dazzdb →
1.0+20160930-1 →
armhf → 2016-10-18 10:48:12
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| dazzdb 1.0+20160930-1 (armhf) Tue, 18 Oct 2016 10:39:46 +0000 |
+==============================================================================+
Package: dazzdb
Version: 1.0+20160930-1
Source Version: 1.0+20160930-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-05d5d54f-c375-4243-80aa-82a04b547d66' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9360 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.3 MB]
Fetched 20.7 MB in 22s (922 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/dazzdb.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/dazzdb.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 75.8 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main dazzdb 1.0+20160930-1 (dsc) [1940 B]
Get:2 http://172.17.0.1/private stretch-staging/main dazzdb 1.0+20160930-1 (tar) [69.7 kB]
Get:3 http://172.17.0.1/private stretch-staging/main dazzdb 1.0+20160930-1 (diff) [4220 B]
Fetched 75.8 kB in 0s (1243 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/dazzdb-ZN77me/dazzdb-1.0+20160930' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/dazzdb-ZN77me' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-7EyrwQ/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-7EyrwQ/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Release.gpg [342 B]
Get:4 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Packages [431 B]
Fetched 2079 B in 0s (3497 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dirmngr fuse2fs gnupg-l10n kbd libffi6 libfuse2 libgnutls30 libhogweed4
libldap-2.4-2 libnettle6 libp11-kit0 libsasl2-2 libsasl2-modules
libsasl2-modules-db libssl1.0.2 libtasn1-6 manpages netbase psmisc
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 17 not upgraded.
Need to get 764 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [764 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 764 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 13404 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9)
Filtered Build-Depends: debhelper (>= 9)
dpkg-deb: building package 'sbuild-build-depends-dazzdb-dummy' in '/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive/sbuild-build-depends-dazzdb-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-dazzdb-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Release.gpg [342 B]
Get:4 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Sources [485 B]
Get:5 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ Packages [562 B]
Fetched 2352 B in 0s (4001 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install dazzdb build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dirmngr fuse2fs gnupg-l10n kbd libfuse2 libgnutls30 libhogweed4
libldap-2.4-2 libnettle6 libp11-kit0 libsasl2-2 libsasl2-modules
libsasl2-modules-db libssl1.0.2 libtasn1-6 manpages netbase psmisc
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libbsd0 libcroco3
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libbsd0 libcroco3
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf sbuild-build-depends-dazzdb-dummy
0 upgraded, 31 newly installed, 0 to remove and 17 not upgraded.
Need to get 19.1 MB of archives.
After this operation, 64.3 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-7EyrwQ/apt_archive ./ sbuild-build-depends-dazzdb-dummy 0.invalid.0 [764 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-8 [1087 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.11 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.28-4 [210 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.28-4 [104 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.28-4 [62.7 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libicu57 armhf 57.1-4 [7407 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2 [805 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20160430.1 [72.6 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.028-1 [14.6 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.028-1 [9020 B]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.50.0-2+rpi1 [2523 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-2 [131 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf debhelper all 10.2.2 [826 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package groff-base.
(Reading database ... 13404 files and directories currently installed.)
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Setting up libarchive-zip-perl (1.59-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up groff-base (1.22.3-8) ...
Setting up libglib2.0-0:armhf (2.50.0-2+rpi1) ...
No schema files found: doing nothing.
Setting up gettext-base (0.19.8.1-1) ...
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up m4 (1.4.17-5) ...
Setting up libicu57:armhf (57.1-4) ...
Setting up libbsd0:armhf (0.8.3-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-2) ...
Setting up libmagic-mgc (1:5.28-4) ...
Setting up libmagic1:armhf (1:5.28-4) ...
Setting up libcroco3:armhf (0.6.11-2) ...
Processing triggers for libc-bin (2.24-3) ...
Setting up autotools-dev (20160430.1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up bsdmainutils (9.0.11) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-1) ...
Setting up libfile-stripnondeterminism-perl (0.028-1) ...
Setting up gettext (0.19.8.1-1) ...
Setting up autoconf (2.69-10) ...
Setting up file (1:5.28-4) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up automake (1:1.15-4) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2) ...
Setting up po-debconf (1.0.20) ...
Setting up dh-autoreconf (12) ...
Setting up dh-strip-nondeterminism (0.028-1) ...
Setting up debhelper (10.2.2) ...
Setting up sbuild-build-depends-dazzdb-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-3) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.27-8 dpkg-dev_1.18.10 g++-6_6.2.0-6+rpi1 gcc-6_6.2.0-6+rpi1 libc6-dev_2.24-3 libstdc++-6-dev_6.2.0-6+rpi1 libstdc++6_6.2.0-6+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.3.1 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.8.1-1 autotools-dev_20160430.1 base-files_9.6+rpi1 base-passwd_3.5.40 bash_4.4-1 binutils_2.27-8 bsdmainutils_9.0.11 bsdutils_1:2.28.2-1 build-essential_12.2 bzip2_1.0.6-8 coreutils_8.25-2 cpio_2.11+dfsg-5 cpp_4:6.1.1-1 cpp-6_6.2.0-6+rpi1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_10.2.2 debianutils_4.8 dh-autoreconf_12 dh-strip-nondeterminism_0.028-1 diffutils_1:3.5-1 dirmngr_2.1.15-3 dmsetup_2:1.02.133-1 dpkg_1.18.10 dpkg-dev_1.18.10 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-2 file_1:5.28-4 findutils_4.6.0+git+20160703-2 fuse2fs_1.43.3-1 g++_4:6.1.1-1 g++-6_6.2.0-6+rpi1 gcc_4:6.1.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-6_6.2.0-6+rpi1 gcc-6-base_6.2.0-6+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gnupg_2.1.15-3 gnupg-agent_2.1.15-3 gnupg-l10n_2.1.15-3 gpgv_2.1.15-3 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-5 hostname_3.18 init_1.45 init-system-helpers_1.45 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 kbd_2.0.3-2 klibc-utils_2.0.4-9+rpi1 kmod_22-1.1 libacl1_2.2.52-3 libapparmor1_2.10.95-4+b1 libapt-pkg5.0_1.3.1 libarchive-zip-perl_1.59-1 libasan3_6.2.0-6+rpi1 libassuan0_2.4.3-1 libatomic1_6.2.0-6+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-1 libaudit1_1:2.6.7-1 libblkid1_2.28.2-1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.24-3 libc-dev-bin_2.24-3 libc6_2.24-3 libc6-dev_2.24-3 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.2.0-6+rpi1 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.0-2 libdb5.3_5.3.28-12 libdbus-1-3_1.10.10-1 libdebconfclient0_0.217 libdevmapper1.02.1_2:1.02.133-1 libdpkg-perl_1.18.10 libdrm2_2.4.71-1 libfakeroot_1.21-2 libfdisk1_2.28.2-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.028-1 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.2.0-6+rpi1 libgcc1_1:6.2.0-6+rpi1 libgcrypt20_1.7.3-1 libgdbm3_1.8.3-14 libglib2.0-0_2.50.0-2+rpi1 libgmp10_2:6.1.1+dfsg-1 libgnutls30_3.5.4-2 libgomp1_6.2.0-6+rpi1 libgpg-error0_1.24-1 libhogweed4_3.2-1 libicu57_57.1-4 libidn11_1.33-1 libip4tc0_1.6.0-3 libisl15_0.17.1-1 libklibc_2.0.4-9+rpi1 libkmod2_22-1.1 libksba8_1.3.5-2 libldap-2.4-2_2.4.42+dfsg-2+rpi1+b3 liblz4-1_0.0~r131-2 liblzma5_5.1.1alpha+20120614-2.1 libmagic-mgc_1:5.28-4 libmagic1_1:5.28-4 libmount1_2.28.2-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160917-1 libncursesw5_6.0+20160917-1 libnettle6_3.2-1 libnpth0_1.2-3 libp11-kit0_0.23.2-5 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpcre3_2:8.39-2 libperl5.24_5.24.1~rc3-3 libpipeline1_1.4.1-2 libplymouth4_0.9.2-3 libpng12-0_1.2.54-6 libprocps6_2:3.3.12-2 libreadline6_6.3-9 libsasl2-2_2.1.26.dfsg1-15 libsasl2-modules_2.1.26.dfsg1-15 libsasl2-modules-db_2.1.26.dfsg1-15 libseccomp2_2.3.1-2 libselinux1_2.5-3 libsemanage-common_2.5-1 libsemanage1_2.5-1 libsepol1_2.5-1 libsigsegv2_2.10-5 libsmartcols1_2.28.2-1 libsqlite3-0_3.14.2-1 libss2_1.43.3-1 libssl1.0.2_1.0.2j-1 libstdc++-6-dev_6.2.0-6+rpi1 libstdc++6_6.2.0-6+rpi1 libsystemd0_231-9 libtasn1-6_4.9-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160917-1 libtool_2.4.6-2 libubsan0_6.2.0-6+rpi1 libudev1_231-9 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-5 libuuid1_2.28.2-1 libxml2_2.9.4+dfsg1-2 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.2 lsb-base_9.20160629+rpi1 m4_1.4.17-5 make_4.1-9 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.07-1 mawk_1.3.3-17 mount_2.28.2-1 multiarch-support_2.24-3 ncurses-base_6.0+20160917-1 ncurses-bin_6.0+20160917-1 netbase_5.3 passwd_1:4.2-3.2 patch_2.7.5-1 perl_5.24.1~rc3-3 perl-base_5.24.1~rc3-3 perl-modules-5.24_5.24.1~rc3-3 pinentry-curses_0.9.7-5 po-debconf_1.0.20 procps_2:3.3.12-2 psmisc_22.21-2.1 raspbian-archive-keyring_20120528.2 readline-common_7.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dazzdb-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_231-9 systemd-sysv_231-9 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1 tzdata_2016g-1 udev_231-9 util-linux_2.28.2-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Oct 12 09:03:33 2016 UTC
gpgv: using RSA key 59B2306F3AF9DDC1
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./dazzdb_1.0+20160930-1.dsc
dpkg-source: info: extracting dazzdb in /<<BUILDDIR>>/dazzdb-1.0+20160930
dpkg-source: info: unpacking dazzdb_1.0+20160930.orig.tar.gz
dpkg-source: info: unpacking dazzdb_1.0+20160930-1.debian.tar.xz
dpkg-source: info: applying append-cflags.patch
dpkg-source: info: applying compiler-flags.patch
dpkg-source: info: applying destdir.patch
dpkg-source: info: applying rename-simulator.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-05d5d54f-c375-4243-80aa-82a04b547d66
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package dazzdb
dpkg-buildpackage: info: source version 1.0+20160930-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build dazzdb-1.0+20160930
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel
dh_testdir -O--parallel
dh_auto_clean -O--parallel
make -j4 clean
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
rm -f dsimulator.c
rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm dsimulator fasta2DAM DAM2fasta DBdump rangen
rm -fr *.dSYM
rm -f dazz.db.tar.gz
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_clean -O--parallel
debian/rules build-arch
dh build-arch --parallel
dh_testdir -a -O--parallel
dh_update_autotools_config -a -O--parallel
dh_auto_configure -a -O--parallel
dh_auto_build -a -O--parallel
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm fasta2DB.c DB.c DB.h QV.c QV.h -o fasta2DB
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DB2fasta.c DB.c DB.h QV.c QV.h -o DB2fasta
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -lm quiva2DB.c DB.c DB.h QV.c QV.h -o quiva2DB
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DB2quiva.c DB.c DB.h QV.c QV.h -o DB2quiva
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DBsplit.c DB.c DB.h QV.c QV.h -o DBsplit
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DBdust.c DB.c DB.h QV.c QV.h -o DBdust
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm Catrack.c DB.c DB.h QV.c QV.h -o Catrack
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DBshow.c DB.c DB.h QV.c QV.h -o DBshow
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DBstats.c DB.c DB.h QV.c QV.h -o DBstats
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DBrm.c DB.c DB.h QV.c QV.h -o DBrm
ln simulator.c dsimulator.c
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm fasta2DAM.c DB.c DB.h QV.c QV.h -o fasta2DAM
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DAM2fasta.c DB.c DB.h QV.c QV.h -o DAM2fasta
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm DBdump.c DB.c DB.h QV.c QV.h -o DBdump
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm rangen.c -o rangen
DBdump.c: In function 'main':
DBdump.c:678:33: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
printf("H %ld %s\n",strlen(header),header);
^
DBdump.c:686:33: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
printf("H %ld %s\n",strlen(flist[map]),flist[map]);
^
cc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/dazzdb-1.0+20160930=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -lm dsimulator.c DB.c DB.h QV.c QV.h -o dsimulator
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
QV.c: In function 'Build_Table':
QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
{ uint64 symbol = (uint64) (node->lft);
^
QV.c: In function 'Huffman':
QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
node[value].lft = (HTree *) (uint64) i;
^
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_auto_test -a -O--parallel
fakeroot debian/rules binary-arch
dh binary-arch --parallel
dh_testroot -a -O--parallel
dh_prep -a -O--parallel
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_auto_install
make -j4 install DESTDIR=/<<BUILDDIR>>/dazzdb-1.0\+20160930/debian/dazzdb AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
install -d /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin
install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm dsimulator fasta2DAM DAM2fasta DBdump rangen /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin
make[2]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
mkdir -p /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/share/man/man1
for command in /<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/bin/*; \
do \
ln -s dazzdb.1 \
/<<BUILDDIR>>/dazzdb-1.0+20160930/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \
done
make[1]: Leaving directory '/<<BUILDDIR>>/dazzdb-1.0+20160930'
dh_installdocs -a -O--parallel
dh_installchangelogs -a -O--parallel
dh_installman -a -O--parallel
dh_perl -a -O--parallel
dh_link -a -O--parallel
dh_strip_nondeterminism -a -O--parallel
dh_compress -a -O--parallel
dh_fixperms -a -O--parallel
dh_strip -a -O--parallel
dh_makeshlibs -a -O--parallel
dh_shlibdeps -a -O--parallel
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dazzdb/usr/bin/DBstats debian/dazzdb/usr/bin/DAM2fasta debian/dazzdb/usr/bin/rangen debian/dazzdb/usr/bin/Catrack debian/dazzdb/usr/bin/DBrm debian/dazzdb/usr/bin/DBdust debian/dazzdb/usr/bin/DBdump debian/dazzdb/usr/bin/DB2fasta debian/dazzdb/usr/bin/DBsplit debian/dazzdb/usr/bin/DB2quiva debian/dazzdb/usr/bin/DBshow debian/dazzdb/usr/bin/fasta2DB debian/dazzdb/usr/bin/fasta2DAM debian/dazzdb/usr/bin/quiva2DB debian/dazzdb/usr/bin/dsimulator were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a -O--parallel
dh_gencontrol -a -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O--parallel
dh_builddeb -a -O--parallel
dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+20160930-1_armhf.deb'.
dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+20160930-1_armhf.deb'.
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../dazzdb_1.0+20160930-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build dazzdb-1.0+20160930
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2016-10-18T10:45:54Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
dazzdb_1.0+20160930-1_armhf.changes:
------------------------------------
Format: 1.8
Date: Wed, 12 Oct 2016 01:36:56 -0700
Source: dazzdb
Binary: dazzdb
Architecture: armhf
Version: 1.0+20160930-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Afif Elghraoui <afif@debian.org>
Description:
dazzdb - manage nucleotide sequencing read data
Changes:
dazzdb (1.0+20160930-1) unstable; urgency=medium
.
* Imported Upstream version 1.0+20160930
* Update patches
* Update Standards-Version
* Use encrypted protocols for VCS URLs
* Update email address and copyright years
* Drop manpages and refer to README for program documentation
Checksums-Sha1:
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7291acca09feb99a383e3006411fd20a2ccf0f77 97590 dazzdb_1.0+20160930-1_armhf.deb
Checksums-Sha256:
7e7bab0598716d051d55a2d1fbee868a7429f4f0456c0e0d91417af0426b1c98 754824 dazzdb-dbgsym_1.0+20160930-1_armhf.deb
9931b25fcf7e28d23f91f631d3623fc4826f73cbb88cd176834be1dbb8117dfc 97590 dazzdb_1.0+20160930-1_armhf.deb
Files:
ec0357dffd91c806083c7b46a3f7e78e 754824 debug extra dazzdb-dbgsym_1.0+20160930-1_armhf.deb
88cd8e835259277e47af1443c592c8d2 97590 science optional dazzdb_1.0+20160930-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
dazzdb-dbgsym_1.0+20160930-1_armhf.deb
--------------------------------------
new debian package, version 2.0.
size 754824 bytes: control archive=1260 bytes.
1001 bytes, 13 lines control
1590 bytes, 15 lines md5sums
Package: dazzdb-dbgsym
Source: dazzdb
Version: 1.0+20160930-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 945
Depends: dazzdb (= 1.0+20160930-1)
Section: debug
Priority: extra
Homepage: https://github.com/thegenemyers/DAZZ_DB
Description: Debug symbols for dazzdb
Auto-Built-Package: debug-symbols
Build-Ids: 02575102e5e4c8b71bb18ee131dad6c5b1e915aa 03de78e40c9b6063d164d531b93c17aa06700e70 0ee07f0e431db0716f6b35c3b3f811853e4cb2e5 2eb52ef52376021a1489d14b7edbf08751a2f7ba 38c6b1fc93fce19a20850d5118ed8a35e8e40aad 3e61babb9d1c30913883b8cd59defd6165e5e5a3 5a5c1271dfa8aca050ea2bb0fc55b6fcdd1ef7ff 5c7779cef6de0f2427dc68d6be17c88576a1d0ef 74b87fa7a0f3c43f4ff3a619ad66670526313d53 7e035ae9c464ede56c9824c9328ba959eafade9c c9f3d785a9a099a21d1e0db0232a82c2ccfaa4f9 ddee81406836700c9a3cbeb5fa44548100e5216c e23da1ee61fcd4fa0166ef2979e339f0779082ad ee5e9ad7f7ef5351bd6c4f90d85baf6e0f9c3aca ef5e21fba5eea41ef5eb83d35f6bf43853364f97
drwxr-xr-x root/root 0 2016-10-12 08:36 ./
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/02/
-rw-r--r-- root/root 69364 2016-10-12 08:36 ./usr/lib/debug/.build-id/02/575102e5e4c8b71bb18ee131dad6c5b1e915aa.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/03/
-rw-r--r-- root/root 60748 2016-10-12 08:36 ./usr/lib/debug/.build-id/03/de78e40c9b6063d164d531b93c17aa06700e70.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/0e/
-rw-r--r-- root/root 67852 2016-10-12 08:36 ./usr/lib/debug/.build-id/0e/e07f0e431db0716f6b35c3b3f811853e4cb2e5.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/2e/
-rw-r--r-- root/root 63096 2016-10-12 08:36 ./usr/lib/debug/.build-id/2e/b52ef52376021a1489d14b7edbf08751a2f7ba.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/38/
-rw-r--r-- root/root 66108 2016-10-12 08:36 ./usr/lib/debug/.build-id/38/c6b1fc93fce19a20850d5118ed8a35e8e40aad.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/3e/
-rw-r--r-- root/root 64484 2016-10-12 08:36 ./usr/lib/debug/.build-id/3e/61babb9d1c30913883b8cd59defd6165e5e5a3.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/5a/
-rw-r--r-- root/root 65124 2016-10-12 08:36 ./usr/lib/debug/.build-id/5a/5c1271dfa8aca050ea2bb0fc55b6fcdd1ef7ff.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/5c/
-rw-r--r-- root/root 67712 2016-10-12 08:36 ./usr/lib/debug/.build-id/5c/7779cef6de0f2427dc68d6be17c88576a1d0ef.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/74/
-rw-r--r-- root/root 64508 2016-10-12 08:36 ./usr/lib/debug/.build-id/74/b87fa7a0f3c43f4ff3a619ad66670526313d53.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/7e/
-rw-r--r-- root/root 64312 2016-10-12 08:36 ./usr/lib/debug/.build-id/7e/035ae9c464ede56c9824c9328ba959eafade9c.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/c9/
-rw-r--r-- root/root 9640 2016-10-12 08:36 ./usr/lib/debug/.build-id/c9/f3d785a9a099a21d1e0db0232a82c2ccfaa4f9.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/dd/
-rw-r--r-- root/root 69596 2016-10-12 08:36 ./usr/lib/debug/.build-id/dd/ee81406836700c9a3cbeb5fa44548100e5216c.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/e2/
-rw-r--r-- root/root 75396 2016-10-12 08:36 ./usr/lib/debug/.build-id/e2/3da1ee61fcd4fa0166ef2979e339f0779082ad.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/ee/
-rw-r--r-- root/root 66368 2016-10-12 08:36 ./usr/lib/debug/.build-id/ee/5e9ad7f7ef5351bd6c4f90d85baf6e0f9c3aca.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/lib/debug/.build-id/ef/
-rw-r--r-- root/root 63208 2016-10-12 08:36 ./usr/lib/debug/.build-id/ef/5e21fba5eea41ef5eb83d35f6bf43853364f97.debug
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/doc/dazzdb-dbgsym -> dazzdb
dazzdb_1.0+20160930-1_armhf.deb
-------------------------------
new debian package, version 2.0.
size 97590 bytes: control archive=1862 bytes.
2144 bytes, 39 lines control
1096 bytes, 20 lines md5sums
Package: dazzdb
Version: 1.0+20160930-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 785
Depends: libc6 (>= 2.7)
Section: science
Priority: optional
Homepage: https://github.com/thegenemyers/DAZZ_DB
Description: manage nucleotide sequencing read data
To facilitate the multiple phases of the dazzler assembler, all the read data
is organized into what is effectively a database of the
reads and their meta-information. The design goals for this data base
are as follows:
* The database stores the source Pacbio read information in such a
way that it can re-create the original input data, thus permitting
a user to remove the (effectively redundant) source files. This
avoids duplicating the same data, once in the source file and once
in the database.
* The data base can be built up incrementally, that is new sequence
data can be added to the data base over time.
* The data base flexibly allows one to store any meta-data desired for
reads. This is accomplished with the concept of *tracks* that
implementors can add as they need them.
* The data is held in a compressed form equivalent to the .dexta and
.dexqv files of the data extraction module. Both the .fasta and
.quiva information for each read is held in the data base and can be
recreated from it. The .quiva information can be added separately and
later on if desired.
* To facilitate job parallel, cluster operation of the phases of the
assembler, the database has a concept of a *current partitioning* in
which all the reads that are over a given length and optionally
unique to a well, are divided up into *blocks* containing roughly a
given number of bases, except possibly the last block which may have
a short count. Often programs can be run on blocks or pairs of blocks
and each such job is reasonably well balanced as the blocks are all
the same size. One must be careful about changing the partition
during an assembly as doing so can void the structural validity of
any interim block-based results.
drwxr-xr-x root/root 0 2016-10-12 08:36 ./
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/bin/
-rwxr-xr-x root/root 50840 2016-10-12 08:36 ./usr/bin/Catrack
-rwxr-xr-x root/root 50836 2016-10-12 08:36 ./usr/bin/DAM2fasta
-rwxr-xr-x root/root 50840 2016-10-12 08:36 ./usr/bin/DB2fasta
-rwxr-xr-x root/root 50840 2016-10-12 08:36 ./usr/bin/DB2quiva
-rwxr-xr-x root/root 59028 2016-10-12 08:36 ./usr/bin/DBdump
-rwxr-xr-x root/root 54932 2016-10-12 08:36 ./usr/bin/DBdust
-rwxr-xr-x root/root 46736 2016-10-12 08:36 ./usr/bin/DBrm
-rwxr-xr-x root/root 54936 2016-10-12 08:36 ./usr/bin/DBshow
-rwxr-xr-x root/root 50848 2016-10-12 08:36 ./usr/bin/DBsplit
-rwxr-xr-x root/root 54932 2016-10-12 08:36 ./usr/bin/DBstats
-rwxr-xr-x root/root 54956 2016-10-12 08:36 ./usr/bin/dsimulator
-rwxr-xr-x root/root 54948 2016-10-12 08:36 ./usr/bin/fasta2DAM
-rwxr-xr-x root/root 59048 2016-10-12 08:36 ./usr/bin/fasta2DB
-rwxr-xr-x root/root 54960 2016-10-12 08:36 ./usr/bin/quiva2DB
-rwxr-xr-x root/root 9736 2016-10-12 08:36 ./usr/bin/rangen
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/doc/dazzdb/
-rw-r--r-- root/root 244 2015-09-20 10:01 ./usr/share/doc/dazzdb/README.Debian
-rw-r--r-- root/root 9783 2016-09-30 10:59 ./usr/share/doc/dazzdb/README.md.gz
-rw-r--r-- root/root 337 2016-10-12 08:36 ./usr/share/doc/dazzdb/changelog.Debian.gz
-rw-r--r-- root/root 1779 2016-10-12 04:29 ./usr/share/doc/dazzdb/copyright
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/man/
drwxr-xr-x root/root 0 2016-10-12 08:36 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/Catrack.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DAM2fasta.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DB2fasta.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DB2quiva.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DBdump.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DBdust.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DBrm.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DBshow.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DBsplit.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/DBstats.1.gz -> dazzdb.1.gz
-rw-r--r-- root/root 314 2016-10-12 08:36 ./usr/share/man/man1/dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/dsimulator.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/fasta2DAM.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/fasta2DB.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/quiva2DB.1.gz -> dazzdb.1.gz
lrwxrwxrwx root/root 0 2016-10-12 08:36 ./usr/share/man/man1/rangen.1.gz -> dazzdb.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 5896
Build-Time: 123
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 202
Job: dazzdb_1.0+20160930-1
Machine Architecture: armhf
Package: dazzdb
Package-Time: 368
Source-Version: 1.0+20160930-1
Space: 5896
Status: successful
Version: 1.0+20160930-1
--------------------------------------------------------------------------------
Finished at 2016-10-18T10:45:54Z
Build needed 00:06:08, 5896k disc space