density-fitness ā
1.0.0-1 ā
armhf ā 2020-12-20 23:24:48
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| density-fitness 1.0.0-1 (armhf) Sun, 20 Dec 2020 23:08:03 +0000 |
+==============================================================================+
Package: density-fitness
Version: 1.0.0-1
Source Version: 1.0.0-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-1dd9a08c-cf1b-4cc9-b8da-c098f64bc1be' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.0 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 25.0 MB in 24s (1021 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'density-fitness' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/density-fitness.git
Please use:
git clone https://salsa.debian.org/med-team/density-fitness.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 102 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main density-fitness 1.0.0-1 (dsc) [2275 B]
Get:2 http://172.17.0.1/private bullseye-staging/main density-fitness 1.0.0-1 (tar) [96.7 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main density-fitness 1.0.0-1 (diff) [3440 B]
Fetched 102 kB in 0s (827 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/density-fitness-7zXnMA/density-fitness-1.0.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/density-fitness-7zXnMA' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-zRwgHx/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-zRwgHx/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-zRwgHx/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (2560 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libnss-nis libnss-nisplus netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 21 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12757 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), libboost-iostreams-dev, libboost-program-options-dev, libcifpp-dev, libpdb-redo-dev, libzeep-dev, autoconf-archive, libgsl-dev, libclipper-dev, libnewuoa-dev, pkg-config
Filtered Build-Depends: debhelper-compat (= 13), libboost-iostreams-dev, libboost-program-options-dev, libcifpp-dev, libpdb-redo-dev, libzeep-dev, autoconf-archive, libgsl-dev, libclipper-dev, libnewuoa-dev, pkg-config
dpkg-deb: building package 'sbuild-build-depends-density-fitness-dummy' in '/<<BUILDDIR>>/resolver-zRwgHx/apt_archive/sbuild-build-depends-density-fitness-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-density-fitness-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Sources [579 B]
Get:5 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ Packages [658 B]
Fetched 2570 B in 1s (3407 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install density-fitness build dependencies (apt-based resolver)
---------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libnss-nis libnss-nisplus netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf autoconf-archive automake autopoint autotools-dev cpp-10 debhelper
dh-autoreconf dh-strip-nondeterminism dwz fftw-dev fftw2 file g++-10 gcc-10
gcc-10-base gettext gettext-base groff-base icu-devtools intltool-debian
libarchive-zip-perl libasan6 libatomic1 libboost-date-time-dev
libboost-date-time1.74-dev libboost-date-time1.74.0 libboost-dev
libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0
libboost-program-options-dev libboost-program-options1.74-dev
libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0
libboost-serialization1.74-dev libboost-serialization1.74.0
libboost-system-dev libboost-system1.74-dev libboost-system1.74.0
libboost1.74-dev libbsd0 libcc1-0 libccp4-data libccp4-dev libccp4c0
libccp4f0 libcifpp-dev libcifpp1 libclipper-dev libclipper2 libcroco3
libdebhelper-perl libelf1 libevent-core-2.1-7 libevent-pthreads-2.1-7
libfile-stripnondeterminism-perl libgcc-10-dev libgcc-s1 libgfortran5
libglib2.0-0 libgomp1 libgsl-dev libgsl25 libgslcblas0 libhwloc-plugins
libhwloc15 libibverbs1 libicu-dev libicu67 libmagic-mgc libmagic1 libmmdb2-0
libmmdb2-dev libnewuoa-dev libnewuoa0 libnl-3-200 libnl-route-3-200
libopenmpi3 libpciaccess0 libpdb-redo-dev libpdb-redo1 libpipeline1 libpmix2
libsigsegv2 libstdc++-10-dev libstdc++6 libsub-override-perl libtool
libubsan1 libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6
libxext6 libxml2 libxnvctrl0 libzeep-dev libzeep5 m4 man-db
ocl-icd-libopencl1 pkg-config po-debconf sfftw-dev sfftw2
Suggested packages:
gnu-standards autoconf-doc gcc-10-locales dh-make mpi-defaults-bin
gcc-10-doc gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc
libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev
libboost-container1.74-dev libboost-context1.74-dev
libboost-contract1.74-dev libboost-coroutine1.74-dev
libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev
libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev
libboost-numpy1.74-dev libboost-python1.74-dev libboost-random1.74-dev
libboost-stacktrace1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
libclipper-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html
icu-doc pciutils libstdc++-10-doc libtool-doc gfortran | fortran95-compiler
gcj-jdk libzeep-doc mrc m4-doc apparmor less www-browser opencl-icd
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs ibverbs-providers libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf autoconf-archive automake autopoint autotools-dev debhelper
dh-autoreconf dh-strip-nondeterminism dwz fftw-dev fftw2 file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libboost-date-time-dev libboost-date-time1.74-dev libboost-date-time1.74.0
libboost-dev libboost-iostreams-dev libboost-iostreams1.74-dev
libboost-iostreams1.74.0 libboost-program-options-dev
libboost-program-options1.74-dev libboost-program-options1.74.0
libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev
libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev
libboost-system1.74.0 libboost1.74-dev libbsd0 libccp4-data libccp4-dev
libccp4c0 libccp4f0 libcifpp-dev libcifpp1 libclipper-dev libclipper2
libcroco3 libdebhelper-perl libelf1 libevent-core-2.1-7
libevent-pthreads-2.1-7 libfile-stripnondeterminism-perl libgfortran5
libglib2.0-0 libgsl-dev libgsl25 libgslcblas0 libhwloc-plugins libhwloc15
libibverbs1 libicu-dev libicu67 libmagic-mgc libmagic1 libmmdb2-0
libmmdb2-dev libnewuoa-dev libnewuoa0 libnl-3-200 libnl-route-3-200
libopenmpi3 libpciaccess0 libpdb-redo-dev libpdb-redo1 libpipeline1 libpmix2
libsigsegv2 libsub-override-perl libtool libuchardet0 libx11-6 libx11-data
libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 libzeep-dev libzeep5
m4 man-db ocl-icd-libopencl1 pkg-config po-debconf
sbuild-build-depends-density-fitness-dummy sfftw-dev sfftw2
The following packages will be upgraded:
cpp-10 g++-10 gcc-10 gcc-10-base libasan6 libatomic1 libcc1-0 libgcc-10-dev
libgcc-s1 libgomp1 libstdc++-10-dev libstdc++6 libubsan1
13 upgraded, 97 newly installed, 0 to remove and 8 not upgraded.
Need to get 188 MB of archives.
After this operation, 353 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zRwgHx/apt_archive ./ sbuild-build-depends-density-fitness-dummy 0.invalid.0 [948 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.2.1-1+rpi1 [38.3 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.2.1-1+rpi1 [201 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.2.1-1+rpi1 [36.2 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.2.1-1+rpi1 [84.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.2.1-1+rpi1 [8192 B]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libasan6 armhf 10.2.1-1+rpi1 [1986 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.2.1-1+rpi1 [746 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf g++-10 armhf 10.2.1-1+rpi1 [41.4 MB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-10-dev armhf 10.2.1-1+rpi1 [1752 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libgcc-10-dev armhf 10.2.1-1+rpi1 [682 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf gcc-10 armhf 10.2.1-1+rpi1 [44.4 MB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf cpp-10 armhf 10.2.1-1+rpi1 [38.5 MB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.2.1-1+rpi1 [408 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf autoconf-archive all 20190106-2.1 [746 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-12 [313 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3 [188 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20201015-2 [162 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-5 [8288 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3 [1009 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-5 [172 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libboost1.74-dev armhf 1.74.0-3 [9532 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.74.0 armhf 1.74.0-3 [241 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.74.0 armhf 1.74.0-3 [319 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.74-dev armhf 1.74.0-3 [388 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.74-dev armhf 1.74.0-3 [250 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time-dev armhf 1.74.0.3 [4332 B]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.74.0.3 [4548 B]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.74.0 armhf 1.74.0-3 [447 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-5 [9227 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.74-dev armhf 1.74.0-3 [553 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0-3 [259 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.74-dev armhf 1.74.0-3 [269 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams-dev armhf 1.74.0.3 [4316 B]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libboost-program-options1.74.0 armhf 1.74.0-3 [334 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libboost-program-options1.74-dev armhf 1.74.0-3 [374 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libboost-program-options-dev armhf 1.74.0.3 [4340 B]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.74.0 armhf 1.74.0-3 [241 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.74-dev armhf 1.74.0-3 [242 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libboost-system-dev armhf 1.74.0.3 [4468 B]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libccp4-data all 6.5.1-4 [61.7 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libccp4c0 armhf 6.5.1-4 [73.8 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.1-1+rpi1 [231 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libmmdb2-0 armhf 2.0.5-1 [264 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libccp4f0 armhf 6.5.1-4 [202 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libccp4-dev armhf 6.5.1-4 [42.7 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libcifpp1 armhf 1.0.1-2 [1315 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libcifpp-dev armhf 1.0.1-2 [65.0 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-7 armhf 2.1.12-stable-1 [126 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.12-stable-1 [56.8 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libhwloc15 armhf 2.4.0+dfsg-2 [122 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 32.0-1+b1 [52.3 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.16-1 [51.0 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.12-1 [311 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.12-1 [700 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libxnvctrl0 armhf 450.80.02-1 [25.3 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.13-1 [36.5 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 2.4.0+dfsg-2 [19.5 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.2.2~rc1-1 [369 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 4.0.5-7+rpi1 [1582 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf fftw2 armhf 2.1.5-4.2+b2 [244 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf fftw-dev armhf 2.1.5-4.2+b2 [264 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf sfftw2 armhf 2.1.5-4.2+b2 [229 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libclipper2 armhf 2.1.20201109-1 [1069 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libmmdb2-dev armhf 2.0.5-1 [91.9 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf sfftw-dev armhf 2.1.5-4.2+b2 [250 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libclipper-dev armhf 2.1.20201109-1 [82.6 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.6+dfsg-2 [79.5 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libgsl25 armhf 2.6+dfsg-2 [753 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libgsl-dev armhf 2.6+dfsg-2 [950 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libnewuoa0 armhf 0.1.1-2 [16.4 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libnewuoa-dev armhf 0.1.1-2 [4916 B]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libzeep5 armhf 5.0.2-3 [554 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libpdb-redo1 armhf 1.0.1-2 [3163 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libpdb-redo-dev armhf 1.0.1-2 [621 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libzeep-dev armhf 5.0.2-3 [1018 kB]
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Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up libboost-system1.74.0:armhf (1.74.0-3) ...
Setting up libpciaccess0:armhf (0.16-1) ...
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No schema files found: doing nothing.
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Setting up libmagic1:armhf (1:5.39-3) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up autoconf-archive (20190106-2.1) ...
Setting up file (1:5.39-3) ...
Setting up libccp4-data (6.5.1-4) ...
Setting up libnewuoa0 (0.1.1-2) ...
Setting up libgomp1:armhf (10.2.1-1+rpi1) ...
Setting up libasan6:armhf (10.2.1-1+rpi1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libx11-data (2:1.6.12-1) ...
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Setting up icu-devtools (67.1-5) ...
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Setting up pkg-config (0.29.2-1) ...
Setting up libccp4c0:armhf (6.5.1-4) ...
Setting up libgfortran5:armhf (10.2.1-1+rpi1) ...
Setting up libubsan1:armhf (10.2.1-1+rpi1) ...
Setting up libboost-serialization1.74.0:armhf (1.74.0-3) ...
Setting up libcifpp1 (1.0.1-2) ...
Setting up ocl-icd-libopencl1:armhf (2.2.13-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libnl-3-200:armhf (3.4.0-1) ...
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Setting up libbsd0:armhf (0.10.0-1) ...
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Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
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Setting up cpp-10 (10.2.1-1+rpi1) ...
Setting up libevent-pthreads-2.1-7:armhf (2.1.12-stable-1) ...
Setting up libccp4f0:armhf (6.5.1-4) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
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Setting up libxcb1:armhf (1.14-2) ...
Setting up libgsl-dev (2.6+dfsg-2) ...
Setting up libccp4-dev:armhf (6.5.1-4) ...
Setting up libtool (2.4.6-14) ...
Setting up libnewuoa-dev (0.1.1-2) ...
Setting up libgcc-10-dev:armhf (10.2.1-1+rpi1) ...
Setting up m4 (1.4.18-4) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up gcc-10 (10.2.1-1+rpi1) ...
Setting up autoconf (2.69-12) ...
Setting up libcifpp-dev (1.0.1-2) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13+20201015-2) ...
Setting up groff-base (1.22.4-5) ...
Setting up libx11-6:armhf (2:1.6.12-1) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libibverbs1:armhf (32.0-1+b1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up libstdc++-10-dev:armhf (10.2.1-1+rpi1) ...
Setting up libboost1.74-dev:armhf (1.74.0-3) ...
Setting up g++-10 (10.2.1-1+rpi1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libboost-program-options1.74-dev:armhf (1.74.0-3) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxnvctrl0:armhf (450.80.02-1) ...
Setting up libboost-program-options-dev:armhf (1.74.0.3) ...
Setting up libboost-system1.74-dev:armhf (1.74.0-3) ...
Setting up libboost-serialization1.74-dev:armhf (1.74.0-3) ...
Setting up libboost-regex1.74-dev:armhf (1.74.0-3) ...
Setting up libboost-dev:armhf (1.74.0.3) ...
Setting up po-debconf (1.0.21) ...
Setting up libboost-system-dev:armhf (1.74.0.3) ...
Setting up libhwloc-plugins:armhf (2.4.0+dfsg-2) ...
Setting up libboost-iostreams1.74-dev:armhf (1.74.0-3) ...
Setting up libboost-date-time1.74-dev:armhf (1.74.0-3) ...
Setting up libboost-date-time-dev:armhf (1.74.0.3) ...
Setting up libpmix2:armhf (3.2.2~rc1-1) ...
Setting up libopenmpi3:armhf (4.0.5-7+rpi1) ...
Setting up sfftw2 (2.1.5-4.2+b2) ...
Setting up libboost-iostreams-dev:armhf (1.74.0.3) ...
Setting up fftw2 (2.1.5-4.2+b2) ...
Setting up sfftw-dev (2.1.5-4.2+b2) ...
Setting up libzeep-dev (5.0.2-3) ...
Setting up libclipper2:armhf (2.1.20201109-1) ...
Setting up fftw-dev (2.1.5-4.2+b2) ...
Setting up libclipper-dev:armhf (2.1.20201109-1) ...
Setting up libpdb-redo1 (1.0.1-2) ...
Setting up libpdb-redo-dev (1.0.1-2) ...
Setting up debhelper (13.3) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-density-fitness-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-4+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.1-1+rpi1 gcc-10_10.2.1-1+rpi1 libc6-dev_2.31-5+rpi1 libstdc++-10-dev_10.2.1-1+rpi1 libstdc++6_10.2.1-1+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-12 autoconf-archive_20190106-2.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc3-1 binutils_2.35.1-4+rpi1 binutils-arm-linux-gnueabihf_2.35.1-4+rpi1 binutils-common_2.35.1-4+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.1-1+rpi1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.3 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 fftw-dev_2.1.5-4.2+b2 fftw2_2.1.5-4.2+b2 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.1-1+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.1-1+rpi1 gcc-10-base_10.2.1-1+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-5+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_67.1-5 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 krb5-locales_1.18.3-4 libacl1_2.2.53-8 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libasan6_10.2.1-1+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbinutils_2.35.1-4+rpi1 libblkid1_2.36.1-2 libboost-date-time-dev_1.74.0.3 libboost-date-time1.74-dev_1.74.0-3 libboost-date-time1.74.0_1.74.0-3 libboost-dev_1.74.0.3 libboost-iostreams-dev_1.74.0.3 libboost-iostreams1.71.0_1.71.0-7+b1 libboost-iostreams1.74-dev_1.74.0-3 libboost-iostreams1.74.0_1.74.0-3 libboost-program-options-dev_1.74.0.3 libboost-program-options1.74-dev_1.74.0-3 libboost-program-options1.74.0_1.74.0-3 libboost-regex1.74-dev_1.74.0-3 libboost-regex1.74.0_1.74.0-3 libboost-serialization1.74-dev_1.74.0-3 libboost-serialization1.74.0_1.74.0-3 libboost-system-dev_1.74.0.3 libboost-system1.74-dev_1.74.0-3 libboost-system1.74.0_1.74.0-3 libboost1.74-dev_1.74.0-3 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-5+rpi1 libc6_2.31-5+rpi1 libc6-dev_2.31-5+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-1+rpi1 libccp4-data_6.5.1-4 libccp4-dev_6.5.1-4 libccp4c0_6.5.1-4 libccp4f0_6.5.1-4 libcifpp-dev_1.0.1-2 libcifpp1_1.0.1-2 libclipper-dev_2.1.20201109-1 libclipper2_2.1.20201109-1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-4+rpi1 libctf0_2.35.1-4+rpi1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.3 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libevent-core-2.1-7_2.1.12-stable-1 libevent-pthreads-2.1-7_2.1.12-stable-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.1-1+rpi1 libgcc-s1_10.2.1-1+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.1-1+rpi1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.1-1+rpi1 libgpg-error0_1.38-2 libgsl-dev_2.6+dfsg-2 libgsl25_2.6+dfsg-2 libgslcblas0_2.6+dfsg-2 libgssapi-krb5-2_1.18.3-4 libhogweed6_3.6-2 libhwloc-plugins_2.4.0+dfsg-2 libhwloc15_2.4.0+dfsg-2 libibverbs1_32.0-1+b1 libicu-dev_67.1-5 libicu67_67.1-5 libidn2-0_2.3.0-4 libisl23_0.23-1 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmmdb2-0_2.0.5-1 libmmdb2-dev_2.0.5-1 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnewuoa-dev_0.1.1-2 libnewuoa0_0.1.1-2 libnl-3-200_3.4.0-1 libnl-route-3-200_3.4.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libopenmpi3_4.0.5-7+rpi1 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpciaccess0_0.16-1 libpcre2-8-0_10.35-2 libpcre3_2:8.39-13 libpdb-redo-dev_1.0.1-2 libpdb-redo1_1.0.1-2 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libpmix2_3.2.2~rc1-1 libreadline8_8.1~rc3-1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsmartcols1_2.36.1-2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.1-1+rpi1 libstdc++6_10.2.1-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-4+rpi1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.1-1+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libx11-6_2:1.6.12-1 libx11-data_2:1.6.12-1 libxapian30_1.4.17-1 libxau6_1:1.0.8-1+b2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxml2_2.9.10+dfsg-6.3 libxnvctrl0_450.80.02-1 libzeep-dev_5.0.2-3 libzeep5_5.0.2-3 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 ocl-icd-libopencl1_2.2.13-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-density-fitness-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sfftw-dev_2.1.5-4.2+b2 sfftw2_2.1.5-4.2+b2 sysvinit-utils_2.96-5 tar_1.32+dfsg-1+rpi1 tzdata_2020d-1 util-linux_2.36.1-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.N4W8apWI/trustedkeys.kbx': General error
gpgv: Signature made Wed Dec 9 10:13:48 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./density-fitness_1.0.0-1.dsc
dpkg-source: info: extracting density-fitness in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking density-fitness_1.0.0.orig.tar.gz
dpkg-source: info: unpacking density-fitness_1.0.0-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying makefile.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-1dd9a08c-cf1b-4cc9-b8da-c098f64bc1be
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package density-fitness
dpkg-buildpackage: info: source version 1.0.0-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
aclocal: warning: couldn't open directory 'config/m4': No such file or directory
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- --disable-revision
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --disable-revision
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking whether g++ supports C++17 features with -std=c++17... yes
checking whether C++ compiler accepts -fstandalone-debug... no
checking for a BSD-compatible install... /usr/bin/install -c
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for a sed that does not truncate output... /bin/sed
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking whether gcc is Clang... no
checking whether pthreads work with -pthread... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking whether more special flags are required for pthreads... no
checking for PTHREAD_PRIO_INHERIT... yes
checking for mrc... no
configure: WARNING: The mrc application was not found, not using resources.
checking how to run the C++ preprocessor... g++ -std=c++17 -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking filesystem usability... yes
checking filesystem presence... yes
checking for filesystem... yes
checking for boostlib >= 1.65.1 (106501)... yes
checking whether the Boost::Program_Options library is available... yes
checking for exit in -lboost_program_options... yes
checking whether the Boost::IOStreams library is available... yes
checking for exit in -lboost_iostreams... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for pkg-config... /usr/bin/pkg-config
checking for libcifpp ... yes
checking for libzeep ... yes
checking for pkg-config... (cached) /usr/bin/pkg-config
checking for libpdb-redo ... yes
checking for clipper ... yes
checking clipper version... ok
configure: creating ./config.status
config.status: creating GNUmakefile
config.status: creating src/config.hpp
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p obj
>> src/density-fitness.cpp
In file included from /usr/include/c++/10/vector:72,
from /usr/include/boost/program_options/errors.hpp:14,
from /usr/include/boost/program_options/options_description.hpp:12,
from /usr/include/boost/program_options.hpp:15,
from src/density-fitness.cpp:38:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {zeep::json::element}; _Tp = zeep::json::element; _Alloc = std::allocator<zeep::json::element>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<zeep::json::element>::iterator' changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void zeep::json::element::emplace_back(Args&& ...) [with Args = {zeep::json::element}]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<zeep::json::element*, std::vector<zeep::json::element> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-> density-fitness
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 test VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
obj/density-fitness.o
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/density-fitness AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>'
install -d /<<PKGBUILDDIR>>/debian/density-fitness/usr/bin
install density-fitness /<<PKGBUILDDIR>>/debian/density-fitness/usr/bin/density-fitness
install -d /<<PKGBUILDDIR>>/debian/density-fitness/usr/share/man/man1
install -m 644 doc/density-fitness.1 /<<PKGBUILDDIR>>/debian/density-fitness/usr/share/man/man1/density-fitness.1;
gzip /<<PKGBUILDDIR>>/debian/density-fitness/usr/share/man/man1/density-fitness.1;
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a -a
dh_strip -a -a
dh_makeshlibs -a -a
dh_shlibdeps -a -a
dpkg-shlibdeps: warning: debian/density-fitness/usr/bin/density-fitness contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/density-fitness/usr/bin/density-fitness was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'density-fitness-dbgsym' in '../density-fitness-dbgsym_1.0.0-1_armhf.deb'.
dpkg-deb: building package 'density-fitness' in '../density-fitness_1.0.0-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../density-fitness_1.0.0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-20T23:24:40Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
density-fitness_1.0.0-1_armhf.changes:
--------------------------------------
Format: 1.8
Date: Tue, 08 Dec 2020 15:56:25 +0100
Source: density-fitness
Binary: density-fitness density-fitness-dbgsym
Architecture: armhf
Version: 1.0.0-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Maarten L. Hekkelman <maarten@hekkelman.com>
Description:
density-fitness - Calculates per-residue electron density scores
Closes: 976849
Changes:
density-fitness (1.0.0-1) unstable; urgency=medium
.
* Initial release (Closes: #976849)
Checksums-Sha1:
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4a0f78f577d78bd833f2b10acd571871346c5f6d 7184 density-fitness_1.0.0-1_armhf.buildinfo
9452cfd602d49b7daae3b2731ff7ea9c083daf70 83484 density-fitness_1.0.0-1_armhf.deb
Checksums-Sha256:
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aed6acd3b2c6ac1a7bbb846f74bdad3edbeffcd32303277ac2b5e72dc269f3ba 7184 density-fitness_1.0.0-1_armhf.buildinfo
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Files:
63a5ef39be1be38b79fc49784b8190a6 1644444 debug optional density-fitness-dbgsym_1.0.0-1_armhf.deb
1945badb77b21738c7f030f03643b299 7184 science optional density-fitness_1.0.0-1_armhf.buildinfo
f2cb7ac04d43fac257417b08714879e7 83484 science optional density-fitness_1.0.0-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
density-fitness-dbgsym_1.0.0-1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 1644444 bytes: control archive=544 bytes.
403 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: density-fitness-dbgsym
Source: density-fitness
Version: 1.0.0-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1739
Depends: density-fitness (= 1.0.0-1)
Section: debug
Priority: optional
Description: debug symbols for density-fitness
Build-Ids: f69e8e347400ffbc9aa33bf1371bf989ff41c3d8
drwxr-xr-x root/root 0 2020-12-08 14:56 ./
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/lib/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/lib/debug/.build-id/f6/
-rw-r--r-- root/root 1770252 2020-12-08 14:56 ./usr/lib/debug/.build-id/f6/9e8e347400ffbc9aa33bf1371bf989ff41c3d8.debug
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-12-08 14:56 ./usr/share/doc/density-fitness-dbgsym -> density-fitness
density-fitness_1.0.0-1_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 83484 bytes: control archive=1128 bytes.
1311 bytes, 23 lines control
290 bytes, 4 lines md5sums
Package: density-fitness
Version: 1.0.0-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 290
Depends: libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.4), libcifpp1 (>= 1.0.1), libclipper2 (>= 2.1.20201109), libgcc-s1 (>= 3.5), libpdb-redo1 (>= 1.0.1), libstdc++6 (>= 9), libzeep5 (>= 5.0.2)
Section: science
Priority: optional
Homepage: https://github.com/PDB-REDO/density-fitness
Description: Calculates per-residue electron density scores
The program density-fitness calculates electron density metrics,
for main- (includes CĪ² atom) and side-chain atoms of individual residues.
.
For this calculation, the program uses the structure model in either PDB
or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps.
If these maps are not readily available, the MTZ file and model can be used
to calculate maps clipper. Density-fitness support both X-ray and electron
diffraction data.
.
This program is essentially a reimplementation of edstats, a program
available from the CCP4 suite. However, the output now contains only the
RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm
and OPIA and no longer requires pre-calculated map coefficients.
drwxr-xr-x root/root 0 2020-12-08 14:56 ./
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/bin/
-rwxr-xr-x root/root 280584 2020-12-08 14:56 ./usr/bin/density-fitness
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/doc/density-fitness/
-rw-r--r-- root/root 166 2020-12-08 14:56 ./usr/share/doc/density-fitness/changelog.Debian.gz
-rw-r--r-- root/root 1873 2020-12-08 14:56 ./usr/share/doc/density-fitness/copyright
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/man/
drwxr-xr-x root/root 0 2020-12-08 14:56 ./usr/share/man/man1/
-rw-r--r-- root/root 2147 2020-12-08 14:56 ./usr/share/man/man1/density-fitness.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 19560
Build-Time: 332
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 616
Job: density-fitness_1.0.0-1
Machine Architecture: armhf
Package: density-fitness
Package-Time: 997
Source-Version: 1.0.0-1
Space: 19560
Status: successful
Version: 1.0.0-1
--------------------------------------------------------------------------------
Finished at 2020-12-20T23:24:40Z
Build needed 00:16:37, 19560k disc space