.0030) ...
Setting up fonts-dejavu-core (2.34-1) ...
Setting up fontconfig-config (2.11.0-6) ...
Setting up libfontconfig1:armhf (2.11.0-6) ...
Setting up libjpeg8:armhf (8d1-1) ...
Setting up libjbig0:armhf (2.1-3) ...
Setting up libtiff5:armhf (4.0.3-9) ...
Setting up libvpx1:armhf (1.3.0-2+rpi1) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up libxdmcp6:armhf (1:1.1.1-1) ...
Setting up libxcb1:armhf (1.10-3) ...
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Setting up libxpm4:armhf (1:3.5.11-1) ...
Setting up libgd3:armhf (2.1.0-4) ...
Setting up mysql-common (5.5.37-1) ...
Setting up libmysqlclient18:armhf (5.5.37-1) ...
Setting up libpcrecpp0:armhf (1:8.35-3) ...
Setting up libpq5:armhf (9.4~beta2-1) ...
Setting up libsctp1:armhf (1.0.16+dfsg-2) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up netbase (5.2) ...
Configuration file '/etc/protocols'
==> File on system created by you or by a script.
==> File also in package provided by package maintainer.
==> Using current old file as you requested.
Configuration file '/etc/services'
==> File on system created by you or by a script.
==> File also in package provided by package maintainer.
==> Using current old file as you requested.
Setting up file (1:5.19-1) ...
Setting up gettext-base (0.19.2-1) ...
Setting up openssl (1.0.1i-2) ...
Setting up uuid-dev (2.20.1-5.8) ...
Setting up libsctp-dev (1.0.16+dfsg-2) ...
Setting up libapr1-dev (1.5.1-2) ...
Setting up libldap2-dev:armhf (2.4.39-1+rpi1+b1) ...
Setting up libexpat1-dev:armhf (2.1.0-6) ...
Setting up libpcre3-dev:armhf (1:8.35-3) ...
Setting up libsqlite3-dev:armhf (3.8.5-2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-1+rpi1) ...
Setting up libssl-dev:armhf (1.0.1i-2) ...
Setting up comerr-dev (2.1-1.42.11-2) ...
Setting up krb5-multidev (1.12.1+dfsg-7) ...
Setting up libpq-dev (9.4~beta2-1) ...
Setting up libmysqlclient-dev (5.5.37-1) ...
Setting up libaprutil1-dev (1.5.3-3) ...
Setting up gettext (0.19.2-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu3) ...
Setting up debhelper (9.20140817) ...
Setting up apache2-dev (2.4.10-1) ...
Setting up libio-string-perl (1.08-3) ...
Setting up libdata-stag-perl (0.13-1) ...
Setting up libbio-perl-perl (1.6.924-1) ...
Setting up bioperl (1.6.924-1) ...
Setting up ca-certificates (20140325) ...
Setting up libanyevent-perl (7.070-2+b1) ...
Setting up libcommon-sense-perl (3.73-1+b1) ...
Setting up libanyevent-http-perl (2.21-1) ...
Setting up libgd-gd2-perl (1:2.46-3.1+b2) ...
Setting up libbio-graphics-perl (2.39-1) ...
Setting up libcapture-tiny-perl (0.25-1) ...
Setting up libcgi-session-perl (4.48-1) ...
Setting up libdbi-perl (1.631-3+b1) ...
Setting up libdbd-sqlite3-perl (1.42-2+b1) ...
Setting up libencode-locale-perl (1.03-1) ...
Setting up libhttp-date-perl (6.02-1) ...
Setting up libfile-listing-perl (6.04-1) ...
Setting up liburi-perl (1.64-1) ...
Setting up libhtml-tagset-perl (3.20-2) ...
Setting up libhtml-parser-perl (3.71-1+b4) ...
Setting up libhtml-tree-perl (5.03-1) ...
Setting up libio-html-perl (1.001-1) ...
Setting up liblwp-mediatypes-perl (6.02-1) ...
Setting up libhttp-message-perl (6.06-1) ...
Setting up libhttp-cookies-perl (6.00-2) ...
Setting up libhttp-daemon-perl (6.01-1) ...
Setting up libhttp-negotiate-perl (6.00-2) ...
Setting up libnet-ssleay-perl (1.65-1+b1) ...
Setting up libio-socket-ssl-perl (1.997-2) ...
Setting up libjs-prototype (1.7.1-3) ...
Setting up libjs-scriptaculous (1.9.0-2) ...
Setting up libjson-perl (2.61-1) ...
Setting up liblist-moreutils-perl (0.33-2+b1) ...
Setting up libnet-http-perl (6.07-1) ...
Setting up libwww-robotrules-perl (6.01-1) ...
Setting up libstatistics-descriptive-perl (3.0607-1) ...
Setting up libstring-approx-perl (3.27-1+b2) ...
Setting up libterm-readkey-perl (2.32-1+b2) ...
Setting up libxml-namespacesupport-perl (1.11-1) ...
Setting up libxml-sax-base-perl (1.07-1) ...
Setting up libxml-sax-perl (0.99+dfsg-2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libxml-libxml-perl (2.0116+dfsg-1+b2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libxml-simple-perl (2.20-1) ...
Setting up sqlite3 (3.8.5-2) ...
Setting up liblwp-protocol-https-perl (6.06-2) ...
Setting up libwww-perl (6.08-1) ...
Setting up libvm-ec2-perl (1.25-1) ...
Setting up sbuild-build-depends-gbrowse-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.19-7) ...
Processing triggers for ca-certificates (20140325) ...
Updating certificates in /etc/ssl/certs... 168 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d....done.
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.15-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.24.51.20140727-1 dpkg-dev_1.17.10 g++-4.6_4.6.4-5+rpi1 g++-4.9_4.9.1-4 gcc-4.6_4.6.4-5+rpi1 gcc-4.8_4.8.3-7 gcc-4.9_4.9.1-4 libc6-dev_2.19-7 libstdc++-4.9-dev_4.9.1-4 libstdc++6_4.9.1-4 libstdc++6-4.6-dev_4.6.4-5+rpi1 linux-libc-dev_3.14.4-1+rpi1
Package versions: apache2-dev_2.4.10-1 apt_1.0.6 base-files_7.5+rpi1 base-passwd_3.5.33 bash_4.3-8 binutils_2.24.51.20140727-1 bioperl_1.6.924-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.8 build-essential_11.6 bzip2_1.0.6-7 ca-certificates_20140325 comerr-dev_2.1-1.42.11-2 coreutils_8.21-1.2 cpio_2.11+dfsg-2 cpp_4:4.9.1-1 cpp-4.6_4.6.4-5+rpi1 cpp-4.8_4.8.3-7 cpp-4.9_4.9.1-4 dash_0.5.7-4 debconf_1.5.53 debfoster_2.7-2 debhelper_9.20140817 debianutils_4.4 diffutils_1:3.3-1 dpkg_1.17.10 dpkg-dev_1.17.10 e2fslibs_1.42.11-2 e2fsprogs_1.42.11-2 fakeroot_1.20.1-1.1 file_1:5.19-1 findutils_4.4.2-9 fontconfig-config_2.11.0-6 fonts-dejavu-core_2.34-1 g++_4:4.9.1-1 g++-4.6_4.6.4-5+rpi1 g++-4.9_4.9.1-4 gcc_4:4.9.1-1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-5+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8_4.8.3-7 gcc-4.8-base_4.8.3-7 gcc-4.9_4.9.1-4 gcc-4.9-base_4.9.1-4 gettext_0.19.2-1 gettext-base_0.19.2-1 gnupg_1.4.18-2 gpgv_1.4.18-2 grep_2.20-2 groff-base_1.22.2-6 gzip_1.6-3 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libjs-prototype_1.7.1-3 libjs-scriptaculous_1.9.0-2 libjson-perl_2.61-1 libk5crypto3_1.12.1+dfsg-7 libkadm5clnt-mit9_1.12.1+dfsg-7 libkadm5srv-mit9_1.12.1+dfsg-7 libkdb5-7_1.12.1+dfsg-7 libkeyutils1_1.5.9-5 libklibc_2.0.3-1+rpi1 libkmod2_18-1 libkrb5-3_1.12.1+dfsg-7 libkrb5support0_1.12.1+dfsg-7 libldap-2.4-2_2.4.39-1+rpi1+b1 libldap2-dev_2.4.39-1+rpi1+b1 liblist-moreutils-perl_0.33-2+b1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.06-2 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.19-1 libmodule-build-perl_0.420800-1 libmodule-pluggable-perl_5.1-1 libmodule-signature-perl_0.73-1 libmount1_2.20.1-5.8 libmpc2_0.9-4 libmpc3_1.0.2-1 libmpfr4_3.1.2-1 libmysqlclient-dev_5.5.37-1 libmysqlclient18_5.5.37-1 libncurses5_5.9+20140712-2 libncursesw5_5.9+20140712-2 libnet-http-perl_6.07-1 libnet-ssleay-perl_1.65-1+b1 libp11-kit0_0.20.3-2 libpackage-constants-perl_0.04-1 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_1:8.35-3 libpcre3-dev_1:8.35-3 libpcrecpp0_1:8.35-3 libpipeline1_1.3.0-1 libpng12-0_1.2.50-2 libpod-latex-perl_0.61-1 libpod-readme-perl_0.11-1 libpq-dev_9.4~beta2-1 libpq5_9.4~beta2-1 libprocps0_1:3.3.4-2 libprocps3_1:3.3.9-7 libreadline6_6.3-8 libregexp-common-perl_2013031301-1 libsasl2-2_2.1.26.dfsg1-11 libsasl2-modules-db_2.1.26.dfsg1-11 libsctp-dev_1.0.16+dfsg-2 libsctp1_1.0.16+dfsg-2 libselinux1_2.3-1 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-1 libslang2_2.2.4-17 libsqlite3-0_3.8.5-2 libsqlite3-dev_3.8.5-2 libss2_1.42.11-2 libssl-dev_1.0.1i-2 libssl1.0.0_1.0.1i-2 libstatistics-descriptive-perl_3.0607-1 libstdc++-4.9-dev_4.9.1-4 libstdc++6_4.9.1-4 libstdc++6-4.6-dev_4.6.4-5+rpi1 libstring-approx-perl_3.27-1+b2 libswitch-perl_2.17-1 libtasn1-6_4.1-1 libterm-readkey-perl_2.32-1+b2 libtiff5_4.0.3-9 libtimedate-perl_2.3000-2 libtinfo5_5.9+20140712-2 libubsan0_4.9.1-4 libudev0_175-7.2 libudev1_208-6 libunistring0_0.9.3-5.2 liburi-perl_1.64-1 libusb-0.1-4_2:0.1.12-24 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.8 libvm-ec2-perl_1.25-1 libvpx1_1.3.0-2+rpi1 libwww-perl_6.08-1 libwww-robotrules-perl_6.01-1 libx11-6_2:1.6.2-3 libx11-data_2:1.6.2-3 libxau6_1:1.0.8-1 libxcb1_1.10-3 libxdmcp6_1:1.1.1-1 libxml-libxml-perl_2.0116+dfsg-1+b2 libxml-namespacesupport-perl_1.11-1 libxml-sax-base-perl_1.07-1 libxml-sax-perl_0.99+dfsg-2 libxml-simple-perl_2.20-1 libxml2_2.9.1+dfsg1-4 libxpm4_1:3.5.11-1 linux-libc-dev_3.14.4-1+rpi1 login_1:4.2-2 lsb-base_4.1+Debian13+rpi1 make_4.0-8 makedev_2.3.1-93 man-db_2.6.7.1-1 mawk_1.3.3-17 mount_2.20.1-5.8 multiarch-support_2.19-7 mysql-common_5.5.37-1 nano_2.2.6-3 ncurses-base_5.9+20140712-2 ncurses-bin_5.9+20140712-2 netbase_5.2 openssl_1.0.1i-2 passwd_1:4.2-2 patch_2.7.1-6 perl_5.20.0-4 perl-base_5.20.0-4 perl-modules_5.20.0-4 plymouth_0.9.0-6 po-debconf_1.0.16+nmu3 procps_1:3.3.9-7 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gbrowse-dummy_0.invalid.0 sed_4.2.2-4 sensible-utils_0.0.9 sqlite3_3.8.5-2 startpar_0.59-3 sysv-rc_2.88dsf-53.3 sysvinit_2.88dsf-53.3 sysvinit-core_2.88dsf-53.3 sysvinit-utils_2.88dsf-53.3 tar_1.27.1-2 tzdata_2014f-1 ucf_3.0030 udev_208-6 util-linux_2.20.1-5.8 uuid-dev_2.20.1-5.8 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-1+rpi1 zlib1g-dev_1:1.2.8.dfsg-1+rpi1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu Jul 10 09:35:06 2014 UTC using RSA key ID 326D8438
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./gbrowse_2.54+dfsg-3.dsc
dpkg-source: info: extracting gbrowse in gbrowse-2.54+dfsg
dpkg-source: info: unpacking gbrowse_2.54+dfsg.orig.tar.bz2
dpkg-source: info: unpacking gbrowse_2.54+dfsg-3.debian.tar.xz
dpkg-source: info: applying debian-packaging-patch
dpkg-source: info: applying gbrowse-slave-fix_defaults_path
dpkg-source: info: applying manpages.patch
dpkg-source: info: applying fix_pop_url
dpkg-source: info: applying skipRenderFarmTest_UpstreamBug12
dpkg-source: info: applying skip_check_installed_test.patch
dpkg-source: info: applying source_init_functions
Check disc space
────────────────
Sufficient free space for build
Hack binNMU version
───────────────────
Created changelog entry for binNMU version 2.54+dfsg-3+b1
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-adbbb650-4cc1-46c1-9374-00f5cc4455c4
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package gbrowse
dpkg-buildpackage: source version 2.54+dfsg-3+b1
dpkg-buildpackage: source distribution jessie-staging
dpkg-source --before-build gbrowse-2.54+dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean --with apache2
dh_testdir
dh_auto_clean
dh_clean
debian/rules build-arch
dh build-arch --with apache2
dh_testdir -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
dh_auto_configure -- --conf=/etc/gbrowse --htdocs=/usr/share/gbrowse/htdocs --tmp=/var/cache/gbrowse --databases=/var/lib/gbrowse/databases --cgibin=/usr/lib/cgi-bin/gbrowse --www-user=www-data --registration_done=1 --persistent=/var/lib/gbrowse
Possible precedence issue with control flow operator at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 1032.
Checking prerequisites...
recommends:
* Bio::DB::BigFile is not installed
* Bio::DB::Sam is not installed
* Bio::Das is not installed
* Crypt::SSLeay is not installed
* DBD::Pg is not installed
* DBD::mysql is not installed
* DB_File::Lock is not installed
* FCGI is not installed
* File::NFSLock is not installed
* GD::SVG is not installed
* Net::OpenID::Consumer is not installed
* Net::SMTP::SSL is not installed
* Parse::Apache::ServerStatus is not installed
* Template is not installed
* Do not worry if some "recommended" prerequisites are missing. You can install *
* them later if you need the features they provide. Do not proceed with the *
* install if any of "REQUIRED" prerequisites are missing. *
* *
* The optional Safe::World module does not currently run on Perl 5.10 or *
* higher, and so cannot be installed. *
ERRORS/WARNINGS FOUND IN PREREQUISITES. You may wish to install the versions
of the modules indicated above before proceeding with this installation
Run 'Build installdeps' to install missing prerequisites.
**** WARNING *****************************************************************************************
If you are upgrading from an earlier version of GBrowse and wish to use named user accounts, please
set "user_accounts" to 1 in /etc/gbrowse2/GBrowse.conf and run bin/gbrowse_metadb_config.pl to
create/update your user account database.
See /etc/gbrowse2/GBrowse.conf.new for suggested settings.
******************************************************************************************************
Now run:
./Build test
./Build demo (optional)
./Build install (as superuser/administrator)
-or-
./Build install_slave (optional, for slave installations)
Other useful targets:
./Build register (to register your copy of GBrowse)
./Build reconfig (to reconfigure install locations)
./Build demostop (to stop the demo)
Created MYMETA.yml and MYMETA.json
Creating new 'Build' script for 'GBrowse' version '2.54'
make[1]: Leaving directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
dh_auto_build -a
Possible precedence issue with control flow operator at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 1032.
NOTE: Run ./Build reconfig to change existing configuration.
Building GBrowse
cc -I/«BUILDDIR»/gbrowse-2.54+dfsg/libalign -I/usr/lib/arm-linux-gnueabihf/perl/5.20/CORE -DVERSION="2.54" -DXS_VERSION="2.54" -fPIC -c -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fstack-protector -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -o lib/Bio/Graphics/Browser2/CAlign.o lib/Bio/Graphics/Browser2/CAlign.c
ExtUtils::Mkbootstrap::Mkbootstrap('blib/arch/auto/Bio/Graphics/Browser2/CAlign/CAlign.bs')
cc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z,relro -shared -L/usr/local/lib -fstack-protector -o blib/arch/auto/Bio/Graphics/Browser2/CAlign/CAlign.so lib/Bio/Graphics/Browser2/CAlign.o
Performing variable substitutions in blib/conf/detail_select_menu.conf
Performing variable substitutions in blib/conf/enzymes.txt
Performing variable substitutions in blib/conf/GBrowse.conf
Performing variable substitutions in blib/conf/log4perl.conf
Performing variable substitutions in blib/conf/MobyServices/moby.conf
Performing variable substitutions in blib/conf/pop_demo.conf
Performing variable substitutions in blib/conf/renderfarm.conf
Performing variable substitutions in blib/conf/slave_preload.conf
Performing variable substitutions in blib/conf/submitter_plugin.conf
Performing variable substitutions in blib/conf/synteny/rice_synteny.conf
Performing variable substitutions in blib/conf/synteny/wild_rice_synteny.conf
Performing variable substitutions in blib/conf/themes/solid_gray_colors
Performing variable substitutions in blib/conf/themes/transparent_colors
Performing variable substitutions in blib/conf/themes/warm_colors
Performing variable substitutions in blib/conf/volvox.conf
Performing variable substitutions in blib/conf/yeast_chr1+2.conf
Performing variable substitutions in blib/conf/yeast_renderfarm.conf
Performing variable substitutions in blib/conf/yeast_simple.conf
Performing variable substitutions in blib/htdocs/annotation_help.html
Performing variable substitutions in blib/htdocs/cloud_index.html
Performing variable substitutions in blib/htdocs/example_scripts/index.html
Performing variable substitutions in blib/htdocs/example_scripts/README
Performing variable substitutions in blib/htdocs/gbrowse_karyotype_help.html
Performing variable substitutions in blib/htdocs/gbrowse_syn_help.html
Performing variable substitutions in blib/htdocs/general_help.html
Performing variable substitutions in blib/htdocs/index.html
Performing variable substitutions in blib/htdocs/tutorial/conf_files/elegans_core.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/elegans_extra.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/HEADER.html
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_final.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_final_withPhylo.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_halfway.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_Phylo.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_quarter.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_refactored.conf
Performing variable substitutions in blib/htdocs/tutorial/data_files/HEADER.html
Performing variable substitutions in blib/htdocs/tutorial/tutorial.html
Performing variable substitutions in blib/htdocs/tutorial/tutorial.phyTreeEdit.html
Performing variable substitutions in blib/htdocs/vbox_index.html
Use of uninitialized value in pattern match (m//) at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 728.
dh_auto_test -a
Possible precedence issue with control flow operator at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 1032.
NOTE: Run ./Build reconfig to change existing configuration.
Use of uninitialized value in pattern match (m//) at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 728.
t/00.compile.t ............ ok
t/01.yeast.t .............. ok
t/02.rearchitecture.t ..... ok
t/03.render.t ............. skipped: (no reason given)
Sometimes this test gets 'stuck'. If this happens, kill the test and Build test again.
t/04.remoteserver.t ....... skipped: (no reason given)
t/05.deferredrendering.t .. ok
t/06.featuresearch.t ...... skipped: (no reason given)
t/07.karyotype.t .......... ok
t/08.calign.t ............. ok
All tests successful.
Files=9, Tests=225, 88 wallclock secs ( 0.38 usr 0.07 sys + 74.75 cusr 3.91 csys = 79.11 CPU)
Result: PASS
fakeroot debian/rules binary-arch
dh binary-arch --with apache2
dh_testroot -a
dh_prep -a
debian/rules override_dh_installdirs
make[1]: Entering directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
# svn(-buildpackage) seems to ignore the x bit
chmod +x debian/gbrowse-calign.dirs
dh_installdirs
make[1]: Leaving directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
debian/rules override_dh_auto_install
make[1]: Entering directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
./Build --install_base=debian/gbrowse debianinstall
Possible precedence issue with control flow operator at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 1032.
NOTE: Run ./Build reconfig to change existing configuration.
Use of uninitialized value in pattern match (m//) at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 728.
Building GBrowse
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/auto/Bio/Graphics/Browser2/CAlign/CAlign.bs
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/auto/Bio/Graphics/Browser2/CAlign/CAlign.so
Installing debian/gbrowse/man/man1/ucsc_genes2gff.pl.1p
Installing debian/gbrowse/man/man1/load_genbank.pl.1p
Installing debian/gbrowse/man/man1/make_das_conf.pl.1p
Installing debian/gbrowse/man/man1/gtf2gff3.pl.1p
Installing debian/gbrowse/man/man1/gbrowse_clean.pl.1p
Installing debian/gbrowse/man/man1/gbrowse_grow_cloud_vol.pl.1p
Installing debian/gbrowse/man/man1/wiggle2gff3.pl.1p
Installing debian/gbrowse/man/man1/bed2gff3.pl.1p
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/das
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbgff
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse_details
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse_gmap
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse_img
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse_key_img
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse_login
Installing debian/gbrowse/usr/lib/cgi-bin/gbrowse/gbrowse_syn
Installing debian/gbrowse/etc/gbrowse/detail_select_menu.conf
Installing debian/gbrowse/etc/gbrowse/enzymes.txt
Installing debian/gbrowse/etc/gbrowse/GBrowse.conf
Installing debian/gbrowse/etc/gbrowse/log4perl.conf
Installing debian/gbrowse/etc/gbrowse/pop_demo.conf
Installing debian/gbrowse/etc/gbrowse/renderfarm.conf
Installing debian/gbrowse/etc/gbrowse/slave_preload.conf
Installing debian/gbrowse/etc/gbrowse/submitter_plugin.conf
Installing debian/gbrowse/etc/gbrowse/volvox.conf
Installing debian/gbrowse/etc/gbrowse/yeast_chr1+2.conf
Installing debian/gbrowse/etc/gbrowse/yeast_renderfarm.conf
Installing debian/gbrowse/etc/gbrowse/yeast_simple.conf
Installing debian/gbrowse/etc/gbrowse/languages/de.pm
Installing debian/gbrowse/etc/gbrowse/languages/en.pm
Installing debian/gbrowse/etc/gbrowse/languages/es.pm
Installing debian/gbrowse/etc/gbrowse/languages/fr.pm
Installing debian/gbrowse/etc/gbrowse/languages/is.pm
Installing debian/gbrowse/etc/gbrowse/languages/it.pm
Installing debian/gbrowse/etc/gbrowse/languages/ja.pm
Installing debian/gbrowse/etc/gbrowse/languages/ko.pm
Installing debian/gbrowse/etc/gbrowse/languages/nl.pm
Installing debian/gbrowse/etc/gbrowse/languages/pl.pm
Installing debian/gbrowse/etc/gbrowse/languages/POSIX.pm
Installing debian/gbrowse/etc/gbrowse/languages/ru.pm
Installing debian/gbrowse/etc/gbrowse/languages/zh.pm
Installing debian/gbrowse/etc/gbrowse/languages/zh_cn.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/b64_encoded_gif_renderer.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/b64_encoded_jpeg_renderer.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/GbrowseServices.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/GbrowseServices.PMS
Installing debian/gbrowse/etc/gbrowse/MobyServices/moby.conf
Installing debian/gbrowse/etc/gbrowse/MobyServices/text_formatted_renderer.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/text_html_renderer.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/text_plain_renderer.pm
Installing debian/gbrowse/etc/gbrowse/MobyServices/text_xml_renderer.pm
Installing debian/gbrowse/etc/gbrowse/plugins/Aligner.pm
Installing debian/gbrowse/etc/gbrowse/plugins/AlignTwoSequences.pm
Installing debian/gbrowse/etc/gbrowse/plugins/AttributeHiliter.pm
Installing debian/gbrowse/etc/gbrowse/plugins/BatchDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/Blat.pm
Installing debian/gbrowse/etc/gbrowse/plugins/CMapDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/CreateBlastDB.pm
Installing debian/gbrowse/etc/gbrowse/plugins/FastaDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/FBTableDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/FilterTest.pm
Installing debian/gbrowse/etc/gbrowse/plugins/GeneFinder.pm
Installing debian/gbrowse/etc/gbrowse/plugins/LDAPAuthenticate.pm
Installing debian/gbrowse/etc/gbrowse/plugins/OligoFinder.pm
Installing debian/gbrowse/etc/gbrowse/plugins/PamAuthenticate.pm
Installing debian/gbrowse/etc/gbrowse/plugins/PrimerDesigner.pm
Installing debian/gbrowse/etc/gbrowse/plugins/ProteinDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/RandomGene.pm
Installing debian/gbrowse/etc/gbrowse/plugins/RestrictionAnnotator.pm
Installing debian/gbrowse/etc/gbrowse/plugins/SequenceDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/SimpleTrackFinder.pm
Installing debian/gbrowse/etc/gbrowse/plugins/SinWave.pm
Installing debian/gbrowse/etc/gbrowse/plugins/SourceTrackFinder.pm
Installing debian/gbrowse/etc/gbrowse/plugins/Spectrogram.pm
Installing debian/gbrowse/etc/gbrowse/plugins/Submitter.pm
Installing debian/gbrowse/etc/gbrowse/plugins/test.pm
Installing debian/gbrowse/etc/gbrowse/plugins/TestAuthenticator.pm
Installing debian/gbrowse/etc/gbrowse/plugins/TestFinder.pm
Installing debian/gbrowse/etc/gbrowse/plugins/TrackDumper.pm
Installing debian/gbrowse/etc/gbrowse/plugins/TrackFinder.pm
Installing debian/gbrowse/etc/gbrowse/synteny/oryza.synconf.disabled
Installing debian/gbrowse/etc/gbrowse/synteny/rice_synteny.conf
Installing debian/gbrowse/etc/gbrowse/synteny/wild_rice_synteny.conf
Installing debian/gbrowse/etc/gbrowse/themes/solid_gray_colors
Installing debian/gbrowse/etc/gbrowse/themes/transparent_colors
Installing debian/gbrowse/etc/gbrowse/themes/warm_colors
Installing debian/gbrowse/var/lib/gbrowse/databases/admin_uploads/README
Installing debian/gbrowse/var/lib/gbrowse/databases/gbrowse_syn/alignments/rice.aln.gz
Installing debian/gbrowse/var/lib/gbrowse/databases/gbrowse_syn/rice/rice.gff3
Installing debian/gbrowse/var/lib/gbrowse/databases/gbrowse_syn/wild_rice/wild_rice.gff3
Installing debian/gbrowse/var/lib/gbrowse/databases/ideograms/human_cytobands.gff
Installing debian/gbrowse/var/lib/gbrowse/databases/ideograms/mouse_cytobands.gff
Installing debian/gbrowse/var/lib/gbrowse/databases/ideograms/rat_cytobands.gff
Installing debian/gbrowse/var/lib/gbrowse/databases/pop_demo/pop_demo.gff3
Installing debian/gbrowse/var/lib/gbrowse/databases/yeast_chr1+2/yeast_chr1+2.gff3
Installing debian/gbrowse/var/lib/gbrowse/databases/yeast_scaffolds/chr1.fa
Installing debian/gbrowse/var/lib/gbrowse/databases/yeast_scaffolds/chr2.fa
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Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox7.gff
Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox8.gff
Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox9.gff
Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox_all.gff
Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/figures/adding_dna_to_alignments1.gif
Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/figures/aliases.gif
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Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/figures/custom_aggregators1.gif
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Installing debian/gbrowse/usr/share/gbrowse/htdocs/tutorial/figures/wiggle_density.png
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Karyotype.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/GBrowseFeature.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/SubtrackTable.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/GFFhelper.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/PadAlignment.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Region.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/I18n.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataSource.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/RemoteSet.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Session.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/UserTracks.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/OptionPick.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Shellwords.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Action.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/AuthorizedFeatureFile.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/RenderPanels.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/UserDB.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataBase.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/RegionSearch.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Plugin.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/CachedTrack.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Util.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/TrackDumper.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/PluginSet.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/SendMail.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Markup.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Realign.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/ExternalData.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/CAlign.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/bam.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/generic.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/sam.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/bed.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/gff3.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/bigwig.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/featurefile.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/wig2bigwig.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/wiggle.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/DataLoader/gff.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/Login.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/TrackConfig.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/Slave.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/HTML.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/SnapshotManager.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/HTML/TrackListing.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/HTML/TrackListing/Categories.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Render/Slave/Status.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/Plugin/AuthPlugin.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/UserTracks/Database.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/UserTracks/Filesystem.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/Graphics/Browser2/TrackDumper/RichSeqMaker.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/Tagger.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/Tagger/Tag.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/Tagger/mysql.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/GFF/Aggregator/wormbase_gene.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/GFF/Aggregator/match_gap.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/GFF/Aggregator/reftranscript.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/GFF/Aggregator/waba_alignment.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/SeqFeature/Store/Alias.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Bio/DB/SeqFeature/Store/BedLoader.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/DB/SyntenyIO.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/DB/SyntenyBlock.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/Graphics/Browser.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/Graphics/Browser/Synteny.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/Graphics/Browser/PageSettings.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/Graphics/Browser/Util.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/Legacy/Graphics/Browser/I18n.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/CGI/Toggle.pm
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/GBrowse/ConfigData.pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::CAlign.3pm
Installing debian/gbrowse/man/man3/CGI::Toggle.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Plugin::AuthPlugin.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::RemoteSet.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::GFFhelper.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Markup.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::DataSource.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::PadAlignment.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Render.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Util.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::OptionPick.3pm
Installing debian/gbrowse/man/man3/GBrowse::ConfigData.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::RegionSearch.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Realign.3pm
Installing debian/gbrowse/man/man3/Bio::DB::SeqFeature::Store::Alias.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::AuthorizedFeatureFile.3pm
Installing debian/gbrowse/man/man3/Legacy::Graphics::Browser.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::RenderPanels.3pm
Installing debian/gbrowse/man/man3/Bio::DB::Tagger.3pm
Installing debian/gbrowse/man/man3/Bio::DB::GFF::Aggregator::match_gap.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::PluginSet.3pm
Installing debian/gbrowse/man/man3/Bio::DB::GFF::Aggregator::waba_alignment.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::DataBase.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Plugin.3pm
Installing debian/gbrowse/man/man3/Bio::DB::Tagger::Tag.3pm
Installing debian/gbrowse/man/man3/Bio::DB::GFF::Aggregator::wormbase_gene.3pm
Installing debian/gbrowse/man/man3/Bio::Graphics::Browser2::Region.3pm
Installing debian/gbrowse/man/man3/Bio::DB::GFF::Aggregator::reftranscript.3pm
Installing debian/gbrowse/bin/gbrowse_syn_load_alignment_database.pl
Installing debian/gbrowse/bin/make_das_conf.pl
Installing debian/gbrowse/bin/gbrowse_launch_aws_slaves.pl
Installing debian/gbrowse/bin/gbrowse_metadb_config.pl
Installing debian/gbrowse/bin/gtf2gff3.pl
Installing debian/gbrowse/bin/gbrowse_clean.pl
Installing debian/gbrowse/bin/gbrowse_slave
Installing debian/gbrowse/bin/gbrowse_grow_cloud_vol.pl
Installing debian/gbrowse/bin/load_genbank.pl
Installing debian/gbrowse/bin/scan_gbrowse.pl
Installing debian/gbrowse/bin/gbrowse_set_admin_passwd.pl
Installing debian/gbrowse/bin/bed2gff3.pl
Installing debian/gbrowse/bin/gbrowse_change_passwd.pl
Installing debian/gbrowse/bin/gbrowse_syn_load_alignments_msa.pl
Installing debian/gbrowse/bin/gbrowse_import_ucsc_db.pl
Installing debian/gbrowse/bin/gbrowse_create_account.pl
Installing debian/gbrowse/bin/gbrowse_configure_slaves.pl
Installing debian/gbrowse/bin/wiggle2gff3.pl
Installing debian/gbrowse/bin/ucsc_genes2gff.pl
#./Build apache_conf > debian/gbrowse/etc/gbrowse/gbrowse_apache2.conf
perl Build.PL --conf=/etc/gbrowse --htdocs=/usr/share/gbrowse/htdocs --tmp=/var/cache/gbrowse --databases=/var/lib/gbrowse/databases --cgibin=/usr/lib/cgi-bin/gbrowse --www-user=www-data --registration_done=1 --persistent=/var/lib/gbrowse --installetc=y
Possible precedence issue with control flow operator at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 1032.
Checking prerequisites...
recommends:
* Bio::DB::BigFile is not installed
* Bio::DB::Sam is not installed
* Bio::Das is not installed
* Crypt::SSLeay is not installed
* DBD::Pg is not installed
* DBD::mysql is not installed
* DB_File::Lock is not installed
* FCGI is not installed
* File::NFSLock is not installed
* GD::SVG is not installed
* Net::OpenID::Consumer is not installed
* Net::SMTP::SSL is not installed
* Parse::Apache::ServerStatus is not installed
* Template is not installed
* Do not worry if some "recommended" prerequisites are missing. You can install *
* them later if you need the features they provide. Do not proceed with the *
* install if any of "REQUIRED" prerequisites are missing. *
* *
* The optional Safe::World module does not currently run on Perl 5.10 or *
* higher, and so cannot be installed. *
ERRORS/WARNINGS FOUND IN PREREQUISITES. You may wish to install the versions
of the modules indicated above before proceeding with this installation
Run 'Build installdeps' to install missing prerequisites.
**** WARNING *****************************************************************************************
If you are upgrading from an earlier version of GBrowse and wish to use named user accounts, please
set "user_accounts" to 1 in /etc/gbrowse2/GBrowse.conf and run bin/gbrowse_metadb_config.pl to
create/update your user account database.
See /etc/gbrowse2/GBrowse.conf.new for suggested settings.
******************************************************************************************************
NOTE: Run ./Build reconfig to change existing configuration.
Now run:
./Build test
./Build demo (optional)
./Build install (as superuser/administrator)
-or-
./Build install_slave (optional, for slave installations)
Other useful targets:
./Build register (to register your copy of GBrowse)
./Build reconfig (to reconfigure install locations)
./Build demostop (to stop the demo)
Created MYMETA.yml and MYMETA.json
Creating new 'Build' script for 'GBrowse' version '2.54'
./Build --install_base=debian/gbrowse install_slave
Possible precedence issue with control flow operator at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 1032.
NOTE: Run ./Build reconfig to change existing configuration.
Performing variable substitutions in blib/conf/detail_select_menu.conf
Performing variable substitutions in blib/conf/enzymes.txt
Performing variable substitutions in blib/conf/GBrowse.conf
Performing variable substitutions in blib/conf/log4perl.conf
Performing variable substitutions in blib/conf/MobyServices/moby.conf
Performing variable substitutions in blib/conf/pop_demo.conf
Performing variable substitutions in blib/conf/renderfarm.conf
Performing variable substitutions in blib/conf/slave_preload.conf
Performing variable substitutions in blib/conf/submitter_plugin.conf
Performing variable substitutions in blib/conf/synteny/rice_synteny.conf
Performing variable substitutions in blib/conf/synteny/wild_rice_synteny.conf
Performing variable substitutions in blib/conf/themes/solid_gray_colors
Performing variable substitutions in blib/conf/themes/transparent_colors
Performing variable substitutions in blib/conf/themes/warm_colors
Performing variable substitutions in blib/conf/volvox.conf
Performing variable substitutions in blib/conf/yeast_chr1+2.conf
Performing variable substitutions in blib/conf/yeast_renderfarm.conf
Performing variable substitutions in blib/conf/yeast_simple.conf
Performing variable substitutions in blib/htdocs/annotation_help.html
Performing variable substitutions in blib/htdocs/cloud_index.html
Performing variable substitutions in blib/htdocs/example_scripts/index.html
Performing variable substitutions in blib/htdocs/example_scripts/README
Performing variable substitutions in blib/htdocs/gbrowse_karyotype_help.html
Performing variable substitutions in blib/htdocs/gbrowse_syn_help.html
Performing variable substitutions in blib/htdocs/general_help.html
Performing variable substitutions in blib/htdocs/index.html
Performing variable substitutions in blib/htdocs/tutorial/conf_files/elegans_core.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/elegans_extra.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/HEADER.html
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_final.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_final_withPhylo.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_halfway.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_Phylo.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_quarter.conf
Performing variable substitutions in blib/htdocs/tutorial/conf_files/volvox_refactored.conf
Performing variable substitutions in blib/htdocs/tutorial/data_files/HEADER.html
Performing variable substitutions in blib/htdocs/tutorial/tutorial.html
Performing variable substitutions in blib/htdocs/tutorial/tutorial.phyTreeEdit.html
Performing variable substitutions in blib/htdocs/vbox_index.html
Performing variable substitutions in blib/etc/default/gbrowse-slave
Performing variable substitutions in blib/etc/init.d/gbrowse-slave
Use of uninitialized value $wwwuser in substitution (s///) at /«BUILDDIR»/gbrowse-2.54+dfsg/install_util/GBrowseInstall.pm line 821, <GEN89> line 20.
Building GBrowse
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing debian/gbrowse/etc/default/gbrowse-slave
Installing debian/gbrowse/etc/init.d/gbrowse-slave
Installing debian/gbrowse/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/GBrowse/ConfigData.pm
mv debian/gbrowse/lib/perl5/* debian/gbrowse/usr/share/perl5
# Remove arch dependant data
mv debian/gbrowse/usr/share/perl5/auto/Bio/Graphics/Browser2/CAlign/* debian/gbrowse-calign/usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/Graphics/Browser2/CAlign/
mv debian/gbrowse/usr/share/perl5/Bio/Graphics/Browser2/CAlign.pm debian/gbrowse-calign/usr/lib/arm-linux-gnueabihf/perl5/5.20/Bio/Graphics/Browser2/CAlign.pm
rm -rf debian/gbrowse/lib
rm -f debian/gbrowse/usr/share/doc/gbrowse/INSTALL
rm -f debian/gbrowse/usr/share/perl5/auto/GBrowse/.packlist
rm -f debian/gbrowse/usr/share/gbrowse/htdocs/js/prototype.js
rm -f debian/gbrowse/usr/share/gbrowse/htdocs/js/scriptaculous.js
chmod 644 debian/gbrowse/etc/gbrowse/MobyServices/text_xml_renderer.pm
chmod 644 debian/gbrowse/etc/gbrowse/synteny/oryza.synconf.disabled
#Remove database (kept as separate package)
rm -rf debian/gbrowse/var/lib/gbrowse/databases/*
#Rename pl scripts in bin
rename 's/\.pl//' debian/gbrowse/bin/*.pl
mv debian/gbrowse/bin debian/gbrowse/usr/bin
# Activate configuration files.
find /«BUILDDIR»/gbrowse-2.54+dfsg/debian/gbrowse/etc -name '*.new' | xargs rename 's/.new//'
rm -rf /«BUILDDIR»/gbrowse-2.54+dfsg/debian/gbrowse/usr/share/perl5/auto
# Update conf files
sed -i 's/gbrowse2/gbrowse/g' /«BUILDDIR»/gbrowse-2.54+dfsg/debian/gbrowse/etc/gbrowse/yeast*.conf
sed -i 's/gbrowse2/gbrowse/g' /«BUILDDIR»/gbrowse-2.54+dfsg/debian/gbrowse/etc/gbrowse/slave*.conf
make[1]: Leaving directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
dh_apache2 -a
dh_installdocs -a
dh_installchangelogs -a
debian/rules override_dh_installman
make[1]: Entering directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
#Rename due to perl extension seen as polish
rename 's/\.pl\.1p/\.1p/' debian/gbrowse/man/man1/*.pl.1p
mkdir -p debian/gbrowse-calign/man/man3/
mv debian/gbrowse/man/man3/Bio::Graphics::Browser2::CAlign.3pm debian/gbrowse-calign/man/man3/Bio::Graphics::Browser2::CAlign.3pm
dh_installman
rm -rf debian/gbrowse/man
rm -rf debian/gbrowse-calign/man
make[1]: Leaving directory '/«BUILDDIR»/gbrowse-2.54+dfsg'
dh_perl -a
dh_link -a
dh_compress -a
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package gbrowse-calign: unused substitution variable ${misc:Pre-Depends}
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package `gbrowse-calign' in `../gbrowse-calign_2.54+dfsg-3+b1_armhf.deb'.
dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../gbrowse_2.54+dfsg-3+b1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build gbrowse-2.54+dfsg
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20140901-0750
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
gbrowse_2.54+dfsg-3+b1_armhf.changes:
─────────────────────────────────────
Format: 1.8
Date: Mon, 30 Jun 2014 23:07:52 +0200
Source: gbrowse (2.54+dfsg-3)
Binary: gbrowse gbrowse-data gbrowse-calign
Binary-Only: yes
Architecture: armhf
Version: 2.54+dfsg-3+b1
Distribution: jessie-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Description:
gbrowse - GMOD Generic Genome Browser
gbrowse-calign - CAlign helper
gbrowse-data - Sample data to use GBrowse
Changes:
gbrowse (2.54+dfsg-3+b1) jessie-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
f64c4fae23e6233bdb40a9c729b5d179a2c1b355 34226 gbrowse-calign_2.54+dfsg-3+b1_armhf.deb
Checksums-Sha256:
dcc7fbe27ece98d9eab4df760228d9f4cf4c8a32957e0d3f1b1df7811af9355c 34226 gbrowse-calign_2.54+dfsg-3+b1_armhf.deb
Files:
db105a2d7e6862b12ac6b650a40b118f 34226 science optional gbrowse-calign_2.54+dfsg-3+b1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
gbrowse-calign_2.54+dfsg-3+b1_armhf.deb
───────────────────────────────────────
new debian package, version 2.0.
size 34226 bytes: control archive=854 bytes.
471 bytes, 13 lines control
752 bytes, 8 lines md5sums
Package: gbrowse-calign
Source: gbrowse (2.54+dfsg-3)
Version: 2.54+dfsg-3+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 51
Depends: perl (>= 5.20.0-4), perlapi-5.20.0, libc6 (>= 2.4), gbrowse
Section: science
Priority: optional
Homepage: http://www.gbrowse.org/
Description: CAlign helper
This package provides the CAlign helper
for use with Realign. It speeds up Smith-Waterman alignment.
drwxr-xr-x root/root 0 2014-09-01 07:50 ./
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/Graphics/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/Graphics/Browser2/
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/Graphics/Browser2/CAlign/
-rw-r--r-- root/root 0 2014-09-01 07:48 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/Graphics/Browser2/CAlign/CAlign.bs
-rw-r--r-- root/root 9548 2014-09-01 07:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/Bio/Graphics/Browser2/CAlign/CAlign.so
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/Bio/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/Bio/Graphics/
drwxr-xr-x root/root 0 2014-09-01 07:49 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/Bio/Graphics/Browser2/
-rw-r--r-- root/root 1129 2014-09-01 07:47 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/Bio/Graphics/Browser2/CAlign.pm
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/share/
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/share/doc/
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/share/doc/gbrowse-calign/
-rw-r--r-- root/root 18223 2014-07-09 15:11 ./usr/share/doc/gbrowse-calign/copyright
-rw-r--r-- root/root 1265 2014-09-01 07:47 ./usr/share/doc/gbrowse-calign/changelog.Debian.gz
-rw-r--r-- root/root 226 2014-09-01 07:47 ./usr/share/doc/gbrowse-calign/changelog.Debian.armhf.gz
-rw-r--r-- root/root 18924 2012-12-11 15:44 ./usr/share/doc/gbrowse-calign/changelog.gz
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/share/man/
drwxr-xr-x root/root 0 2014-09-01 07:50 ./usr/share/man/man3/
-rw-r--r-- root/root 2161 2014-09-01 07:50 ./usr/share/man/man3/Bio::Graphics::Browser2::CAlign.3pm.gz
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 31444
Build-Time: 165
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 500
Job: gbrowse_2.54+dfsg-3
Machine Architecture: armhf
Package: gbrowse
Package-Time: 725
Source-Version: 2.54+dfsg-3
Space: 31444
Status: successful
Version: 2.54+dfsg-3+b1
────────────────────────────────────────────────────────────────────────────────
Finished at 20140901-0750
Build needed 00:12:05, 31444k disc space