cd-hit →
4.6.6-2 →
armhf → 2016-08-20 10:34:31
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on testwandboard
+==============================================================================+
| cd-hit 4.6.6-2 (armhf) 20 Aug 2016 10:27 |
+==============================================================================+
Package: cd-hit
Version: 4.6.6-2
Source Version: 4.6.6-2
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/cd-hit-GRyhQz/cd-hit-4.6.6' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/cd-hit-GRyhQz' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-17e83980-249f-488f-828d-5cd821d1033f' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9234 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.2 MB]
Fetched 20.4 MB in 25s (795 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'cd-hit' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/cd-hit.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/cd-hit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1158 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main cd-hit 4.6.6-2 (dsc) [1957 B]
Get:2 http://172.17.0.1/private stretch-staging/main cd-hit 4.6.6-2 (tar) [1149 kB]
Get:3 http://172.17.0.1/private stretch-staging/main cd-hit 4.6.6-2 (diff) [6896 B]
Fetched 1158 kB in 0s (1999 kB/s)
Download complete and in download only mode
Check architectures
-------------------
Check dependencies
------------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-hTcMuA/apt_archive/sbuild-build-depends-core-dummy.deb'.
Warning: apt-key output should not be parsed (stdout is not a terminal)
OK
Get:1 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ Sources [194 B]
Get:5 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ Packages [508 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-hTcMuA/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...
+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 3 not upgraded.
Need to get 0 B/764 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-hTcMuA/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [764 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: debhelper (>= 9), help2man
Filtered Build-Depends: debhelper (>= 9), help2man
dpkg-deb: building package 'sbuild-build-depends-cd-hit-dummy' in '/<<BUILDDIR>>/resolver-zhYGb3/apt_archive/sbuild-build-depends-cd-hit-dummy.deb'.
Warning: apt-key output should not be parsed (stdout is not a terminal)
OK
Get:1 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ Sources [194 B]
Get:5 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ Packages [511 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-zhYGb3/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...
+------------------------------------------------------------------------------+
| Install cd-hit build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3 libffi6
libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libunistring0
libxml2 m4 man-db po-debconf sbuild-build-depends-cd-hit-dummy
0 upgraded, 33 newly installed, 0 to remove and 3 not upgraded.
Need to get 18.9 MB/18.9 MB of archives.
After this operation, 64.5 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-zhYGb3/apt_archive ./ sbuild-build-depends-cd-hit-dummy 0.invalid.0 [774 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-8 [1087 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.10 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.28-4 [210 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.28-4 [104 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.28-4 [62.7 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libicu57 armhf 57.1-2 [7404 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-1+b1 [803 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20160430.1 [72.6 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.48.1-2 [2546 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.022-1 [13.1 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.022-1 [7902 B]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160814 [800 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf help2man armhf 1.47.4 [162 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Unpacking sbuild-build-depends-cd-hit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.23-4) ...
Setting up libarchive-zip-perl (1.59-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up groff-base (1.22.3-8) ...
Setting up gettext-base (0.19.8.1-1) ...
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up m4 (1.4.17-5) ...
Setting up libicu57:armhf (57.1-2) ...
Setting up libbsd0:armhf (0.8.3-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-1+b1) ...
Setting up libmagic-mgc (1:5.28-4) ...
Setting up libmagic1:armhf (1:5.28-4) ...
Setting up autotools-dev (20160430.1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up help2man (1.47.4) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up bsdmainutils (9.0.10) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-1) ...
Setting up libfile-stripnondeterminism-perl (0.022-1) ...
Setting up libglib2.0-0:armhf (2.48.1-2) ...
No schema files found: doing nothing.
Setting up autoconf (2.69-10) ...
Setting up file (1:5.28-4) ...
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up automake (1:1.15-4) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-0.1) ...
Setting up gettext (0.19.8.1-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.19) ...
Setting up dh-autoreconf (12) ...
Setting up debhelper (9.20160814) ...
Setting up sbuild-build-depends-cd-hit-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (0.022-1) ...
Processing triggers for libc-bin (2.23-4) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.5.0-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26.1-1 dpkg-dev_1.18.10 g++-6_6.1.1-11+rpi1 gcc-6_6.1.1-11+rpi1 libc6-dev_2.23-4 libstdc++-6-dev_6.1.1-11+rpi1 libstdc++6_6.1.1-11+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.3~pre3 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.8.1-1 autotools-dev_20160430.1 base-files_9.6+rpi1 base-passwd_3.5.39 bash_4.3-15 binutils_2.26.1-1 bsdmainutils_9.0.10 bsdutils_1:2.28-6 build-essential_12.2 bzip2_1.0.6-8 console-setup_1.147 console-setup-linux_1.147 coreutils_8.25-2 cpio_2.11+dfsg-5 cpp_4:6.1.1-1 cpp-6_6.1.1-11+rpi1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_9.20160814 debianutils_4.8 dh-autoreconf_12 dh-strip-nondeterminism_0.022-1 diffutils_1:3.3-3 dmsetup_2:1.02.130-1 dpkg_1.18.10 dpkg-dev_1.18.10 e2fslibs_1.43.1-1 e2fsprogs_1.43.1-1 fakeroot_1.21-1 file_1:5.28-4 findutils_4.6.0+git+20160703-2 fuse2fs_1.43.1-1 g++_4:6.1.1-1 g++-6_6.1.1-11+rpi1 gcc_4:6.1.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.0-4 gcc-6_6.1.1-11+rpi1 gcc-6-base_6.1.1-11+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gnupg_1.4.20-6 gpgv_1.4.20-6 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-5 help2man_1.47.4 hostname_3.18 ifupdown_0.8.13 init_1.42 init-system-helpers_1.42 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 iproute2_4.6.0-1 kbd_2.0.3-2 keyboard-configuration_1.147 klibc-utils_2.0.4-9+rpi1 kmod_22-1.1 libacl1_2.2.52-3 libapparmor1_2.10.95-4 libapt-pkg5.0_1.3~pre3 libarchive-zip-perl_1.59-1 libasan3_6.1.1-11+rpi1 libatm1_1:2.5.1-1.6 libatomic1_6.1.1-11+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.5-1 libaudit1_1:2.6.5-1 libblkid1_2.28-6 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.23-4 libc-dev-bin_2.23-4 libc6_2.23-4 libc6-dev_2.23-4 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.1.1-11+rpi1 libcomerr2_1.43.1-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libdb5.3_5.3.28-12 libdbus-1-3_1.10.8-1 libdebconfclient0_0.215 libdevmapper1.02.1_2:1.02.130-1 libdpkg-perl_1.18.10 libdrm2_2.4.70-1 libfakeroot_1.21-1 libfdisk1_2.28-6 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.022-1 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.1.1-11+rpi1 libgcc1_1:6.1.1-11+rpi1 libgcrypt20_1.7.2-2 libgdbm3_1.8.3-14 libglib2.0-0_2.48.1-2 libgmp10_2:6.1.1+dfsg-1 libgomp1_6.1.1-11+rpi1 libgpg-error0_1.24-1 libicu57_57.1-2 libidn11_1.33-1 libisl15_0.17.1-1 libklibc_2.0.4-9+rpi1 libkmod2_22-1.1 liblocale-gettext-perl_1.07-3 liblz4-1_0.0~r131-2 liblzma5_5.1.1alpha+20120614-2.1 libmagic-mgc_1:5.28-4 libmagic1_1:5.28-4 libmount1_2.28-6 libmpc3_1.0.3-1 libmpfr4_3.1.4-2 libncurses5_6.0+20160625-1 libncursesw5_6.0+20160625-1 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpcre3_2:8.39-1 libperl5.22_5.22.2-3 libpipeline1_1.4.1-2 libplymouth4_0.9.2-3 libpng12-0_1.2.54-6 libprocps6_2:3.3.12-2 libreadline6_6.3-8+b3 libseccomp2_2.3.1-2 libselinux1_2.5-3 libsemanage-common_2.5-1 libsemanage1_2.5-1 libsepol1_2.5-1 libsigsegv2_2.10-5 libsmartcols1_2.28-6 libss2_1.43.1-1 libstdc++-6-dev_6.1.1-11+rpi1 libstdc++6_6.1.1-11+rpi1 libsystemd0_230-7+b1 libtext-charwidth-perl_0.04-7+b6 libtext-iconv-perl_1.7-5+b7 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1 libtool_2.4.6-0.1 libubsan0_6.1.1-11+rpi1 libudev1_230-7+b1 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-5 libuuid1_2.28-6 libxml2_2.9.4+dfsg1-1+b1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_9.20160629+rpi1 m4_1.4.17-5 make_4.1-9 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.07-1 mawk_1.3.3-17 mount_2.28-6 multiarch-support_2.23-4 ncurses-base_6.0+20160625-1 ncurses-bin_6.0+20160625-1 netbase_5.3 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.2-3 perl-base_5.22.2-3 perl-modules-5.22_5.22.2-3 po-debconf_1.0.19 procps_2:3.3.12-2 psmisc_22.21-2.1 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-cd-hit-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-7.1 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_230-7+b1 systemd-sysv_230-7+b1 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1 tzdata_2016f-1 udev_230-7+b1 util-linux_2.28-6 xkb-data_2.17-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Mon Aug 15 06:07:59 2016 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./cd-hit_4.6.6-2.dsc
dpkg-source: info: extracting cd-hit in cd-hit-4.6.6
dpkg-source: info: unpacking cd-hit_4.6.6.orig.tar.gz
dpkg-source: info: unpacking cd-hit_4.6.6-2.debian.tar.xz
dpkg-source: info: applying enable_help2man.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-17e83980-249f-488f-828d-5cd821d1033f
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package cd-hit
dpkg-buildpackage: info: source version 4.6.6-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build cd-hit-4.6.6
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
make -j1 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f *.o cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_update_autotools_config -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- openmp=yes
make -j1 openmp=yes
make[2]: Entering directory '/<<PKGBUILDDIR>>'
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-common.c++ -c
cdhit-common.c++:313:16: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
strcpy( date, __DATE__ );
^~~~~~~~
cdhit-common.c++:317:66: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
printf( "Program: CD-HIT, V" CDHIT_VERSION WITH_OPENMP ", %s, " __TIME__ "\n", date );
^~~~~~~~
cdhit-common.c++: In member function 'void SequenceDB::DoClustering(const Options&)':
cdhit-common.c++:3043:66: warning: format '%li' expects argument of type 'long int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
printf( "\nApprixmated maximum memory consumption: %liM\n", mem );
^
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-utility.c++ -c
cdhit-utility.c++:9:79: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
char cd_hit_ver[] = "\t\t====== CD-HIT version " CDHIT_VERSION " (built on " __DATE__ ") ======";
^~~~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit.o cdhit-common.o cdhit-utility.o -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cd-hit
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.o cdhit-common.o cdhit-utility.o -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cd-hit-est
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.o cdhit-common.o cdhit-utility.o -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cd-hit-2d
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.o cdhit-common.o cdhit-utility.o -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cd-hit-est-2d
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.o cdhit-common.o cdhit-utility.o -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cd-hit-div
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.c++ -c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.o cdhit-common.o cdhit-utility.o -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cd-hit-454
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_installdirs -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -- PREFIX=debian/cd-hit/usr/lib/cd-hit
make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/cd-hit AM_UPDATE_INFO_DIR=no PREFIX=debian/cd-hit/usr/lib/cd-hit
make[2]: Entering directory '/<<PKGBUILDDIR>>'
for prog in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454; do \
install -m 0755 $prog debian/cd-hit/usr/lib/cd-hit; \
done
install -m 0755 *.pl debian/cd-hit/usr/lib/cd-hit;
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1/
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='quickly group sequences' \
/<<PKGBUILDDIR>>/cd-hit > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit.1
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='quickly group sequences, optimised for 454 data' \
/<<PKGBUILDDIR>>/cd-hit-454 > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-454.1
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='quickly group sequences in db1 or db2 format' \
/<<PKGBUILDDIR>>/cd-hit-2d > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-2d.1
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='run CD-HIT algorithm on RNA/DNA sequences' \
/<<PKGBUILDDIR>>/cd-hit-est > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-est.1
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='run CD-HIT algorithm on RNA/DNA sequences in db1 or db2 format' \
/<<PKGBUILDDIR>>/cd-hit-est-2d > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-est-2d.1
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='divide a big clustering job into pieces to run cd-hit-2d or cd-hit-est-2d jobs' \
/<<PKGBUILDDIR>>/cd-hit-2d-para.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-2d-para.1
help2man --no-info --no-discard-stderr --version-string='4.6.6' \
--name='divide a big clustering job into pieces to run cd-hit or cd-hit-est jobs' \
/<<PKGBUILDDIR>>/cd-hit-para.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//cd-hit-para.1
# psi-cd-hit.pl is throwing some errors which are fixed using sed
# ... at least in versions <= 4.6.4 - now help2man does not work at all
#help2man --no-info --no-discard-stderr --version-string='4.6.6' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities' \
# /<<PKGBUILDDIR>>/psi-cd-hit.pl | \
# sed -e '/^Name "main::.*" used only once:/d' \
# > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit.1
# help2man does not work at all since version 4.6.4
#help2man --no-info --no-discard-stderr --version-string='4.6.6' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \
# /<<PKGBUILDDIR>>/psi-cd-hit-2d.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d.1
# FIXME: what is the difference between psi-cd-hit-2d.pl and psi-cd-hit-2d-g1.pl ?
# help2man does not work at all since version 4.6.4
#help2man --no-info --no-discard-stderr --version-string='4.6.6' \
# --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \
# /<<PKGBUILDDIR>>/psi-cd-hit-2d-g1.pl > /<<PKGBUILDDIR>>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d-g1.1
# No help output from
# cd-hit-div.pl
# clstr2tree.pl
# clstr_merge.pl
# clstr_merge_noorder.pl
# clstr_reduce.pl
# clstr_renumber.pl
# clstr_rev.pl
# clstr_sort_by.pl
# clstr_sort_prot_by
# make_multi_seq
# psi-cd-hit-local.pl -> even throws several "used only once: possible typo" errors
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-454 debian/cd-hit/usr/lib/cd-hit/cd-hit-div debian/cd-hit/usr/lib/cd-hit/cd-hit debian/cd-hit/usr/lib/cd-hit/cd-hit-2d debian/cd-hit/usr/lib/cd-hit/cd-hit-est were not linked against libpthread.so.0 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'cd-hit-dbgsym' in '../cd-hit-dbgsym_4.6.6-2_armhf.deb'.
dpkg-deb: building package 'cd-hit' in '../cd-hit_4.6.6-2_armhf.deb'.
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../cd-hit_4.6.6-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build cd-hit-4.6.6
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160820-1034
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
cd-hit_4.6.6-2_armhf.changes:
-----------------------------
Format: 1.8
Date: Sun, 14 Aug 2016 14:49:02 +0300
Source: cd-hit
Binary: cd-hit
Architecture: armhf
Version: 4.6.6-2
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Canberk Koç <canberkkoc@gmail.com>
Description:
cd-hit - suite of programs designed to quickly group sequences
Changes:
cd-hit (4.6.6-2) unstable; urgency=medium
.
[ Canberk Koç ]
* Team upload.
* Autopkgtest added
.
[ Andreas Tille ]
* Install originally named tools (including '-' to /usr/bin)
Checksums-Sha1:
6917dadc7fa4e954800f5ecd61b68f934f9a2d00 1725080 cd-hit-dbgsym_4.6.6-2_armhf.deb
5dddf9d857e731822a1b4e98ffd159989bd4e773 833052 cd-hit_4.6.6-2_armhf.deb
Checksums-Sha256:
8099235413783b8c7444ce36db30ca5c29c680e55e84f86b32b01531a21a0843 1725080 cd-hit-dbgsym_4.6.6-2_armhf.deb
65d4437b38f6cc925ed4c068a108730bc45ce059547ed8ac0312f5733b9c9ddf 833052 cd-hit_4.6.6-2_armhf.deb
Files:
41135656e4beeaa74fb2382081e86166 1725080 debug extra cd-hit-dbgsym_4.6.6-2_armhf.deb
64dd1d3462996a76894ed062550b134e 833052 science optional cd-hit_4.6.6-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
cd-hit-dbgsym_4.6.6-2_armhf.deb
-------------------------------
new debian package, version 2.0.
size 1725080 bytes: control archive=767 bytes.
616 bytes, 13 lines control
636 bytes, 6 lines md5sums
Package: cd-hit-dbgsym
Source: cd-hit
Version: 4.6.6-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1871
Depends: cd-hit (= 4.6.6-2)
Section: debug
Priority: extra
Homepage: http://weizhong-lab.ucsd.edu/cd-hit/
Description: Debug symbols for cd-hit
Auto-Built-Package: debug-symbols
Build-Ids: 319d3c758dce246f88337e634d5c1097007f97cf 3a010db8a2a990595f9b90f4354324d20570a879 3a8d5799c82cbce6ec4336bb2ff78902eec06775 63804ecf3dbc0ea61b19f218228ed1b790efafcc 8e4b649d1136d3a388aa3e79a6969e1210c0b743 9df19509a4ab0cfe243fa2a42b0fba543c876ca2
drwxr-xr-x root/root 0 2016-08-14 11:49 ./
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/.build-id/31/
-rw-r--r-- root/root 315412 2016-08-14 11:49 ./usr/lib/debug/.build-id/31/9d3c758dce246f88337e634d5c1097007f97cf.debug
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/.build-id/3a/
-rw-r--r-- root/root 318644 2016-08-14 11:49 ./usr/lib/debug/.build-id/3a/010db8a2a990595f9b90f4354324d20570a879.debug
-rw-r--r-- root/root 315376 2016-08-14 11:49 ./usr/lib/debug/.build-id/3a/8d5799c82cbce6ec4336bb2ff78902eec06775.debug
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/.build-id/63/
-rw-r--r-- root/root 315188 2016-08-14 11:49 ./usr/lib/debug/.build-id/63/804ecf3dbc0ea61b19f218228ed1b790efafcc.debug
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/.build-id/8e/
-rw-r--r-- root/root 315772 2016-08-14 11:49 ./usr/lib/debug/.build-id/8e/4b649d1136d3a388aa3e79a6969e1210c0b743.debug
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/debug/.build-id/9d/
-rw-r--r-- root/root 317952 2016-08-14 11:49 ./usr/lib/debug/.build-id/9d/f19509a4ab0cfe243fa2a42b0fba543c876ca2.debug
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/share/doc/cd-hit-dbgsym -> cd-hit
cd-hit_4.6.6-2_armhf.deb
------------------------
new debian package, version 2.0.
size 833052 bytes: control archive=2000 bytes.
898 bytes, 17 lines control
3126 bytes, 47 lines md5sums
Package: cd-hit
Version: 4.6.6-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1650
Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), perl:any
Section: science
Priority: optional
Homepage: http://weizhong-lab.ucsd.edu/cd-hit/
Description: suite of programs designed to quickly group sequences
cd-hit contains a number of programs designed to quickly group
sequences. cd-hit groups proteins into clusters that meet a user-defined
similarity threshold. cd-hit-est is similar to cd-hit, but designed to
group nucleotide sequences (without introns). cd-hit-est-2d is similar
to cd-hit-2d but designed to compare two nucleotide datasets. A number
of other related programs are also in this package. Please see the
cd-hit user manual, also part of this package, for further information.
drwxr-xr-x root/root 0 2016-08-14 11:49 ./
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/bin/
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit -> ../lib/cd-hit/cd-hit
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-2d -> ../lib/cd-hit/cd-hit-2d
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-2d-para -> ../lib/cd-hit/cd-hit-2d-para.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-454 -> ../lib/cd-hit/cd-hit-454
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-div -> ../lib/cd-hit/cd-hit-div.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-est -> ../lib/cd-hit/cd-hit-est
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-est-2d -> ../lib/cd-hit/cd-hit-est-2d
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cd-hit-para -> ../lib/cd-hit/cd-hit-para.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cdhit -> cd-hit
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cdhit-2d -> cd-hit-2d
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cdhit-454 -> cd-hit-454
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cdhit-est -> cd-hit-est
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/cdhit-est-2d -> cd-hit-est-2d
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr2tree -> ../lib/cd-hit/clstr2tree.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_merge -> ../lib/cd-hit/clstr_merge.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_merge_noorder -> ../lib/cd-hit/clstr_merge_noorder.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_reduce -> ../lib/cd-hit/clstr_reduce.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_renumber -> ../lib/cd-hit/clstr_renumber.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_rev -> ../lib/cd-hit/clstr_rev.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_sort_by -> ../lib/cd-hit/clstr_sort_by.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/clstr_sort_prot_by -> ../lib/cd-hit/clstr_sort_prot_by.pl
lrwxrwxrwx root/root 0 2016-08-14 11:49 ./usr/bin/make_multi_seq -> ../lib/cd-hit/make_multi_seq.pl
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/lib/cd-hit/
-rwxr-xr-x root/root 107616 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit
-rwxr-xr-x root/root 107616 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-2d
-rwxr-xr-x root/root 12596 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-2d-para.pl
-rwxr-xr-x root/root 107700 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-454
-rwxr-xr-x root/root 107616 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-div
-rwxr-xr-x root/root 877 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-div.pl
-rwxr-xr-x root/root 107616 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-est
-rwxr-xr-x root/root 107616 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-est-2d
-rwxr-xr-x root/root 11859 2016-08-14 11:49 ./usr/lib/cd-hit/cd-hit-para.pl
-rwxr-xr-x root/root 952 2016-08-14 11:49 ./usr/lib/cd-hit/clstr2tree.pl
-rwxr-xr-x root/root 1209 2016-08-14 11:49 ./usr/lib/cd-hit/clstr2txt.pl
-rwxr-xr-x root/root 4503 2016-08-14 11:49 ./usr/lib/cd-hit/clstr2xml.pl
-rwxr-xr-x root/root 464 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_cut.pl
-rwxr-xr-x root/root 3199 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_merge.pl
-rwxr-xr-x root/root 2162 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_merge_noorder.pl
-rwxr-xr-x root/root 3465 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_quality_eval.pl
-rwxr-xr-x root/root 2335 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_quality_eval_by_link.pl
-rwxr-xr-x root/root 1000 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_reduce.pl
-rwxr-xr-x root/root 196 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_renumber.pl
-rwxr-xr-x root/root 554 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_rep.pl
-rwxr-xr-x root/root 1160 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_reps_faa_rev.pl
-rwxr-xr-x root/root 1620 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_rev.pl
-rwxr-xr-x root/root 387 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_select.pl
-rwxr-xr-x root/root 555 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_select_rep.pl
-rwxr-xr-x root/root 779 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_size_histogram.pl
-rwxr-xr-x root/root 725 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_size_stat.pl
-rwxr-xr-x root/root 806 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_sort_by.pl
-rwxr-xr-x root/root 1291 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_sort_prot_by.pl
-rwxr-xr-x root/root 2928 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_sql_tbl.pl
-rwxr-xr-x root/root 1103 2016-08-14 11:49 ./usr/lib/cd-hit/clstr_sql_tbl_sort.pl
-rwxr-xr-x root/root 1670 2016-08-14 11:49 ./usr/lib/cd-hit/make_multi_seq.pl
-rwxr-xr-x root/root 3668 2016-08-14 11:49 ./usr/lib/cd-hit/plot_2d.pl
-rwxr-xr-x root/root 2190 2016-08-14 11:49 ./usr/lib/cd-hit/plot_len1.pl
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/doc-base/
-rw-r--r-- root/root 753 2016-08-14 11:49 ./usr/share/doc-base/cd-hit
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/doc/cd-hit/
-rw-r--r-- root/root 771 2016-08-14 11:49 ./usr/share/doc/cd-hit/README.Debian
-rw-r--r-- root/root 898823 2016-07-12 00:17 ./usr/share/doc/cd-hit/cdhit-user-guide.pdf
-rw-r--r-- root/root 1625 2016-08-14 11:49 ./usr/share/doc/cd-hit/changelog.Debian.gz
-rw-r--r-- root/root 962 2016-07-12 00:17 ./usr/share/doc/cd-hit/changelog.gz
-rw-r--r-- root/root 1150 2016-08-14 11:49 ./usr/share/doc/cd-hit/copyright
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/doc/cd-hit/examples/
-rw-r--r-- root/root 2269 2016-08-14 11:49 ./usr/share/doc/cd-hit/examples/example.fa
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/man/
drwxr-xr-x root/root 0 2016-08-14 11:49 ./usr/share/man/man1/
-rw-r--r-- root/root 1147 2016-08-14 11:49 ./usr/share/man/man1/cd-hit-2d-para.1.gz
-rw-r--r-- root/root 1689 2016-08-14 11:49 ./usr/share/man/man1/cd-hit-2d.1.gz
-rw-r--r-- root/root 1352 2016-08-14 11:49 ./usr/share/man/man1/cd-hit-454.1.gz
-rw-r--r-- root/root 1920 2016-08-14 11:49 ./usr/share/man/man1/cd-hit-est-2d.1.gz
-rw-r--r-- root/root 1814 2016-08-14 11:49 ./usr/share/man/man1/cd-hit-est.1.gz
-rw-r--r-- root/root 1110 2016-08-14 11:49 ./usr/share/man/man1/cd-hit-para.1.gz
-rw-r--r-- root/root 1657 2016-08-14 11:49 ./usr/share/man/man1/cd-hit.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 16340
Build-Time: 183
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 187
Job: cd-hit_4.6.6-2
Machine Architecture: armhf
Package: cd-hit
Package-Time: 422
Source-Version: 4.6.6-2
Space: 16340
Status: successful
Version: 4.6.6-2
--------------------------------------------------------------------------------
Finished at 20160820-1034
Build needed 00:07:02, 16340k disc space