cmtk →
3.3.1p1+dfsg-2 →
armhf → 2019-11-16 06:22:01
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| cmtk 3.3.1p1+dfsg-2 (armhf) Sat, 16 Nov 2019 05:58:16 +0000 |
+==============================================================================+
Package: cmtk
Version: 3.3.1p1+dfsg-2
Source Version: 3.3.1p1+dfsg-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-b90ed199-96ea-441f-8b08-c38104b8238d' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.4 MB in 10s (2489 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'cmtk' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/neurodebian-team/cmtk.git
Please use:
git clone https://salsa.debian.org/neurodebian-team/cmtk.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1067 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main cmtk 3.3.1p1+dfsg-2 (dsc) [2255 B]
Get:2 http://172.17.0.1/private bullseye-staging/main cmtk 3.3.1p1+dfsg-2 (tar) [1055 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main cmtk 3.3.1p1+dfsg-2 (diff) [9788 B]
Fetched 1067 kB in 0s (3221 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/cmtk-2QMxS7/cmtk-3.3.1p1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/cmtk-2QMxS7' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-QSORpl/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-QSORpl/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-QSORpl/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (9628 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12227 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth
Filtered Build-Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev, libdcmtk-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev, libwrap0-dev, libcharls-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth
dpkg-deb: building package 'sbuild-build-depends-cmtk-dummy' in '/<<BUILDDIR>>/resolver-QSORpl/apt_archive/sbuild-build-depends-cmtk-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-cmtk-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Sources [598 B]
Get:5 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ Packages [662 B]
Fetched 2593 B in 0s (11.7 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install cmtk build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data
dc debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libbrotli1 libbsd0 libbz2-dev libcharls-dev libcharls2
libcroco3 libcurl4 libdcmtk-dev libdcmtk14 libdebhelper-perl libdrm-amdgpu1
libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1
libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3
libfile-stripnondeterminism-perl libfontenc1 libfreetype6 libgl1
libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0
libgssapi-krb5-2 libice6 libicu-dev libicu63 libjbig-dev libjbig0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp1 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 libllvm9 liblzma-dev libmagic-mgc
libmagic1 libmxml-dev libmxml1 libncurses6 libncursesw6 libnghttp2-14
libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libprocps7 libpsl5
librhash0 librtmp1 libsensors-config libsensors5 libsigsegv2 libsm6
libsqlite3-dev libssh2-1 libssl-dev libssl1.1 libsub-override-perl
libtiff-dev libtiff5 libtiffxx5 libtinfo5 libtinfo6 libtool libuchardet0
libunwind8 libuv1 libwebp6 libwrap0 libwrap0-dev libx11-6 libx11-data
libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
libxcb-present0 libxcb-sync1 libxcb1 libxdamage1 libxdmcp6 libxext6
libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1
libxpm4 libxshmfence1 libxt6 libxxf86vm1 m4 man-db po-debconf procps
sensible-utils x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip dcmtk-doc libfftw3-doc krb5-doc krb5-user
icu-doc liblzma-doc lm-sensors sqlite3-doc libssl-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk pkg-config m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx bzip2-doc ca-certificates libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libmxml-bin
libgpm2 libpng-tools publicsuffix libltdl-dev libmail-sendmail-perl psmisc
xfonts-base
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data
dc debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libbrotli1 libbsd0 libbz2-dev libcharls-dev libcharls2
libcroco3 libcurl4 libdcmtk-dev libdcmtk14 libdebhelper-perl libdrm-amdgpu1
libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1
libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3
libfile-stripnondeterminism-perl libfontenc1 libfreetype6 libgl1
libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0
libgssapi-krb5-2 libice6 libicu-dev libicu63 libjbig-dev libjbig0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp1 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 libllvm9 liblzma-dev libmagic-mgc
libmagic1 libmxml-dev libmxml1 libncurses6 libnghttp2-14 libpipeline1
libpixman-1-0 libpng-dev libpng16-16 libprocps7 libpsl5 librhash0 librtmp1
libsensors-config libsensors5 libsigsegv2 libsm6 libsqlite3-dev libssh2-1
libssl-dev libssl1.1 libsub-override-perl libtiff-dev libtiff5 libtiffxx5
libtinfo5 libtool libuchardet0 libunwind8 libuv1 libwebp6 libwrap0
libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0
libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb1 libxdamage1
libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev
libxmu6 libxmuu1 libxpm4 libxshmfence1 libxt6 libxxf86vm1 m4 man-db
po-debconf procps sbuild-build-depends-cmtk-dummy sensible-utils x11-common
x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev
The following packages will be upgraded:
libncursesw6 libtinfo6
2 upgraded, 141 newly installed, 0 to remove and 33 not upgraded.
Need to get 78.2 MB of archives.
After this operation, 773 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-QSORpl/apt_archive ./ sbuild-build-depends-cmtk-dummy 0.invalid.0 [948 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-1 [1261 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libtinfo6 armhf 6.1+20191019-1 [320 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libncursesw6 armhf 6.1+20191019-1 [104 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20191019-1 [79.5 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libprocps7 armhf 2:3.3.15-2 [58.9 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.15-2 [235 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf bc armhf 1.07.1-2+b1 [101 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf dc armhf 1.07.1-2+b1 [67.6 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.37-6 [253 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.37-6 [111 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.37-6 [66.2 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.13.4-1 [1476 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b2 [571 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.0-1+b1 [292 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-5 [257 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6-6 [14.0 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.39.2-1 [71.3 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.66.0-1+b1 [297 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3 [66.2 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.3.8-1 [132 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.33.1-2 [112 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.13.4-1 [2559 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-11 [547 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-1 [104 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.1-1 [23.5 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.1-1 [14.4 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-2 [136 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.7.1 [173 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.2-3 [1137 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.7.1 [997 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-2 [163 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libcharls2 armhf 2.0.0+dfsg-1 [52.0 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libcharls-dev armhf 2.0.0+dfsg-1 [8016 B]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-2 [8846 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libxml2-dev armhf 2.9.4+dfsg1-7+b2 [641 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libssl-dev armhf 1.1.1d-2 [1570 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-1 [274 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-1 [275 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libwrap0 armhf 7.6.q-28 [56.0 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libwrap0-dev armhf 7.6.q-28 [18.5 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libjbig-dev armhf 2.1-3.1+b2 [27.7 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0-1 [249 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libtiffxx5 armhf 4.1.0-1 [117 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libtiff-dev armhf 4.1.0-1 [362 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libdcmtk14 armhf 3.6.4-2.1 [3718 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libdcmtk-dev armhf 3.6.4-2.1 [950 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.99-1+rpi1 [14.1 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.99-1+rpi1 [36.3 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.99-1+rpi1 [26.5 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.99-1+rpi1 [24.5 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.99-1+rpi1 [28.7 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191025-1 [79.3 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-single3 armhf 3.3.8-2 [633 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-bin armhf 3.3.8-2 [43.6 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-dev armhf 3.3.8-2 [1060 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libfontenc1 armhf 1:1.1.3-1 [22.2 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.1.0-1 [54.5 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 19.2.3-1 [78.0 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.6.8-1 [190 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.13.1-2 [100 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.13.1-2 [100 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.13.1-2 [114 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.13.1-2 [99.1 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.13.1-2 [102 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-1 [15.1 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libllvm9 armhf 1:9-1+rpi1 [13.1 MB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.6.0-2 [32.0 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.6.0-2 [50.2 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 19.2.3-1 [5598 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 19.2.3-1 [169 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.1.0-1 [24.6 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.1.0-1 [107 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libmxml1 armhf 3.1-1 [25.0 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libmxml-dev armhf 3.1-1 [721 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.30.1-1 [698 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libunwind8 armhf 1.2.1-9 [48.3 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libxfont2 armhf 1:2.0.3-1 [120 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libxkbfile1 armhf 1:1.0.9-2 [65.4 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf x11-xkb-utils armhf 7.7+4 [138 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf xkb-data all 2.26-2 [681 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf xserver-common all 2:1.20.4-1 [2235 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf xvfb armhf 2:1.20.4-1 [2837 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libkeyutils1:armhf (1.6-6) ...
Setting up libpsl5:armhf (0.20.2-2) ...
Setting up libfftw3-single3:armhf (3.3.8-2) ...
Setting up libmagic-mgc (1:5.37-6) ...
Setting up libcharls2:armhf (2.0.0+dfsg-1) ...
Setting up libarchive-zip-perl (1.67-1) ...
Setting up libglib2.0-0:armhf (2.62.2-3) ...
No schema files found: doing nothing.
Setting up libglvnd0:armhf (1.1.0-1) ...
Setting up libssl1.1:armhf (1.1.1d-2) ...
Setting up libprocps7:armhf (2:3.3.15-2) ...
Setting up libdebhelper-perl (12.7.1) ...
Setting up libbrotli1:armhf (1.0.7-5) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libsensors-config (1:3.6.0-2) ...
Setting up libnghttp2-14:armhf (1.39.2-1) ...
Setting up libmagic1:armhf (1:5.37-6) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up xkb-data (2.26-2) ...
Setting up file (1:5.37-6) ...
Setting up libunwind8:armhf (1.2.1-9) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up libkrb5support0:armhf (1.17-6+b1) ...
Setting up libfontenc1:armhf (1:1.1.3-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libuv1:armhf (1.33.1-2) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libsqlite3-dev:armhf (3.30.1-1) ...
Setting up libwrap0:armhf (7.6.q-28) ...
Setting up libx11-data (2:1.6.8-1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libncurses6:armhf (6.1+20191019-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libssl-dev:armhf (1.1.1d-2) ...
Setting up libpng16-16:armhf (1.6.37-1) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-2) ...
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Setting up libk5crypto3:armhf (1.17-6+b1) ...
Setting up libfftw3-double3:armhf (3.3.8-2) ...
Setting up libglapi-mesa:armhf (19.2.3-1) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up sensible-utils (0.0.12) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up librhash0:armhf (1.3.8-1) ...
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Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up procps (2:3.3.15-2) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up libsub-override-perl (0.09-2) ...
Setting up dc (1.07.1-2+b1) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
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Setting up libkrb5-3:armhf (1.17-6+b1) ...
Setting up libtiff5:armhf (4.1.0-1) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.1+20191019-1) ...
Setting up libdrm-common (2.4.99-1+rpi1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-2) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7+b2) ...
Setting up libjsoncpp1:armhf (1.7.4-3) ...
Setting up libtiffxx5:armhf (4.1.0-1) ...
Setting up libbz2-dev:armhf (1.0.8-2) ...
Setting up libfile-stripnondeterminism-perl (1.6.1-1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libcharls-dev:armhf (2.0.0+dfsg-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libdcmtk14 (3.6.4-2.1) ...
Setting up libmxml-dev:armhf (3.1-1) ...
Setting up libtool (2.4.6-11) ...
Setting up libarchive13:armhf (3.4.0-1+b1) ...
Setting up libfftw3-bin (3.3.8-2) ...
Setting up libxcb-glx0:armhf (1.13.1-2) ...
Setting up libedit2:armhf (3.1-20191025-1) ...
Setting up libpng-dev:armhf (1.6.37-1) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libjbig-dev:armhf (2.1-3.1+b2) ...
Setting up bc (1.07.1-2+b1) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-present0:armhf (1.13.1-2) ...
Setting up libxml2-dev:armhf (2.9.4+dfsg1-7+b2) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up libtiff-dev:armhf (4.1.0-1) ...
Setting up libxcb-sync1:armhf (1.13.1-2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11) ...
Setting up libxcb-dri2-0:armhf (1.13.1-2) ...
Setting up libdrm2:armhf (2.4.99-1+rpi1) ...
Setting up dwz (0.13-2) ...
Setting up groff-base (1.22.4-3) ...
Setting up libcurl4:armhf (7.66.0-1+b1) ...
Setting up libx11-6:armhf (2:1.6.8-1) ...
Setting up libxkbfile1:armhf (1:1.0.9-2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxfont2:armhf (1:2.0.3-1) ...
Setting up libfftw3-dev:armhf (3.3.8-2) ...
Setting up libllvm9:armhf (1:9-1+rpi1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up libdrm-amdgpu1:armhf (2.4.99-1+rpi1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:armhf (1.13.1-2) ...
Setting up libdrm-nouveau2:armhf (2.4.99-1+rpi1) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libdcmtk-dev (3.6.4-2.1) ...
Setting up libdrm-radeon1:armhf (2.4.99-1+rpi1) ...
Setting up libgl1-mesa-dri:armhf (19.2.3-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up man-db (2.9.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up xauth (1:1.0.10-1) ...
Setting up cmake (3.13.4-1) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up libxdamage1:armhf (1:1.1.5-1) ...
Setting up po-debconf (1.0.21) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up libglx-mesa0:armhf (19.2.3-1) ...
Setting up libglx0:armhf (1.1.0-1) ...
Setting up x11-xkb-utils (7.7+4) ...
Setting up libgl1:armhf (1.1.0-1) ...
Setting up xserver-common (2:1.20.4-1) ...
Setting up xvfb (2:1.20.4-1) ...
Setting up debhelper (12.7.1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.6.1-1) ...
Setting up sbuild-build-depends-cmtk-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-2+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-58-generic armhf (armv8l)
Toolchain package versions: binutils_2.32.51.20190909-1+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-8+rpi1 gcc-9_9.2.1-8+rpi1 libc6-dev_2.29-2+rpi1 libstdc++-9-dev_9.2.1-8+rpi1 libstdc++6_9.2.1-8+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.46 bash_5.0-4 bc_1.07.1-2+b1 binutils_2.32.51.20190909-1+rpi1 binutils-arm-linux-gnueabihf_2.32.51.20190909-1+rpi1 binutils-common_2.32.51.20190909-1+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-3 cpp_4:9.2.1-3+rpi1 cpp-9_9.2.1-8+rpi1 dash_0.5.10.2-6 dc_1.07.1-2+b1 debconf_1.5.73 debhelper_12.7.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.1-1 diffutils_1:3.7-3 dirmngr_2.2.17-3+b1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-2 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 g++_4:9.2.1-3+rpi1 g++-9_9.2.1-8+rpi1 gcc_4:9.2.1-3+rpi1 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-6-base_6.5.0-1+rpi1+b3 gcc-9_9.2.1-8+rpi1 gcc-9-base_9.2.1-8+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.17-3 gnupg-l10n_2.2.17-3 gnupg-utils_2.2.17-3+b1 gpg_2.2.17-3+b1 gpg-agent_2.2.17-3+b1 gpg-wks-client_2.2.17-3+b1 gpg-wks-server_2.2.17-3+b1 gpgconf_2.2.17-3+b1 gpgsm_2.2.17-3+b1 gpgv_2.2.17-3+b1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.22 icu-devtools_63.2-2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-2 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libarchive13_3.4.0-1+b1 libasan5_9.2.1-8+rpi1 libassuan0_2.5.3-7 libatomic1_9.2.1-8+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libbinutils_2.32.51.20190909-1+rpi1 libblkid1_2.34-0.1 libbrotli1_1.0.7-5 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.29-2+rpi1 libc-dev-bin_2.29-2+rpi1 libc6_2.29-2+rpi1 libc6-dev_2.29-2+rpi1 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcap2-bin_1:2.25-2 libcc1-0_9.2.1-8+rpi1 libcharls-dev_2.0.0+dfsg-1 libcharls2_2.0.0+dfsg-1 libcom-err2_1.45.4-1 libcroco3_0.6.13-1 libcurl4_7.66.0-1+b1 libdb5.3_5.3.28+dfsg1-0.6 libdcmtk-dev_3.6.4-2.1 libdcmtk14_3.6.4-2.1 libdebconfclient0_0.249 libdebhelper-perl_12.7.1 libdpkg-perl_1.19.7 libdrm-amdgpu1_2.4.99-1+rpi1 libdrm-common_2.4.99-1+rpi1 libdrm-nouveau2_2.4.99-1+rpi1 libdrm-radeon1_2.4.99-1+rpi1 libdrm2_2.4.99-1+rpi1 libedit2_3.1-20191025-1 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfftw3-bin_3.3.8-2 libfftw3-dev_3.3.8-2 libfftw3-double3_3.3.8-2 libfftw3-single3_3.3.8-2 libfile-stripnondeterminism-perl_1.6.1-1 libfontenc1_1:1.1.3-1 libfreetype6_2.10.1-2 libgcc-9-dev_9.2.1-8+rpi1 libgcc1_1:9.2.1-8+rpi1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgl1_1.1.0-1 libgl1-mesa-dri_19.2.3-1 libglapi-mesa_19.2.3-1 libglib2.0-0_2.62.2-3 libglvnd0_1.1.0-1 libglx-mesa0_19.2.3-1 libglx0_1.1.0-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.10-4 libgomp1_9.2.1-8+rpi1 libgpg-error0_1.36-7 libgssapi-krb5-2_1.17-6+b1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_63.2-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libisl19_0.20-2 libisl21_0.21-2 libjbig-dev_2.1-3.1+b2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjsoncpp1_1.7.4-3 libk5crypto3_1.17-6+b1 libkeyutils1_1.6-6 libkrb5-3_1.17-6+b1 libkrb5support0_1.17-6+b1 libksba8_1.3.5-2 libldap-2.4-2_2.4.48+dfsg-1+b1 libldap-common_2.4.48+dfsg-1 libllvm9_1:9-1+rpi1 liblz4-1_1.9.1-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmxml-dev_3.1-1 libmxml1_3.1-1 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.39.2-1 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-cap_1:2.25-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5 libpcre3_2:8.39-12 libperl5.30_5.30.0-7 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-1 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libreadline7_7.0-5 libreadline8_8.0-3 librhash0_1.3.8-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-1+b1 libsasl2-modules-db_2.1.27+dfsg-1+b1 libseccomp2_2.4.1-2+rpi1 libselinux1_2.9-2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsensors-config_1:3.6.0-2 libsensors5_1:3.6.0-2 libsepol1_2.9-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsqlite3-0_3.30.1-1 libsqlite3-dev_3.30.1-1 libss2_1.45.4-1 libssh2-1_1.8.0-2.1 libssl-dev_1.1.1d-2 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-8+rpi1 libstdc++6_9.2.1-8+rpi1 libsub-override-perl_0.09-2 libsystemd0_242-7+rpi1 libtasn1-6_4.14-3 libtiff-dev_4.1.0-1 libtiff5_4.1.0-1 libtiffxx5_4.1.0-1 libtinfo5_6.1+20191019-1 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libubsan1_9.2.1-8+rpi1 libuchardet0_0.0.6-3 libudev1_242-7+rpi1 libunistring2_0.9.10-2 libunwind8_1.2.1-9 libuuid1_2.34-0.1 libuv1_1.33.1-2 libwebp6_0.6.1-2 libwrap0_7.6.q-28 libwrap0-dev_7.6.q-28 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libx11-xcb1_2:1.6.8-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-dri2-0_1.13.1-2 libxcb-dri3-0_1.13.1-2 libxcb-glx0_1.13.1-2 libxcb-present0_1.13.1-2 libxcb-sync1_1.13.1-2 libxcb1_1.13.1-2 libxdamage1_1:1.1.5-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxfont2_1:2.0.3-1 libxkbfile1_1:1.0.9-2 libxml2_2.9.4+dfsg1-7+b2 libxml2-dev_2.9.4+dfsg1-7+b2 libxmu6_2:1.1.2-2+b3 libxmuu1_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1+b3 libxxf86vm1_1:1.1.4-1+b2 libzstd1_1.4.3+dfsg-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17 mount_2.34-0.1 ncurses-base_6.1+20190803-1 ncurses-bin_6.1+20190803-1 netbase_5.6 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-7 perl-base_5.30.0-7 perl-modules-5.30_5.30.0-7 pinentry-curses_1.1.0-3 po-debconf_1.0.21 procps_2:3.3.15-2 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-cmtk-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96~beta-3 tar_1.30+dfsg-6 tzdata_2019c-3 util-linux_2.34-0.1 x11-common_1:7.7+20 x11-xkb-utils_7.7+4 xauth_1:1.0.10-1 xkb-data_2.26-2 xserver-common_2:1.20.4-1 xvfb_2:1.20.4-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Nov 11 12:17:21 2019 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./cmtk_3.3.1p1+dfsg-2.dsc
dpkg-source: info: extracting cmtk in /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg
dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg.orig.tar.xz
dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep
dpkg-source: info: applying reproducible_build
dpkg-source: info: applying fix_cmake_version_comparison
dpkg-source: info: applying dcmtk-3.6.1-compatibility
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-b90ed199-96ea-441f-8b08-c38104b8238d
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package cmtk
dpkg-buildpackage: info: source version 3.3.1p1+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh: warning: invalid flag in DEB_BUILD_OPTIONS: "
dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck"
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_auto_clean
rm -rf debian/manpages
make[1]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/cmtk.substvars debian/files
rm -fr -- debian/cmtk/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules build-arch
dh build-arch
dh: warning: invalid flag in DEB_BUILD_OPTIONS: "
dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck"
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_auto_configure -- \
-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
-DBUILD_APPS:BOOL=ON \
-DBUILD_DOCUMENTATION:BOOL=OFF \
-DBUILD_GUI:BOOL=OFF \
-DBUILD_SHARED_LIBS:BOOL=ON \
-DBUILD_TESTING:BOOL=OFF \
-DCMTK_BUILD_DCMTK:BOOL=OFF \
-DCMTK_BUILD_MXML:BOOL=OFF \
-DCMTK_BUILD_NRRD:BOOL=ON \
-DCMTK_BUILD_SQLITE:BOOL=OFF \
-DCMTK_BUILD_ZLIB:BOOL=OFF \
-DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \
-DCMTK_USE_DCMTK:BOOL=ON \
-DCMTK_USE_FFTW:BOOL=ON \
-DCMTK_USE_QT:BOOL=OFF \
-DCMTK_USE_SMP:BOOL=ON \
-DCMTK_USE_SQLITE:BOOL=ON \
-DDART_TESTING_TIMEOUT:STRING=15000 \
-DMXML_INCLUDE_DIR:PATH=/usr/include \
-DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \
-DCMAKE_SKIP_RPATH:BOOL=OFF \
-DCMTK_BUILD_WRAPPER:BOOL=ON \
install -d obj-arm-linux-gnueabihf
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=OFF -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON ..
-- The C compiler identification is GNU 9.2.1
-- The CXX compiler identification is GNU 9.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of void*
-- Check size of void* - done
-- Check size of char
-- Check size of char - done
-- Check size of short
-- Check size of short - done
-- Check size of float
-- Check size of float - done
-- Check size of double
-- Check size of double - done
-- Looking for limits.h
-- Looking for limits.h - found
-- Looking for unistd.h
-- Looking for unistd.h - found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for include files sys/types.h, sys/prctl.h
-- Looking for include files sys/types.h, sys/prctl.h - found
-- Check if the system is big endian
-- Searching 16 bit integer
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for C++ include iostream
-- Looking for C++ include iostream - found
-- Check for STD namespace
-- Check for STD namespace - found
-- Check for ANSI scope
-- Check for ANSI scope - found
-- Check for sstream
-- Check for sstream - found
-- System is Linux-4.15.0-58-generic
-- Looking for include file dirent.h
-- Looking for include file dirent.h - found
-- Looking for include file execinfo.h
-- Looking for include file execinfo.h - found
-- Looking for include file fcntl.h
-- Looking for include file fcntl.h - found
-- Looking for include file ieeefp.h
-- Looking for include file ieeefp.h - not found
-- Looking for include file inttypes.h
-- Looking for include file inttypes.h - found
-- Looking for include file malloc.h
-- Looking for include file malloc.h - found
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for include file termios.h
-- Looking for include file termios.h - found
-- Looking for include file unistd.h
-- Looking for include file unistd.h - found
-- Looking for include file values.h
-- Looking for include file values.h - found
-- Looking for include file sys/ioctl.h
-- Looking for include file sys/ioctl.h - found
-- Looking for include file sys/procfs.h
-- Looking for include file sys/procfs.h - found
-- Looking for include file sys/stat.h
-- Looking for include file sys/stat.h - found
-- Looking for include file sys/time.h
-- Looking for include file sys/time.h - found
-- Looking for include file sys/times.h
-- Looking for include file sys/times.h - found
-- Looking for include file sys/utsname.h
-- Looking for include file sys/utsname.h - found
-- Check size of ((struct stat*)0)->st_mode
-- Check size of ((struct stat*)0)->st_mode - done
-- Check size of struct stat64
-- Check size of struct stat64 - failed
-- Check if the system is big endian
-- Searching 16 bit integer
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Check the value of the 22nd bit of a 32-bit quiet-NaN
-- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1
-- Looking for C++ include unordered_map
-- Looking for C++ include unordered_map - found
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Looking for include file dispatch/dispatch.h
-- Looking for include file dispatch/dispatch.h - not found
-- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE
-- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11")
-- Using system zlib
-- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0)
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Found system libbz2
-- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS)
-- Found DCMTK: /usr/include/dcmtk/config
-- - tested library png
-- - tested library tiff
-- - tested library CharLS
-- Using system DCMTK library.
-- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE)
-- Found SQLite3: /usr/lib/arm-linux-gnueabihf/libsqlite3.so
-- Using system sqlite3 library
-- Check size of long long
-- Check size of long long - done
-- Looking for strdup
-- Looking for strdup - found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for vsnprintf
-- Looking for vsnprintf - found
CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES):
Policy CMP0033 is not set: The export_library_dependencies command should
not be called. Run "cmake --help-policy CMP0033" for policy details. Use
the cmake_policy command to set the policy and suppress this warning.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Configuring done
-- Generating done
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[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o
[ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enumsNrrd.c
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c
[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o
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[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o
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[ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o
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[ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o
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cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c
[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx
[ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/dio.c
[ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o
[ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/format.c
[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx
[ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseNrrd.c
[ 4%] Linking C shared library ../../bin/libcmtkMxml.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1
/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 4%] Built target cmtkMxml
make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color=
Scanning dependencies of target cmtkSystem
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make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 4%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx
[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatEPS.c
[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o
[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatNRRD.c
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encoding.c
[ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception )
| ^~~~~
[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNG.c
[ 5%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx
[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingBzip2.c
[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNM.c
[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/accessors.c
[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingGzip.c
[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx
[ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatText.c
[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/array.c
[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingHex.c
[ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx
[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatVTK.c
[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/read.c
[ 9%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx
[ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx
[ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/arraysNrrd.c
[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingRaw.c
[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/gzio.c
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx
[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/reorder.c
[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx
[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/write.c
[ 10%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx
[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx
[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx
[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianAir.c
[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/keyvalue.c
[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx
[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffbiff.c
[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffmsg.c
[ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx
[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianNrrd.c
[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/methodsNrrd.c
[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/sane.c
[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enum.c
[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx
[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/miscAir.c
[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/simple.c
[ 14%] Linking C shared library ../../bin/libNrrdIO.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1
/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target NrrdIO
[ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx
[ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx
[ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx
[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx:31:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx:34:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx
[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n";
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:34:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx
[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx
[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx:34:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx:34:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx
[ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx
[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx
[ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx
[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx
[ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx
[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx
[ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx
[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamZlib.cxx
[ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx
[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkConsole.cxx
[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx
[ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx: In function 'std::string cmtk::FileUtils::GetAbsolutePath(const string&)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of 'char* getcwd(char*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
147 | getcwd( absPath, PATH_MAX );
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkMemory.cxx
[ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx
[ 20%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx
[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkMountPoints.cxx
[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgress.cxx
[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgressConsole.cxx
[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx
[ 21%] Linking CXX shared library ../../bin/libcmtkNumerics.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,:::::::::::::
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target cmtkNumerics
[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx
[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx
[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx
[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadPoolThreads.cxx
[ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadSemaphore.cxx
[ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkTimers.cxx
[ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx
[ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Built target cmtkSystem
make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color=
Scanning dependencies of target cmtkBase
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o
[ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o
[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o
[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveShapeModel.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXform.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx
[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx
[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx
[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx
[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkBitVector.cxx
[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx
[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx
[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid_Crop.cxx
[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx
[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx
[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx
[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx
[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField.cxx
[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx:35:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx:35:
/usr/include/c++/9/bits/stl_vector.h: In function '_ZNK4cmtk14DataGridFilter17ApplyRegionFilterINS0_12MeanOperatorEEENS_12SmartPointerINS_10TypedArrayEEExxx._omp_fn.0':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function '_ZNK4cmtk14DataGridFilter17ApplyRegionFilterINS0_16VarianceOperatorEEENS_12SmartPointerINS_10TypedArrayEEExxx._omp_fn.0':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function '_ZNK4cmtk14DataGridFilter17ApplyRegionFilterINS0_25StandardDeviationOperatorEEENS_12SmartPointerINS_10TypedArrayEEExxx._omp_fn.0':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function '_ZNK4cmtk14DataGridFilter17ApplyRegionFilterINS0_18SmoothnessOperatorEEENS_12SmartPointerINS_10TypedArrayEEExxx._omp_fn.0':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function '_ZNK4cmtk14DataGridFilter17ApplyRegionFilterINS0_19ThirdMomentOperatorEEENS_12SmartPointerINS_10TypedArrayEEExxx._omp_fn.0':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx:35:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx:35:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx:35:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In static member function 'static cmtk::Types::DataItem cmtk::DataGridFilter::MedianOperator::Reduce(std::vector<double>&)':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx:35:
/usr/include/c++/9/bits/stl_vector.h: In function '_ZNK4cmtk14DataGridFilter17ApplyRegionFilterINS0_14MedianOperatorEEENS_12SmartPointerINS_10TypedArrayEEExxx._omp_fn.0':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDirectionSet.cxx
[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFilterVolume.cxx
[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToLandmarks.cxx
[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx
[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToXformList.cxx
[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx
[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx
[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx
[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx
[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx
[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitToXformListBase.cxx
[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.cxx
[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkGeneralLinearModel.cxx
[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx
[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHypothesisTests.cxx
[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.cxx
[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx
[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx
[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx
[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function 'virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long long int' [-Wformat=]
41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:27: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=]
41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:30: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=]
41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:33: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=]
41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:36: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long long int' [-Wformat=]
41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:39: warning: format '%d' expects argument of type 'int', but argument 7 has type 'long long int' [-Wformat=]
41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] );
| ~^
| |
| int
| %lld
[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function 'static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format '%d' expects argument of type 'int*', but argument 3 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=]
54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ );
| ~~^ ~~~~~~~~~
| | |
| int* cmtk::Types::GridIndexType* {aka long long int*}
| %5lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:47: warning: format '%d' expects argument of type 'int*', but argument 4 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=]
54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ );
| ~~^ ~~~~~~~~~
| | |
| int* cmtk::Types::GridIndexType* {aka long long int*}
| %5lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:51: warning: format '%d' expects argument of type 'int*', but argument 5 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=]
54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ );
| ~~^ ~~~~~~~~~
| | |
| int* cmtk::Types::GridIndexType* {aka long long int*}
| %5lld
[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx
[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx
[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx:34:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.h:37,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.h:37,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImageOperationMapValues::ImageOperationMapValues(const char*, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx
[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx
[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx
[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogram.cxx
[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogramBase.cxx
[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmark.cxx
[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPair.cxx
[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkList.cxx
[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPairList.cxx
[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051.cxx
[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx
[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathFunctionWrappers.cxx
[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx
[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Random.cxx
[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Statistics.cxx
[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix3x3.cxx
[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix4x4.cxx
[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx
[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx
[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkPolynomialXform.cxx
[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImage.cxx
[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImageGradientField.cxx
[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx
[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform.cxx
[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx
[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx
[ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx
[ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx
[ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx
[ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx
[ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx
[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray.cxx
[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx
[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx
[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx
[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx
[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.cxx
[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformDistanceMap.cxx
[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.cxx
[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx
[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx
[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx
[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Space.cxx
[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx
[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx
[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx
[ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx
[ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx
[ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumePainter.cxx
[ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeClipping.cxx
[ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.cxx
[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx
[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkWarpXform.cxx
[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform.cxx
[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform_Inverse.cxx
[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformList.cxx
[ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformListEntry.cxx
[ 42%] Linking CXX shared library ../../bin/libcmtkBase.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkBase.so -o ../../bin/libcmtkBase.so CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 42%] Built target cmtkBase
make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color=
Scanning dependencies of target cmtkIO
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o
[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o
[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o
[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx
[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx
[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx
[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx
[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileFormat.cxx
[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx
[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx
[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx
[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx
[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
179 | std::auto_ptr<DcmDataset> m_Dataset;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
182 | std::auto_ptr<DiDocument> m_Document;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
164 | this->m_Document = std::auto_ptr<DiDocument>( NULL );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const string&)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
155 | std::auto_ptr<DcmFileFormat> fileformat( new DcmFileFormat );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
164 | this->m_Dataset = std::auto_ptr<DcmDataset>( fileformat->getAndRemoveDataset() );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
170 | this->m_Document = std::auto_ptr<DiDocument>( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkIO.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataTypeTraits.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedArray.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedVector.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataTypeTraits.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedArray.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedVector.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void cmtk::ImageFileDICOM::DoVendorTagsSiemens()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
179 | std::auto_ptr<DcmDataset> m_Dataset;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
182 | std::auto_ptr<DiDocument> m_Document;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
164 | this->m_Document = std::auto_ptr<DiDocument>( NULL );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkListIO.cxx
[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx
[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataTypeTraits.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedArray.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedVector.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
721 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataTypeTraits.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedArray.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFixedVector.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In member function 'std::vector<double> cmtk::ImageStackDICOM::AssembleSliceTimes() const':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
1662 | _M_range_insert(__pos, __first, __last,
| ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx
[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudyList.cxx
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'cmtk::UniformVolume::SmartConstPtr cmtk::ImageStackDICOM::WriteImage(const string&, cmtk::ImageStackDICOM::EmbedInfoEnum) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStream.cxx
[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamInput.cxx
[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx
[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=]
564 | fprintf( File, "%ld ", array[i] );
| ~~^ ~~~~~~~~
| | |
| long int long long int
| %lld
[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFile.cxx
[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx
[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx
[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx
[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function 'static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=]
87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=]
87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=]
87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] );
| ~^
| |
| int
| %lld
[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx
[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function 'static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
58 | fgets( line, 96, fp );
| ~~~~~^~~~~~~~~~~~~~~~
[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx
[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx
[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx
[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx
[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx
[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx
[ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/nifti1_io_math.c
[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx
[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx
[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
137 | std::auto_ptr<DiDocument> m_Document;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/dcmdata/dctagkey.h:27,
from /usr/include/dcmtk/dcmdata/dcdeftag.h:18,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx: In member function 'void cmtk::DICOM::InitFromFile(const string&)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
112 | std::auto_ptr<DcmFileFormat> fileformat( new DcmFileFormat );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/dcmdata/dctagkey.h:27,
from /usr/include/dcmtk/dcmdata/dcdeftag.h:18,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
133 | this->m_Document = std::auto_ptr<DiDocument>( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/dcmdata/dctagkey.h:27,
from /usr/include/dcmtk/dcmdata/dcdeftag.h:18,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
137 | std::auto_ptr<DiDocument> m_Document;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/dcmdata/dctagkey.h:27,
from /usr/include/dcmtk/dcmdata/dcdeftag.h:18,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSQLite.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
137 | std::auto_ptr<DiDocument> m_Document;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/dcmdata/dctagkey.h:27,
from /usr/include/dcmtk/dcmdata/dcdeftag.h:18,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
[ 50%] Linking CXX shared library ../../bin/libcmtkIO.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 50%] Built target cmtkIO
make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color=
Scanning dependencies of target cmtkRegistration
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o
[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o
[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o
[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkCongealingFunctional.cxx
[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx
[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx
[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx
[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx
[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx
[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx
[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx
[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx
[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx
[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx
[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkHausdorffDistance.cxx
[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx
[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx
[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx
[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx:35:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureRMS; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureRMS>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureRMS, std::allocator<cmtk::ImagePairSimilarityMeasureRMS> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureRMS*, std::vector<cmtk::ImagePairSimilarityMeasureRMS, std::allocator<cmtk::ImagePairSimilarityMeasureRMS> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMSD; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMSD>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNCC; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNCC>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >'} changed in GCC 7.1
[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >'} changed in GCC 7.1
[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureCR; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureCR>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx:35:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static cmtk::ImagePairAffineRegistrationFunctional* cmtk::ImagePairAffineRegistrationFunctional::Create(int, cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum, cmtk::AffineXform::SmartPtr&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureRMS*, std::vector<cmtk::ImagePairSimilarityMeasureRMS, std::allocator<cmtk::ImagePairSimilarityMeasureRMS> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx
[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNCC; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNCC>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureRMS; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureRMS>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureRMS, std::allocator<cmtk::ImagePairSimilarityMeasureRMS> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureRMS*, std::vector<cmtk::ImagePairSimilarityMeasureRMS, std::allocator<cmtk::ImagePairSimilarityMeasureRMS> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMSD; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMSD>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >'} changed in GCC 7.1
[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureCR; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureCR>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >'} changed in GCC 7.1
[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx
[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static cmtk::ImagePairNonrigidRegistrationFunctional* cmtk::ImagePairNonrigidRegistrationFunctional::Create(int, cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureRMS*, std::vector<cmtk::ImagePairSimilarityMeasureRMS, std::allocator<cmtk::ImagePairSimilarityMeasureRMS> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx
[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx
[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMSD; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMSD>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairAffineRegistrationFunctionalTemplate<VM>::ImagePairAffineRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::ImagePairSimilarityMeasureMSD]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNCC; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNCC>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairAffineRegistrationFunctionalTemplate<VM>::ImagePairAffineRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::ImagePairSimilarityMeasureNCC]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureCR; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureCR>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairAffineRegistrationFunctionalTemplate<VM>::ImagePairAffineRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::ImagePairSimilarityMeasureCR]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMSD; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMSD>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<cmtk::ImagePairSimilarityMeasureNMI*>; _ForwardIterator = cmtk::ImagePairSimilarityMeasureNMI*; bool _TrivialValueTypes = false]':
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureNMI*>' changed in GCC 7.1
76 | __uninit_copy(_InputIterator __first, _InputIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureNMI*>' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNCC; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNCC>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureNMI*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureNMI*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairAffineRegistrationFunctionalTemplate<VM>::ImagePairAffineRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::ImagePairSimilarityMeasureNMI]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<cmtk::ImagePairSimilarityMeasureMI*>; _ForwardIterator = cmtk::ImagePairSimilarityMeasureMI*; bool _TrivialValueTypes = false]':
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureMI*>' changed in GCC 7.1
76 | __uninit_copy(_InputIterator __first, _InputIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureMI*>' changed in GCC 7.1
[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureNMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureNMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureMI*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::ImagePairSimilarityMeasureMI*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairAffineRegistrationFunctionalTemplate<VM>::ImagePairAffineRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::ImagePairSimilarityMeasureMI]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureMI; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureMI>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::ImagePairSimilarityMeasureCR; _Alloc = std::allocator<cmtk::ImagePairSimilarityMeasureCR>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVector.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairNonrigidRegistrationFunctionalTemplate<VM>::ImagePairNonrigidRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum) [with VM = cmtk::ImagePairSimilarityMeasureMSD]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMSD*, std::vector<cmtk::ImagePairSimilarityMeasureMSD, std::allocator<cmtk::ImagePairSimilarityMeasureMSD> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairNonrigidRegistrationFunctionalTemplate<VM>::ImagePairNonrigidRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum) [with VM = cmtk::ImagePairSimilarityMeasureNCC]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNCC*, std::vector<cmtk::ImagePairSimilarityMeasureNCC, std::allocator<cmtk::ImagePairSimilarityMeasureNCC> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairNonrigidRegistrationFunctionalTemplate<VM>::ImagePairNonrigidRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum) [with VM = cmtk::ImagePairSimilarityMeasureNMI]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureNMI*, std::vector<cmtk::ImagePairSimilarityMeasureNMI, std::allocator<cmtk::ImagePairSimilarityMeasureNMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairNonrigidRegistrationFunctionalTemplate<VM>::ImagePairNonrigidRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum) [with VM = cmtk::ImagePairSimilarityMeasureMI]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureMI*, std::vector<cmtk::ImagePairSimilarityMeasureMI, std::allocator<cmtk::ImagePairSimilarityMeasureMI> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::ImagePairNonrigidRegistrationFunctionalTemplate<VM>::ImagePairNonrigidRegistrationFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::Interpolators::InterpolationEnum) [with VM = cmtk::ImagePairSimilarityMeasureCR]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::ImagePairSimilarityMeasureCR*, std::vector<cmtk::ImagePairSimilarityMeasureCR, std::allocator<cmtk::ImagePairSimilarityMeasureCR> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx
[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx
[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkProtocolCallback.cxx
[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkReformatVolume.cxx
[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationCallback.cxx
[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx
[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx
[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx
[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx
[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetricElasticFunctional.cxx
[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx
[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx
[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx
[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx
[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx
[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx
[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx
[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx
[ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx
[ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx
[ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx
[ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR>; _Alloc = std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR> >]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR> > >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR>*, std::vector<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR> > > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR>; _Alloc = std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR> >]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR> > >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR>*, std::vector<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR> > > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*>; _ForwardIterator = cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*; bool _TrivialValueTypes = false]':
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*>' changed in GCC 7.1
76 | __uninit_copy(_InputIterator __first, _InputIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*>' changed in GCC 7.1
[ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>; _Alloc = std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR> >]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR> > >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*, std::vector<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR> > > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::VoxelMatchingAffineFunctionalTemplate<VM>::VoxelMatchingAffineFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>*, std::vector<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::LINEAR> > > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>; _Alloc = std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> >]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> > >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>*, std::vector<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> > > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>; _Alloc = std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> >]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> > >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>*, std::vector<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> > > >'} changed in GCC 7.1
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*>; _ForwardIterator = cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*; bool _TrivialValueTypes = false]':
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*>' changed in GCC 7.1
76 | __uninit_copy(_InputIterator __first, _InputIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*>' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>; _Alloc = std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR> >]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR> > >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*, std::vector<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR> > > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:66,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_uninitialized.h:134:15: note: parameter passing for argument of type 'std::move_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*>' changed in GCC 7.1
131 | return std::__uninitialized_copy<__is_trivial(_ValueType1)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
132 | && __is_trivial(_ValueType2)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
133 | && __assignable>::
| ~~~~~~~~~~~~~~~~~~
134 | __uninit_copy(__first, __last, __result);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::VoxelMatchingAffineFunctionalTemplate<VM>::VoxelMatchingAffineFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>*, std::vector<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingCorrRatio<cmtk::Interpolators::NEAREST_NEIGHBOR> > > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingMeanSquaredDifference; _Alloc = std::allocator<cmtk::VoxelMatchingMeanSquaredDifference>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingMeanSquaredDifference, std::allocator<cmtk::VoxelMatchingMeanSquaredDifference> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingMeanSquaredDifference*, std::vector<cmtk::VoxelMatchingMeanSquaredDifference, std::allocator<cmtk::VoxelMatchingMeanSquaredDifference> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::VoxelMatchingAffineFunctionalTemplate<VM>::VoxelMatchingAffineFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::VoxelMatchingMeanSquaredDifference]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingMeanSquaredDifference*, std::vector<cmtk::VoxelMatchingMeanSquaredDifference, std::allocator<cmtk::VoxelMatchingMeanSquaredDifference> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = cmtk::VoxelMatchingCrossCorrelation; _Alloc = std::allocator<cmtk::VoxelMatchingCrossCorrelation>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<cmtk::VoxelMatchingCrossCorrelation, std::allocator<cmtk::VoxelMatchingCrossCorrelation> >::iterator' {aka '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingCrossCorrelation*, std::vector<cmtk::VoxelMatchingCrossCorrelation, std::allocator<cmtk::VoxelMatchingCrossCorrelation> > >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx:33:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'cmtk::VoxelMatchingAffineFunctionalTemplate<VM>::VoxelMatchingAffineFunctionalTemplate(cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::AffineXform::SmartPtr&) [with VM = cmtk::VoxelMatchingCrossCorrelation]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingCrossCorrelation*, std::vector<cmtk::VoxelMatchingCrossCorrelation, std::allocator<cmtk::VoxelMatchingCrossCorrelation> > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static cmtk::VoxelMatchingAffineFunctional* cmtk::VoxelMatchingAffineFunctional::Create(int, cmtk::UniformVolume::SmartPtr&, cmtk::UniformVolume::SmartPtr&, cmtk::AffineXform::SmartPtr&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR>*, std::vector<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::LINEAR> > > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR>*, std::vector<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR>, std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::LINEAR> > > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>*, std::vector<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingNormMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> > > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>*, std::vector<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR>, std::allocator<cmtk::VoxelMatchingMutInf<cmtk::Interpolators::NEAREST_NEIGHBOR> > > >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
[ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx
[ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target cmtkRegistration
make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend
make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color=
Scanning dependencies of target cmtkRecon
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o
[ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx
Scanning dependencies of target cmtkSegmentation
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o
[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx
[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx
[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx:33:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'void cmtk::LabelCombinationLocalBinaryShapeBasedAveraging::ComputeResultForRegion(const TargetRegionType&, cmtk::TypedArray&) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX shared library ../../bin/libcmtkRecon.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Built target cmtkRecon
[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx
[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx:33:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'void cmtk::LabelCombinationLocalShapeBasedAveraging::ComputeResultForRegion(cmtk::TypedArray&, std::vector<float>&, int, const TargetRegionType&, std::vector<cmtk::SmartConstPointer<cmtk::UniformVolume> >) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx:33:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx:33:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx
/usr/include/c++/9/bits/stl_algo.h: In member function 'void cmtk::LabelCombinationLocalWeighting::ExcludeGlobalOutliers()':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx
[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx
[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx
[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx
[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx
[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx
[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx
[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx
[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx
[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx:31:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx:31:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMacros.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx:31:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'cmtk::DetectedPhantomMagphanEMR051::SmartPtr cmtk::DetectPhantomMagphanEMR051::GetDetectedPhantom()':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target cmtkSegmentation
make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend
make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend
make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend
make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color=
Scanning dependencies of target detect_adni_phantom
Scanning dependencies of target dcm2image
Scanning dependencies of target detect_spheres_matched_filter
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build
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make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target mcwarp
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build
[ 67%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o
[ 68%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o
[ 68%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
179 | std::auto_ptr<DcmDataset> m_Dataset;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
182 | std::auto_ptr<DiDocument> m_Document;
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
164 | this->m_Document = std::auto_ptr<DiDocument>( NULL );
| ^~~~~~~~
In file included from /usr/include/c++/9/bits/locale_conv.h:41,
from /usr/include/c++/9/locale:43,
from /usr/include/c++/9/iomanip:43,
from /usr/include/dcmtk/ofstd/ofstream.h:35,
from /usr/include/dcmtk/ofstd/ofstring.h:59,
from /usr/include/dcmtk/oflog/tstring.h:33,
from /usr/include/dcmtk/oflog/loglevel.h:36,
from /usr/include/dcmtk/oflog/logger.h:34,
from /usr/include/dcmtk/oflog/oflog.h:28,
from /usr/include/dcmtk/dcmdata/dctypes.h:27,
from /usr/include/dcmtk/dcmdata/dctk.h:28,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
[ 68%] Linking CXX executable ../bin/detect_spheres_matched_filter
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target detect_spheres_matched_filter
make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color=
Scanning dependencies of target mcaffine
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 68%] Linking CXX executable ../bin/detect_adni_phantom
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target detect_adni_phantom
make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color=
Scanning dependencies of target asegment_sri24
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 68%] Linking CXX executable ../bin/dcm2image
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target dcm2image
make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color=
Scanning dependencies of target xform2scalar
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 68%] Linking CXX executable ../bin/asegment_sri24
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target asegment_sri24
make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color=
Scanning dependencies of target warp2ps
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/xform2scalar
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target xform2scalar
make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color=
Scanning dependencies of target vtkxform
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx: In function 'int doMain(int, const char**)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::<anonymous>.cmtk::FixedArray<3, double>::operator[](0)' from 'double' to 'float' [-Wnarrowing]
190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] };
| ^
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::<anonymous>.cmtk::FixedArray<3, double>::operator[](1)' from 'double' to 'float' [-Wnarrowing]
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::<anonymous>.cmtk::FixedArray<3, double>::operator[](2)' from 'double' to 'float' [-Wnarrowing]
[ 69%] Linking CXX executable ../bin/mcaffine
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target mcaffine
make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color=
Scanning dependencies of target vol2csv
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx
[ 69%] Linking CXX executable ../bin/warp2ps
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target warp2ps
make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color=
Scanning dependencies of target ttest
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/ttest.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 70%] Linking CXX executable ../bin/vtkxform
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target vtkxform
make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/warp.dir/DependInfo.cmake --color=
Scanning dependencies of target warp
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp.dir/warp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warp.cxx
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
509 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35:
/usr/include/c++/9/bits/stl_vector.h: In function 'int doMain(int, const char**)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
957 | _M_fill_insert(end(), __new_size - size(), __x);
| ^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warp.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 70%] Linking CXX executable ../bin/mcwarp
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 71%] Linking CXX executable ../bin/warp
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target mcwarp
make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target warp
make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color=
Scanning dependencies of target unwarp_image_phantom
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx
Scanning dependencies of target unsplit
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 71%] Linking CXX executable ../bin/vol2csv
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target vol2csv
make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color=
Scanning dependencies of target sympl
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sympl.cxx
[ 71%] Linking CXX executable ../bin/ttest
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target ttest
make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color=
Scanning dependencies of target stream_pixels
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 71%] Linking CXX executable ../bin/unsplit
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target unsplit
make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color=
Scanning dependencies of target xform2itk
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 72%] Linking CXX executable ../bin/unwarp_image_phantom
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Built target unwarp_image_phantom
make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color=
Scanning dependencies of target statistics
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/statistics.dir/statistics.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/statistics.cxx
[ 73%] Linking CXX executable ../bin/stream_pixels
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target stream_pixels
make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/split.dir/DependInfo.cmake --color=
Scanning dependencies of target split
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/split.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/statistics.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/split.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 73%] Linking CXX executable ../bin/xform2itk
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target xform2itk
make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color=
Scanning dependencies of target sequence
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sequence.dir/sequence.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx
[ 73%] Linking CXX executable ../bin/sympl
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target sympl
make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color=
Scanning dependencies of target sbai
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sbai.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 73%] Linking CXX executable ../bin/statistics
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:51,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:51,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkSmartPtr.h:42,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:51,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../bin/split
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target statistics
make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sba.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/stl_algo.h: In function 'int doMain(int, const char**)':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target sba
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target split
make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color=
[ 74%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sba.dir/sba.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sba.cxx
Scanning dependencies of target registrationx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 75%] Linking CXX executable ../bin/registrationx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target registrationx
make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/registration.dir/DependInfo.cmake --color=
Scanning dependencies of target registration
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/registration.cxx
[ 76%] Linking CXX executable ../bin/sequence
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target sequence
make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color=
Scanning dependencies of target pxsearch
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/registration.cxx:40:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 76%] Linking CXX executable ../bin/sbai
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 76%] Linking CXX executable ../bin/registration
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target sbai
make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target registration
make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color=
Scanning dependencies of target fit_affine_xform_landmarks
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target similarity
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o
make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/similarity.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 77%] Linking CXX executable ../bin/sba
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target sba
make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color=
Scanning dependencies of target mrbias
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 77%] Linking CXX executable ../bin/fit_affine_xform_landmarks
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target fit_affine_xform_landmarks
make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color=
Scanning dependencies of target fit_affine_xform
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx
[ 77%] Linking CXX executable ../bin/pxsearch
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target pxsearch
make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color=
Scanning dependencies of target jidb
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/jidb.dir/jidb.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/jidb.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 77%] Linking CXX executable ../bin/similarity
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target similarity
make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/film.dir/DependInfo.cmake --color=
Scanning dependencies of target film
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/film.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/film.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 77%] Linking CXX executable ../bin/fit_affine_xform
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target fit_affine_xform
make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color=
Scanning dependencies of target warpx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warpx.dir/warpx.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warpx.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 77%] Linking CXX executable ../bin/mrbias
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Linking CXX executable ../bin/warpx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1
[ 77%] Built target mrbias
make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color=
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
Scanning dependencies of target reformatx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Built target warpx
make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color=
Scanning dependencies of target fibxform
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 79%] Linking CXX executable ../bin/jidb
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target jidb
make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color=
Scanning dependencies of target fit_affine_dfield
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 79%] Linking CXX executable ../bin/fibxform
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target fibxform
make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color=
Scanning dependencies of target xform2dfield
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 80%] Linking CXX executable ../bin/fit_affine_dfield
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target fit_affine_dfield
make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color=
Scanning dependencies of target dwi_mask_bad_slices
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx
[ 80%] Linking CXX executable ../bin/film
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target film
make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color=
Scanning dependencies of target convert_warp
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35:
/usr/include/c++/9/bits/stl_vector.h: In function 'int doMain(int, const char**)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 80%] Linking CXX executable ../bin/xform2dfield
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target xform2dfield
make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color=
Scanning dependencies of target groupwise_affine
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx
[ 80%] Linking CXX executable ../bin/convert_warp
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target convert_warp
make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color=
Scanning dependencies of target epiunwarp
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 80%] Linking CXX executable ../bin/reformatx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target reformatx
make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color=
Scanning dependencies of target average_labels
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 81%] Linking CXX executable ../bin/dwi_mask_bad_slices
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target dwi_mask_bad_slices
make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color=
Scanning dependencies of target average_affine
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 83%] Linking CXX executable ../bin/average_labels
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Built target average_labels
make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/filter.dir/DependInfo.cmake --color=
Scanning dependencies of target filter
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/filter.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 83%] Linking CXX executable ../bin/epiunwarp
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 83%] Linking CXX executable ../bin/average_affine
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Built target epiunwarp
make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color=
Scanning dependencies of target fit_spline_dfield
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Built target average_affine
make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/glm.dir/DependInfo.cmake --color=
Scanning dependencies of target glm
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/glm.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../bin/groupwise_affine
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Built target groupwise_affine
make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/probe.dir/DependInfo.cmake --color=
Scanning dependencies of target probe
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:46,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37:
/usr/include/c++/9/bits/stl_vector.h: In function 'void Import(const char*, const char*, cmtk::UniformVolume::SmartPtr&, std::vector<cmtk::SmartPointer<cmtk::TypedArray> >&, size_t&, cmtk::Types::DataItem*&, size_t&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 83%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/probe.cxx
[ 84%] Linking CXX executable ../bin/filter
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target filter
make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color=
Scanning dependencies of target hausdorff
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 84%] Linking CXX executable ../bin/fit_spline_dfield
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target fit_spline_dfield
make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color=
Scanning dependencies of target volume_injection
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 85%] Linking CXX executable ../bin/hausdorff
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target hausdorff
make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color=
[ 85%] Linking CXX executable ../bin/glm
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1
Scanning dependencies of target fib2image
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 85%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target glm
make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color=
Scanning dependencies of target groupwise_warp
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx:39:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 85%] Linking CXX executable ../bin/probe
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target probe
make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color=
Scanning dependencies of target avg_adm
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx
[ 85%] Linking CXX executable ../bin/fib2image
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target fib2image
make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color=
Scanning dependencies of target asegment
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/asegment.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 85%] Linking CXX executable ../bin/volume_injection
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target volume_injection
make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color=
Scanning dependencies of target dof2mat
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 85%] Linking CXX executable ../bin/asegment
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target asegment
make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color=
Scanning dependencies of target convertx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/convertx.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/convertx.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 85%] Linking CXX executable ../bin/dof2mat
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target dof2mat
make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color=
Scanning dependencies of target dbtool
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 86%] Linking CXX executable ../bin/groupwise_warp
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target groupwise_warp
make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color=
Scanning dependencies of target lsba
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/lsba.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/lsba.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 86%] Linking CXX executable ../bin/avg_adm
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target avg_adm
make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/regress.dir/DependInfo.cmake --color=
Scanning dependencies of target regress
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/regress.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 86%] Linking CXX executable ../bin/dbtool
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target dbtool
make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color=
Scanning dependencies of target average_images
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/average_images.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 86%] Linking CXX executable ../bin/lsba
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target lsba
make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color=
Scanning dependencies of target destripe
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/destripe.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 86%] Linking CXX executable ../bin/regress
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target regress
make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color=
Scanning dependencies of target groupwise_init
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 87%] Linking CXX executable ../bin/average_images
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target average_images
make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color=
Scanning dependencies of target interleaved_bad_slices
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 88%] Linking CXX executable ../bin/convertx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target convertx
make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color=
Scanning dependencies of target reorient
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Linking CXX executable ../bin/destripe
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1
[ 88%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reorient.dir/reorient.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/reorient.cxx
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target destripe
make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color=
Scanning dependencies of target concat_affine
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 88%] Linking CXX executable ../bin/groupwise_init
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target groupwise_init
make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color=
Scanning dependencies of target streamxform
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 88%] Linking CXX executable ../bin/reorient
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target reorient
make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color=
Scanning dependencies of target fit_spline_xform
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx
[ 89%] Linking CXX executable ../bin/concat_affine
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Built target concat_affine
make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color=
Scanning dependencies of target geomatch
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 90%] Linking CXX executable ../bin/interleaved_bad_slices
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 90%] Built target interleaved_bad_slices
make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color=
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
Scanning dependencies of target lvote
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/lvote.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 92%] Linking CXX executable ../bin/streamxform
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 92%] Linking CXX executable ../bin/geomatch
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target streamxform
make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color=
Scanning dependencies of target symplx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/symplx.cxx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target geomatch
make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color=
Scanning dependencies of target gmm
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gmm.dir/gmm.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/gmm.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/gmm.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 92%] Linking CXX executable ../bin/fit_spline_xform
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 92%] Linking CXX executable ../bin/symplx
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target fit_spline_xform
make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color=
Scanning dependencies of target make_initial_affine
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target symplx
make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color=
Scanning dependencies of target mk_nifti_hdr
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx
[ 92%] Linking CXX executable ../bin/lvote
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target lvote
make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color=
Scanning dependencies of target gregxform
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
191 | fgets( line, 80, infile );
| ~~~~~^~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/gmm
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target gmm
make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color=
Scanning dependencies of target histogram
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/histogram.dir/histogram.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/histogram.cxx
[ 94%] Linking CXX executable ../bin/mk_nifti_hdr
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 94%] Linking CXX executable ../bin/make_initial_affine
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target mk_nifti_hdr
make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color=
Scanning dependencies of target lmsba
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target make_initial_affine
make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color=
Scanning dependencies of target imagemath
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 94%] Linking CXX executable ../bin/gregxform
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target gregxform
make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color=
Scanning dependencies of target mat2dof
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 94%] Linking CXX executable ../bin/lmsba
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target lmsba
make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color=
Scanning dependencies of target levelset
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/levelset.cxx
[ 95%] Linking CXX executable ../bin/mat2dof
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
[ 95%] Linking CXX executable ../bin/histogram
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 95%] Built target mat2dof
make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/describe.dir/DependInfo.cmake --color=
Scanning dependencies of target describe
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 95%] Built target histogram
make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color=
[ 95%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx
Scanning dependencies of target mk_analyze_hdr
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx: In function 'void DescribeImage(const char*)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=]
88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:40: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=]
88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:50: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=]
88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:24: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=]
124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:29: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=]
124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] );
| ~^
| |
| int
| %lld
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:34: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=]
124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] );
| ~^
| |
| int
| %lld
[ 96%] Linking CXX executable ../bin/levelset
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target levelset
make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color=
Scanning dependencies of target mk_adni_phantom
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[ 98%] Linking CXX executable ../bin/describe
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target describe
make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color=
Scanning dependencies of target mk_phantom_3d
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx
[ 98%] Linking CXX executable ../bin/mk_analyze_hdr
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target mk_analyze_hdr
make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color=
Scanning dependencies of target volume_reconstruction
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Linking CXX executable ../bin/mk_adni_phantom
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1
[ 99%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Built target mk_adni_phantom
make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color=
Scanning dependencies of target overlap
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Linking CXX executable ../bin/imagemath
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1
[100%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/overlap.cxx
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target imagemath
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx:35:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx: In function 'int doMain(int, const char**)':
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:192:7: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
192 | std::auto_ptr<DcmFileFormat> fileformat( new DcmFileFormat );
| ^~~~~~~~
In file included from /usr/include/c++/9/memory:80,
from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:46:
/usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here
53 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps/overlap.cxx:36:
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception );
| ^~~~~
[100%] Linking CXX executable ../bin/overlap
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target overlap
[100%] Linking CXX executable ../bin/mk_phantom_3d
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target mk_phantom_3d
[100%] Linking CXX executable ../bin/volume_reconstruction
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf -Wl,-rpath,/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf:/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target volume_reconstruction
make[2]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
rm -f debian/cmtk.debhelper.log
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
ARGS=--verbose xvfb-run --auto-servernum --server-num=20 \
dh_auto_test
cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j4
Test project /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf
No tests were found!!!
make[2]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh: warning: invalid flag in DEB_BUILD_OPTIONS: "
dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck"
dh_testroot -a
dh_prep -a
rm -f -- debian/cmtk.substvars
rm -fr -- debian/.debhelper/generated/cmtk/ debian/cmtk/ debian/tmp/
dh_installdirs -a
install -d debian/cmtk/etc/cmtk
rm -f debian/cmtk.debhelper.log
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_auto_install
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<BUILDDIR>>/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg -B/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend
make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend
make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/mxml /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Numerics /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Utilities/mxml/CMakeFiles/cmtkMxml.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/Numerics/CMakeFiles/cmtkNumerics.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 2%] Built target cmtkMxml
make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/System /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color=
[ 8%] Built target cmtkNumerics
[ 16%] Built target NrrdIO
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/System/CMakeFiles/cmtkSystem.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Built target cmtkSystem
make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Base /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/Base/CMakeFiles/cmtkBase.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 42%] Built target cmtkBase
make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/IO /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/IO/CMakeFiles/cmtkIO.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 50%] Built target cmtkIO
make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Registration /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/Registration/CMakeFiles/cmtkRegistration.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target cmtkRegistration
make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend
make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Recon /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/libs/Segmentation /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/Recon/CMakeFiles/cmtkRecon.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build
[ 63%] Built target cmtkRecon
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target cmtkSegmentation
make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend
make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend
make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend
make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build
make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build
make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/dcm2image.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/detect_spheres_matched_filter.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target detect_adni_phantom
[ 68%] Built target dcm2image
[ 68%] Built target detect_spheres_matched_filter
make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend
make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend
make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend
[ 68%] Built target mcwarp
make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build
make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/asegment_sri24.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target asegment_sri24
[ 68%] Built target warp2ps
[ 69%] Built target xform2scalar
make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend
make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend
make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend
[ 69%] Built target mcaffine
make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/warp.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build
make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/vtkxform.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/ttest.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/warp.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target vol2csv
[ 70%] Built target vtkxform
[ 70%] Built target ttest
[ 71%] Built target warp
make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend
make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend
make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend
make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color=
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build
make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build
make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/stream_pixels.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/unwarp_image_phantom.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target stream_pixels
[ 71%] Built target unsplit
[ 72%] Built target unwarp_image_phantom
[ 72%] Built target sympl
make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend
make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend
make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend
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make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/split.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build
make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/statistics.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target sequence
make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend
[ 73%] Built target split
[ 73%] Built target xform2itk
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color=
[ 74%] Built target statistics
make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend
make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend
make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/sba.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/registration.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/sbai.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target sbai
[ 75%] Built target sba
[ 76%] Built target registrationx
make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend
make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend
make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend
[ 76%] Built target registration
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target pxsearch
[ 77%] Built target fit_affine_xform_landmarks
[ 77%] Built target similarity
make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend
make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend
make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/film.dir/DependInfo.cmake --color=
[ 77%] Built target mrbias
make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build
make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target fit_affine_xform
[ 77%] Built target jidb
[ 77%] Built target film
make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend
make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend
make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color=
[ 77%] Built target warpx
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build
make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target fit_affine_dfield
[ 78%] Built target fibxform
make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend
[ 79%] Built target reformatx
make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend
make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend
[ 80%] Built target xform2dfield
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build
make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target dwi_mask_bad_slices
make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend
[ 81%] Built target convert_warp
[ 81%] Built target groupwise_affine
make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend
make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/filter.dir/DependInfo.cmake --color=
[ 81%] Built target epiunwarp
make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build
make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/average_labels.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/average_affine.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_dfield.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Built target average_labels
make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend
[ 83%] Built target average_affine
[ 84%] Built target filter
make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/glm.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/probe.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color=
[ 84%] Built target fit_spline_dfield
make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/glm.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target glm
make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend
[ 84%] Built target probe
make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color=
[ 84%] Built target volume_injection
make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend
[ 85%] Built target hausdorff
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target fib2image
make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend
[ 85%] Built target groupwise_warp
[ 85%] Built target asegment
make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color=
[ 85%] Built target avg_adm
make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/dbtool.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target dbtool
make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend
[ 86%] Built target dof2mat
make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/regress.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color=
[ 86%] Built target convertx
make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color=
[ 86%] Built target lsba
make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build
make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/regress.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build
[ 86%] Built target average_images
[ 86%] Built target regress
make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend
make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color=
[ 86%] Built target destripe
make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build
[ 87%] Built target groupwise_init
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build
make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/interleaved_bad_slices.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/reorient.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target interleaved_bad_slices
make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build
[ 89%] Built target concat_affine
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend
[ 89%] Built target reorient
make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build
[ 90%] Built target streamxform
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build
make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/lvote.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build
[ 91%] Built target fit_spline_xform
[ 91%] Built target lvote
make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend
make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend
[ 92%] Built target geomatch
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color=
make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build
make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build
[ 92%] Built target symplx
make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/make_initial_affine.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mk_nifti_hdr.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target make_initial_affine
[ 93%] Built target gmm
make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend
make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color=
[ 94%] Built target mk_nifti_hdr
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build
make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build
make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build
[ 94%] Built target gregxform
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/imagemath.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target histogram
[ 94%] Built target lmsba
make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend
make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/describe.dir/DependInfo.cmake --color=
[ 94%] Built target imagemath
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build
make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build
[ 95%] Built target mat2dof
make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target describe
make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend
[ 97%] Built target levelset
make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color=
[ 97%] Built target mk_analyze_hdr
make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build
[ 98%] Built target mk_adni_phantom
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/volume_reconstruction.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'.
make[4]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target mk_phantom_3d
[ 99%] Built target volume_reconstruction
[100%] Built target overlap
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKLibraryDepends.cmake
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libNrrdIO.so
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/NrrdIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_NrrdIO_mangle.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateAir.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateBiff.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateNrrd.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teem32bit.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemDio.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemEndian.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemPng.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemQnanhibit.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkMxml.so
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_mxml_mangle.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml-private.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/config.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCannotBeCopied.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineTypeTraits.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCompressedStream.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkConsole.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCoverity.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkDebugOutput.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkException.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkExitException.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFFTW.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFileUtils.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkLockingPtr.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMemory.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMountPoints.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMutexLock.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgress.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgressConsole.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkRegressionTracker.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterGCD.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterMutex.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartConstPtr.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartPtr.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStackBacktrace.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStrUtility.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTestFunctionMap.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameters.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPool.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphore.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSystemTypes.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreads.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTimers.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/doxygen.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineConvert.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineItem.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineList.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineOption.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineVector.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreAppleIsRetarded.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreNone.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphorePOSIX.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreWindows.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ap.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/apvt.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bdsvd.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bidiagonal.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/blas.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/cholesky.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/det.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/gammaf.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hessenberg.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hsschur.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ibetaf.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/igammaf.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lbfgsb.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lq.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lu.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/normaldistr.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/nsevd.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/qr.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/randomc.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/reflections.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/rotations.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sblas.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sevd.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/spddet.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studenttdistr.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studentttests.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/svd.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tdevd.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tridiagonal.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveDeformationModel.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveShapeModel.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXformUniformVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientationBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkBitVector.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCompatibilityMatrix4x4.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicInterpolator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicSpline.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridLocalCorrelation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridMorphologicalOperators.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataTypeTraits.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDeformationField.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDetectedPhantomMagphanEMR051.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDirectionSet.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDistanceMap.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterMask.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToLandmarks.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToWarpXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToXformList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitPolynomialToLandmarks.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitRigidToLandmarks.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToDeformationField.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToLandmarks.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToXformList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitToXformListBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedArray.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedVector.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGaussianKernel.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGeneralLinearModel.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHashMapSTL.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHypothesisTests.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationBoundaryMap.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConnectedComponents.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConvertType.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropRegion.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropThreshold.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDistanceMap.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDownsample.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilateDistance.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationFlip.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationGaussFilter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationHistogramEqualization.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationLaplaceFilter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationMapValues.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationOtsuThreshold.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationPruneHistogram.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRegionFilter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationReplace.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationResampleIsotropic.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRevert.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationScaleToRange.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetDataClass.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetPadding.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationThreshold.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkInterpolator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogram.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogramBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmark.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPair.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPairList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLeastSquares.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLinearInterpolator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLogHistogram.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMacros.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMagphanEMR051.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathFunctionWrappers.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix3x3.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix4x4.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMetaInformationObject.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkNearestNeighborInterpolator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkParametricPlane.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomial.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomialXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkProbeInfo.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionIndexIterator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionSphereIterator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImage.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImageGradientField.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSegmentationLabel.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSincInterpolator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXformUniformVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSurfaceNormal.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSymmetricMatrix.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeFromSpaceAffine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeToSpaceAffine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformedVolumeAxes.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArray.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunction.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramEqualization.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramMatching.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypes.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformDistanceMap.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeGaussianFilter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeHoughTransformSphere.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorPartialVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeLaplaceFilter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeMorphologicalOperators.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumePainter.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnionFind.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnits.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector3D.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeClipping.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeGridToGridLookup.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkWarpXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformListEntry.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformUniformVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/doxygen.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil_Statistics.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray_Statistics.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAffineXformITKIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAnalyze.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamAffineXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamInput.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamOutput.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamPolynomialXform.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamStudyList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkDICOM.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileConstHeader.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileFormat.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileHeader.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkGroupwiseRegistrationFunctionalIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageFileDICOM.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationApplyMask.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationMatchIntensities.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageStackDICOM.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkListIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkPhantomIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSQLite.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSegmentationLabelIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSiemensCSAHeader.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSplineWarpXformITKIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudy.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyImageSet.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyList.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStream.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamInput.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamOutput.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamStudylist.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromFile.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromSlices.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromStudy.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformListIO.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/doxygen.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1_io_math.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineCongealingFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineGroupwiseRegistrationRMIFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistrationCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestDirectionOptimizer.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestNeighbourOptimizer.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkCongealingFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkEchoPlanarUnwarpFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistrationCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationOutput.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationRMIFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkHausdorffDistance.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityJointHistogram.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasure.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureCR.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMI.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMSD.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNCC.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNMI.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureRMS.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctionalTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctionalTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLineBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctionalBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageXformDB.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMakeInitialAffineTransformation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctionalBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizer.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizerBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkProtocolCallback.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationCallback.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationJointHistogram.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkScaleHistogramValueTrait.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSearchTrace.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetricElasticFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetryPlaneFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTemplateMultiChannelRegistrationFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarity.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarityMemory.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctionalTemplate.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCorrRatio.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCrossCorrelation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingElasticFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMeanSquaredDifference.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric_Type.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMutInf.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingNormMutInf.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelRegistration.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/doxygen.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctionalMetricData.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctionalMetricData.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeJacobian.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumePlain.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeReformat.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctionalThreadFunctions.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkAtlasSegmentation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkDetectPhantomMagphanEMR051.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalVoting.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalWeighting.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationSTAPLE.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveraging.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationVoting.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkMultiChannelEntropyMinimizationIntensityCorrectionFunctional.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkOverlapMeasures.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelset.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLine.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLineBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/doxygen.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so
-- Set runtime path of "/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so" to "/usr/lib/cmtk"
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionBox.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionGaussian.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkVolumeInjectionReconstruction.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/doxygen.h
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.txx
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking.sh
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking_procmail.sh
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion
-- Installing: /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/bin/cmtk
make[2]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/obj-arm-linux-gnueabihf'
: # Remove not needed headers, cmake files etc
rm -fr /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include
/usr/bin/find /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk -iname *.cmake -delete
/usr/bin/find: paths must precede expression: `cmtkConfigureCPack.cmake'
/usr/bin/find: possible unquoted pattern after predicate `-iname'?
make[1]: [debian/rules:72: override_dh_auto_install] Error 1 (ignored)
: # Prune duplicate docs
rm -fr /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc
: # Generate manpages
xvfb-run --auto-servernum --server-num=20 \
scripts/gen_manpages \
|| dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: Can't open /usr/lib/cmtk/bin/cmtk_locking.sh
Manpage for /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh
Manpage for /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh
Manpage for /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh
Manpage for /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh
Manpage for /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory
Manpage for /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
: # Above condition just to ignore unclean exit from xvfb on elderly broken ubuntus
: # Cleaner solution patches are welcome!
make[1]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_install -a
cp --reflink=auto -a ./debian/cmtk.sh debian/cmtk/etc/cmtk/
install -d debian/.debhelper/generated/cmtk
dh_installdocs -a
install -d debian/cmtk/usr/share/doc/cmtk
cp --reflink=auto -a ./README.txt debian/cmtk/usr/share/doc/cmtk
cd './debian/upstream/..' && find 'upstream' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<<BUILDDIR>>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/doc/cmtk
chown -R 0:0 debian/cmtk/usr/share/doc
chmod -R u\+rw,go=rX debian/cmtk/usr/share/doc
install -p -m0644 debian/README.Debian debian/cmtk/usr/share/doc/cmtk/README.Debian
install -p -m0644 debian/TODO debian/cmtk/usr/share/doc/cmtk/TODO.Debian
install -p -m0644 debian/copyright debian/cmtk/usr/share/doc/cmtk/copyright
dh_installchangelogs -a
install -p -m0644 debian/changelog debian/cmtk/usr/share/doc/cmtk/changelog.Debian
install -p -m0644 ./CHANGELOG debian/cmtk/usr/share/doc/cmtk/changelog
rm -f debian/cmtk.debhelper.log
debian/rules override_dh_installman
make[1]: Entering directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_installman debian/manpages/*
install -d debian/cmtk/usr/share/man/man1/
install -p -m0644 debian/manpages/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment.1
install -p -m0644 debian/manpages/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1
install -p -m0644 debian/manpages/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1
install -p -m0644 debian/manpages/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1
install -p -m0644 debian/manpages/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1
install -p -m0644 debian/manpages/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1
install -p -m0644 debian/manpages/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1
install -p -m0644 debian/manpages/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1
install -p -m0644 debian/manpages/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1
install -p -m0644 debian/manpages/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1
install -p -m0644 debian/manpages/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1
install -p -m0644 debian/manpages/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1
install -p -m0644 debian/manpages/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1
install -p -m0644 debian/manpages/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1
install -p -m0644 debian/manpages/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1
install -p -m0644 debian/manpages/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1
install -p -m0644 debian/manpages/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1
install -p -m0644 debian/manpages/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1
install -p -m0644 debian/manpages/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1
install -p -m0644 debian/manpages/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1
install -p -m0644 debian/manpages/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-film.1
install -p -m0644 debian/manpages/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1
install -p -m0644 debian/manpages/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1
install -p -m0644 debian/manpages/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1
install -p -m0644 debian/manpages/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1
install -p -m0644 debian/manpages/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1
install -p -m0644 debian/manpages/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1
install -p -m0644 debian/manpages/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1
install -p -m0644 debian/manpages/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1
install -p -m0644 debian/manpages/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1
install -p -m0644 debian/manpages/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1
install -p -m0644 debian/manpages/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1
install -p -m0644 debian/manpages/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1
install -p -m0644 debian/manpages/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1
install -p -m0644 debian/manpages/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1
install -p -m0644 debian/manpages/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1
install -p -m0644 debian/manpages/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1
install -p -m0644 debian/manpages/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1
install -p -m0644 debian/manpages/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1
install -p -m0644 debian/manpages/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1
install -p -m0644 debian/manpages/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1
install -p -m0644 debian/manpages/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1
install -p -m0644 debian/manpages/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1
install -p -m0644 debian/manpages/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1
install -p -m0644 debian/manpages/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1
install -p -m0644 debian/manpages/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1
install -p -m0644 debian/manpages/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1
install -p -m0644 debian/manpages/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1
install -p -m0644 debian/manpages/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1
install -p -m0644 debian/manpages/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1
install -p -m0644 debian/manpages/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1
install -p -m0644 debian/manpages/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1
install -p -m0644 debian/manpages/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1
install -p -m0644 debian/manpages/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1
install -p -m0644 debian/manpages/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1
install -p -m0644 debian/manpages/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1
install -p -m0644 debian/manpages/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1
install -p -m0644 debian/manpages/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1
install -p -m0644 debian/manpages/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1
install -p -m0644 debian/manpages/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1
install -p -m0644 debian/manpages/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1
install -p -m0644 debian/manpages/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1
install -p -m0644 debian/manpages/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1
install -p -m0644 debian/manpages/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1
install -p -m0644 debian/manpages/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1
install -p -m0644 debian/manpages/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-split.1
install -p -m0644 debian/manpages/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1
install -p -m0644 debian/manpages/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1
install -p -m0644 debian/manpages/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1
install -p -m0644 debian/manpages/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1
install -p -m0644 debian/manpages/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1
install -p -m0644 debian/manpages/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1
install -p -m0644 debian/manpages/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1
install -p -m0644 debian/manpages/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1
install -p -m0644 debian/manpages/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1
install -p -m0644 debian/manpages/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1
install -p -m0644 debian/manpages/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1
install -p -m0644 debian/manpages/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1
install -p -m0644 debian/manpages/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1
install -p -m0644 debian/manpages/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1
install -p -m0644 debian/manpages/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1
install -p -m0644 debian/manpages/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1
install -p -m0644 debian/manpages/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1
install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1
install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1
man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1
man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1
man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1
man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1
mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1
mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1
mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1
mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1
mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1
mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1
mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1
mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1
mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1
mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1
mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1
mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1
mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1
mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1
mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1
mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1
mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1
mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1
mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1
chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1
mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1
mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1
mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1
mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1
mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1
mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1
mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1
mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1
mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1
mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1
mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1
mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1
mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1
mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1
mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1
mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1
mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1
mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1
mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1
mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1
mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1
mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1
chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1
mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1
mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1
mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1
mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1
mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1
mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1
mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1
mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1
mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1
mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1
mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1
mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1
mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1
mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1
mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1
mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1
mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1
mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1
mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1
mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1
mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1
mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1
chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1
mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1
mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1
mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1
mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1
mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1
mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1
mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1
mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1
mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1
mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1
mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1
mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1
mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1
mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1
mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1
mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1
mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1
mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1
mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1
mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1
mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1
mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1
chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1
make[1]: Leaving directory '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
cd debian/cmtk
chmod a-x usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1
gzip -9nf usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1
cd '/<<BUILDDIR>>/cmtk-3.3.1p1+dfsg'
dh_fixperms -a
find debian/cmtk -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/cmtk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/cmtk/usr/share/doc -type f -a -true -a ! -regex 'debian/cmtk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/cmtk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/cmtk/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/cmtk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/cmtk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/cmtk/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a
dh_dwz -a
install -d debian/cmtk/usr/lib/debug/.dwz/arm-linux-gnueabihf
dwz -mdebian/cmtk/usr/lib/debug/.dwz/arm-linux-gnueabihf/cmtk.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/cmtk.debug -- debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so
dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 168939 new size 171802
objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/arm-linux-gnueabihf/cmtk.debug
dh_strip -a
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/a4e65610189b6e5cd05b065a7f710aace07861.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/a4e65610189b6e5cd05b065a7f710aace07861.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/a4e65610189b6e5cd05b065a7f710aace07861.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/a4e65610189b6e5cd05b065a7f710aace07861.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/fa67be27e0410db36d702be3d7d77951640bb0.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/fa67be27e0410db36d702be3d7d77951640bb0.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/fa67be27e0410db36d702be3d7d77951640bb0.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/fa67be27e0410db36d702be3d7d77951640bb0.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/b508948e6b093144e3ee4158afb0675f774597.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/b508948e6b093144e3ee4158afb0675f774597.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/b508948e6b093144e3ee4158afb0675f774597.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/b508948e6b093144e3ee4158afb0675f774597.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c0
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c0/6559999fa9a9576eeeef65e13bf7f738503e5e.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c0/6559999fa9a9576eeeef65e13bf7f738503e5e.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c0/6559999fa9a9576eeeef65e13bf7f738503e5e.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c0/6559999fa9a9576eeeef65e13bf7f738503e5e.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/09ed805638b5b1c7422b68b6100a057f9012c5.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/09ed805638b5b1c7422b68b6100a057f9012c5.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/09ed805638b5b1c7422b68b6100a057f9012c5.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/09ed805638b5b1c7422b68b6100a057f9012c5.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ef68e4c223e4b8ca8c30269f10694b433681ae.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ef68e4c223e4b8ca8c30269f10694b433681ae.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ef68e4c223e4b8ca8c30269f10694b433681ae.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ef68e4c223e4b8ca8c30269f10694b433681ae.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/0e83ea56f302d0e2857e5643530adf0727d188.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/0e83ea56f302d0e2857e5643530adf0727d188.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/0e83ea56f302d0e2857e5643530adf0727d188.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/0e83ea56f302d0e2857e5643530adf0727d188.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/92533d395a138fefdf1ff660d057849c3c18fc.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/92533d395a138fefdf1ff660d057849c3c18fc.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/92533d395a138fefdf1ff660d057849c3c18fc.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/92533d395a138fefdf1ff660d057849c3c18fc.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/cf980ad7d8dd76ee46a55dbac8325504c1c0af.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/cf980ad7d8dd76ee46a55dbac8325504c1c0af.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/cf980ad7d8dd76ee46a55dbac8325504c1c0af.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/cf980ad7d8dd76ee46a55dbac8325504c1c0af.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/abacbb21f9ed11298a969de84c961fbfe73bf6.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/abacbb21f9ed11298a969de84c961fbfe73bf6.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/abacbb21f9ed11298a969de84c961fbfe73bf6.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/abacbb21f9ed11298a969de84c961fbfe73bf6.debug debian/cmtk/usr/lib/cmtk/bin/asegment
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/e08dd94578f9c83668a810cf2b6569f0e63648.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/e08dd94578f9c83668a810cf2b6569f0e63648.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/e08dd94578f9c83668a810cf2b6569f0e63648.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/e08dd94578f9c83668a810cf2b6569f0e63648.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/fcc1cd7ea65e9fd7d1b74b6a1750c448e0e333.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/fcc1cd7ea65e9fd7d1b74b6a1750c448e0e333.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/fcc1cd7ea65e9fd7d1b74b6a1750c448e0e333.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/fcc1cd7ea65e9fd7d1b74b6a1750c448e0e333.debug debian/cmtk/usr/lib/cmtk/bin/average_affine
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/e6b521146997468154a443c7ac3d4e9f7507b8.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/e6b521146997468154a443c7ac3d4e9f7507b8.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/e6b521146997468154a443c7ac3d4e9f7507b8.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/e6b521146997468154a443c7ac3d4e9f7507b8.debug debian/cmtk/usr/lib/cmtk/bin/average_images
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_labels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/fe7d37d09c4893f480b5314f0f306b275cd861.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/fe7d37d09c4893f480b5314f0f306b275cd861.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/fe7d37d09c4893f480b5314f0f306b275cd861.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_labels
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/fe7d37d09c4893f480b5314f0f306b275cd861.debug debian/cmtk/usr/lib/cmtk/bin/average_labels
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/c7326180229c28dbd7b0ce98661510324dbebb.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/c7326180229c28dbd7b0ce98661510324dbebb.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/c7326180229c28dbd7b0ce98661510324dbebb.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/c7326180229c28dbd7b0ce98661510324dbebb.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/56
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/56/7d6ecb9d7ca6150c24b8c209f6d9e7cd804f60.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/56/7d6ecb9d7ca6150c24b8c209f6d9e7cd804f60.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/56/7d6ecb9d7ca6150c24b8c209f6d9e7cd804f60.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/56/7d6ecb9d7ca6150c24b8c209f6d9e7cd804f60.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e8
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e8/d092f1d04d52781f0c04ccc294807ca276e347.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e8/d092f1d04d52781f0c04ccc294807ca276e347.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e8/d092f1d04d52781f0c04ccc294807ca276e347.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convert_warp
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e8/d092f1d04d52781f0c04ccc294807ca276e347.debug debian/cmtk/usr/lib/cmtk/bin/convert_warp
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/ccb0bd34bda0903accfde7b2ea9808b8192e15.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/ccb0bd34bda0903accfde7b2ea9808b8192e15.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/ccb0bd34bda0903accfde7b2ea9808b8192e15.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/ccb0bd34bda0903accfde7b2ea9808b8192e15.debug debian/cmtk/usr/lib/cmtk/bin/convertx
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6f
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dbtool debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6f/8e232594c1d799ca043a145b3c8a1588965444.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6f/8e232594c1d799ca043a145b3c8a1588965444.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6f/8e232594c1d799ca043a145b3c8a1588965444.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dbtool
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6f/8e232594c1d799ca043a145b3c8a1588965444.debug debian/cmtk/usr/lib/cmtk/bin/dbtool
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/c8873d44306c86eaedb07128977614280019f9.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/c8873d44306c86eaedb07128977614280019f9.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/c8873d44306c86eaedb07128977614280019f9.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dcm2image
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/c8873d44306c86eaedb07128977614280019f9.debug debian/cmtk/usr/lib/cmtk/bin/dcm2image
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/describe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/db86d6b4b558154377952589d6b80dcd6328a7.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/db86d6b4b558154377952589d6b80dcd6328a7.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/db86d6b4b558154377952589d6b80dcd6328a7.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/describe
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/db86d6b4b558154377952589d6b80dcd6328a7.debug debian/cmtk/usr/lib/cmtk/bin/describe
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/f6e1c714d7092620a2eefeabc73db052f5fba7.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/f6e1c714d7092620a2eefeabc73db052f5fba7.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/f6e1c714d7092620a2eefeabc73db052f5fba7.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/f6e1c714d7092620a2eefeabc73db052f5fba7.debug debian/cmtk/usr/lib/cmtk/bin/destripe
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f275a7a30ac95fdc9e04d8e08dd43898851201.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f275a7a30ac95fdc9e04d8e08dd43898851201.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f275a7a30ac95fdc9e04d8e08dd43898851201.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f275a7a30ac95fdc9e04d8e08dd43898851201.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/b43faf3b234bb0de5ab1cc32a021c3cb92992b.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/b43faf3b234bb0de5ab1cc32a021c3cb92992b.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/b43faf3b234bb0de5ab1cc32a021c3cb92992b.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/b43faf3b234bb0de5ab1cc32a021c3cb92992b.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/5fc945eacda96c9af7027bf308aed2bb69097b.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/5fc945eacda96c9af7027bf308aed2bb69097b.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/5fc945eacda96c9af7027bf308aed2bb69097b.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dof2mat
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/5fc945eacda96c9af7027bf308aed2bb69097b.debug debian/cmtk/usr/lib/cmtk/bin/dof2mat
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a1
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a1/ec2bc94d97c50973dc9af017b0571022990a76.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a1/ec2bc94d97c50973dc9af017b0571022990a76.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a1/ec2bc94d97c50973dc9af017b0571022990a76.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a1/ec2bc94d97c50973dc9af017b0571022990a76.debug debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/99d16ad9d4fe5249108f7544826a7b71d69b49.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/99d16ad9d4fe5249108f7544826a7b71d69b49.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/99d16ad9d4fe5249108f7544826a7b71d69b49.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/99d16ad9d4fe5249108f7544826a7b71d69b49.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fib2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/6bd6010b3386c394eefc597b4f3f43d511dea7.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/6bd6010b3386c394eefc597b4f3f43d511dea7.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/6bd6010b3386c394eefc597b4f3f43d511dea7.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fib2image
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/6bd6010b3386c394eefc597b4f3f43d511dea7.debug debian/cmtk/usr/lib/cmtk/bin/fib2image
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fibxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/195b3996dadf99765529f065898035de14e4de.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/195b3996dadf99765529f065898035de14e4de.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/195b3996dadf99765529f065898035de14e4de.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fibxform
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/195b3996dadf99765529f065898035de14e4de.debug debian/cmtk/usr/lib/cmtk/bin/fibxform
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/e420bc238714ae689082d9cba3c2c94cfb02d2.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/e420bc238714ae689082d9cba3c2c94cfb02d2.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/e420bc238714ae689082d9cba3c2c94cfb02d2.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/e420bc238714ae689082d9cba3c2c94cfb02d2.debug debian/cmtk/usr/lib/cmtk/bin/film
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/73e3c4840ab1e8afbac757a71dcbabdc85b1ac.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/73e3c4840ab1e8afbac757a71dcbabdc85b1ac.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/73e3c4840ab1e8afbac757a71dcbabdc85b1ac.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/filter
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/73e3c4840ab1e8afbac757a71dcbabdc85b1ac.debug debian/cmtk/usr/lib/cmtk/bin/filter
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/746002741157859e1f1a879f680624299663f5.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/746002741157859e1f1a879f680624299663f5.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/746002741157859e1f1a879f680624299663f5.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/746002741157859e1f1a879f680624299663f5.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/4bd63d71195db5e3dbf5486d00647cb1964577.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/4bd63d71195db5e3dbf5486d00647cb1964577.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/4bd63d71195db5e3dbf5486d00647cb1964577.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/4bd63d71195db5e3dbf5486d00647cb1964577.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/bbdb7dee33f2412afd308f3a2c18bf6ce425e9.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/bbdb7dee33f2412afd308f3a2c18bf6ce425e9.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/bbdb7dee33f2412afd308f3a2c18bf6ce425e9.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/bbdb7dee33f2412afd308f3a2c18bf6ce425e9.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/0503a89d961d30f267d4f185fbdce38064b721.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/0503a89d961d30f267d4f185fbdce38064b721.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/0503a89d961d30f267d4f185fbdce38064b721.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/0503a89d961d30f267d4f185fbdce38064b721.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/50
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/50/aa8881444bed3a520aa31300cd266d0c206058.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/50/aa8881444bed3a520aa31300cd266d0c206058.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/50/aa8881444bed3a520aa31300cd266d0c206058.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/50/aa8881444bed3a520aa31300cd266d0c206058.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/geomatch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/ab32803f617e0a09362035de7a74ad1cf314e2.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/ab32803f617e0a09362035de7a74ad1cf314e2.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/ab32803f617e0a09362035de7a74ad1cf314e2.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/geomatch
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/ab32803f617e0a09362035de7a74ad1cf314e2.debug debian/cmtk/usr/lib/cmtk/bin/geomatch
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c5
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/glm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c5/88374f3e77ac497530caa684bdb6ed9c87991d.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c5/88374f3e77ac497530caa684bdb6ed9c87991d.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c5/88374f3e77ac497530caa684bdb6ed9c87991d.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/glm
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c5/88374f3e77ac497530caa684bdb6ed9c87991d.debug debian/cmtk/usr/lib/cmtk/bin/glm
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/082440dcb37dd40a987ddbda337b695882e887.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/082440dcb37dd40a987ddbda337b695882e887.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/082440dcb37dd40a987ddbda337b695882e887.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/082440dcb37dd40a987ddbda337b695882e887.debug debian/cmtk/usr/lib/cmtk/bin/gmm
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/264105c6f7c1429480c9338aba65bab69dadd9.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/264105c6f7c1429480c9338aba65bab69dadd9.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/264105c6f7c1429480c9338aba65bab69dadd9.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/264105c6f7c1429480c9338aba65bab69dadd9.debug debian/cmtk/usr/lib/cmtk/bin/gregxform
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cc
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cc/b3e8868e39064696470deaebd7e84680ddf706.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cc/b3e8868e39064696470deaebd7e84680ddf706.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cc/b3e8868e39064696470deaebd7e84680ddf706.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_affine
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cc/b3e8868e39064696470deaebd7e84680ddf706.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_affine
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bf
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bf/f7dd85001e3f2e700d7f35e132addde7576f4d.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bf/f7dd85001e3f2e700d7f35e132addde7576f4d.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bf/f7dd85001e3f2e700d7f35e132addde7576f4d.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_init
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bf/f7dd85001e3f2e700d7f35e132addde7576f4d.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_init
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3f27dfbfc1c0522b0bfc1e778f36a6f29cf28b.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3f27dfbfc1c0522b0bfc1e778f36a6f29cf28b.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3f27dfbfc1c0522b0bfc1e778f36a6f29cf28b.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3f27dfbfc1c0522b0bfc1e778f36a6f29cf28b.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5cac4722acb27cd6348662b638cc458c41bc2c.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5cac4722acb27cd6348662b638cc458c41bc2c.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5cac4722acb27cd6348662b638cc458c41bc2c.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5cac4722acb27cd6348662b638cc458c41bc2c.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/histogram debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/a9bb792ded5e885df6243f600e7d818adce1cc.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/a9bb792ded5e885df6243f600e7d818adce1cc.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/a9bb792ded5e885df6243f600e7d818adce1cc.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/histogram
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/a9bb792ded5e885df6243f600e7d818adce1cc.debug debian/cmtk/usr/lib/cmtk/bin/histogram
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/cb963892fb8286f0835c072ecc783bb14e3201.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/cb963892fb8286f0835c072ecc783bb14e3201.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/cb963892fb8286f0835c072ecc783bb14e3201.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/cb963892fb8286f0835c072ecc783bb14e3201.debug debian/cmtk/usr/lib/cmtk/bin/imagemath
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6a
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6a/f534951b48003fbe3cad46262b0fbd3e6ca938.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6a/f534951b48003fbe3cad46262b0fbd3e6ca938.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6a/f534951b48003fbe3cad46262b0fbd3e6ca938.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6a/f534951b48003fbe3cad46262b0fbd3e6ca938.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/jidb debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/6d4516519f8b66247da61e87f015947cde42d5.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/6d4516519f8b66247da61e87f015947cde42d5.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/6d4516519f8b66247da61e87f015947cde42d5.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/jidb
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/6d4516519f8b66247da61e87f015947cde42d5.debug debian/cmtk/usr/lib/cmtk/bin/jidb
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cb
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cb/45f9e25a63695a2fb213412936fb305582f7e7.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cb/45f9e25a63695a2fb213412936fb305582f7e7.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cb/45f9e25a63695a2fb213412936fb305582f7e7.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/levelset
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cb/45f9e25a63695a2fb213412936fb305582f7e7.debug debian/cmtk/usr/lib/cmtk/bin/levelset
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/df14f0cb98e5648602a9cec82cd5a098876f35.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/df14f0cb98e5648602a9cec82cd5a098876f35.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/df14f0cb98e5648602a9cec82cd5a098876f35.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/df14f0cb98e5648602a9cec82cd5a098876f35.debug debian/cmtk/usr/lib/cmtk/bin/lmsba
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b5
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b5/c97e2bfdf4eb0ab01e558ad0c75f020755b2bf.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b5/c97e2bfdf4eb0ab01e558ad0c75f020755b2bf.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b5/c97e2bfdf4eb0ab01e558ad0c75f020755b2bf.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b5/c97e2bfdf4eb0ab01e558ad0c75f020755b2bf.debug debian/cmtk/usr/lib/cmtk/bin/lsba
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/558a6808a79b5869d3c7a793a404e33e21b16b.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/558a6808a79b5869d3c7a793a404e33e21b16b.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/558a6808a79b5869d3c7a793a404e33e21b16b.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/558a6808a79b5869d3c7a793a404e33e21b16b.debug debian/cmtk/usr/lib/cmtk/bin/lvote
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/5a702cbbae4c6fe6927733eeb72800907ac9e7.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/5a702cbbae4c6fe6927733eeb72800907ac9e7.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/5a702cbbae4c6fe6927733eeb72800907ac9e7.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/make_initial_affine
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/5a702cbbae4c6fe6927733eeb72800907ac9e7.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/e489c3afad63f0d011df3350c2d0e72cbad502.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/e489c3afad63f0d011df3350c2d0e72cbad502.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/e489c3afad63f0d011df3350c2d0e72cbad502.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/e489c3afad63f0d011df3350c2d0e72cbad502.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ecfa531f4bb61b73073a60dc756bde24de191f.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ecfa531f4bb61b73073a60dc756bde24de191f.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ecfa531f4bb61b73073a60dc756bde24de191f.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/ecfa531f4bb61b73073a60dc756bde24de191f.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/01ff6036a35a1ec335bd28b7e173de14aa736d.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/01ff6036a35a1ec335bd28b7e173de14aa736d.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/01ff6036a35a1ec335bd28b7e173de14aa736d.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcwarp
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/14/01ff6036a35a1ec335bd28b7e173de14aa736d.debug debian/cmtk/usr/lib/cmtk/bin/mcwarp
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/7f490ba5fc8c11ff9d963c5a3ef60c30f2cfbd.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/7f490ba5fc8c11ff9d963c5a3ef60c30f2cfbd.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/7f490ba5fc8c11ff9d963c5a3ef60c30f2cfbd.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/7f490ba5fc8c11ff9d963c5a3ef60c30f2cfbd.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/a2a9439d9a4926ac729c103408165c2d8a56e4.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/a2a9439d9a4926ac729c103408165c2d8a56e4.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/a2a9439d9a4926ac729c103408165c2d8a56e4.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/a2a9439d9a4926ac729c103408165c2d8a56e4.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/43
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/43/cd5e0a5d1af12e5f04afae59eef3823524e453.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/43/cd5e0a5d1af12e5f04afae59eef3823524e453.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/43/cd5e0a5d1af12e5f04afae59eef3823524e453.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/43/cd5e0a5d1af12e5f04afae59eef3823524e453.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/09
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/09/517162de05712c4f1e6fa25daa041dd5516983.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/09/517162de05712c4f1e6fa25daa041dd5516983.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/09/517162de05712c4f1e6fa25daa041dd5516983.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/09/517162de05712c4f1e6fa25daa041dd5516983.debug debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/61d3bf91961a64e2ca05c2ef9e0c4fa95d266e.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/61d3bf91961a64e2ca05c2ef9e0c4fa95d266e.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/61d3bf91961a64e2ca05c2ef9e0c4fa95d266e.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mrbias
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/61d3bf91961a64e2ca05c2ef9e0c4fa95d266e.debug debian/cmtk/usr/lib/cmtk/bin/mrbias
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/be8a61a408e9ba9b71c25de5a763b73708cf14.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/be8a61a408e9ba9b71c25de5a763b73708cf14.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/be8a61a408e9ba9b71c25de5a763b73708cf14.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/be8a61a408e9ba9b71c25de5a763b73708cf14.debug debian/cmtk/usr/lib/cmtk/bin/overlap
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/439d026cdd264cd664448585c91bd89047d95c.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/439d026cdd264cd664448585c91bd89047d95c.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/439d026cdd264cd664448585c91bd89047d95c.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/439d026cdd264cd664448585c91bd89047d95c.debug debian/cmtk/usr/lib/cmtk/bin/probe
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/9e80aa0856743121b7c623b9787987fdada211.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/9e80aa0856743121b7c623b9787987fdada211.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/9e80aa0856743121b7c623b9787987fdada211.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/9e80aa0856743121b7c623b9787987fdada211.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/fb6fb4f130d1fd0d44a6210b7268e331de6bb9.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/fb6fb4f130d1fd0d44a6210b7268e331de6bb9.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/fb6fb4f130d1fd0d44a6210b7268e331de6bb9.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reformatx
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/fb6fb4f130d1fd0d44a6210b7268e331de6bb9.debug debian/cmtk/usr/lib/cmtk/bin/reformatx
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/95806596995b8492203b114535476ba4403576.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/95806596995b8492203b114535476ba4403576.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/95806596995b8492203b114535476ba4403576.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/95806596995b8492203b114535476ba4403576.debug debian/cmtk/usr/lib/cmtk/bin/registration
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/ea2a520014e7dba6c1837f2218877fbe77293c.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/ea2a520014e7dba6c1837f2218877fbe77293c.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/ea2a520014e7dba6c1837f2218877fbe77293c.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/ea2a520014e7dba6c1837f2218877fbe77293c.debug debian/cmtk/usr/lib/cmtk/bin/registrationx
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/regress debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/2a3e72ebf0615f0461339e99d9dba79c42f1cc.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/2a3e72ebf0615f0461339e99d9dba79c42f1cc.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/2a3e72ebf0615f0461339e99d9dba79c42f1cc.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/regress
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/2a3e72ebf0615f0461339e99d9dba79c42f1cc.debug debian/cmtk/usr/lib/cmtk/bin/regress
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reorient debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/6ea9a1398d57f0684b6b2e6bc41ac0fc724359.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/6ea9a1398d57f0684b6b2e6bc41ac0fc724359.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/6ea9a1398d57f0684b6b2e6bc41ac0fc724359.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reorient
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/89/6ea9a1398d57f0684b6b2e6bc41ac0fc724359.debug debian/cmtk/usr/lib/cmtk/bin/reorient
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/ec24c718e73ac7bec1f5c7fdb071819aabab3a.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/ec24c718e73ac7bec1f5c7fdb071819aabab3a.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/ec24c718e73ac7bec1f5c7fdb071819aabab3a.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/ec24c718e73ac7bec1f5c7fdb071819aabab3a.debug debian/cmtk/usr/lib/cmtk/bin/sba
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sbai debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/8b86e99c11196ee6d275a1cf8ce9acbb9c66f3.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/8b86e99c11196ee6d275a1cf8ce9acbb9c66f3.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/8b86e99c11196ee6d275a1cf8ce9acbb9c66f3.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sbai
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/8b86e99c11196ee6d275a1cf8ce9acbb9c66f3.debug debian/cmtk/usr/lib/cmtk/bin/sbai
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sequence debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/a5329a071535f6a6347d6772f13a6ed8afad06.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/a5329a071535f6a6347d6772f13a6ed8afad06.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/a5329a071535f6a6347d6772f13a6ed8afad06.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sequence
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/a5329a071535f6a6347d6772f13a6ed8afad06.debug debian/cmtk/usr/lib/cmtk/bin/sequence
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/similarity debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/977a509896d5f89881d11e0bd59b4f6ada0232.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/977a509896d5f89881d11e0bd59b4f6ada0232.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/977a509896d5f89881d11e0bd59b4f6ada0232.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/similarity
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/977a509896d5f89881d11e0bd59b4f6ada0232.debug debian/cmtk/usr/lib/cmtk/bin/similarity
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/split debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/84b6612a9a85a231a8927f059de4e2f0ac85a0.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/84b6612a9a85a231a8927f059de4e2f0ac85a0.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/84b6612a9a85a231a8927f059de4e2f0ac85a0.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/split
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/84b6612a9a85a231a8927f059de4e2f0ac85a0.debug debian/cmtk/usr/lib/cmtk/bin/split
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/statistics debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/b950aa8aa068a2b3bdae7b7c56f58a564a32d8.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/b950aa8aa068a2b3bdae7b7c56f58a564a32d8.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/b950aa8aa068a2b3bdae7b7c56f58a564a32d8.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/statistics
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e2/b950aa8aa068a2b3bdae7b7c56f58a564a32d8.debug debian/cmtk/usr/lib/cmtk/bin/statistics
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/39
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/39/22a43bfb157d895e27a43c9b4029ec2afe8fc1.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/39/22a43bfb157d895e27a43c9b4029ec2afe8fc1.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/39/22a43bfb157d895e27a43c9b4029ec2afe8fc1.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/stream_pixels
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/39/22a43bfb157d895e27a43c9b4029ec2afe8fc1.debug debian/cmtk/usr/lib/cmtk/bin/stream_pixels
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/5432b1bc02bdbd473a02e4bc352dda69fbfd8d.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/5432b1bc02bdbd473a02e4bc352dda69fbfd8d.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/5432b1bc02bdbd473a02e4bc352dda69fbfd8d.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/5432b1bc02bdbd473a02e4bc352dda69fbfd8d.debug debian/cmtk/usr/lib/cmtk/bin/streamxform
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/57
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/57/e8252a4fab2cd94005890ef56d24be29637151.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/57/e8252a4fab2cd94005890ef56d24be29637151.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/57/e8252a4fab2cd94005890ef56d24be29637151.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/57/e8252a4fab2cd94005890ef56d24be29637151.debug debian/cmtk/usr/lib/cmtk/bin/sympl
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/symplx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/be1ffe121c6c441b66bac09f7aa545a922c596.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/be1ffe121c6c441b66bac09f7aa545a922c596.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/be1ffe121c6c441b66bac09f7aa545a922c596.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/symplx
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/be1ffe121c6c441b66bac09f7aa545a922c596.debug debian/cmtk/usr/lib/cmtk/bin/symplx
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/fd884086710c1767cb28f971960e51bff4acc6.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/fd884086710c1767cb28f971960e51bff4acc6.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/fd884086710c1767cb28f971960e51bff4acc6.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/63/fd884086710c1767cb28f971960e51bff4acc6.debug debian/cmtk/usr/lib/cmtk/bin/ttest
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unsplit debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/880c04bb3bff17e206849e04fb6dec849474b1.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/880c04bb3bff17e206849e04fb6dec849474b1.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/880c04bb3bff17e206849e04fb6dec849474b1.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unsplit
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/880c04bb3bff17e206849e04fb6dec849474b1.debug debian/cmtk/usr/lib/cmtk/bin/unsplit
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/03b615104bbefbb8dec10ec9b3da23291b9082.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/03b615104bbefbb8dec10ec9b3da23291b9082.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/03b615104bbefbb8dec10ec9b3da23291b9082.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/03b615104bbefbb8dec10ec9b3da23291b9082.debug debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/e2c3613c7fdfb3743dd0aae8c24e1d365587ad.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/e2c3613c7fdfb3743dd0aae8c24e1d365587ad.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/e2c3613c7fdfb3743dd0aae8c24e1d365587ad.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vol2csv
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/e2c3613c7fdfb3743dd0aae8c24e1d365587ad.debug debian/cmtk/usr/lib/cmtk/bin/vol2csv
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/8cbdeb73ae4a1af002fa5c4efce9b27920f161.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/8cbdeb73ae4a1af002fa5c4efce9b27920f161.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/8cbdeb73ae4a1af002fa5c4efce9b27920f161.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_injection
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/8cbdeb73ae4a1af002fa5c4efce9b27920f161.debug debian/cmtk/usr/lib/cmtk/bin/volume_injection
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/ee051ccfca91532f54032aa35d86b19b7587d3.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/ee051ccfca91532f54032aa35d86b19b7587d3.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/ee051ccfca91532f54032aa35d86b19b7587d3.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/ee051ccfca91532f54032aa35d86b19b7587d3.debug debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/d25fa5d3f36226220b486ba4180b347819c1e6.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/d25fa5d3f36226220b486ba4180b347819c1e6.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/d25fa5d3f36226220b486ba4180b347819c1e6.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vtkxform
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/d25fa5d3f36226220b486ba4180b347819c1e6.debug debian/cmtk/usr/lib/cmtk/bin/vtkxform
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/5cfd9ba456f1bbd6ab984dcb68402c8b970c83.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/5cfd9ba456f1bbd6ab984dcb68402c8b970c83.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/5cfd9ba456f1bbd6ab984dcb68402c8b970c83.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/5cfd9ba456f1bbd6ab984dcb68402c8b970c83.debug debian/cmtk/usr/lib/cmtk/bin/warp
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/e5fa87c6ec93d143a4d849fd5530ef727ea924.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/e5fa87c6ec93d143a4d849fd5530ef727ea924.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/e5fa87c6ec93d143a4d849fd5530ef727ea924.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/e5fa87c6ec93d143a4d849fd5530ef727ea924.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/1de336aeceab4bcdfe98243ac8546f9cc92aed.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/1de336aeceab4bcdfe98243ac8546f9cc92aed.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/1de336aeceab4bcdfe98243ac8546f9cc92aed.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/1de336aeceab4bcdfe98243ac8546f9cc92aed.debug debian/cmtk/usr/lib/cmtk/bin/warpx
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/4cbcc0839c883aa3c0b9b7eabd8363ffb69f23.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/4cbcc0839c883aa3c0b9b7eabd8363ffb69f23.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/4cbcc0839c883aa3c0b9b7eabd8363ffb69f23.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/4cbcc0839c883aa3c0b9b7eabd8363ffb69f23.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/93a862bc8100918d1ee755d4206427ad2a11a7.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/93a862bc8100918d1ee755d4206427ad2a11a7.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/93a862bc8100918d1ee755d4206427ad2a11a7.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/93a862bc8100918d1ee755d4206427ad2a11a7.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a
objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/343fc74ac783addfc1b0c2fa1d1d2b80331727.debug
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/343fc74ac783addfc1b0c2fa1d1d2b80331727.debug
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/343fc74ac783addfc1b0c2fa1d1d2b80331727.debug
strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar
objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/343fc74ac783addfc1b0c2fa1d1d2b80331727.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar
install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/cmtk/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/cmtk/usr/lib/debug
install -d debian/.debhelper/cmtk/dbgsym-root/usr/share/doc
ln -s cmtk debian/.debhelper/cmtk/dbgsym-root/usr/share/doc/cmtk-dbgsym
dh_makeshlibs -a
rm -f debian/cmtk/DEBIAN/shlibs
dh_shlibdeps -a
install -d debian/cmtk/DEBIAN
dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/imagemath contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/sympl contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/convertx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/filter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/gregxform contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/groupwise_init contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/geomatch contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/volume_injection contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/make_initial_affine contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/pxsearch contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/describe contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/registrationx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkRecon.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/ttest contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/asegment contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/dcm2image contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/jidb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/dbtool contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/average_images contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/probe contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/xform2itk contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/groupwise_affine contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/average_affine contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/avg_adm contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/warp2ps contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mcwarp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/concat_affine contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/average_labels contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mrbias contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/streamxform contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/gmm contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/vtkxform contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/regress contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/epiunwarp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fib2image contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/reorient contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/glm contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/xform2scalar contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/lvote contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/dof2mat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/destripe contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/warpx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/sba contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/sbai contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/reformatx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/registration contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/vol2csv contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/unsplit contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/warp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/sequence contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkBase.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/lsba contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/convert_warp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/fibxform contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/groupwise_warp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mcaffine contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkSystem.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/histogram contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/hausdorff contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/mat2dof contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/symplx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/stream_pixels contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/split contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/levelset contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/statistics contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/overlap contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_setspecific: it's probably a plugin
dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/similarity contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/film contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/xform2dfield contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/bin/lmsba contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so'
dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkIO.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/libcmtkBase.so were not linked against libfftw3_threads.so.3 (they use none of the library's symbols)
dh_installdeb -a
find debian/cmtk/etc -type f -printf '/etc/%P
' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles
chmod 0644 -- debian/cmtk/DEBIAN/conffiles
chown 0:0 -- debian/cmtk/DEBIAN/conffiles
dh_gencontrol -a
echo misc:Depends= >> debian/cmtk.substvars
echo misc:Pre-Depends= >> debian/cmtk.substvars
install -d debian/.debhelper/cmtk/dbgsym-root/DEBIAN
dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/.debhelper/cmtk/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=cmtk-dbgsym "-DDepends=cmtk (= \${binary:Version})" "-DDescription=debug symbols for cmtk" "-DBuild-Ids=00fb6fb4f130d1fd0d44a6210b7268e331de6bb9 055cac4722acb27cd6348662b638cc458c41bc2c 0592533d395a138fefdf1ff660d057849c3c18fc 085432b1bc02bdbd473a02e4bc352dda69fbfd8d 09517162de05712c4f1e6fa25daa041dd5516983 0c61d3bf91961a64e2ca05c2ef9e0c4fa95d266e 0ea2a9439d9a4926ac729c103408165c2d8a56e4 105cfd9ba456f1bbd6ab984dcb68402c8b970c83 11ab32803f617e0a09362035de7a74ad1cf314e2 1401ff6036a35a1ec335bd28b7e173de14aa736d 1499d16ad9d4fe5249108f7544826a7b71d69b49 168cbdeb73ae4a1af002fa5c4efce9b27920f161 1a343fc74ac783addfc1b0c2fa1d1d2b80331727 1da4e65610189b6e5cd05b065a7f710aace07861 22a5329a071535f6a6347d6772f13a6ed8afad06 238b86e99c11196ee6d275a1cf8ce9acbb9c66f3 29ea2a520014e7dba6c1837f2218877fbe77293c 2dabacbb21f9ed11298a969de84c961fbfe73bf6 3203b615104bbefbb8dec10ec9b3da23291b9082 32c7326180229c28dbd7b0ce98661510324dbebb 35cf980ad7d8dd76ee46a55dbac8325504c1c0af 3922a43bfb157d895e27a43c9b4029ec2afe8fc1 3b264105c6f7c1429480c9338aba65bab69dadd9 43cd5e0a5d1af12e5f04afae59eef3823524e453 4aecfa531f4bb61b73073a60dc756bde24de191f 4aef68e4c223e4b8ca8c30269f10694b433681ae 50aa8881444bed3a520aa31300cd266d0c206058 567d6ecb9d7ca6150c24b8c209f6d9e7cd804f60 57e8252a4fab2cd94005890ef56d24be29637151 584cbcc0839c883aa3c0b9b7eabd8363ffb69f23 5a746002741157859e1f1a879f680624299663f5 60e420bc238714ae689082d9cba3c2c94cfb02d2 634bd63d71195db5e3dbf5486d00647cb1964577 63fd884086710c1767cb28f971960e51bff4acc6 66ee051ccfca91532f54032aa35d86b19b7587d3 67195b3996dadf99765529f065898035de14e4de 6af534951b48003fbe3cad46262b0fbd3e6ca938 6c082440dcb37dd40a987ddbda337b695882e887 6f8e232594c1d799ca043a145b3c8a1588965444 7373e3c4840ab1e8afbac757a71dcbabdc85b1ac 7dcb963892fb8286f0835c072ecc783bb14e3201 7ed25fa5d3f36226220b486ba4180b347819c1e6 81e2c3613c7fdfb3743dd0aae8c24e1d365587ad 82b43faf3b234bb0de5ab1cc32a021c3cb92992b 85e489c3afad63f0d011df3350c2d0e72cbad502 885a702cbbae4c6fe6927733eeb72800907ac9e7 88f6e1c714d7092620a2eefeabc73db052f5fba7 896ea9a1398d57f0684b6b2e6bc41ac0fc724359 8995806596995b8492203b114535476ba4403576 8d558a6808a79b5869d3c7a793a404e33e21b16b 920e83ea56f302d0e2857e5643530adf0727d188 95ccb0bd34bda0903accfde7b2ea9808b8192e15 961de336aeceab4bcdfe98243ac8546f9cc92aed 962a3e72ebf0615f0461339e99d9dba79c42f1cc a1ec2bc94d97c50973dc9af017b0571022990a76 a393a862bc8100918d1ee755d4206427ad2a11a7 a53f27dfbfc1c0522b0bfc1e778f36a6f29cf28b ad0503a89d961d30f267d4f185fbdce38064b721 aebbdb7dee33f2412afd308f3a2c18bf6ce425e9 b2977a509896d5f89881d11e0bd59b4f6ada0232 b2e5fa87c6ec93d143a4d849fd5530ef727ea924 b5c97e2bfdf4eb0ab01e558ad0c75f020755b2bf b9be8a61a408e9ba9b71c25de5a763b73708cf14 bcbe1ffe121c6c441b66bac09f7aa545a922c596 bff7dd85001e3f2e700d7f35e132addde7576f4d c06559999fa9a9576eeeef65e13bf7f738503e5e c2df14f0cb98e5648602a9cec82cd5a098876f35 c39e80aa0856743121b7c623b9787987fdada211 c588374f3e77ac497530caa684bdb6ed9c87991d ca6d4516519f8b66247da61e87f015947cde42d5 cb45f9e25a63695a2fb213412936fb305582f7e7 ccb3e8868e39064696470deaebd7e84680ddf706 ce5fc945eacda96c9af7027bf308aed2bb69097b d67f490ba5fc8c11ff9d963c5a3ef60c30f2cfbd daa9bb792ded5e885df6243f600e7d818adce1cc dcfcc1cd7ea65e9fd7d1b74b6a1750c448e0e333 dffa67be27e0410db36d702be3d7d77951640bb0 e0fe7d37d09c4893f480b5314f0f306b275cd861 e2b950aa8aa068a2b3bdae7b7c56f58a564a32d8 e2e6b521146997468154a443c7ac3d4e9f7507b8 e3e08dd94578f9c83668a810cf2b6569f0e63648 e7880c04bb3bff17e206849e04fb6dec849474b1 e8d092f1d04d52781f0c04ccc294807ca276e347 eaec24c718e73ac7bec1f5c7fdb071819aabab3a ef439d026cdd264cd664448585c91bd89047d95c f209ed805638b5b1c7422b68b6100a057f9012c5 f36bd6010b3386c394eefc597b4f3f43d511dea7 f3f275a7a30ac95fdc9e04d8e08dd43898851201 f8b508948e6b093144e3ee4158afb0675f774597 f8c8873d44306c86eaedb07128977614280019f9 f8db86d6b4b558154377952589d6b80dcd6328a7 f984b6612a9a85a231a8927f059de4e2f0ac85a0" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control
dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/cmtk -UMulti-Arch
chmod 0644 -- debian/cmtk/DEBIAN/control
chown 0:0 -- debian/cmtk/DEBIAN/control
dh_md5sums -a
cd debian/cmtk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/cmtk/DEBIAN/md5sums
chown 0:0 -- debian/cmtk/DEBIAN/md5sums
cd debian/.debhelper/cmtk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums
chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a
dpkg-deb --build debian/cmtk ..
dpkg-deb --build debian/.debhelper/cmtk/dbgsym-root ..
dpkg-deb: building package 'cmtk-dbgsym' in '../cmtk-dbgsym_3.3.1p1+dfsg-2_armhf.deb'.
dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../cmtk_3.3.1p1+dfsg-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-11-16T06:21:53Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
cmtk_3.3.1p1+dfsg-2_armhf.changes:
----------------------------------
Format: 1.8
Date: Mon, 11 Nov 2019 11:11:16 +0100
Source: cmtk
Binary: cmtk cmtk-dbgsym
Architecture: armhf
Version: 3.3.1p1+dfsg-2
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
cmtk - Computational Morphometry Toolkit
Closes: 874853
Changes:
cmtk (3.3.1p1+dfsg-2) unstable; urgency=medium
.
* Team upload.
.
[ Moritz Mühlenhoff ]
* Disable the GUI tools in the package build
Closes: #874853
.
[ Andreas Tille ]
* debhelper-compat 9
* Standards-Version: 4.4.1
* Trim trailing whitespace.
* Use secure URI in debian/watch.
* Remove patches missing from debian/patches/series.
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Checksums-Sha256:
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Files:
07deb354c98d8ba1eb704a8d60ff03e8 37272088 debug optional cmtk-dbgsym_3.3.1p1+dfsg-2_armhf.deb
159738e7219649ac870f87585c3e92c0 7884 science optional cmtk_3.3.1p1+dfsg-2_armhf.buildinfo
781b432f42cc8ad97d5ff5f5a2c835b6 2057632 science optional cmtk_3.3.1p1+dfsg-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
cmtk-dbgsym_3.3.1p1+dfsg-2_armhf.deb
------------------------------------
new Debian package, version 2.0.
size 37272088 bytes: control archive=4632 bytes.
4073 bytes, 12 lines control
9836 bytes, 93 lines md5sums
Package: cmtk-dbgsym
Source: cmtk
Version: 3.3.1p1+dfsg-2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: NeuroDebian Team <team@neuro.debian.net>
Installed-Size: 40078
Depends: cmtk (= 3.3.1p1+dfsg-2)
Section: debug
Priority: optional
Description: debug symbols for cmtk
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drwxr-xr-x root/root 0 2019-11-11 10:11 ./
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lrwxrwxrwx root/root 0 2019-11-11 10:11 ./usr/share/doc/cmtk-dbgsym -> cmtk
cmtk_3.3.1p1+dfsg-2_armhf.deb
-----------------------------
new Debian package, version 2.0.
size 2057632 bytes: control archive=5716 bytes.
18 bytes, 1 lines conffiles
1058 bytes, 22 lines control
13370 bytes, 196 lines md5sums
Package: cmtk
Version: 3.3.1p1+dfsg-2
Architecture: armhf
Maintainer: NeuroDebian Team <team@neuro.debian.net>
Installed-Size: 9867
Depends: libbz2-1.0, libc6 (>= 2.29), libdcmtk14, libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:3.5), libgomp1 (>= 6), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4)
Recommends: sri24-atlas
Suggests: numdiff
Section: science
Priority: optional
Homepage: http://www.nitrc.org/projects/cmtk/
Description: Computational Morphometry Toolkit
A software toolkit for computational morphometry of biomedical
images, CMTK comprises a set of command line tools and a back-end
general-purpose library for processing and I/O.
.
The command line tools primarily provide the following functionality:
registration (affine and nonrigid; single and multi-channel; pairwise
and groupwise), image correction (MR bias field estimation;
interleaved image artifact correction), processing (filters;
combination of segmentations via voting and STAPLE; shape-based
averaging), statistics (t-tests; general linear regression).
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| Post Build |
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+------------------------------------------------------------------------------+
| Cleanup |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 651132
Build-Time: 844
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 555
Job: cmtk_3.3.1p1+dfsg-2
Machine Architecture: armhf
Package: cmtk
Package-Time: 1417
Source-Version: 3.3.1p1+dfsg-2
Space: 651132
Status: successful
Version: 3.3.1p1+dfsg-2
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Finished at 2019-11-16T06:21:53Z
Build needed 00:23:37, 651132k disk space