cd-hit →
4.6.8-1 →
armhf → 2017-07-06 06:05:04
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd.raspbian.org
+==============================================================================+
| cd-hit 4.6.8-1 (armhf) Thu, 06 Jul 2017 05:54:07 +0000 |
+==============================================================================+
Package: cd-hit
Version: 4.6.8-1
Source Version: 4.6.8-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-7a11440d-e11d-4793-9ed8-fe893d6d57c6' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [9995 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [11.9 MB]
Fetched 21.9 MB in 27s (794 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'cd-hit' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/cd-hit.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/cd-hit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 942 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main cd-hit 4.6.8-1 (dsc) [1623 B]
Get:2 http://172.17.0.1/private buster-staging/main cd-hit 4.6.8-1 (tar) [933 kB]
Get:3 http://172.17.0.1/private buster-staging/main cd-hit 4.6.8-1 (diff) [7476 B]
Fetched 942 kB in 0s (1675 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/cd-hit-3e9a28/cd-hit-4.6.8' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/cd-hit-3e9a28' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-JDsM2G/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-JDsM2G/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-JDsM2G/gpg/trustdb.gpg: trustdb created
gpg: key 5FBC947B34E39F26: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 5FBC947B34E39F26: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 5FBC947B34E39F26: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (3016 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 13 not upgraded.
Need to get 776 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [776 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 776 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12681 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9), help2man
Filtered Build-Depends: debhelper (>= 9), help2man
dpkg-deb: building package 'sbuild-build-depends-cd-hit-dummy' in '/<<BUILDDIR>>/resolver-JDsM2G/apt_archive/sbuild-build-depends-cd-hit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-cd-hit-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Sources [489 B]
Get:5 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ Packages [573 B]
Fetched 2395 B in 0s (3402 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install cd-hit build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf sbuild-build-depends-cd-hit-dummy
0 upgraded, 33 newly installed, 0 to remove and 13 not upgraded.
Need to get 19.4 MB of archives.
After this operation, 65.4 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-JDsM2G/apt_archive ./ sbuild-build-depends-cd-hit-dummy 0.invalid.0 [782 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.5-1 [95.0 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.12+nmu1 [178 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.30-1 [222 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.30-1 [105 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.30-1 [63.4 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-2 [116 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-6 [7427 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2.2 [806 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-1 [735 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-2 [433 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.035-2 [17.0 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.035-2 [10.7 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libffi6 armhf 3.2.1-6 [18.7 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.52.3-1 [2576 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.11-3 [131 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-2 [1434 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.2.5 [961 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf help2man armhf 1.47.4 [162 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 19.4 MB in 5s (3491 kB/s)
Selecting previously unselected package groff-base.
(Reading database ... 12681 files and directories currently installed.)
Preparing to unpack .../00-groff-base_1.22.3-9_armhf.deb ...
Unpacking groff-base (1.22.3-9) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../01-libbsd0_0.8.5-1_armhf.deb ...
Unpacking libbsd0:armhf (0.8.5-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../02-bsdmainutils_9.0.12+nmu1_armhf.deb ...
Unpacking bsdmainutils (9.0.12+nmu1) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../03-libpipeline1_1.4.1-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.4.1-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../04-man-db_2.7.6.1-2_armhf.deb ...
Unpacking man-db (2.7.6.1-2) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../05-libmagic-mgc_1%3a5.30-1_armhf.deb ...
Unpacking libmagic-mgc (1:5.30-1) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../06-libmagic1_1%3a5.30-1_armhf.deb ...
Unpacking libmagic1:armhf (1:5.30-1) ...
Selecting previously unselected package file.
Preparing to unpack .../07-file_1%3a5.30-1_armhf.deb ...
Unpacking file (1:5.30-1) ...
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Preparing to unpack .../08-gettext-base_0.19.8.1-2_armhf.deb ...
Unpacking gettext-base (0.19.8.1-2) ...
Selecting previously unselected package libicu57:armhf.
Preparing to unpack .../09-libicu57_57.1-6_armhf.deb ...
Unpacking libicu57:armhf (57.1-6) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../10-libxml2_2.9.4+dfsg1-2.2_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-2.2) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../11-libsigsegv2_2.10-5_armhf.deb ...
Unpacking libsigsegv2:armhf (2.10-5) ...
Selecting previously unselected package m4.
Preparing to unpack .../12-m4_1.4.18-1_armhf.deb ...
Unpacking m4 (1.4.18-1) ...
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Preparing to unpack .../13-autoconf_2.69-10_all.deb ...
Unpacking autoconf (2.69-10) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../14-autotools-dev_20161112.1_all.deb ...
Unpacking autotools-dev (20161112.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../15-automake_1%3a1.15.1-1_all.deb ...
Unpacking automake (1:1.15.1-1) ...
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Preparing to unpack .../16-autopoint_0.19.8.1-2_all.deb ...
Unpacking autopoint (0.19.8.1-2) ...
Selecting previously unselected package libtool.
Preparing to unpack .../17-libtool_2.4.6-2_all.deb ...
Unpacking libtool (2.4.6-2) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../18-dh-autoreconf_14_all.deb ...
Unpacking dh-autoreconf (14) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../19-libarchive-zip-perl_1.59-1_all.deb ...
Unpacking libarchive-zip-perl (1.59-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../20-libfile-stripnondeterminism-perl_0.035-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.035-2) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../21-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
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Preparing to unpack .../22-dh-strip-nondeterminism_0.035-2_all.deb ...
Unpacking dh-strip-nondeterminism (0.035-2) ...
Selecting previously unselected package libffi6:armhf.
Preparing to unpack .../23-libffi6_3.2.1-6_armhf.deb ...
Unpacking libffi6:armhf (3.2.1-6) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../24-libglib2.0-0_2.52.3-1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.52.3-1) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../25-libcroco3_0.6.11-3_armhf.deb ...
Unpacking libcroco3:armhf (0.6.11-3) ...
Selecting previously unselected package libunistring0:armhf.
Preparing to unpack .../26-libunistring0_0.9.6+really0.9.3-0.1_armhf.deb ...
Unpacking libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../27-gettext_0.19.8.1-2_armhf.deb ...
Unpacking gettext (0.19.8.1-2) ...
Selecting previously unselected package intltool-debian.
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Unpacking intltool-debian (0.35.0+20060710.4) ...
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Unpacking po-debconf (1.0.20) ...
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Unpacking debhelper (10.2.5) ...
Selecting previously unselected package help2man.
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Unpacking help2man (1.47.4) ...
Selecting previously unselected package sbuild-build-depends-cd-hit-dummy.
Preparing to unpack .../32-sbuild-build-depends-cd-hit-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-cd-hit-dummy (0.invalid.0) ...
Setting up libarchive-zip-perl (1.59-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up groff-base (1.22.3-9) ...
Setting up gettext-base (0.19.8.1-2) ...
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-6) ...
Setting up libbsd0:armhf (0.8.5-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-2.2) ...
Setting up libmagic-mgc (1:5.30-1) ...
Setting up libmagic1:armhf (1:5.30-1) ...
Processing triggers for libc-bin (2.24-12) ...
Setting up autotools-dev (20161112.1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up help2man (1.47.4) ...
Setting up libffi6:armhf (3.2.1-6) ...
Setting up bsdmainutils (9.0.12+nmu1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-2) ...
Setting up libfile-stripnondeterminism-perl (0.035-2) ...
Setting up libglib2.0-0:armhf (2.52.3-1) ...
No schema files found: doing nothing.
Setting up autoconf (2.69-10) ...
Setting up file (1:5.30-1) ...
Setting up libcroco3:armhf (0.6.11-3) ...
Setting up automake (1:1.15.1-1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2) ...
Setting up gettext (0.19.8.1-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.20) ...
Setting up dh-autoreconf (14) ...
Setting up dh-strip-nondeterminism (0.035-2) ...
Setting up debhelper (10.2.5) ...
Setting up sbuild-build-depends-cd-hit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-12) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.28-6 dpkg-dev_1.18.24 g++-6_6.3.0-18+rpi1 gcc-6_6.3.0-18+rpi1 libc6-dev_2.24-12 libstdc++-6-dev_6.3.0-18+rpi1 libstdc++6_6.3.0-18+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4.6 autoconf_2.69-10 automake_1:1.15.1-1 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_9.9+rpi1 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-6 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1 build-essential_12.3 bzip2_1.0.6-8.1 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:6.3.0-4 cpp-6_6.3.0-18+rpi1 dash_0.5.8-2.4 debconf_1.5.61 debhelper_10.2.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-strip-nondeterminism_0.035-2 diffutils_1:3.5-3 dmsetup_2:1.02.137-2 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 fakeroot_1.21-3.1 file_1:5.30-1 findutils_4.6.0+git+20161106-2 g++_4:6.3.0-4 g++-6_6.3.0-18+rpi1 gcc_4:6.3.0-4 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-6_6.3.0-18+rpi1 gcc-6-base_6.3.0-18+rpi1 gettext_0.19.8.1-2 gettext-base_0.19.8.1-2 gnupg_2.1.18-8 gnupg-agent_2.1.18-8 gpgv_2.1.18-8 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5 help2man_1.47.4 hostname_3.18 init-system-helpers_1.48 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libapparmor1_2.11.0-3 libapt-pkg5.0_1.4.6 libarchive-zip-perl_1.59-1 libasan3_6.3.0-18+rpi1 libassuan0_2.4.3-2 libatomic1_6.3.0-18+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1 libblkid1_2.29.2-1 libbsd0_0.8.5-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12 libc-dev-bin_2.24-12 libc6_2.24-12 libc6-dev_2.24-12 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_6.3.0-18+rpi1 libcomerr2_1.43.4-2 libcroco3_0.6.11-3 libcryptsetup4_2:1.7.3-4 libdb5.3_5.3.28-12 libdbus-1-3_1.10.18-1 libdebconfclient0_0.228 libdevmapper1.02.1_2:1.02.137-2 libdpkg-perl_1.18.24 libdrm2_2.4.74-1 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.035-2 libgcc-6-dev_6.3.0-18+rpi1 libgcc1_1:6.3.0-18+rpi1 libgcrypt20_1.7.7-2 libgdbm3_1.8.3-14 libglib2.0-0_2.52.3-1 libgmp10_2:6.1.2+dfsg-1 libgomp1_6.3.0-18+rpi1 libgpg-error0_1.26-2 libicu57_57.1-6 libidn11_1.33-1 libip4tc0_1.6.0+snapshot20161117-6 libisl15_0.18-1 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libksba8_1.3.5-2 liblocale-gettext-perl_1.07-3+b1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.29.2-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.3-1 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-3 libperl5.24_5.24.1-4 libpipeline1_1.4.1-2 libplymouth4_0.9.2-4 libpng16-16_1.6.29-3 libprocps6_2:3.3.12-3 libreadline7_7.0-3 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-2 libsemanage1_2.6-2 libsepol1_2.6-2 libsigsegv2_2.10-5 libsmartcols1_2.29.2-1 libsqlite3-0_3.16.2-5 libss2_1.43.4-2 libstdc++-6-dev_6.3.0-18+rpi1 libstdc++6_6.3.0-18+rpi1 libsystemd0_233-9 libtext-charwidth-perl_0.04-7+b7 libtext-iconv-perl_1.7-5+b8 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20161126-1 libtool_2.4.6-2 libubsan0_6.3.0-18+rpi1 libudev1_233-9 libunistring0_0.9.6+really0.9.3-0.1 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1 libxml2_2.9.4+dfsg1-2.2 linux-base_4.5 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.4-4.1 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mount_2.29.2-1 mountall_2.54 multiarch-support_2.24-12 ncurses-base_6.0+20161126-1 ncurses-bin_6.0+20161126-1 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.24.1-4 perl-base_5.24.1-4 perl-modules-5.24_5.24.1-4 pinentry-curses_1.0.0-2 plymouth_0.9.2-4 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-cd-hit-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 systemd_233-9 sysvinit-utils_2.88dsf-59.9 tar_1.29b-1.1 tzdata_2017b-2 udev_233-9 util-linux_2.29.2-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sat Jul 1 09:08:37 2017 UTC
gpgv: using RSA key 8451F9178172E7E2DC73F79551F84A8FECCA7E09
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./cd-hit_4.6.8-1.dsc
dpkg-source: info: extracting cd-hit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking cd-hit_4.6.8.orig.tar.gz
dpkg-source: info: unpacking cd-hit_4.6.8-1.debian.tar.xz
dpkg-source: info: applying enable_help2man.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-7a11440d-e11d-4793-9ed8-fe893d6d57c6
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package cd-hit
dpkg-buildpackage: info: source version 4.6.8-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build cd-hit-4.6.8
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
make -j1 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f *.o cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_update_autotools_config -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- openmp=yes
make -j1 openmp=yes
make[2]: Entering directory '/<<PKGBUILDDIR>>'
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-common.c++ -c
cdhit-common.c++:322:16: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
strcpy( date, __DATE__ );
^~~~~~~~
cdhit-common.c++:326:66: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
printf( "Program: CD-HIT, V" CDHIT_VERSION WITH_OPENMP ", %s, " __TIME__ "\n", date );
^~~~~~~~
cdhit-common.c++: In member function 'void SequenceDB::DoClustering(const Options&)':
cdhit-common.c++:3363:66: warning: format '%li' expects argument of type 'long int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
printf( "\nApprixmated maximum memory consumption: %liM\n", mem );
^
In file included from /usr/include/c++/6/algorithm:62:0,
from /usr/include/c++/6/valarray:38,
from cdhit-common.h:38,
from cdhit-common.c++:28:
/usr/include/c++/6/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_algo.h:1837:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algo.h:1837:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_algo.h:1877:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
__final_insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algo.h:1877:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h:1877:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h:1882:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h:1887:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_algo.h:1837:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algo.h:1837:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_algo.h:1877:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
__final_insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algo.h:1877:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h:1877:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h:1882:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h:1887:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
^~~
In file included from /usr/include/c++/6/bits/stl_algo.h:61:0,
from /usr/include/c++/6/algorithm:62,
from /usr/include/c++/6/valarray:38,
from cdhit-common.h:38,
from cdhit-common.c++:28:
/usr/include/c++/6/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_heap.h:209:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/6/algorithm:62:0,
from /usr/include/c++/6/valarray:38,
from cdhit-common.h:38,
from cdhit-common.c++:28:
/usr/include/c++/6/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_algo.h:1937:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algo.h:1937:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h:1951:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h: In member function 'void SequenceDB::WriteClusters(const char*, const char*, const char*, const char*, const Options&)':
/usr/include/c++/6/bits/stl_algo.h:1965:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__introsort_loop(__first, __last,
^~~
/usr/include/c++/6/bits/stl_algo.h:1968:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__final_insertion_sort(__first, __last, __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h: In member function 'void SequenceDB::WriteClusters(const char*, const char*, const Options&)':
/usr/include/c++/6/bits/stl_algo.h:1965:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__introsort_loop(__first, __last,
^~~
/usr/include/c++/6/bits/stl_algo.h:1968:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' will change in GCC 7.1
std::__final_insertion_sort(__first, __last, __comp);
^~~
In file included from /usr/include/c++/6/bits/stl_algo.h:61:0,
from /usr/include/c++/6/algorithm:62,
from /usr/include/c++/6/valarray:38,
from cdhit-common.h:38,
from cdhit-common.c++:28:
/usr/include/c++/6/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_heap.h:209:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/6/algorithm:62:0,
from /usr/include/c++/6/valarray:38,
from cdhit-common.h:38,
from cdhit-common.c++:28:
/usr/include/c++/6/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/6/bits/stl_algo.h:1937:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algo.h:1937:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algo.h:1951:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h: In member function 'void SequenceDB::WriteExtra1D(const Options&)':
/usr/include/c++/6/bits/stl_algo.h:1965:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__introsort_loop(__first, __last,
^~~
/usr/include/c++/6/bits/stl_algo.h:1968:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__final_insertion_sort(__first, __last, __comp);
^~~
/usr/include/c++/6/bits/stl_algo.h: In member function 'void SequenceDB::WriteExtra2D(SequenceDB&, const Options&)':
/usr/include/c++/6/bits/stl_algo.h:1965:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__introsort_loop(__first, __last,
^~~
/usr/include/c++/6/bits/stl_algo.h:1968:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' will change in GCC 7.1
std::__final_insertion_sort(__first, __last, __comp);
^~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-utility.c++ -c
cdhit-utility.c++:9:79: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
char cd_hit_ver[] = "\t\t====== CD-HIT version " CDHIT_VERSION " (built on " __DATE__ ") ======";
^~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -o cd-hit
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -o cd-hit-est
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -o cd-hit-2d
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -o cd-hit-est-2d
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -o cd-hit-div
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -o cd-hit-454
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
dh_installdirs -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -- PREFIX=debian/cd-hit/usr/lib/cd-hit
make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/cd-hit AM_UPDATE_INFO_DIR=no PREFIX=debian/cd-hit/usr/lib/cd-hit
make[2]: Entering directory '/<<PKGBUILDDIR>>'
for prog in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454; do \
install -m 0755 $prog debian/cd-hit/usr/lib/cd-hit; \
done
install -m 0755 *.pl debian/cd-hit/usr/lib/cd-hit;
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1/
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='quickly group sequences' \
/<<PKGBUILDDIR>>/cd-hit > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='quickly group sequences, optimised for 454 data' \
/<<PKGBUILDDIR>>/cd-hit-454 > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-454.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='quickly group sequences in db1 or db2 format' \
/<<PKGBUILDDIR>>/cd-hit-2d > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-2d.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='run CD-HIT algorithm on RNA/DNA sequences' \
/<<PKGBUILDDIR>>/cd-hit-est > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-est.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='run CD-HIT algorithm on RNA/DNA sequences in db1 or db2 format' \
/<<PKGBUILDDIR>>/cd-hit-est-2d > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-est-2d.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='divide a big clustering job into pieces to run cd-hit-2d or cd-hit-est-2d jobs' \
/<<PKGBUILDDIR>>/cd-hit-2d-para.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-2d-para.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='divide a big clustering job into pieces to run cd-hit or cd-hit-est jobs' \
/<<PKGBUILDDIR>>/cd-hit-para.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-para.1
help2man --no-info --no-discard-stderr --version-string='4.6.8' \
--name='divide a FASTA file into pieces' \
/<<PKGBUILDDIR>>/cd-hit-div.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-div.1
# psi-cd-hit.pl is throwing some errors which are fixed using sed
# ... at least in versions <= 4.6.4 - now help2man does not work at all
#help2man --no-info --no-discard-stderr --version-string='4.6.8' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities' \
# /<<PKGBUILDDIR>>/psi-cd-hit.pl | \
# sed -e '/^Name "main::.*" used only once:/d' \
# > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit.1
# help2man does not work at all since version 4.6.4
#help2man --no-info --no-discard-stderr --version-string='4.6.8' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \
# /<<PKGBUILDDIR>>/psi-cd-hit-2d.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d.1
# FIXME: what is the difference between psi-cd-hit-2d.pl and psi-cd-hit-2d-g1.pl ?
# help2man does not work at all since version 4.6.4
#help2man --no-info --no-discard-stderr --version-string='4.6.8' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \
# /<<PKGBUILDDIR>>/psi-cd-hit-2d-g1.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d-g1.1
# No help output from
# clstr2tree.pl
# clstr_merge.pl
# clstr_merge_noorder.pl
# clstr_reduce.pl
# clstr_renumber.pl
# clstr_rev.pl
# clstr_sort_by.pl
# clstr_sort_prot_by
# make_multi_seq
# psi-cd-hit-local.pl -> even throws several "used only once: possible typo" errors
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-div contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-2d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-454 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-est contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cd-hit/usr/lib/cd-hit/cd-hit debian/cd-hit/usr/lib/cd-hit/cd-hit-div debian/cd-hit/usr/lib/cd-hit/cd-hit-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-454 debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-est were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cd-hit/usr/lib/cd-hit/cd-hit debian/cd-hit/usr/lib/cd-hit/cd-hit-div debian/cd-hit/usr/lib/cd-hit/cd-hit-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-454 debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-est were not linked against libpthread.so.0 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'cd-hit-dbgsym' in '../cd-hit-dbgsym_4.6.8-1_armhf.deb'.
dpkg-deb: building package 'cd-hit' in '../cd-hit_4.6.8-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../cd-hit_4.6.8-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build cd-hit-4.6.8
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-07-06T06:04:10Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
cd-hit_4.6.8-1_armhf.changes:
-----------------------------
Format: 1.8
Date: Sat, 01 Jul 2017 10:43:07 +0200
Source: cd-hit
Binary: cd-hit
Architecture: armhf
Version: 4.6.8-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
cd-hit - suite of programs designed to quickly group sequences
Closes: 866330
Changes:
cd-hit (4.6.8-1) unstable; urgency=medium
.
* Team upload.
* New upstream release.
* Make build reproducible, thanks to Chris Lamb for the patch.
Closes: #866330
Checksums-Sha1:
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dd7a4597c925d89a838f2de2fb10801ecdee13ab 4453 cd-hit_4.6.8-1_armhf.buildinfo
d3a3d42bde79a688731e410cbafc0c3849748773 491458 cd-hit_4.6.8-1_armhf.deb
Checksums-Sha256:
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e7b21edeadce221594d0b3e3c2f437299a2c0ffc983c8dfddb4c51743140819a 4453 cd-hit_4.6.8-1_armhf.buildinfo
9a7b20ff36c8dd6e3050af07018e2c5b694590e4bc6104ba96e3ee080d7ecd85 491458 cd-hit_4.6.8-1_armhf.deb
Files:
fb10cc732f479c27987343fe1f46e7ee 1801936 debug extra cd-hit-dbgsym_4.6.8-1_armhf.deb
a0bf213f1fad022c47ba719041dc8dfe 4453 science optional cd-hit_4.6.8-1_armhf.buildinfo
ff12fe3442401dd5685da944497fb8a8 491458 science optional cd-hit_4.6.8-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
cd-hit-dbgsym_4.6.8-1_armhf.deb
-------------------------------
new debian package, version 2.0.
size 1801936 bytes: control archive=771 bytes.
616 bytes, 13 lines control
636 bytes, 6 lines md5sums
Package: cd-hit-dbgsym
Source: cd-hit
Version: 4.6.8-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1961
Depends: cd-hit (= 4.6.8-1)
Section: debug
Priority: extra
Homepage: http://weizhong-lab.ucsd.edu/cd-hit/
Description: Debug symbols for cd-hit
Build-Ids: 1bd1c9fccc409c99bfbc39212c84ab1d9f1a4caa 330b3be453d66e54d07689465a5c8b8a5b671edf 399d8051f420763f08ec7c292aa37f218e0bcf1f 6b73b89e2f42bd3a569351c2320da9805fc2c96a df7e366b34f578de179c87228071107aa25ba312 e0efbc2889b36bcab713dbc6d65b3887b5bee709
drwxr-xr-x root/root 0 2017-07-01 08:43 ./
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/1b/
-rw-r--r-- root/root 330836 2017-07-01 08:43 ./usr/lib/debug/.build-id/1b/d1c9fccc409c99bfbc39212c84ab1d9f1a4caa.debug
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/33/
-rw-r--r-- root/root 330188 2017-07-01 08:43 ./usr/lib/debug/.build-id/33/0b3be453d66e54d07689465a5c8b8a5b671edf.debug
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/39/
-rw-r--r-- root/root 330372 2017-07-01 08:43 ./usr/lib/debug/.build-id/39/9d8051f420763f08ec7c292aa37f218e0bcf1f.debug
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/6b/
-rw-r--r-- root/root 334552 2017-07-01 08:43 ./usr/lib/debug/.build-id/6b/73b89e2f42bd3a569351c2320da9805fc2c96a.debug
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/df/
-rw-r--r-- root/root 330256 2017-07-01 08:43 ./usr/lib/debug/.build-id/df/7e366b34f578de179c87228071107aa25ba312.debug
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/debug/.build-id/e0/
-rw-r--r-- root/root 333580 2017-07-01 08:43 ./usr/lib/debug/.build-id/e0/efbc2889b36bcab713dbc6d65b3887b5bee709.debug
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/share/doc/cd-hit-dbgsym -> cd-hit
cd-hit_4.6.8-1_armhf.deb
------------------------
new debian package, version 2.0.
size 491458 bytes: control archive=2101 bytes.
898 bytes, 17 lines control
3382 bytes, 51 lines md5sums
Package: cd-hit
Version: 4.6.8-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1227
Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), perl:any
Section: science
Priority: optional
Homepage: http://weizhong-lab.ucsd.edu/cd-hit/
Description: suite of programs designed to quickly group sequences
cd-hit contains a number of programs designed to quickly group
sequences. cd-hit groups proteins into clusters that meet a user-defined
similarity threshold. cd-hit-est is similar to cd-hit, but designed to
group nucleotide sequences (without introns). cd-hit-est-2d is similar
to cd-hit-2d but designed to compare two nucleotide datasets. A number
of other related programs are also in this package. Please see the
cd-hit user manual, also part of this package, for further information.
drwxr-xr-x root/root 0 2017-07-01 08:43 ./
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/bin/
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit -> ../lib/cd-hit/cd-hit
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-2d -> ../lib/cd-hit/cd-hit-2d
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-2d-para -> ../lib/cd-hit/cd-hit-2d-para.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-454 -> ../lib/cd-hit/cd-hit-454
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-div -> ../lib/cd-hit/cd-hit-div.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-est -> ../lib/cd-hit/cd-hit-est
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-est-2d -> ../lib/cd-hit/cd-hit-est-2d
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cd-hit-para -> ../lib/cd-hit/cd-hit-para.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cdhit -> cd-hit
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cdhit-2d -> cd-hit-2d
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cdhit-454 -> cd-hit-454
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cdhit-est -> cd-hit-est
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/cdhit-est-2d -> cd-hit-est-2d
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr2tree -> ../lib/cd-hit/clstr2tree.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_merge -> ../lib/cd-hit/clstr_merge.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_merge_noorder -> ../lib/cd-hit/clstr_merge_noorder.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_reduce -> ../lib/cd-hit/clstr_reduce.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_renumber -> ../lib/cd-hit/clstr_renumber.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_rev -> ../lib/cd-hit/clstr_rev.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_sort_by -> ../lib/cd-hit/clstr_sort_by.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/clstr_sort_prot_by -> ../lib/cd-hit/clstr_sort_prot_by.pl
lrwxrwxrwx root/root 0 2017-07-01 08:43 ./usr/bin/make_multi_seq -> ../lib/cd-hit/make_multi_seq.pl
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/lib/cd-hit/
-rwxr-xr-x root/root 3152 2017-07-01 08:43 ./usr/lib/cd-hit/FET.pl
-rwxr-xr-x root/root 113032 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit
-rwxr-xr-x root/root 113032 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-2d
-rwxr-xr-x root/root 12596 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-2d-para.pl
-rwxr-xr-x root/root 113116 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-454
-rwxr-xr-x root/root 113032 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-div
-rwxr-xr-x root/root 992 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-div.pl
-rwxr-xr-x root/root 113032 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-est
-rwxr-xr-x root/root 113032 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-est-2d
-rwxr-xr-x root/root 11859 2017-07-01 08:43 ./usr/lib/cd-hit/cd-hit-para.pl
-rwxr-xr-x root/root 952 2017-07-01 08:43 ./usr/lib/cd-hit/clstr2tree.pl
-rwxr-xr-x root/root 1209 2017-07-01 08:43 ./usr/lib/cd-hit/clstr2txt.pl
-rwxr-xr-x root/root 4503 2017-07-01 08:43 ./usr/lib/cd-hit/clstr2xml.pl
-rwxr-xr-x root/root 464 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_cut.pl
-rwxr-xr-x root/root 3258 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_list.pl
-rwxr-xr-x root/root 1129 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_list_sort.pl
-rwxr-xr-x root/root 3199 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_merge.pl
-rwxr-xr-x root/root 2162 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_merge_noorder.pl
-rwxr-xr-x root/root 3465 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_quality_eval.pl
-rwxr-xr-x root/root 2335 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_quality_eval_by_link.pl
-rwxr-xr-x root/root 1000 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_reduce.pl
-rwxr-xr-x root/root 196 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_renumber.pl
-rwxr-xr-x root/root 554 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_rep.pl
-rwxr-xr-x root/root 1160 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_reps_faa_rev.pl
-rwxr-xr-x root/root 1620 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_rev.pl
-rwxr-xr-x root/root 387 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_select.pl
-rwxr-xr-x root/root 555 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_select_rep.pl
-rwxr-xr-x root/root 779 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_size_histogram.pl
-rwxr-xr-x root/root 725 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_size_stat.pl
-rwxr-xr-x root/root 806 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_sort_by.pl
-rwxr-xr-x root/root 1291 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_sort_prot_by.pl
-rwxr-xr-x root/root 2928 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_sql_tbl.pl
-rwxr-xr-x root/root 1103 2017-07-01 08:43 ./usr/lib/cd-hit/clstr_sql_tbl_sort.pl
-rwxr-xr-x root/root 1670 2017-07-01 08:43 ./usr/lib/cd-hit/make_multi_seq.pl
-rwxr-xr-x root/root 3668 2017-07-01 08:43 ./usr/lib/cd-hit/plot_2d.pl
-rwxr-xr-x root/root 2190 2017-07-01 08:43 ./usr/lib/cd-hit/plot_len1.pl
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/doc-base/
-rw-r--r-- root/root 753 2017-07-01 08:36 ./usr/share/doc-base/cd-hit
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/doc/cd-hit/
-rw-r--r-- root/root 771 2017-07-01 08:36 ./usr/share/doc/cd-hit/README.Debian
-rw-r--r-- root/root 421458 2017-06-21 22:33 ./usr/share/doc/cd-hit/cdhit-user-guide.pdf
-rw-r--r-- root/root 1957 2017-07-01 08:43 ./usr/share/doc/cd-hit/changelog.Debian.gz
-rw-r--r-- root/root 962 2017-06-21 22:33 ./usr/share/doc/cd-hit/changelog.gz
-rw-r--r-- root/root 1150 2017-07-01 08:36 ./usr/share/doc/cd-hit/copyright
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/doc/cd-hit/examples/
-rw-r--r-- root/root 2269 2017-07-01 08:36 ./usr/share/doc/cd-hit/examples/example.fa
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/man/
drwxr-xr-x root/root 0 2017-07-01 08:43 ./usr/share/man/man1/
-rw-r--r-- root/root 1147 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-2d-para.1.gz
-rw-r--r-- root/root 1681 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-2d.1.gz
-rw-r--r-- root/root 1329 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-454.1.gz
-rw-r--r-- root/root 229 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-div.1.gz
-rw-r--r-- root/root 2148 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-est-2d.1.gz
-rw-r--r-- root/root 2158 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-est.1.gz
-rw-r--r-- root/root 1110 2017-07-01 08:43 ./usr/share/man/man1/cd-hit-para.1.gz
-rw-r--r-- root/root 1737 2017-07-01 08:43 ./usr/share/man/man1/cd-hit.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 16072
Build-Time: 171
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 382
Job: cd-hit_4.6.8-1
Machine Architecture: armhf
Package: cd-hit
Package-Time: 603
Source-Version: 4.6.8-1
Space: 16072
Status: successful
Version: 4.6.8-1
--------------------------------------------------------------------------------
Finished at 2017-07-06T06:04:10Z
Build needed 00:10:03, 16072k disc space