dazzdb →
1.0+git20221215.aad3a46-1 →
armhf → 2023-02-11 05:34:52
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| dazzdb 1.0+git20221215.aad3a46-1 (armhf) Sat, 11 Feb 2023 05:30:30 +0000 |
+==============================================================================+
Package: dazzdb
Version: 1.0+git20221215.aad3a46-1
Source Version: 1.0+git20221215.aad3a46-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-faf05f10-ef84-47d0-a1fe-1d84d24513e4' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.7 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.5 MB]
Fetched 28.2 MB in 12s (2335 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/dazzdb.git
Please use:
git clone https://salsa.debian.org/med-team/dazzdb.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 107 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main dazzdb 1.0+git20221215.aad3a46-1 (dsc) [2121 B]
Get:2 http://172.17.4.1/private bookworm-staging/main dazzdb 1.0+git20221215.aad3a46-1 (tar) [98.5 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main dazzdb 1.0+git20221215.aad3a46-1 (diff) [6688 B]
Fetched 107 kB in 0s (1675 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/dazzdb-GJVqGf/dazzdb-1.0+git20221215.aad3a46' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/dazzdb-GJVqGf' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-LLlaTB/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-LLlaTB/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-LLlaTB/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Packages [434 B]
Fetched 2110 B in 1s (3839 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 90 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (54.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12958 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev
Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-dazzdb-dummy' in '/<<BUILDDIR>>/resolver-LLlaTB/apt_archive/sbuild-build-depends-dazzdb-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-dazzdb-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Sources [502 B]
Get:5 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ Packages [579 B]
Fetched 2414 B in 1s (4001 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install dazzdb build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1
libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
po-debconf zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1
libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
po-debconf sbuild-build-depends-dazzdb-dummy zlib1g-dev
0 upgraded, 31 newly installed, 0 to remove and 90 not upgraded.
Need to get 18.8 MB of archives.
After this operation, 73.3 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-LLlaTB/apt_archive ./ sbuild-build-depends-dazzdb-dummy 0.invalid.0 [868 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.2-1 [1342 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.44-3 [95.3 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.44-3 [41.5 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-11 [156 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-3 [256 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-11 [495 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1+b1 [571 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-11 [1204 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.4 [942 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 12958 files and directories currently installed.)
Preparing to unpack .../00-libuchardet0_0.0.7-1_armhf.deb ...
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Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libicu72:armhf (72.1-3) ...
Setting up bsdextrautils (2.38.1-4) ...
Setting up libmagic-mgc (1:5.44-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.11.4) ...
Setting up libmagic1:armhf (1:5.44-3) ...
Setting up gettext-base (0.21-11) ...
Setting up m4 (1.4.19-3) ...
Setting up file (1:5.44-3) ...
Setting up autotools-dev (20220109.1) ...
Setting up autopoint (0.21-11) ...
Setting up autoconf (2.71-3) ...
Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1+b1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up gettext (0.21-11) ...
Setting up libtool (2.4.7-5) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-9) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.11.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up debhelper (13.11.4) ...
Setting up sbuild-build-depends-dazzdb-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39.50.20221208-5+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-10+rpi1 gcc-12_12.2.0-10+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 apt_2.5.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-11 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 binutils_2.39.50.20221208-5+rpi1 binutils-arm-linux-gnueabihf_2.39.50.20221208-5+rpi1 binutils-common_2.39.50.20221208-5+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-10+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.4 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-1 dirmngr_2.2.40-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.44-3 findutils_4.9.0-3 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-10+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-10+rpi1 gcc-12-base_12.2.0-10+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-11 gettext-base_0.21-11 gnupg_2.2.40-1 gnupg-l10n_2.2.40-1 gnupg-utils_2.2.40-1 gpg_2.2.40-1 gpg-agent_2.2.40-1 gpg-wks-client_2.2.40-1 gpg-wks-server_2.2.40-1 gpgconf_2.2.40-1 gpgsm_2.2.40-1 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-1 libacl1_2.3.1-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan8_12.2.0-10+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-10+rpi1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39.50.20221208-5+rpi1 libblkid1_2.38.1-4 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-6+rpi1 libc-dev-bin_2.36-6+rpi1 libc6_2.36-6+rpi1 libc6-dev_2.36-6+rpi1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-10+rpi1 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libctf-nobfd0_2.39.50.20221208-5+rpi1 libctf0_2.39.50.20221208-5+rpi1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.265 libdebhelper-perl_13.11.4 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-12-dev_12.2.0-10+rpi1 libgcc-s1_12.2.0-10+rpi1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-10+rpi1 libgpg-error0_1.46-1 libgssapi-krb5-2_1.20.1-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1 libisl23_0.25-1 libjansson4_2.14-2 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 libksba8_1.6.2-4 libldap-2.5-0_2.5.13+dfsg-2+rpi1+b1 liblz4-1_1.9.4-1+rpi1 liblzma5_5.4.0-0.1 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpfr6_4.1.0-3 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-3 libpcre3_2:8.39-14 libperl5.36_5.36.0-6 libpipeline1_1.5.7-1 libreadline8_8.2-1.2 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsmartcols1_2.38.1-4 libsqlite3-0_3.40.0-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 libsub-override-perl_0.09-4 libsystemd0_252.2-1+rpi1 libtasn1-6_4.19.0-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libubsan1_12.2.0-10+rpi1 libuchardet0_0.0.7-1 libudev1_252.2-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-4 libxml2_2.9.14+dfsg-1.1+b1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.12-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-1 mawk_1.3.4.20200120-3.1 mount_2.38.1-4 nano_7.1-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.4 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-6 perl-base_5.36.0-6 perl-modules-5.36_5.36.0-6 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.2 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dazzdb-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sysvinit-utils_3.05-7 tar_1.34+dfsg-1 tzdata_2022f-1 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 xz-utils_5.4.0-0.1 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.lhJUNY3Z/trustedkeys.kbx': General error
gpgv: Signature made Mon Feb 6 09:56:04 2023 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./dazzdb_1.0+git20221215.aad3a46-1.dsc
dpkg-source: info: extracting dazzdb in /<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46
dpkg-source: info: unpacking dazzdb_1.0+git20221215.aad3a46.orig.tar.xz
dpkg-source: info: unpacking dazzdb_1.0+git20221215.aad3a46-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying append-cflags.patch
dpkg-source: info: applying compiler-flags.patch
dpkg-source: info: applying destdir.patch
dpkg-source: info: applying use-after-free.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-faf05f10-ef84-47d0-a1fe-1d84d24513e4
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package dazzdb
dpkg-buildpackage: info: source version 1.0+git20221215.aad3a46-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE
rm -fr *.dSYM
rm -f dazz.db.tar.gz
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva
quiva2DB.c: In function 'main':
quiva2DB.c:455:9: warning: pointer 'input' may be used after 'fclose' [-Wuse-after-free]
455 | if (fgetc(input) != EOF)
| ^~~~~~~~~~~~
quiva2DB.c:350:17: note: call to 'fclose' here
350 | fclose(input);
| ^~~~~~~~~~~~~
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv
cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
127 | { uint64 symbol = (uint64) (node->lft);
| ^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
174 | node[value].lft = (HTree *) (uint64) i;
| ^
ONElib.c: In function 'oneSchemaCreateDynamic':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:390:3: note: in expansion of macro 'assert'
390 | assert (fileType && strlen(fileType) > 0) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:391:3: note: in expansion of macro 'assert'
391 | assert (!subType || strlen(subType) > 0) ;
| ^~~~~~
ONElib.c:393:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
393 | sprintf (text, "P %ld %s\nS %ld %s\n", strlen(fileType),fileType, strlen(subType), subType) ;
| ~~^ ~~~~~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
ONElib.c:393:35: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
393 | sprintf (text, "P %ld %s\nS %ld %s\n", strlen(fileType),fileType, strlen(subType), subType) ;
| ~~^ ~~~~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
ONElib.c:395:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
395 | sprintf (text, "P %ld %s\n", strlen(fileType), fileType) ;
| ~~^ ~~~~~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
ONElib.c: In function 'readBuf':
ONElib.c:614:40: warning: comparison is always false due to limited range of data type [-Wtype-limits]
614 | if (isspace(x) || x == '\0' || x == EOF)
| ^~
ONElib.c: In function 'readString':
ONElib.c:662:32: warning: comparison is always false due to limited range of data type [-Wtype-limits]
662 | if (*cp == '\n' || *cp == EOF)
| ^~
ONElib.c: In function 'readFlush':
ONElib.c:693:11: warning: comparison is always false due to limited range of data type [-Wtype-limits]
693 | if (x == EOF)
| ^~
ONElib.c: In function 'oneReadLine':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:943:3: note: in expansion of macro 'assert'
943 | assert (!vf->isWrite) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:944:3: note: in expansion of macro 'assert'
944 | assert (!vf->isFinal) ;
| ^~~~~~
ONElib.c: In function 'oneFileOpenRead':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:1156:3: note: in expansion of macro 'assert'
1156 | assert (fileType == NULL || strlen(fileType) > 0) ;
| ^~~~~~
ONElib.c: In function 'addProvenance':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:1758:3: note: in expansion of macro 'assert'
1758 | assert (!vf->isHeaderOut) ;
| ^~~~~~
ONElib.c: In function 'oneAddProvenance':
ONElib.c:1792:29: warning: implicit declaration of function 'vasprintf'; did you mean 'vsprintf'? [-Wimplicit-function-declaration]
1792 | va_start (args, format) ; vasprintf (&p.command, format, args) ; va_end (args) ;
| ^~~~~~~~~
| vsprintf
ONElib.c: In function 'addReference':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:1809:3: note: in expansion of macro 'assert'
1809 | assert (!vf->isHeaderOut) ;
| ^~~~~~
ONElib.c: In function 'writeHeader':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:1883:3: note: in expansion of macro 'assert'
1883 | assert (vf->isWrite) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:1884:3: note: in expansion of macro 'assert'
1884 | assert (vf->line == 0) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:1885:3: note: in expansion of macro 'assert'
1885 | assert (vf->share >= 0) ;
| ^~~~~~
ONElib.c:1889:24: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1889 | fprintf (vf->f, "1 %lu %s %d %d", strlen(vf->fileType), vf->fileType, MAJOR, MINOR);
| ~~^ ~~~~~~~~~~~~~~~~~~~~
| | |
| | size_t {aka unsigned int}
| long unsigned int
| %u
ONElib.c:1892:30: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1892 | { fprintf (vf->f, "\n2 %lu %s", strlen(vf->subType), vf->subType);
| ~~^ ~~~~~~~~~~~~~~~~~~~
| | |
| | size_t {aka unsigned int}
| long unsigned int
| %u
ONElib.c:1901:36: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1901 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s",
| ~~^
| |
| long unsigned int
| %u
1902 | strlen(p->program), p->program, strlen(p->version), p->version,
| ~~~~~~~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
ONElib.c:1901:43: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1901 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s",
| ~~^
| |
| long unsigned int
| %u
1902 | strlen(p->program), p->program, strlen(p->version), p->version,
| ~~~~~~~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
ONElib.c:1901:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1901 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s",
| ~~^
| |
| long unsigned int
| %u
1902 | strlen(p->program), p->program, strlen(p->version), p->version,
1903 | strlen(p->command), p->command, strlen(p->date), p->date);
| ~~~~~~~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
ONElib.c:1901:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 9 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1901 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s",
| ~~^
| |
| long unsigned int
| %u
1902 | strlen(p->program), p->program, strlen(p->version), p->version,
1903 | strlen(p->command), p->command, strlen(p->date), p->date);
| ~~~~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
ONElib.c:1915:34: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1915 | { fprintf (vf->f, "\n< %lu %s %" PRId64 "", strlen(r->filename), r->filename, r->count);
| ~~^ ~~~~~~~~~~~~~~~~~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
ONElib.c:1922:34: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
1922 | { fprintf (vf->f, "\n> %lu %s", strlen(r->filename), r->filename);
| ~~^ ~~~~~~~~~~~~~~~~~~~
| | |
| | size_t {aka unsigned int}
| long unsigned int
| %u
ONElib.c: In function 'oneWriteLine':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:2027:3: note: in expansion of macro 'assert'
2027 | assert (vf->isWrite) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:2028:3: note: in expansion of macro 'assert'
2028 | assert (!vf->isFinal || !isalpha(t)) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:2031:3: note: in expansion of macro 'assert'
2031 | assert (li) ;
| ^~~~~~
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:2038:7: note: in expansion of macro 'assert'
2038 | { assert (listLen >= 0) ;
| ^~~~~~
ONElib.c: In function 'oneFileClose':
ONElib.c:35:19: warning: statement with no effect [-Wunused-value]
35 | #define assert(x) 0
| ^
ONElib.c:2486:3: note: in expansion of macro 'assert'
2486 | assert (vf->share >= 0) ;
| ^~~~~~
ONElib.c: In function 'intGet':
ONElib.c:3488:17: warning: this statement may fall through [-Wimplicit-fallthrough=]
3488 | case 0: die ("int packing error") ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~
ONElib.c:3489:9: note: here
3489 | case 1: *pval = *(I64*)(u+1) & 0x0000000000ffff ; return 3 ;
| ^~~~
ONElib.c:3500:17: warning: this statement may fall through [-Wimplicit-fallthrough=]
3500 | case 0: die ("int packing error") ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~
ONElib.c:3501:9: note: here
3501 | case 1: *pval = *(I64*)(u+1) | 0xffffffffffff0000 ; return 3 ;
| ^~~~
ONElib.c:3486:7: warning: this statement may fall through [-Wimplicit-fallthrough=]
3486 | switch (u[0] & 0x07)
| ^~~~~~
ONElib.c:3497:5: note: here
3497 | case 4:
| ^~~~
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3501:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3501 | case 1: *pval = *(I64*)(u+1) | 0xffffffffffff0000 ; return 3 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3502:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3502 | case 2: *pval = *(I64*)(u+1) | 0xffffffffff000000 ; return 4 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3503:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3503 | case 3: *pval = *(I64*)(u+1) | 0xffffffff00000000 ; return 5 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3504:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3504 | case 4: *pval = *(I64*)(u+1) | 0xffffff0000000000 ; return 6 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3505:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3505 | case 5: *pval = *(I64*)(u+1) | 0xffff000000000000 ; return 7 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3506:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3506 | case 6: *pval = *(I64*)(u+1) | 0xff00000000000000 ; return 8 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7:
ONElib.c:3507:23: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3507 | case 7: *pval = *(I64*)(u+1) ; return 9 ;
| ~~~~~~^~~~~~~~~~~~~~
ONElib.c: In function 'ltfRead':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3501:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3501 | case 1: *pval = *(I64*)(u+1) | 0xffffffffffff0000 ; return 3 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3502:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3502 | case 2: *pval = *(I64*)(u+1) | 0xffffffffff000000 ; return 4 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3503:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3503 | case 3: *pval = *(I64*)(u+1) | 0xffffffff00000000 ; return 5 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3504:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3504 | case 4: *pval = *(I64*)(u+1) | 0xffffff0000000000 ; return 6 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3505:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3505 | case 5: *pval = *(I64*)(u+1) | 0xffff000000000000 ; return 7 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3506:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3506 | case 6: *pval = *(I64*)(u+1) | 0xff00000000000000 ; return 8 ;
| ^~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
In function 'intGet',
inlined from 'ltfRead' at ONElib.c:3546:7,
inlined from 'readCompressedFields' at ONElib.c:894:15,
inlined from 'oneReadLine' at ONElib.c:1037:2:
ONElib.c:3507:23: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
3507 | case 7: *pval = *(I64*)(u+1) ; return 9 ;
| ~~~~~~^~~~~~~~~~~~~~
ONElib.c: In function 'oneReadLine':
ONElib.c:3541:17: note: 'u' declared here
3541 | unsigned char u[16] ;
| ^
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
dh_auto_install
make -j4 install DESTDIR=/<<BUILDDIR>>/dazzdb-1.0\+git20221215.aad3a46/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
install -d /<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46/debian/dazzdb/usr/bin
install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46/debian/dazzdb/usr/bin
make[2]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
cd /<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46/debian/dazzdb/usr/bin && mv simulator dsimulator
mkdir -p /<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46/debian/dazzdb/usr/share/man/man1
for command in /<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46/debian/dazzdb/usr/bin/*; \
do \
ln -s dazzdb.1 \
/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \
done
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+git20221215.aad3a46'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dazzdb/usr/bin/DB2arrow debian/dazzdb/usr/bin/arrow2DB debian/dazzdb/usr/bin/DBrm debian/dazzdb/usr/bin/DB2quiva debian/dazzdb/usr/bin/DBcp debian/dazzdb/usr/bin/DB2fasta debian/dazzdb/usr/bin/DBsplit debian/dazzdb/usr/bin/DBstats debian/dazzdb/usr/bin/fasta2DB debian/dazzdb/usr/bin/DBdust debian/dazzdb/usr/bin/DAM2fasta debian/dazzdb/usr/bin/quiva2DB debian/dazzdb/usr/bin/Catrack debian/dazzdb/usr/bin/dsimulator debian/dazzdb/usr/bin/DBtrim debian/dazzdb/usr/bin/DBwipe debian/dazzdb/usr/bin/rangen debian/dazzdb/usr/bin/fasta2DAM debian/dazzdb/usr/bin/DB2ONE debian/dazzdb/usr/bin/DBshow debian/dazzdb/usr/bin/DBmv were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20221215.aad3a46-1_armhf.deb'.
dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20221215.aad3a46-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../dazzdb_1.0+git20221215.aad3a46-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../dazzdb_1.0+git20221215.aad3a46-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-02-11T05:34:48Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
dazzdb_1.0+git20221215.aad3a46-1_armhf.changes:
-----------------------------------------------
Format: 1.8
Date: Mon, 06 Feb 2023 10:52:26 +0100
Source: dazzdb
Binary: dazzdb dazzdb-dbgsym
Architecture: armhf
Version: 1.0+git20221215.aad3a46-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
dazzdb - manage nucleotide sequencing read data
Changes:
dazzdb (1.0+git20221215.aad3a46-1) unstable; urgency=medium
.
* New upstream version
* Standards-Version: 4.6.2 (routine-update)
* Set upstream metadata fields: Repository-Browse.
Checksums-Sha1:
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35a76f8bfaa8d93ac47ac62fdb94772ba2106e39 5109 dazzdb_1.0+git20221215.aad3a46-1_armhf.buildinfo
53e8bb354d0ec6b3a8ca465815fdc609459839a9 162976 dazzdb_1.0+git20221215.aad3a46-1_armhf.deb
Checksums-Sha256:
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63084efaf3edbcb3fe52f6bdad44e9349731cc208cda7499d359dec7927f81ed 5109 dazzdb_1.0+git20221215.aad3a46-1_armhf.buildinfo
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Files:
394f44e1f52ba1fe4806364651f2986d 1681344 debug optional dazzdb-dbgsym_1.0+git20221215.aad3a46-1_armhf.deb
2cc2246c0007f9c0f7e26e5a4a208dd7 5109 science optional dazzdb_1.0+git20221215.aad3a46-1_armhf.buildinfo
ae64415df170759d4c9fa8eea2ad1399 162976 science optional dazzdb_1.0+git20221215.aad3a46-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
dazzdb-dbgsym_1.0+git20221215.aad3a46-1_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 1681344 bytes: control archive=1560 bytes.
1223 bytes, 12 lines control
2312 bytes, 22 lines md5sums
Package: dazzdb-dbgsym
Source: dazzdb
Version: 1.0+git20221215.aad3a46-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2081
Depends: dazzdb (= 1.0+git20221215.aad3a46-1)
Section: debug
Priority: optional
Description: debug symbols for dazzdb
Build-Ids: 1a281bcbe38b16b6fac4f725f68a80d26537b9e2 44539acb4f0aa14218b04b1b393ca9c4651349f0 519543997be7e4c3791a0959a2c163b54c407bdd 65adef1ba52b0f50044111d484a1e9bd9538b883 65dfa193d0b9a289c1aa28be060cc02949f7e89c 665b0f2574e8d130568b899c494fff6964a6b02d 6f9bb1766e7808fed6ad1bac5b5c8ac185478ca5 6fe7e0901493ff1675ae69ccafff610bc689c1ed 7505d5eede65579a96e8eb574cf68e9c075d2927 772ddd2025385ac65d3dc18139e2fb842ab69b1a 893a7743bedd560710a3e2c8f1729ace4513049a 8f1a0a509b6248a8726a1aad22a55ab3f90b07e5 9bc02dca38dfc2044d99c73b552d97b99c929775 a7fce844dabc1e3e207809ea972b626e38ac0c25 a9595a2ad9ef4adb65bb82260f7600d10243cfa2 acbfc47840170891543b3f83b7c54eeb3739b3af c5c1066f55a4b1245d41b7549f0c477e67777ad5 d43974a91710febfc1285c544a7cf349c165c7a0 ed40993e7e88f6767e8f9e2b7bc63f84ddbd1c22 fa673253d4649c571ce3016c13bfff6a0d61de00 fd83b27da1daaea4e906ed52706d02f7d87224ab
drwxr-xr-x root/root 0 2023-02-06 09:52 ./
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/
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-rw-r--r-- root/root 99068 2023-02-06 09:52 ./usr/lib/debug/.build-id/1a/281bcbe38b16b6fac4f725f68a80d26537b9e2.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.build-id/44/
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-rw-r--r-- root/root 104748 2023-02-06 09:52 ./usr/lib/debug/.build-id/65/dfa193d0b9a289c1aa28be060cc02949f7e89c.debug
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-rw-r--r-- root/root 94140 2023-02-06 09:52 ./usr/lib/debug/.build-id/c5/c1066f55a4b1245d41b7549f0c477e67777ad5.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.build-id/d4/
-rw-r--r-- root/root 97636 2023-02-06 09:52 ./usr/lib/debug/.build-id/d4/3974a91710febfc1285c544a7cf349c165c7a0.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.build-id/ed/
-rw-r--r-- root/root 98972 2023-02-06 09:52 ./usr/lib/debug/.build-id/ed/40993e7e88f6767e8f9e2b7bc63f84ddbd1c22.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.build-id/fa/
-rw-r--r-- root/root 96904 2023-02-06 09:52 ./usr/lib/debug/.build-id/fa/673253d4649c571ce3016c13bfff6a0d61de00.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.build-id/fd/
-rw-r--r-- root/root 184852 2023-02-06 09:52 ./usr/lib/debug/.build-id/fd/83b27da1daaea4e906ed52706d02f7d87224ab.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 8472 2023-02-06 09:52 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/dazzdb.debug
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/doc/dazzdb-dbgsym -> dazzdb
dazzdb_1.0+git20221215.aad3a46-1_armhf.deb
------------------------------------------
new Debian package, version 2.0.
size 162976 bytes: control archive=2120 bytes.
2157 bytes, 39 lines control
1526 bytes, 28 lines md5sums
Package: dazzdb
Version: 1.0+git20221215.aad3a46-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1758
Depends: libc6 (>= 2.34)
Section: science
Priority: optional
Homepage: https://github.com/thegenemyers/DAZZ_DB
Description: manage nucleotide sequencing read data
To facilitate the multiple phases of the dazzler assembler, all the read data
is organized into what is effectively a database of the
reads and their meta-information. The design goals for this data base
are as follows:
* The database stores the source Pacbio read information in such a
way that it can re-create the original input data, thus permitting
a user to remove the (effectively redundant) source files. This
avoids duplicating the same data, once in the source file and once
in the database.
* The data base can be built up incrementally, that is new sequence
data can be added to the data base over time.
* The data base flexibly allows one to store any meta-data desired for
reads. This is accomplished with the concept of *tracks* that
implementors can add as they need them.
* The data is held in a compressed form equivalent to the .dexta and
.dexqv files of the data extraction module. Both the .fasta and
.quiva information for each read is held in the data base and can be
recreated from it. The .quiva information can be added separately and
later on if desired.
* To facilitate job parallel, cluster operation of the phases of the
assembler, the database has a concept of a *current partitioning* in
which all the reads that are over a given length and optionally
unique to a well, are divided up into *blocks* containing roughly a
given number of bases, except possibly the last block which may have
a short count. Often programs can be run on blocks or pairs of blocks
and each such job is reasonably well balanced as the blocks are all
the same size. One must be careful about changing the partition
during an assembly as doing so can void the structural validity of
any interim block-based results.
drwxr-xr-x root/root 0 2023-02-06 09:52 ./
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/bin/
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/Catrack
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DAM2fasta
-rwxr-xr-x root/root 201128 2023-02-06 09:52 ./usr/bin/DB2ONE
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DB2arrow
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DB2fasta
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DB2quiva
-rwxr-xr-x root/root 67184 2023-02-06 09:52 ./usr/bin/DBcp
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DBdust
-rwxr-xr-x root/root 67184 2023-02-06 09:52 ./usr/bin/DBmv
-rwxr-xr-x root/root 67184 2023-02-06 09:52 ./usr/bin/DBrm
-rwxr-xr-x root/root 132716 2023-02-06 09:52 ./usr/bin/DBshow
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DBsplit
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DBstats
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DBtrim
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/DBwipe
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/arrow2DB
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/dsimulator
-rwxr-xr-x root/root 132716 2023-02-06 09:52 ./usr/bin/fasta2DAM
-rwxr-xr-x root/root 132716 2023-02-06 09:52 ./usr/bin/fasta2DB
-rwxr-xr-x root/root 67180 2023-02-06 09:52 ./usr/bin/quiva2DB
-rwxr-xr-x root/root 67160 2023-02-06 09:52 ./usr/bin/rangen
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/doc/dazzdb/
-rw-r--r-- root/root 244 2023-02-06 09:52 ./usr/share/doc/dazzdb/README.Debian
-rw-r--r-- root/root 10998 2022-12-15 18:25 ./usr/share/doc/dazzdb/README.md.gz
-rw-r--r-- root/root 278 2023-02-06 09:52 ./usr/share/doc/dazzdb/README.test
-rw-r--r-- root/root 900 2023-02-06 09:52 ./usr/share/doc/dazzdb/changelog.Debian.gz
-rw-r--r-- root/root 1772 2023-02-06 09:52 ./usr/share/doc/dazzdb/copyright
-rw-r--r-- root/root 1815 2023-02-06 09:52 ./usr/share/doc/dazzdb/run-unit-test
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/man/
drwxr-xr-x root/root 0 2023-02-06 09:52 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/Catrack.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DAM2fasta.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DB2ONE.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DB2arrow.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DB2fasta.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DB2quiva.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBcp.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBdust.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBmv.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBrm.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBshow.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBsplit.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBstats.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBtrim.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/DBwipe.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/arrow2DB.1.gz -> dazzdb.1.gz
-rw-r--r-- root/root 314 2023-02-06 09:52 ./usr/share/man/man1/dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/dsimulator.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/fasta2DAM.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/fasta2DB.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/quiva2DB.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2023-02-06 09:52 ./usr/share/man/man1/rangen.1.gz -> dazzdb.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 12380
Build-Time: 120
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 116
Job: dazzdb_1.0+git20221215.aad3a46-1
Machine Architecture: armhf
Package: dazzdb
Package-Time: 258
Source-Version: 1.0+git20221215.aad3a46-1
Space: 12380
Status: successful
Version: 1.0+git20221215.aad3a46-1
--------------------------------------------------------------------------------
Finished at 2023-02-11T05:34:48Z
Build needed 00:04:18, 12380k disk space