clearcut →
1.0.9+git20150622.7658e90-1 →
armhf → 2021-10-15 05:57:51
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| clearcut 1.0.9+git20150622.7658e90-1 (armhf) Fri, 15 Oct 2021 05:51:30 +0000 |
+==============================================================================+
Package: clearcut
Version: 1.0.9+git20150622.7658e90-1
Source Version: 1.0.9+git20150622.7658e90-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-e3f43b37-cfda-4409-bf0f-e39eec3e7e42' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bookworm-staging/main Sources [12.4 MB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf Packages [13.4 MB]
Fetched 25.9 MB in 31s (823 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'clearcut' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/clearcut.git
Please use:
git clone https://salsa.debian.org/med-team/clearcut.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 282 kB of source archives.
Get:1 http://172.17.0.1/private bookworm-staging/main clearcut 1.0.9+git20150622.7658e90-1 (dsc) [2101 B]
Get:2 http://172.17.0.1/private bookworm-staging/main clearcut 1.0.9+git20150622.7658e90-1 (tar) [274 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main clearcut 1.0.9+git20150622.7658e90-1 (diff) [6192 B]
Fetched 282 kB in 0s (728 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/clearcut-ihjIDH/clearcut-1.0.9+git20150622.7658e90' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/clearcut-ihjIDH' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-NnLuLs/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-NnLuLs/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-NnLuLs/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (2892 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (19.6 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12484 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13)
Filtered Build-Depends: debhelper-compat (= 13)
dpkg-deb: building package 'sbuild-build-depends-clearcut-dummy' in '/<<BUILDDIR>>/resolver-NnLuLs/apt_archive/sbuild-build-depends-clearcut-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-clearcut-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Sources [492 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ Packages [571 B]
Fetched 2396 B in 1s (3147 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install clearcut build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1
libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2
m4 man-db po-debconf sensible-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1
libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2
m4 man-db po-debconf sbuild-build-depends-clearcut-dummy sensible-utils
0 upgraded, 32 newly installed, 0 to remove and 35 not upgraded.
Need to get 17.5 MB of archives.
After this operation, 64.7 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NnLuLs/apt_archive ./ sbuild-build-depends-clearcut-dummy 0.invalid.0 [860 B]
Get:2 http://172.17.0.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.2-3 [135 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-7 [793 kB]
Get:5 http://172.17.0.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bookworm-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:7 http://172.17.0.1/private bookworm-staging/main armhf sensible-utils all 0.0.17 [21.5 kB]
Get:8 http://172.17.0.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:9 http://172.17.0.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:10 http://172.17.0.1/private bookworm-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:11 http://172.17.0.1/private bookworm-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:12 http://172.17.0.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:13 http://172.17.0.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:14 http://172.17.0.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:15 http://172.17.0.1/private bookworm-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:16 http://172.17.0.1/private bookworm-staging/main armhf automake all 1:1.16.4-2 [819 kB]
Get:17 http://172.17.0.1/private bookworm-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:18 http://172.17.0.1/private bookworm-staging/main armhf libdebhelper-perl all 13.5.2 [192 kB]
Get:19 http://172.17.0.1/private bookworm-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:20 http://172.17.0.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:21 http://172.17.0.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:22 http://172.17.0.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:23 http://172.17.0.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get:24 http://172.17.0.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get:25 http://172.17.0.1/private bookworm-staging/main armhf libelf1 armhf 0.185-2 [168 kB]
Get:26 http://172.17.0.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:27 http://172.17.0.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:28 http://172.17.0.1/private bookworm-staging/main armhf libxml2 armhf 2.9.12+dfsg-5 [584 kB]
Get:29 http://172.17.0.1/private bookworm-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:30 http://172.17.0.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:31 http://172.17.0.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:32 http://172.17.0.1/private bookworm-staging/main armhf debhelper all 13.5.2 [1056 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package bsdextrautils.
(Reading database ... 12484 files and directories currently installed.)
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Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ...
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Unpacking sbuild-build-depends-clearcut-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.37.2-3) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.5.2) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up gettext-base (0.21-4) ...
Setting up file (1:5.39-3) ...
Setting up autotools-dev (20180224.1+nmu1) ...
Setting up libsigsegv2:armhf (2.13-1) ...
Setting up autopoint (0.21-4) ...
Setting up sensible-utils (0.0.17) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.185-2) ...
Setting up libxml2:armhf (2.9.12+dfsg-5) ...
Setting up libfile-stripnondeterminism-perl (1.12.0-1) ...
Setting up gettext (0.21-4) ...
Setting up libtool (2.4.6-15) ...
Setting up m4 (1.4.18-5) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.71-2) ...
Setting up dh-strip-nondeterminism (1.12.0-1) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-7) ...
Setting up automake (1:1.16.4-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up debhelper (13.5.2) ...
Setting up sbuild-build-depends-clearcut-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.32-4+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.37-5+rpi1 dpkg-dev_1.20.9+rpi1 g++-10_10.3.0-9+rpi1 gcc-10_10.3.0-9+rpi1 libc6-dev_2.32-4+rpi1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 linux-libc-dev_5.10.46-4+rpi1
Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12+rpi1 base-passwd_3.5.51 bash_5.1-3 binutils_2.37-5+rpi1 binutils-arm-linux-gnueabihf_2.37-5+rpi1 binutils-common_2.37-5+rpi1 bsdextrautils_2.37.2-3 bsdutils_1:2.37.2-1 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.3.0-9+rpi1 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.5.2 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1+rpi1 g++-10_10.3.0-9+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.3.0-9+rpi1 gcc-10-base_10.3.0-9+rpi1 gcc-11-base_11.2.0-4+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.3.9 libarchive-zip-perl_1.68-1 libasan6_11.2.0-4+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-4+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.5-1 libaudit1_1:3.0.5-1 libbinutils_2.37-5+rpi1 libblkid1_2.37.2-1 libbz2-1.0_1.0.8-4 libc-bin_2.32-4+rpi1 libc-dev-bin_2.32-4+rpi1 libc6_2.32-4+rpi1 libc6-dev_2.32-4+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_11.2.0-4+rpi1 libcom-err2_1.46.4-1 libcrypt-dev_1:4.4.25-2 libcrypt1_1:4.4.25-2 libctf-nobfd0_2.37-5+rpi1 libctf0_2.37-5+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.5.2 libdpkg-perl_1.20.9+rpi1 libelf1_0.185-2 libext2fs2_1.46.4-1 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libfile-stripnondeterminism-perl_1.12.0-1 libgcc-10-dev_10.3.0-9+rpi1 libgcc-s1_11.2.0-4+rpi1 libgcrypt20_1.9.4-3 libgdbm-compat4_1.21-1 libgdbm6_1.21-1 libgmp10_2:6.2.1+dfsg-2 libgnutls30_3.7.2-2 libgomp1_11.2.0-4+rpi1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.23-1 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 libksba8_1.6.0-2 libldap-2.4-2_2.4.59+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.37.2-1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-4 libnettle8_3.7.3-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-2 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-5 libpipeline1_1.5.3-1 libreadline8_8.1-2 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1+rpi1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.37.2-1 libsqlite3-0_3.36.0-2 libss2_1.46.4-1 libssl1.1_1.1.1l-1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 libsub-override-perl_0.09-2 libsystemd0_247.9-1+rpi1 libtasn1-6_4.17.0-2 libtext-charwidth-perl_0.04-10+b1 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20201114-4 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libubsan1_11.2.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_247.9-1+rpi1 libunistring2_0.9.10-6 libuuid1_2.37.2-1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2.1+rpi1 linux-libc-dev_5.10.46-4+rpi1 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.37.2-1 ncurses-base_6.2+20201114-4 ncurses-bin_6.2+20201114-4 netbase_6.3 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-5 perl-base_5.32.1-5 perl-modules-5.32_5.32.1-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-clearcut-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021a-1 util-linux_2.37.2-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.MKckegqf/trustedkeys.kbx': General error
gpgv: Signature made Wed Oct 13 10:06:15 2021 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./clearcut_1.0.9+git20150622.7658e90-1.dsc
dpkg-source: info: extracting clearcut in /<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90
dpkg-source: info: unpacking clearcut_1.0.9+git20150622.7658e90.orig.tar.xz
dpkg-source: info: unpacking clearcut_1.0.9+git20150622.7658e90-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying mothur_trivial_patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying clear-errno-before-checking.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-e3f43b37-cfda-4409-bf0f-e39eec3e7e42
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package clearcut
dpkg-buildpackage: info: source version 1.0.9+git20150622.7658e90-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90'
Makefile:124: warning: ignoring prerequisites on suffix rule definition
rm -f *.o a.out *.a clearcut
make[1]: Leaving directory '/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90'
Makefile:124: warning: ignoring prerequisites on suffix rule definition
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer clearcut.c
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer dist.c
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer dmat.c
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer fasta.c
dist.c: In function 'NJ_DNA_jc_correction':
dist.c:268:12: warning: variable 'k' set but not used [-Wunused-but-set-variable]
268 | long int k;
| ^
clearcut.c: In function 'NJ_neighbor_joining':
clearcut.c:1106:9: warning: variable 'min' set but not used [-Wunused-but-set-variable]
1106 | float min;
| ^~~
fasta.c: In function 'NJ_read_fasta':
fasta.c:307:19: warning: variable 'x' set but not used [-Wunused-but-set-variable]
307 | long int index, x, seq;
| ^
clearcut.c: In function 'NJ_relaxed_nj':
clearcut.c:1224:12: warning: variable 'q' set but not used [-Wunused-but-set-variable]
1224 | float p, q, x;
| ^
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer cmdargs.c
dist.c: In function 'NJ_compute_dmat':
dist.c:154:5: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
154 | strncpy(dmat->taxaname[i], alignment->titles[i], strlen(alignment->titles[i]));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer prng.c
gcc -c -I /usr/local/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer getopt_long.c
gcc -o clearcut clearcut.o dist.o dmat.o fasta.o cmdargs.o prng.o getopt_long.o -lm -Wl,-z,relro
make[1]: Leaving directory '/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install --destdir=debian/clearcut/ -a
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90'
dh_compress -X.dist
make[1]: Leaving directory '/<<BUILDDIR>>/clearcut-1.0.9+git20150622.7658e90'
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/clearcut/usr/bin/clearcut was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'clearcut' in '../clearcut_1.0.9+git20150622.7658e90-1_armhf.deb'.
dpkg-deb: building package 'clearcut-dbgsym' in '../clearcut-dbgsym_1.0.9+git20150622.7658e90-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../clearcut_1.0.9+git20150622.7658e90-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-10-15T05:57:46Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
clearcut_1.0.9+git20150622.7658e90-1_armhf.changes:
---------------------------------------------------
Format: 1.8
Date: Wed, 13 Oct 2021 12:04:54 +0200
Source: clearcut
Binary: clearcut clearcut-dbgsym
Architecture: armhf
Version: 1.0.9+git20150622.7658e90-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
clearcut - extremely efficient phylogenetic tree reconstruction
Changes:
clearcut (1.0.9+git20150622.7658e90-1) unstable; urgency=medium
.
* Use git mode since upstream did not consider tagging despite
issue was filed
* Remove Tim Booth from Uploaders (Thanks for all your work Tim)
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit.
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6d3a85cfc02cc0f68089b1ca90596c0ef15f42d0 5013 clearcut_1.0.9+git20150622.7658e90-1_armhf.buildinfo
14aa699010fcde1caf2b3b8f070c44ee4881dd61 274304 clearcut_1.0.9+git20150622.7658e90-1_armhf.deb
Checksums-Sha256:
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838766e6b9a31c641372068f77e069b4f43e1211a3bc98eb5ea97622763bac75 5013 clearcut_1.0.9+git20150622.7658e90-1_armhf.buildinfo
a9301f9443078a233a2005aec0179d4fccc3ee0a832e5a3e4df892457b28e6f2 274304 clearcut_1.0.9+git20150622.7658e90-1_armhf.deb
Files:
6dd97acca52627e00ca55840c5fa569a 62232 debug optional clearcut-dbgsym_1.0.9+git20150622.7658e90-1_armhf.deb
a8061aeb816942161cf21a15ee0b2005 5013 science optional clearcut_1.0.9+git20150622.7658e90-1_armhf.buildinfo
fb6bcbb6d2c7330ba78047ee55adfa11 274304 science optional clearcut_1.0.9+git20150622.7658e90-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
clearcut-dbgsym_1.0.9+git20150622.7658e90-1_armhf.deb
-----------------------------------------------------
new Debian package, version 2.0.
size 62232 bytes: control archive=552 bytes.
413 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: clearcut-dbgsym
Source: clearcut
Version: 1.0.9+git20150622.7658e90-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 77
Depends: clearcut (= 1.0.9+git20150622.7658e90-1)
Section: debug
Priority: optional
Description: debug symbols for clearcut
Build-Ids: dcbee545cb22e045b92b58efcea4e9b5865393c9
drwxr-xr-x root/root 0 2021-10-13 10:04 ./
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/lib/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/lib/debug/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/lib/debug/.build-id/dc/
-rw-r--r-- root/root 68188 2021-10-13 10:04 ./usr/lib/debug/.build-id/dc/bee545cb22e045b92b58efcea4e9b5865393c9.debug
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/doc/
lrwxrwxrwx root/root 0 2021-10-13 10:04 ./usr/share/doc/clearcut-dbgsym -> clearcut
clearcut_1.0.9+git20150622.7658e90-1_armhf.deb
----------------------------------------------
new Debian package, version 2.0.
size 274304 bytes: control archive=996 bytes.
589 bytes, 14 lines control
737 bytes, 10 lines md5sums
Package: clearcut
Version: 1.0.9+git20150622.7658e90-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1191
Depends: libc6 (>= 2.29)
Section: science
Priority: optional
Homepage: https://github.com/sheneman/clearcut
Description: extremely efficient phylogenetic tree reconstruction
Clearcut is the reference implementation for the Relaxed Neighbor Joining (RNJ)
algorithm by J. Evans, L. Sheneman, and J. Foster from the Initiative
for Bioinformatics and Evolutionary Studies (IBEST) at the University of
Idaho.
drwxr-xr-x root/root 0 2021-10-13 10:04 ./
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/bin/
-rwxr-xr-x root/root 67928 2021-10-13 10:04 ./usr/bin/clearcut
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/doc/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/doc/clearcut/
-rw-r--r-- root/root 2416 2015-06-22 18:04 ./usr/share/doc/clearcut/README.gz
-rw-r--r-- root/root 998 2021-10-13 10:04 ./usr/share/doc/clearcut/changelog.Debian.gz
-rw-r--r-- root/root 3073 2021-10-13 10:04 ./usr/share/doc/clearcut/copyright
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/doc/clearcut/examples/
-rw-r--r-- root/root 322 2015-06-22 18:04 ./usr/share/doc/clearcut/examples/alignment1.dist
-rw-r--r-- root/root 116 2015-06-22 18:04 ./usr/share/doc/clearcut/examples/lower_diag.dist
-rw-r--r-- root/root 211 2015-06-22 18:04 ./usr/share/doc/clearcut/examples/symmetric.dist
-rw-r--r-- root/root 1126705 2015-06-22 18:04 ./usr/share/doc/clearcut/examples/treezilla.dist
-rw-r--r-- root/root 154 2015-06-22 18:04 ./usr/share/doc/clearcut/examples/upper_diag.dist
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/man/
drwxr-xr-x root/root 0 2021-10-13 10:04 ./usr/share/man/man1/
-rw-r--r-- root/root 919 2021-10-13 10:04 ./usr/share/man/man1/clearcut.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 3808
Build-Time: 53
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 267
Job: clearcut_1.0.9+git20150622.7658e90-1
Machine Architecture: armhf
Package: clearcut
Package-Time: 376
Source-Version: 1.0.9+git20150622.7658e90-1
Space: 3808
Status: successful
Version: 1.0.9+git20150622.7658e90-1
--------------------------------------------------------------------------------
Finished at 2021-10-15T05:57:46Z
Build needed 00:06:16, 3808k disc space