cd-hit →
4.8.1-4 →
armhf → 2021-08-23 04:31:18
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| cd-hit 4.8.1-4 (armhf) Mon, 23 Aug 2021 04:24:07 +0000 |
+==============================================================================+
Package: cd-hit
Version: 4.8.1-4
Source Version: 4.8.1-4
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-be9dc379-5d3d-4640-86f8-5bb1ddb6126e' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bookworm-staging/main Sources [12.3 MB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf Packages [13.3 MB]
Fetched 25.6 MB in 29s (897 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'cd-hit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/cd-hit.git
Please use:
git clone https://salsa.debian.org/med-team/cd-hit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 956 kB of source archives.
Get:1 http://172.17.0.1/private bookworm-staging/main cd-hit 4.8.1-4 (dsc) [2032 B]
Get:2 http://172.17.0.1/private bookworm-staging/main cd-hit 4.8.1-4 (tar) [946 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main cd-hit 4.8.1-4 (diff) [8128 B]
Fetched 956 kB in 0s (2173 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/cd-hit-FRJuNA/cd-hit-4.8.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/cd-hit-FRJuNA' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-dAvUTw/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-dAvUTw/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-dAvUTw/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2918 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 10 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.3 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12488 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev
Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-cd-hit-dummy' in '/<<BUILDDIR>>/resolver-dAvUTw/apt_archive/sbuild-build-depends-cd-hit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-cd-hit-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Sources [505 B]
Get:5 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ Packages [586 B]
Fetched 2424 B in 1s (3336 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install cd-hit build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base help2man intltool-debian libarchive-zip-perl libdebhelper-perl
libelf1 libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1
libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2
m4 man-db po-debconf sensible-utils zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base help2man intltool-debian libarchive-zip-perl libdebhelper-perl
libelf1 libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1
libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2
m4 man-db po-debconf sbuild-build-depends-cd-hit-dummy sensible-utils
zlib1g-dev
0 upgraded, 34 newly installed, 0 to remove and 10 not upgraded.
Need to get 17.8 MB of archives.
After this operation, 65.5 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-dAvUTw/apt_archive ./ sbuild-build-depends-cd-hit-dummy 0.invalid.0 [876 B]
Get:2 http://172.17.0.1/private bookworm-staging/main armhf bsdextrautils armhf 2.36.1-8 [137 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-6 [793 kB]
Get:5 http://172.17.0.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bookworm-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:7 http://172.17.0.1/private bookworm-staging/main armhf sensible-utils all 0.0.14 [14.8 kB]
Get:8 http://172.17.0.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:9 http://172.17.0.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:10 http://172.17.0.1/private bookworm-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:11 http://172.17.0.1/private bookworm-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:12 http://172.17.0.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:13 http://172.17.0.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:14 http://172.17.0.1/private bookworm-staging/main armhf autoconf all 2.69-14 [313 kB]
Get:15 http://172.17.0.1/private bookworm-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:16 http://172.17.0.1/private bookworm-staging/main armhf automake all 1:1.16.3-2 [814 kB]
Get:17 http://172.17.0.1/private bookworm-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:18 http://172.17.0.1/private bookworm-staging/main armhf libdebhelper-perl all 13.3.4 [189 kB]
Get:19 http://172.17.0.1/private bookworm-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:20 http://172.17.0.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:21 http://172.17.0.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:22 http://172.17.0.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:23 http://172.17.0.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get:24 http://172.17.0.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get:25 http://172.17.0.1/private bookworm-staging/main armhf libelf1 armhf 0.185-2 [168 kB]
Get:26 http://172.17.0.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:27 http://172.17.0.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:28 http://172.17.0.1/private bookworm-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [580 kB]
Get:29 http://172.17.0.1/private bookworm-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:30 http://172.17.0.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:31 http://172.17.0.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:32 http://172.17.0.1/private bookworm-staging/main armhf debhelper all 13.3.4 [1049 kB]
Get:33 http://172.17.0.1/private bookworm-staging/main armhf help2man armhf 1.48.4 [143 kB]
Get:34 http://172.17.0.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 17.8 MB in 6s (3006 kB/s)
Selecting previously unselected package bsdextrautils.
(Reading database ... 12488 files and directories currently installed.)
Preparing to unpack .../00-bsdextrautils_2.36.1-8_armhf.deb ...
Unpacking bsdextrautils (2.36.1-8) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ...
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Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ...
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Unpacking man-db (2.9.4-2) ...
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Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ...
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Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_armhf.deb ...
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Unpacking sbuild-build-depends-cd-hit-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.36.1-8) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.3.4) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up gettext-base (0.21-4) ...
Setting up file (1:5.39-3) ...
Setting up help2man (1.48.4) ...
Setting up autotools-dev (20180224.1+nmu1) ...
Setting up libsigsegv2:armhf (2.13-1) ...
Setting up autopoint (0.21-4) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.14) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.185-2) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.7) ...
Setting up libfile-stripnondeterminism-perl (1.12.0-1) ...
Setting up gettext (0.21-4) ...
Setting up libtool (2.4.6-15) ...
Setting up m4 (1.4.18-5) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.69-14) ...
Setting up dh-strip-nondeterminism (1.12.0-1) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-6) ...
Setting up automake (1:1.16.3-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up debhelper (13.3.4) ...
Setting up sbuild-build-depends-cd-hit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-13+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.2-2+rpi1 dpkg-dev_1.20.9+rpi1 g++-10_10.2.1-6+rpi1 gcc-10_10.2.1-6+rpi1 libc6-dev_2.31-13+rpi1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 linux-libc-dev_5.10.46-4+rpi1
Package versions: adduser_3.118 apt_2.2.4 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1+rpi1 base-passwd_3.5.51 bash_5.1-2 binutils_2.35.2-2+rpi1 binutils-arm-linux-gnueabihf_2.35.2-2+rpi1 binutils-common_2.35.2-2+rpi1 bsdextrautils_2.36.1-8 bsdutils_1:2.36.1-8 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.2.1-6+rpi1 dash_0.5.11+git20200708+dd9ef66-5 debconf_1.5.77 debhelper_13.3.4 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.2-2 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1+rpi1 g++-10_10.2.1-6+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.2.1-6+rpi1 gcc-10-base_10.2.1-6+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.3.0-22+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 help2man_1.48.4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg6.0_2.2.4 libarchive-zip-perl_1.68-1 libasan6_10.2.1-6+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-6+rpi1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2+rpi1 libblkid1_2.36.1-8 libbz2-1.0_1.0.8-4 libc-bin_2.31-13+rpi1 libc-dev-bin_2.31-13+rpi1 libc6_2.31-13+rpi1 libc6-dev_2.31-13+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6+rpi1 libcom-err2_1.46.2-2 libcrypt-dev_1:4.4.18-4 libcrypt1_1:4.4.18-4 libctf-nobfd0_2.35.2-2+rpi1 libctf0_2.35.2-2+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.3.4 libdpkg-perl_1.20.9+rpi1 libelf1_0.185-2 libext2fs2_1.46.2-2 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libfile-stripnondeterminism-perl_1.12.0-1 libgcc-10-dev_10.2.1-6+rpi1 libgcc-s1_10.2.1-6+rpi1 libgcrypt20_1.8.7-6 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-5 libgomp1_10.2.1-6+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-6 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.0-5 libisl23_0.23-1 libk5crypto3_1.18.3-6 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-6 libkrb5support0_1.18.3-6 libksba8_1.5.0-3 libldap-2.4-2_2.4.57+dfsg-3 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-8 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-2 libnettle8_3.7.3-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-9 libpam-modules-bin_1.4.0-9 libpam-runtime_1.4.0-9 libpam0g_1.4.0-9 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-4+deb11u1 libpipeline1_1.5.3-1 libreadline8_8.1-1 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1+rpi1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-8 libsqlite3-0_3.34.1-3 libss2_1.46.2-2 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 libsub-override-perl_0.09-2 libsystemd0_247.3-6+rpi1 libtasn1-6_4.16.0-2 libtext-charwidth-perl_0.04-10+b1 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libubsan1_10.2.1-6+rpi1 libuchardet0_0.0.7-1 libudev1_247.3-6+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-8 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2.1+rpi1 linux-libc-dev_5.10.46-4+rpi1 login_1:4.8.1-1 logsave_1.46.2-2 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-8 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 netbase_6.3 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-4+deb11u1 perl-base_5.32.1-4+deb11u1 perl-modules-5.32_5.32.1-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.1-2 sbuild-build-depends-cd-hit-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 util-linux_2.36.1-8 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.bccBKCZu/trustedkeys.kbx': General error
gpgv: Signature made Fri Aug 20 08:53:31 2021 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./cd-hit_4.8.1-4.dsc
dpkg-source: info: extracting cd-hit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking cd-hit_4.8.1.orig.tar.gz
dpkg-source: info: unpacking cd-hit_4.8.1-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying enable_help2man.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-be9dc379-5d3d-4640-86f8-5bb1ddb6126e
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package cd-hit
dpkg-buildpackage: info: source version 4.8.1-4
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f *.o cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- openmp=yes CC='$(CXX)'
make -j4 "INSTALL=install --strip-program=true" openmp=yes CC=\$\(CXX\)
make[2]: Entering directory '/<<PKGBUILDDIR>>'
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-common.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-utility.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.c++ -c
cdhit-utility.c++:9:79: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
9 | char cd_hit_ver[] = "\t\t====== CD-HIT version " CDHIT_VERSION " (built on " __DATE__ ") ======";
| ^~~~~~~~
cdhit-common.c++:322:16: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
322 | strcpy( date, __DATE__ );
| ^~~~~~~~
cdhit-common.c++:326:66: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
326 | printf( "Program: CD-HIT, V" CDHIT_VERSION WITH_OPENMP ", %s, " __TIME__ "\n", date );
| ^~~~~~~~
cdhit-common.c++: In member function 'void SequenceDB::DoClustering(const Options&)':
cdhit-common.c++:3775:56: warning: format '%li' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
3775 | printf( "\nApproximated maximum memory consumption: %liM\n", mem );
| ~~^ ~~~
| | |
| | size_t {aka unsigned int}
| long int
| %i
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.c++ -c
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from /usr/include/c++/10/valarray:38,
from cdhit-common.h:42,
from cdhit-common.c++:28:
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from /usr/include/c++/10/valarray:38,
from cdhit-common.h:42,
from cdhit-common.c++:28:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.c++ -c
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1881:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1881 | __final_insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1881:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1881:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1881 | __final_insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1881:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'void SequenceDB::WriteClustersgz(const char*, const char*, const Options&)':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'void SequenceDB::WriteClusters(const char*, const char*, const Options&)':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'void SequenceDB::WriteClustersgz(const char*, const char*, const char*, const char*, const Options&)':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'void SequenceDB::WriteClusters(const char*, const char*, const char*, const char*, const Options&)':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'void SequenceDB::WriteExtra1D(const Options&)':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'void SequenceDB::WriteExtra2D(SequenceDB&, const Options&)':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
1977 | std::__final_insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-est
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-2d
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-est-2d
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-div
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-454
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_installdirs -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -- PREFIX=debian/cd-hit/usr/lib/cd-hit
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/cd-hit AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=debian/cd-hit/usr/lib/cd-hit
make[2]: Entering directory '/<<PKGBUILDDIR>>'
for prog in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454; do \
install -m 0755 $prog debian/cd-hit/usr/lib/cd-hit; \
done
install -m 0755 *.pl debian/cd-hit/usr/lib/cd-hit;
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1/
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='quickly group sequences' \
/<<PKGBUILDDIR>>/cd-hit > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='quickly group sequences, optimised for 454 data' \
/<<PKGBUILDDIR>>/cd-hit-454 > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-454.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='quickly group sequences in db1 or db2 format' \
/<<PKGBUILDDIR>>/cd-hit-2d > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-2d.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='run CD-HIT algorithm on RNA/DNA sequences' \
/<<PKGBUILDDIR>>/cd-hit-est > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-est.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='run CD-HIT algorithm on RNA/DNA sequences in db1 or db2 format' \
/<<PKGBUILDDIR>>/cd-hit-est-2d > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-est-2d.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='divide a big clustering job into pieces to run cd-hit-2d or cd-hit-est-2d jobs' \
/<<PKGBUILDDIR>>/cd-hit-2d-para.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-2d-para.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='divide a big clustering job into pieces to run cd-hit or cd-hit-est jobs' \
/<<PKGBUILDDIR>>/cd-hit-para.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-para.1
help2man --no-info --no-discard-stderr --version-string='4.8.1' \
--name='divide a FASTA file into pieces' \
/<<PKGBUILDDIR>>/cd-hit-div.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-div.1
# psi-cd-hit.pl is throwing some errors which are fixed using sed
# ... at least in versions <= 4.6.4 - now help2man does not work at all
#help2man --no-info --no-discard-stderr --version-string='4.8.1' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities' \
# /<<PKGBUILDDIR>>/psi-cd-hit.pl | \
# sed -e '/^Name "main::.*" used only once:/d' \
# > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit.1
# help2man does not work at all since version 4.6.4
#help2man --no-info --no-discard-stderr --version-string='4.8.1' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \
# /<<PKGBUILDDIR>>/psi-cd-hit-2d.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d.1
# FIXME: what is the difference between psi-cd-hit-2d.pl and psi-cd-hit-2d-g1.pl ?
# help2man does not work at all since version 4.6.4
#help2man --no-info --no-discard-stderr --version-string='4.8.1' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \
# /<<PKGBUILDDIR>>/psi-cd-hit-2d-g1.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d-g1.1
# No help output from
# clstr2tree.pl
# clstr_merge.pl
# clstr_merge_noorder.pl
# clstr_reduce.pl
# clstr_renumber.pl
# clstr_rev.pl
# clstr_sort_by.pl
# clstr_sort_prot_by
# make_multi_seq
# psi-cd-hit-local.pl -> even throws several "used only once: possible typo" errors
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_missing -a
dh_dwz -a -a
dh_strip -a -a
dh_makeshlibs -a -a
dh_shlibdeps -a -a
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-est contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-454 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-2d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-div contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cd-hit/usr/lib/cd-hit/cd-hit-est debian/cd-hit/usr/lib/cd-hit/cd-hit debian/cd-hit/usr/lib/cd-hit/cd-hit-454 debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-div were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'cd-hit-dbgsym' in '../cd-hit-dbgsym_4.8.1-4_armhf.deb'.
dpkg-deb: building package 'cd-hit' in '../cd-hit_4.8.1-4_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../cd-hit_4.8.1-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-08-23T04:31:09Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
cd-hit_4.8.1-4_armhf.changes:
-----------------------------
Format: 1.8
Date: Fri, 20 Aug 2021 10:39:56 +0200
Source: cd-hit
Binary: cd-hit cd-hit-dbgsym
Architecture: armhf
Version: 4.8.1-4
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Description:
cd-hit - suite of programs designed to quickly group sequences
Closes: 992052
Changes:
cd-hit (4.8.1-4) unstable; urgency=medium
.
* d/watch: fix broken link to github
* d/control: add myself to uploaders
* d/t/run-unit-test: disable memory limits in tests (Closes: #992052)
* Standards-Version: 4.6.0 (routine-update)
Checksums-Sha1:
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dd2e783814fa5bda4617622eb129e3c458852ece 4912 cd-hit_4.8.1-4_armhf.buildinfo
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Checksums-Sha256:
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d163e114da355085d7d94b6e2c356008344e1b8b8e5f45c617236f2d67aec50b 4912 cd-hit_4.8.1-4_armhf.buildinfo
c34e31c38642bf6f172054685a0a69716607193c0d46d72a3c039c5530014201 493792 cd-hit_4.8.1-4_armhf.deb
Files:
0700c87668dc29b84d3757ce2f536c83 1615244 debug optional cd-hit-dbgsym_4.8.1-4_armhf.deb
5be4b6d6668616bf53a46a368652d533 4912 science optional cd-hit_4.8.1-4_armhf.buildinfo
e3a47d7e80679368273465f3a2eb2a72 493792 science optional cd-hit_4.8.1-4_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
cd-hit-dbgsym_4.8.1-4_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 1615244 bytes: control archive=852 bytes.
572 bytes, 12 lines control
722 bytes, 7 lines md5sums
Package: cd-hit-dbgsym
Source: cd-hit
Version: 4.8.1-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1800
Depends: cd-hit (= 4.8.1-4)
Section: debug
Priority: optional
Description: debug symbols for cd-hit
Build-Ids: 10bcd42b7d4ca0bb7d694b68d2c2aa8993484944 2149db828560def6d1aba135bfcc338e48dfc5ff ab2459beecfb3988da21cfd0ce22b86071b38749 c44265eef836c3cfa1ad8dfd726f4aed387b4c98 cd8612bc83729ac5aa3996406886d5979658a912 f8c24bf8411442c91223403d39756992e04710d9
drwxr-xr-x root/root 0 2021-08-20 08:39 ./
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/10/
-rw-r--r-- root/root 278468 2021-08-20 08:39 ./usr/lib/debug/.build-id/10/bcd42b7d4ca0bb7d694b68d2c2aa8993484944.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/21/
-rw-r--r-- root/root 280804 2021-08-20 08:39 ./usr/lib/debug/.build-id/21/49db828560def6d1aba135bfcc338e48dfc5ff.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/ab/
-rw-r--r-- root/root 277684 2021-08-20 08:39 ./usr/lib/debug/.build-id/ab/2459beecfb3988da21cfd0ce22b86071b38749.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/c4/
-rw-r--r-- root/root 282604 2021-08-20 08:39 ./usr/lib/debug/.build-id/c4/4265eef836c3cfa1ad8dfd726f4aed387b4c98.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/cd/
-rw-r--r-- root/root 277800 2021-08-20 08:39 ./usr/lib/debug/.build-id/cd/8612bc83729ac5aa3996406886d5979658a912.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/f8/
-rw-r--r-- root/root 288084 2021-08-20 08:39 ./usr/lib/debug/.build-id/f8/c24bf8411442c91223403d39756992e04710d9.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 137000 2021-08-20 08:39 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/cd-hit.debug
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit-dbgsym -> cd-hit
cd-hit_4.8.1-4_armhf.deb
------------------------
new Debian package, version 2.0.
size 493792 bytes: control archive=2148 bytes.
914 bytes, 17 lines control
3454 bytes, 52 lines md5sums
Package: cd-hit
Version: 4.8.1-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1235
Depends: libc6 (>= 2.7), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), perl:any
Section: science
Priority: optional
Homepage: http://weizhongli-lab.org/cd-hit/
Description: suite of programs designed to quickly group sequences
cd-hit contains a number of programs designed to quickly group
sequences. cd-hit groups proteins into clusters that meet a user-defined
similarity threshold. cd-hit-est is similar to cd-hit, but designed to
group nucleotide sequences (without introns). cd-hit-est-2d is similar
to cd-hit-2d but designed to compare two nucleotide datasets. A number
of other related programs are also in this package. Please see the
cd-hit user manual, also part of this package, for further information.
drwxr-xr-x root/root 0 2021-08-20 08:39 ./
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/bin/
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit -> ../lib/cd-hit/cd-hit
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-2d -> ../lib/cd-hit/cd-hit-2d
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-2d-para -> ../lib/cd-hit/cd-hit-2d-para.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-454 -> ../lib/cd-hit/cd-hit-454
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-div -> ../lib/cd-hit/cd-hit-div.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-est -> ../lib/cd-hit/cd-hit-est
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-est-2d -> ../lib/cd-hit/cd-hit-est-2d
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-para -> ../lib/cd-hit/cd-hit-para.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit -> cd-hit
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-2d -> cd-hit-2d
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-454 -> cd-hit-454
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-est -> cd-hit-est
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-est-2d -> cd-hit-est-2d
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr2tree -> ../lib/cd-hit/clstr2tree.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_merge -> ../lib/cd-hit/clstr_merge.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_merge_noorder -> ../lib/cd-hit/clstr_merge_noorder.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_reduce -> ../lib/cd-hit/clstr_reduce.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_renumber -> ../lib/cd-hit/clstr_renumber.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_rev -> ../lib/cd-hit/clstr_rev.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_sort_by -> ../lib/cd-hit/clstr_sort_by.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_sort_prot_by -> ../lib/cd-hit/clstr_sort_prot_by.pl
lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/make_multi_seq -> ../lib/cd-hit/make_multi_seq.pl
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/cd-hit/
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-rwxr-xr-x root/root 113344 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit
-rwxr-xr-x root/root 113344 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-2d
-rwxr-xr-x root/root 12596 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-2d-para.pl
-rwxr-xr-x root/root 113428 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-454
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-rwxr-xr-x root/root 113344 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-div
-rwxr-xr-x root/root 992 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-div.pl
-rwxr-xr-x root/root 113344 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-est
-rwxr-xr-x root/root 117440 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-est-2d
-rwxr-xr-x root/root 11859 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-para.pl
-rwxr-xr-x root/root 952 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2tree.pl
-rwxr-xr-x root/root 1209 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2txt.pl
-rwxr-xr-x root/root 4503 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2xml.pl
-rwxr-xr-x root/root 464 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_cut.pl
-rwxr-xr-x root/root 3258 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_list.pl
-rwxr-xr-x root/root 1129 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_list_sort.pl
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-rwxr-xr-x root/root 3465 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_quality_eval.pl
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-rwxr-xr-x root/root 1000 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_reduce.pl
-rwxr-xr-x root/root 196 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_renumber.pl
-rwxr-xr-x root/root 554 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_rep.pl
-rwxr-xr-x root/root 1160 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_reps_faa_rev.pl
-rwxr-xr-x root/root 1620 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_rev.pl
-rwxr-xr-x root/root 387 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_select.pl
-rwxr-xr-x root/root 555 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_select_rep.pl
-rwxr-xr-x root/root 779 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_size_histogram.pl
-rwxr-xr-x root/root 725 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_size_stat.pl
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-rwxr-xr-x root/root 2928 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sql_tbl.pl
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-rwxr-xr-x root/root 2190 2021-08-20 08:39 ./usr/lib/cd-hit/plot_len1.pl
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc-base/
-rw-r--r-- root/root 753 2021-08-10 20:30 ./usr/share/doc-base/cd-hit
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit/
-rw-r--r-- root/root 771 2021-08-10 20:30 ./usr/share/doc/cd-hit/README.Debian
-rw-r--r-- root/root 421458 2019-02-28 20:13 ./usr/share/doc/cd-hit/cdhit-user-guide.pdf
-rw-r--r-- root/root 2516 2021-08-20 08:39 ./usr/share/doc/cd-hit/changelog.Debian.gz
-rw-r--r-- root/root 962 2019-02-28 20:13 ./usr/share/doc/cd-hit/changelog.gz
-rw-r--r-- root/root 1151 2021-08-20 08:39 ./usr/share/doc/cd-hit/copyright
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit/examples/
-rw-r--r-- root/root 2269 2021-08-10 20:30 ./usr/share/doc/cd-hit/examples/example.fa
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/man/
drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/man/man1/
-rw-r--r-- root/root 1145 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-2d-para.1.gz
-rw-r--r-- root/root 1698 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-2d.1.gz
-rw-r--r-- root/root 1347 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-454.1.gz
-rw-r--r-- root/root 226 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-div.1.gz
-rw-r--r-- root/root 2175 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-est-2d.1.gz
-rw-r--r-- root/root 2199 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-est.1.gz
-rw-r--r-- root/root 1109 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-para.1.gz
-rw-r--r-- root/root 1779 2021-08-20 08:39 ./usr/share/man/man1/cd-hit.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 18504
Build-Time: 137
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 230
Job: cd-hit_4.8.1-4
Machine Architecture: armhf
Package: cd-hit
Package-Time: 422
Source-Version: 4.8.1-4
Space: 18504
Status: successful
Version: 4.8.1-4
--------------------------------------------------------------------------------
Finished at 2021-08-23T04:31:09Z
Build needed 00:07:02, 18504k disc space