dazzdb →
1.0+20160930-2 →
armhf → 2017-01-07 04:46:19
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd.raspbian.org
+==============================================================================+
| dazzdb 1.0+20160930-2 (armhf) Sat, 07 Jan 2017 04:38:02 +0000 |
+==============================================================================+
Package: dazzdb
Version: 1.0+20160930-2
Source Version: 1.0+20160930-2
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-4a9da45f-583e-4822-9a71-c176b30547da' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9727 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.7 MB]
Fetched 21.4 MB in 26s (815 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/dazzdb.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/dazzdb.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 75.8 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main dazzdb 1.0+20160930-2 (dsc) [1941 B]
Get:2 http://172.17.0.1/private stretch-staging/main dazzdb 1.0+20160930-2 (tar) [69.7 kB]
Get:3 http://172.17.0.1/private stretch-staging/main dazzdb 1.0+20160930-2 (diff) [4200 B]
Fetched 75.8 kB in 0s (610 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/dazzdb-qn6k58/dazzdb-1.0+20160930' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/dazzdb-qn6k58' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-M2sehE/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-M2sehE/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-M2sehE/gpg/trustdb.gpg: trustdb created
gpg: key 5FBC947B34E39F26: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 5FBC947B34E39F26: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 5FBC947B34E39F26: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (3490 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n libfuse2 manpages
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 54 not upgraded.
Need to get 776 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [776 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 776 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12988 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10)
Filtered Build-Depends: debhelper (>= 10)
dpkg-deb: building package 'sbuild-build-depends-dazzdb-dummy' in '/<<BUILDDIR>>/resolver-M2sehE/apt_archive/sbuild-build-depends-dazzdb-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-dazzdb-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Sources [487 B]
Get:5 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ Packages [566 B]
Fetched 2386 B in 0s (3891 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install dazzdb build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n libfuse2 manpages
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libbsd0 libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libbsd0 libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf sbuild-build-depends-dazzdb-dummy
0 upgraded, 32 newly installed, 0 to remove and 54 not upgraded.
Need to get 19.1 MB/19.1 MB of archives.
After this operation, 64.8 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-M2sehE/apt_archive ./ sbuild-build-depends-dazzdb-dummy 0.invalid.0 [778 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.12 [178 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.29-2 [221 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.29-2 [104 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.29-2 [63.1 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libicu57 armhf 57.1-5 [7427 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2.1 [804 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-5 [733 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.029-2 [15.3 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.029-2 [9330 B]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.50.2-2 [2527 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-2 [131 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf debhelper all 10.2.2 [826 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 19.1 MB in 7s (2696 kB/s)
Selecting previously unselected package groff-base.
(Reading database ... 12988 files and directories currently installed.)
Preparing to unpack .../00-groff-base_1.22.3-9_armhf.deb ...
Unpacking groff-base (1.22.3-9) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../01-libbsd0_0.8.3-1_armhf.deb ...
Unpacking libbsd0:armhf (0.8.3-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../02-bsdmainutils_9.0.12_armhf.deb ...
Unpacking bsdmainutils (9.0.12) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../03-libpipeline1_1.4.1-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.4.1-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../04-man-db_2.7.6.1-2_armhf.deb ...
Unpacking man-db (2.7.6.1-2) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../05-libmagic-mgc_1%3a5.29-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.29-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../06-libmagic1_1%3a5.29-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.29-2) ...
Selecting previously unselected package file.
Preparing to unpack .../07-file_1%3a5.29-2_armhf.deb ...
Unpacking file (1:5.29-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../08-gettext-base_0.19.8.1-1_armhf.deb ...
Unpacking gettext-base (0.19.8.1-1) ...
Selecting previously unselected package libicu57:armhf.
Preparing to unpack .../09-libicu57_57.1-5_armhf.deb ...
Unpacking libicu57:armhf (57.1-5) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../10-libxml2_2.9.4+dfsg1-2.1_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-2.1) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../11-libsigsegv2_2.10-5_armhf.deb ...
Unpacking libsigsegv2:armhf (2.10-5) ...
Selecting previously unselected package m4.
Preparing to unpack .../12-m4_1.4.17-5_armhf.deb ...
Unpacking m4 (1.4.17-5) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../13-autoconf_2.69-10_all.deb ...
Unpacking autoconf (2.69-10) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../14-autotools-dev_20161112.1_all.deb ...
Unpacking autotools-dev (20161112.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../15-automake_1%3a1.15-5_all.deb ...
Unpacking automake (1:1.15-5) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../16-autopoint_0.19.8.1-1_all.deb ...
Unpacking autopoint (0.19.8.1-1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../17-libtool_2.4.6-2_all.deb ...
Unpacking libtool (2.4.6-2) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../18-dh-autoreconf_12_all.deb ...
Unpacking dh-autoreconf (12) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../19-libarchive-zip-perl_1.59-1_all.deb ...
Unpacking libarchive-zip-perl (1.59-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../20-libfile-stripnondeterminism-perl_0.029-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.029-2) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../21-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../22-dh-strip-nondeterminism_0.029-2_all.deb ...
Unpacking dh-strip-nondeterminism (0.029-2) ...
Selecting previously unselected package libffi6:armhf.
Preparing to unpack .../23-libffi6_3.2.1-6_armhf.deb ...
Unpacking libffi6:armhf (3.2.1-6) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../24-libglib2.0-0_2.50.2-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.50.2-2) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../25-libcroco3_0.6.11-2_armhf.deb ...
Unpacking libcroco3:armhf (0.6.11-2) ...
Selecting previously unselected package libunistring0:armhf.
Preparing to unpack .../26-libunistring0_0.9.6+really0.9.3-0.1_armhf.deb ...
Unpacking libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../27-gettext_0.19.8.1-1_armhf.deb ...
Unpacking gettext (0.19.8.1-1) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../28-intltool-debian_0.35.0+20060710.4_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../29-po-debconf_1.0.20_all.deb ...
Unpacking po-debconf (1.0.20) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../30-debhelper_10.2.2_all.deb ...
Unpacking debhelper (10.2.2) ...
Selecting previously unselected package sbuild-build-depends-dazzdb-dummy.
Preparing to unpack .../31-sbuild-build-depends-dazzdb-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-dazzdb-dummy (0.invalid.0) ...
Setting up libarchive-zip-perl (1.59-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up groff-base (1.22.3-9) ...
Setting up gettext-base (0.19.8.1-1) ...
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up m4 (1.4.17-5) ...
Setting up libicu57:armhf (57.1-5) ...
Setting up libbsd0:armhf (0.8.3-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-2.1) ...
Setting up libmagic-mgc (1:5.29-2) ...
Setting up libmagic1:armhf (1:5.29-2) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
Setting up autotools-dev (20161112.1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up libffi6:armhf (3.2.1-6) ...
Setting up bsdmainutils (9.0.12) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-1) ...
Setting up libfile-stripnondeterminism-perl (0.029-2) ...
Setting up libglib2.0-0:armhf (2.50.2-2) ...
No schema files found: doing nothing.
Setting up autoconf (2.69-10) ...
Setting up file (1:5.29-2) ...
Setting up libcroco3:armhf (0.6.11-2) ...
Setting up automake (1:1.15-5) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2) ...
Setting up gettext (0.19.8.1-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.20) ...
Setting up dh-autoreconf (12) ...
Setting up dh-strip-nondeterminism (0.029-2) ...
Setting up debhelper (10.2.2) ...
Setting up sbuild-build-depends-dazzdb-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.27.51.20161127-1 dpkg-dev_1.18.15 g++-6_6.2.1-5+rpi1 gcc-6_6.2.1-5+rpi1 libc6-dev_2.24-7+rpi1 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4~beta1 autoconf_2.69-10 automake_1:1.15-5 autopoint_0.19.8.1-1 autotools-dev_20161112.1 base-files_9.7+rpi1 base-passwd_3.5.41 bash_4.4-2 binutils_2.27.51.20161127-1 bsdmainutils_9.0.12 bsdutils_1:2.29-1 build-essential_12.2 bzip2_1.0.6-8 coreutils_8.25-2 cpio_2.11+dfsg-6 cpp_4:6.1.1-1 cpp-6_6.2.1-5+rpi1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_10.2.2 debianutils_4.8.1 dh-autoreconf_12 dh-strip-nondeterminism_0.029-2 diffutils_1:3.5-1 dmsetup_2:1.02.136-1 dpkg_1.18.15 dpkg-dev_1.18.15 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-2 file_1:5.29-2 findutils_4.6.0+git+20161106-1 fuse2fs_1.43.3-1 g++_4:6.1.1-1 g++-6_6.2.1-5+rpi1 gcc_4:6.1.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-6_6.2.1-5+rpi1 gcc-6-base_6.2.1-5+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gnupg_2.1.16-2 gnupg-agent_2.1.16-2 gnupg-l10n_2.1.16-2 gpgv_2.1.16-2 grep_2.26-1 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 init_1.46 init-system-helpers_1.46 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_23-1 libacl1_2.2.52-3 libapparmor1_2.10.95-6 libapt-pkg5.0_1.4~beta1 libarchive-zip-perl_1.59-1 libasan3_6.2.1-5+rpi1 libassuan0_2.4.3-2 libatomic1_6.2.1-5+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-1 libaudit1_1:2.6.7-1 libblkid1_2.29-1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.24-7+rpi1 libc-dev-bin_2.24-7+rpi1 libc6_2.24-7+rpi1 libc6-dev_2.24-7+rpi1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.2.1-5+rpi1 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.3-2 libdb5.3_5.3.28-12 libdbus-1-3_1.10.14-1 libdebconfclient0_0.218 libdevmapper1.02.1_2:1.02.136-1 libdpkg-perl_1.18.15 libdrm2_2.4.74-1 libfakeroot_1.21-2 libfdisk1_2.29-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.029-2 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.2.1-5+rpi1 libgcc1_1:6.2.1-5+rpi1 libgcrypt20_1.7.3-2 libgdbm3_1.8.3-14 libglib2.0-0_2.50.2-2 libgmp10_2:6.1.1+dfsg-1 libgomp1_6.2.1-5+rpi1 libgpg-error0_1.25-1 libicu57_57.1-5 libidn11_1.33-1 libip4tc0_1.6.0-4 libisl15_0.17.1-1 libklibc_2.0.4-9+rpi1 libkmod2_23-1 libksba8_1.3.5-2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.29-2 libmagic1_1:5.29-2 libmount1_2.29-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160917-1 libncursesw5_6.0+20160917-1 libnpth0_1.3-1 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpcre3_2:8.39-2 libperl5.24_5.24.1~rc4-1 libpipeline1_1.4.1-2 libpng12-0_1.2.54-6 libprocps6_2:3.3.12-3 libreadline7_7.0-1 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-1 libsemanage1_2.6-1 libsepol1_2.6-1 libsigsegv2_2.10-5 libsmartcols1_2.29-1 libsqlite3-0_3.15.2-1 libss2_1.43.3-1 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 libsystemd0_232-6 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160917-1 libtool_2.4.6-2 libubsan0_6.2.1-5+rpi1 libudev1_232-6 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1 libxml2_2.9.4+dfsg1-2.1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.3 lsb-base_9.20161125+rpi1 m4_1.4.17-5 make_4.1-9 makedev_2.3.1-93 man-db_2.7.6.1-2 manpages_4.08-1 mawk_1.3.3-17 mount_2.29-1 multiarch-support_2.24-7+rpi1 nano_2.7.1-1 ncurses-base_6.0+20160917-1 ncurses-bin_6.0+20160917-1 passwd_1:4.2-3.3 patch_2.7.5-1 perl_5.24.1~rc4-1 perl-base_5.24.1~rc4-1 perl-modules-5.24_5.24.1~rc4-1 pinentry-curses_0.9.7-9 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dazzdb-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_232-6 systemd-sysv_232-6 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1.1 tzdata_2016j-2 udev_232-6 util-linux_2.29-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Dec 27 21:29:06 2016 UTC
gpgv: using RSA key 59B2306F3AF9DDC1
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./dazzdb_1.0+20160930-2.dsc
dpkg-source: info: extracting dazzdb in /<<BUILDDIR>>/dazzdb-1.0+20160930
dpkg-source: info: unpacking dazzdb_1.0+20160930.orig.tar.gz
dpkg-source: info: unpacking dazzdb_1.0+20160930-2.debian.tar.xz
dpkg-source: info: applying append-cflags.patch
dpkg-source: info: applying compiler-flags.patch
dpkg-source: info: applying destdir.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-4a9da45f-583e-4822-9a71-c176b30547da
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package dazzdb
dpkg-buildpackage: info: source version 1.0+20160930-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build dazzdb-1.0+20160930
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm simulator fasta2DAM DAM2fasta DBdump rangen
rm -fr *.dSYM
rm -f dazz.db.tar.gz
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_autoreconf_clean
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro fasta2DB.c DB.c DB.h QV.c QV.h -lm -o fasta2DB
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DB2fasta.c DB.c DB.h QV.c QV.h -lm -o DB2fasta
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro quiva2DB.c DB.c DB.h QV.c QV.h -lm -o quiva2DB
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DB2quiva.c DB.c DB.h QV.c QV.h -lm -o DB2quiva
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DBsplit.c DB.c DB.h QV.c QV.h -lm -o DBsplit
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DBdust.c DB.c DB.h QV.c QV.h -lm -o DBdust
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro Catrack.c DB.c DB.h QV.c QV.h -lm -o Catrack
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DBshow.c DB.c DB.h QV.c QV.h -lm -o DBshow
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DBstats.c DB.c DB.h QV.c QV.h -lm -o DBstats
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DBrm.c DB.c DB.h QV.c QV.h -lm -o DBrm
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro simulator.c DB.c DB.h QV.c QV.h -lm -o simulator
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro fasta2DAM.c DB.c DB.h QV.c QV.h -lm -o fasta2DAM
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DAM2fasta.c DB.c DB.h QV.c QV.h -lm -o DAM2fasta
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro DBdump.c DB.c DB.h QV.c QV.h -lm -o DBdump
DBdump.c: In function 'main':
DBdump.c:678:33: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
printf("H %ld %s\n",strlen(header),header);
^
DBdump.c:686:33: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
printf("H %ld %s\n",strlen(flist[map]),flist[map]);
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro rangen.c -lm -o rangen
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_auto_install
make -j4 install DESTDIR=/<<BUILDDIR>>/dazzdb-1.0\+20160930/debian/dazzdb AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
install -d /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin
install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm simulator fasta2DAM DAM2fasta DBdump rangen /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin
make[2]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
cd /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin && mv simulator dsimulator
mkdir -p /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/share/man/man1
for command in /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin/*; \
do \
ln -s dazzdb.1 \
/<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \
done
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dazzdb/usr/bin/DB2quiva debian/dazzdb/usr/bin/Catrack debian/dazzdb/usr/bin/dsimulator debian/dazzdb/usr/bin/DBsplit debian/dazzdb/usr/bin/DB2fasta debian/dazzdb/usr/bin/DAM2fasta debian/dazzdb/usr/bin/fasta2DB debian/dazzdb/usr/bin/quiva2DB debian/dazzdb/usr/bin/DBstats debian/dazzdb/usr/bin/fasta2DAM debian/dazzdb/usr/bin/DBdump debian/dazzdb/usr/bin/rangen debian/dazzdb/usr/bin/DBdust debian/dazzdb/usr/bin/DBrm debian/dazzdb/usr/bin/DBshow were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+20160930-2_armhf.deb'.
dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+20160930-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genbuildinfo: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=any -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../dazzdb_1.0+20160930-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build dazzdb-1.0+20160930
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-01-07T04:45:30Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
dazzdb_1.0+20160930-2_armhf.changes:
------------------------------------
Format: 1.8
Date: Tue, 27 Dec 2016 13:19:39 -0800
Source: dazzdb
Binary: dazzdb
Architecture: armhf
Version: 1.0+20160930-2
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Afif Elghraoui <afif@debian.org>
Description:
dazzdb - manage nucleotide sequencing read data
Closes: 849433
Changes:
dazzdb (1.0+20160930-2) unstable; urgency=low
.
* Drop rename-simulator.patch in favor of a line in d/rules
* Use LDLIBS rather than LDFLAGS for linking libraries
Thanks to Logan Rosen (Closes: #849433)
* Use debhelper compat 10
* d/rules: remove unnecessary comment
Checksums-Sha1:
287cf4828ba13e836c48d88119142359c0ab5876 754128 dazzdb-dbgsym_1.0+20160930-2_armhf.deb
92288d2646a39ed148c86451aa7b7423dd42030d 4417 dazzdb_1.0+20160930-2_armhf.buildinfo
d25655ee18acdae8670694b66b4e50b5a15a6e9b 97708 dazzdb_1.0+20160930-2_armhf.deb
Checksums-Sha256:
99f548d37459e0415f68399389e2163ecce94e635c2d659ff8788b7f64b11eb3 754128 dazzdb-dbgsym_1.0+20160930-2_armhf.deb
2a5d9fc1c8777ea0d3c3208e903c3557e4b6b577bdbf70fd465aec7c1dccbc90 4417 dazzdb_1.0+20160930-2_armhf.buildinfo
c808b66debf4372a07789c0ac2f9596be71d324d461cdadade4c3022a9180a04 97708 dazzdb_1.0+20160930-2_armhf.deb
Files:
0ec42f111b0e192c765a340df981f7e4 754128 debug extra dazzdb-dbgsym_1.0+20160930-2_armhf.deb
5600a02b59e9cd29f97d84e14451f7b9 4417 science optional dazzdb_1.0+20160930-2_armhf.buildinfo
886fda34d024b8bfa128020337d67015 97708 science optional dazzdb_1.0+20160930-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
dazzdb-dbgsym_1.0+20160930-2_armhf.deb
--------------------------------------
new debian package, version 2.0.
size 754128 bytes: control archive=1264 bytes.
1001 bytes, 13 lines control
1590 bytes, 15 lines md5sums
Package: dazzdb-dbgsym
Source: dazzdb
Version: 1.0+20160930-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 945
Depends: dazzdb (= 1.0+20160930-2)
Section: debug
Priority: extra
Homepage: https://github.com/thegenemyers/DAZZ_DB
Description: Debug symbols for dazzdb
Auto-Built-Package: debug-symbols
Build-Ids: 07d998448adc8526a0167381fee5162e0ad45aad 0dbf68fd9e963ab57fb3b11a4d925668830fa0cc 30bf7039c8ca42b89ad9fa398d7168e25501c1be 36d63f1318fb0bac6d2183d35d0dd5f0172bb66b 37ee5d70b1f9326c7fae53899d67de35939cb2f8 40b480347793da433d4e7566838238979949b8d4 41b0bdec2c245d304f98e059c0a07114acf6df58 4b82db7f3a96e284a5145da995e32e76a2af8c16 569a20e1a8c0641f475dd0787eb045de79702032 58aefbe2a53fb034a974a05387f0f16371beaf9b 6d6ccc57d924b43b52181ab096a673b0439dbb8f 80066952d0bb11367ac36b246b5481c2b33b455a d67c9aeba149bddeecb96c15f7c146fdbc5678f8 e84d914afc7653bba1bf73fb6e58f9ac889a174e eb53358ca12a31461d51539e468c56942536b363
drwxr-xr-x root/root 0 2016-12-27 21:19 ./
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/07/
-rw-r--r-- root/root 9644 2016-12-27 21:19 ./usr/lib/debug/.build-id/07/d998448adc8526a0167381fee5162e0ad45aad.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/0d/
-rw-r--r-- root/root 60752 2016-12-27 21:19 ./usr/lib/debug/.build-id/0d/bf68fd9e963ab57fb3b11a4d925668830fa0cc.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/30/
-rw-r--r-- root/root 66372 2016-12-27 21:19 ./usr/lib/debug/.build-id/30/bf7039c8ca42b89ad9fa398d7168e25501c1be.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/36/
-rw-r--r-- root/root 64308 2016-12-27 21:19 ./usr/lib/debug/.build-id/36/d63f1318fb0bac6d2183d35d0dd5f0172bb66b.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/37/
-rw-r--r-- root/root 65112 2016-12-27 21:19 ./usr/lib/debug/.build-id/37/ee5d70b1f9326c7fae53899d67de35939cb2f8.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/40/
-rw-r--r-- root/root 64512 2016-12-27 21:19 ./usr/lib/debug/.build-id/40/b480347793da433d4e7566838238979949b8d4.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/41/
-rw-r--r-- root/root 75392 2016-12-27 21:19 ./usr/lib/debug/.build-id/41/b0bdec2c245d304f98e059c0a07114acf6df58.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/4b/
-rw-r--r-- root/root 64492 2016-12-27 21:19 ./usr/lib/debug/.build-id/4b/82db7f3a96e284a5145da995e32e76a2af8c16.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/56/
-rw-r--r-- root/root 67704 2016-12-27 21:19 ./usr/lib/debug/.build-id/56/9a20e1a8c0641f475dd0787eb045de79702032.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/58/
-rw-r--r-- root/root 66120 2016-12-27 21:19 ./usr/lib/debug/.build-id/58/aefbe2a53fb034a974a05387f0f16371beaf9b.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/6d/
-rw-r--r-- root/root 63208 2016-12-27 21:19 ./usr/lib/debug/.build-id/6d/6ccc57d924b43b52181ab096a673b0439dbb8f.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/80/
-rw-r--r-- root/root 69368 2016-12-27 21:19 ./usr/lib/debug/.build-id/80/066952d0bb11367ac36b246b5481c2b33b455a.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/d6/
-rw-r--r-- root/root 67848 2016-12-27 21:19 ./usr/lib/debug/.build-id/d6/7c9aeba149bddeecb96c15f7c146fdbc5678f8.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/e8/
-rw-r--r-- root/root 63100 2016-12-27 21:19 ./usr/lib/debug/.build-id/e8/4d914afc7653bba1bf73fb6e58f9ac889a174e.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/lib/debug/.build-id/eb/
-rw-r--r-- root/root 69596 2016-12-27 21:19 ./usr/lib/debug/.build-id/eb/53358ca12a31461d51539e468c56942536b363.debug
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/doc/dazzdb-dbgsym -> dazzdb
dazzdb_1.0+20160930-2_armhf.deb
-------------------------------
new debian package, version 2.0.
size 97708 bytes: control archive=1859 bytes.
2144 bytes, 39 lines control
1096 bytes, 20 lines md5sums
Package: dazzdb
Version: 1.0+20160930-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 785
Depends: libc6 (>= 2.7)
Section: science
Priority: optional
Homepage: https://github.com/thegenemyers/DAZZ_DB
Description: manage nucleotide sequencing read data
To facilitate the multiple phases of the dazzler assembler, all the read data
is organized into what is effectively a database of the
reads and their meta-information. The design goals for this data base
are as follows:
* The database stores the source Pacbio read information in such a
way that it can re-create the original input data, thus permitting
a user to remove the (effectively redundant) source files. This
avoids duplicating the same data, once in the source file and once
in the database.
* The data base can be built up incrementally, that is new sequence
data can be added to the data base over time.
* The data base flexibly allows one to store any meta-data desired for
reads. This is accomplished with the concept of *tracks* that
implementors can add as they need them.
* The data is held in a compressed form equivalent to the .dexta and
.dexqv files of the data extraction module. Both the .fasta and
.quiva information for each read is held in the data base and can be
recreated from it. The .quiva information can be added separately and
later on if desired.
* To facilitate job parallel, cluster operation of the phases of the
assembler, the database has a concept of a *current partitioning* in
which all the reads that are over a given length and optionally
unique to a well, are divided up into *blocks* containing roughly a
given number of bases, except possibly the last block which may have
a short count. Often programs can be run on blocks or pairs of blocks
and each such job is reasonably well balanced as the blocks are all
the same size. One must be careful about changing the partition
during an assembly as doing so can void the structural validity of
any interim block-based results.
drwxr-xr-x root/root 0 2016-12-27 21:19 ./
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/bin/
-rwxr-xr-x root/root 50840 2016-12-27 21:19 ./usr/bin/Catrack
-rwxr-xr-x root/root 50836 2016-12-27 21:19 ./usr/bin/DAM2fasta
-rwxr-xr-x root/root 50840 2016-12-27 21:19 ./usr/bin/DB2fasta
-rwxr-xr-x root/root 50840 2016-12-27 21:19 ./usr/bin/DB2quiva
-rwxr-xr-x root/root 59028 2016-12-27 21:19 ./usr/bin/DBdump
-rwxr-xr-x root/root 54932 2016-12-27 21:19 ./usr/bin/DBdust
-rwxr-xr-x root/root 46736 2016-12-27 21:19 ./usr/bin/DBrm
-rwxr-xr-x root/root 54936 2016-12-27 21:19 ./usr/bin/DBshow
-rwxr-xr-x root/root 50848 2016-12-27 21:19 ./usr/bin/DBsplit
-rwxr-xr-x root/root 54932 2016-12-27 21:19 ./usr/bin/DBstats
-rwxr-xr-x root/root 54956 2016-12-27 21:19 ./usr/bin/dsimulator
-rwxr-xr-x root/root 54948 2016-12-27 21:19 ./usr/bin/fasta2DAM
-rwxr-xr-x root/root 59048 2016-12-27 21:19 ./usr/bin/fasta2DB
-rwxr-xr-x root/root 54960 2016-12-27 21:19 ./usr/bin/quiva2DB
-rwxr-xr-x root/root 9736 2016-12-27 21:19 ./usr/bin/rangen
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/doc/dazzdb/
-rw-r--r-- root/root 244 2015-09-20 10:01 ./usr/share/doc/dazzdb/README.Debian
-rw-r--r-- root/root 9783 2016-09-30 10:59 ./usr/share/doc/dazzdb/README.md.gz
-rw-r--r-- root/root 501 2016-12-27 21:19 ./usr/share/doc/dazzdb/changelog.Debian.gz
-rw-r--r-- root/root 1779 2016-10-12 04:29 ./usr/share/doc/dazzdb/copyright
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/man/
drwxr-xr-x root/root 0 2016-12-27 21:19 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/Catrack.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DAM2fasta.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DB2fasta.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DB2quiva.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DBdump.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DBdust.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DBrm.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DBshow.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DBsplit.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/DBstats.1.gz -> dazzdb.1.gz
-rw-r--r-- root/root 314 2016-12-27 21:19 ./usr/share/man/man1/dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/dsimulator.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/fasta2DAM.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/fasta2DB.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/quiva2DB.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-12-27 21:19 ./usr/share/man/man1/rangen.1.gz -> dazzdb.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 5896
Build-Time: 129
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 267
Job: dazzdb_1.0+20160930-2
Machine Architecture: armhf
Package: dazzdb
Package-Time: 448
Source-Version: 1.0+20160930-2
Space: 5896
Status: successful
Version: 1.0+20160930-2
--------------------------------------------------------------------------------
Finished at 2017-01-07T04:45:30Z
Build needed 00:07:28, 5896k disc space