beast-mcmc →
1.10.4+dfsg-5 →
armhf → 2022-11-29 04:55:24
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| beast-mcmc 1.10.4+dfsg-5 (armhf) Tue, 29 Nov 2022 04:38:40 +0000 |
+==============================================================================+
Package: beast-mcmc
Version: 1.10.4+dfsg-5
Source Version: 1.10.4+dfsg-5
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-67f0500a-ac76-4203-978a-30e56cc35561' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.4 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.7 MB in 10s (2739 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'beast-mcmc' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/beast-mcmc.git
Please use:
git clone https://salsa.debian.org/med-team/beast-mcmc.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 5050 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main beast-mcmc 1.10.4+dfsg-5 (dsc) [2472 B]
Get:2 http://172.17.4.1/private bookworm-staging/main beast-mcmc 1.10.4+dfsg-5 (tar) [5022 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main beast-mcmc 1.10.4+dfsg-5 (diff) [25.4 kB]
Fetched 5050 kB in 1s (8062 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/beast-mcmc-PQSViV/beast-mcmc-1.10.4+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/beast-mcmc-PQSViV' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-Z2Gd12/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-Z2Gd12/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Packages [435 B]
Fetched 2111 B in 0s (8449 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap libperl5.34 netbase perl-modules-5.34 sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 77 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (64.7 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14774 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), javahelper, ant, ant-optional, default-jdk, libjebl2-java, libjam-java, figtree, liboptions-java, libhmsbeagle-java, libcolt-free-java, libmpj-java, r-cran-rjava, libcommons-math-java, libjdom1-java, junit4, libmtj-java, libitext1-java, libejml-java (>= 0.41), libjlapack-java
Filtered Build-Depends: debhelper-compat (= 13), javahelper, ant, ant-optional, default-jdk, libjebl2-java, libjam-java, figtree, liboptions-java, libhmsbeagle-java, libcolt-free-java, libmpj-java, r-cran-rjava, libcommons-math-java, libjdom1-java, junit4, libmtj-java, libitext1-java, libejml-java (>= 0.41), libjlapack-java
dpkg-deb: building package 'sbuild-build-depends-beast-mcmc-dummy' in '/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive/sbuild-build-depends-beast-mcmc-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-beast-mcmc-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Sources [623 B]
Get:5 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ Packages [707 B]
Fetched 2663 B in 0s (11.3 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install beast-mcmc build dependencies (apt-based resolver)
----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap libperl5.34 perl-modules-5.34
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
adwaita-icon-theme ant ant-optional at-spi2-common autoconf automake
autopoint autotools-dev bsdextrautils bsdutils ca-certificates
ca-certificates-java cpp-12 dctrl-tools debhelper default-jdk
default-jdk-headless default-jre default-jre-headless devscripts
dh-autoreconf dh-strip-nondeterminism dwz figtree file fontconfig
fontconfig-config fonts-dejavu-core g++-12 gcc-12 gcc-12-base gettext
gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme
intltool-debian java-common java-wrappers javahelper junit4 junit5
libactivation-java libapache-pom-java libapiguardian-java
libarchive-zip-perl libasan8 libasound2 libasound2-data libatk1.0-0
libatomic1 libauto64fto32f-java libavahi-client3 libavahi-common-data
libavahi-common3 libb-hooks-op-check-perl libbatik-java libblas3 libblkid1
libbrotli1 libbsd0 libcairo2 libcc1-0 libclang-common-14-dev libclang-cpp14
libclass-method-modifiers-perl libclass-xsaccessor-perl libclc-14
libclc-14-dev libclone-perl libcolt-free-java libcommons-cli-java
libcommons-codec-java libcommons-io-java libcommons-logging-java
libcommons-math-java libcommons-parent-java libconcurrent-java libcups2
libcurl4 libdatrie1 libdbus-1-3 libdebhelper-perl libdeflate0
libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common libdrm-nouveau2
libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libejml-java
libelf1 libencode-locale-perl libexpat1 libf2j-java libfile-dirlist-perl
libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl
libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6
libfribidi0 libgcc-12-dev libgcc-s1 libgdk-pixbuf-2.0-0
libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java libgfortran5
libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0
libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libgtk2.0-0 libgtk2.0-common
libhamcrest-java libharfbuzz0b libhmsbeagle-java libhmsbeagle1v5
libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
libhttp-negotiate-perl libice6 libicu72 libimport-into-perl libio-html-perl
libio-pty-perl libio-socket-ssl-perl libipc-run-perl libitext1-java
libitext5-java libjam-java libjaxen-java libjaxp1.3-java libjbig0
libjdom1-java libjebl2-java libjetbrains-annotations-java libjlapack-java
libjpeg62-turbo libjsr305-java liblapack3 liblcms2-2 liblerc4 libllvm14
liblog4j1.2-java liblombok-java liblwp-mediatypes-perl
liblwp-protocol-https-perl libmagic-mgc libmagic1 libmd0
libmodule-runtime-perl libmoo-perl libmount1 libmpdec3 libmpj-java
libmtj-java libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnspr4
libnss3 libopentest4j-java libopentest4j-reporting-java liboptions-java
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libparams-classify-perl libpcsclite1 libpicocli-java libpipeline1
libpixman-1-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.10-minimal
libpython3.10-stdlib libregexp-ipv6-perl librole-tiny-perl librtmp1
libsensors-config libsensors5 libsm6 libsmartcols1 libssh2-1 libssl3
libstdc++-12-dev libstdc++6 libsub-override-perl libsub-quote-perl libtcl8.6
libthai-data libthai0 libtiff5 libtimedate-perl libtinfo5 libtk8.6 libtool
libtry-tiny-perl libubsan1 libuchardet0 libunivocity-parsers-java
liburi-perl libuuid1 libwebp7 libwww-perl libwww-robotrules-perl libx11-6
libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0
libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3
libxft2 libxi6 libxinerama1 libxml-commons-external-java libxml2
libxmlgraphics-commons-java libxrandr2 libxrender1 libxshmfence1 libxss1
libxt6 libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types mesa-opencl-icd
mount ocl-icd-libopencl1 openjdk-17-jdk openjdk-17-jdk-headless
openjdk-17-jre openjdk-17-jre-headless openssl patchutils
perl-openssl-defaults po-debconf python3 python3-minimal python3.10
python3.10-minimal r-base-core r-cran-rjava shared-mime-info ucf unzip
util-linux util-linux-extra wdiff x11-common xdg-utils zip
Suggested packages:
ant-doc antlr javacc junit jython libbcel-java libbsf-java
libcommons-net-java libmail-java libjdepend-java libjsch-java liboro-java
libregexp-java libxalan2-java libxml-commons-resolver1.1-java libxz-java
autoconf-archive gnu-standards autoconf-doc gcc-12-locales cpp-12-doc
debtags dh-make adequate at autopkgtest bls-standalone bsd-mailx | mailx
check-all-the-things cvs-buildpackage diffoscope disorderfs dose-extra duck
elpa-devscripts faketime gnuplot how-can-i-help libauthen-sasl-perl
libdbd-pg-perl libfile-desktopentry-perl libnet-smtps-perl libterm-size-perl
libyaml-syck-perl mmdebstrap mozilla-devscripts mutt piuparts
postgresql-client pristine-lfs quilt ratt reprotest ssh-client
svn-buildpackage w3m gcc-12-doc gettext-doc libasprintf-dev libgettextpo-dev
groff libasound2-plugins alsa-utils librhino-java libcommons-io-java-doc
libavalon-framework-java libcommons-logging-java-doc
libexcalibur-logkit-java cups-common low-memory-monitor gvfs
libdata-dump-perl libbcpkix-java libbcprov-java libxml-security-java
libitext5-java-doc libdom4j-java libxom-java libjdom1-java-doc
libjetbrains-annotations-java-doc libjsr305-java-doc liblcms2-utils
liblog4j1.2-java-doc libcrypt-ssleay-perl cryptsetup-bin
libscalar-number-perl pcscd lm-sensors libstdc++-12-doc tcl8.6 tk8.6
libtool-doc gfortran | fortran95-compiler gcj-jdk libsub-name-perl
libbusiness-isbn-perl libauthen-ntlm-perl libxmlgraphics-commons-java-doc
m4-doc apparmor less www-browser nfs-common openjdk-17-demo
openjdk-17-source visualvm libnss-mdns fonts-dejavu-extra
fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
| fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
python3-venv python3.10-venv python3.10-doc binfmt-support elpa-ess
r-doc-info | r-doc-pdf r-mathlib r-base-html dosfstools kbd
util-linux-locales wdiff-doc
Recommended packages:
librsvg2-common dput | dupload libdistro-info-perl libgit-wrapper-perl
libgitlab-api-v4-perl liblist-compare-perl libstring-shellquote-perl
licensecheck lintian python3-apt python3-debian python3-magic
python3-requests python3-unidiff python3-xdg strace wget | curl
debian-keyring equivs libsoap-lite-perl pristine-tar curl | wget | lynx
alsa-ucm-conf alsa-topology-conf dbus libarchive-cpio-perl
libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgail-common
libgtk2.0-bin libhtml-format-perl libnamespace-clean-perl publicsuffix
libltdl-dev uuid-runtime libdata-dump-perl libhtml-form-perl
libhttp-daemon-perl libmailtools-perl libxt-dev libatk-wrapper-java-jni
fonts-dejavu-extra libmail-sendmail-perl r-recommended r-base-dev r-doc-html
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
adwaita-icon-theme ant ant-optional at-spi2-common autoconf automake
autopoint autotools-dev bsdextrautils ca-certificates ca-certificates-java
dctrl-tools debhelper default-jdk default-jdk-headless default-jre
default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dwz
figtree file fontconfig fontconfig-config fonts-dejavu-core gettext
gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme
intltool-debian java-common java-wrappers javahelper junit4 junit5
libactivation-java libapache-pom-java libapiguardian-java
libarchive-zip-perl libasound2 libasound2-data libatk1.0-0
libauto64fto32f-java libavahi-client3 libavahi-common-data libavahi-common3
libb-hooks-op-check-perl libbatik-java libblas3 libbrotli1 libbsd0 libcairo2
libclang-common-14-dev libclang-cpp14 libclass-method-modifiers-perl
libclass-xsaccessor-perl libclc-14 libclc-14-dev libclone-perl
libcolt-free-java libcommons-cli-java libcommons-codec-java
libcommons-io-java libcommons-logging-java libcommons-math-java
libcommons-parent-java libconcurrent-java libcups2 libcurl4 libdatrie1
libdbus-1-3 libdebhelper-perl libdeflate0 libdevel-callchecker-perl
libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2
libdynaloader-functions-perl libedit2 libejml-java libelf1
libencode-locale-perl libexpat1 libf2j-java libfile-dirlist-perl
libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl
libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6
libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common
libgeronimo-annotation-1.3-spec-java libgfortran5 libgif7 libgl1
libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0
libgraphite2-3 libgtk2.0-0 libgtk2.0-common libhamcrest-java libharfbuzz0b
libhmsbeagle-java libhmsbeagle1v5 libhtml-parser-perl libhtml-tagset-perl
libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
libhttp-message-perl libhttp-negotiate-perl libice6 libicu72
libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
libipc-run-perl libitext1-java libitext5-java libjam-java libjaxen-java
libjaxp1.3-java libjbig0 libjdom1-java libjebl2-java
libjetbrains-annotations-java libjlapack-java libjpeg62-turbo libjsr305-java
liblapack3 liblcms2-2 liblerc4 libllvm14 liblog4j1.2-java liblombok-java
liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1
libmd0 libmodule-runtime-perl libmoo-perl libmpdec3 libmpj-java libmtj-java
libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnspr4 libnss3
libopentest4j-java libopentest4j-reporting-java liboptions-java
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libparams-classify-perl libpcsclite1 libpicocli-java libpipeline1
libpixman-1-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.10-minimal
libpython3.10-stdlib libregexp-ipv6-perl librole-tiny-perl librtmp1
libsensors-config libsensors5 libsm6 libssh2-1 libsub-override-perl
libsub-quote-perl libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl
libtinfo5 libtk8.6 libtool libtry-tiny-perl libuchardet0
libunivocity-parsers-java liburi-perl libwebp7 libwww-perl
libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6
libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0
libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1
libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxi6 libxinerama1
libxml-commons-external-java libxml2 libxmlgraphics-commons-java libxrandr2
libxrender1 libxshmfence1 libxss1 libxt6 libxtst6 libxxf86vm1 libz3-4 m4
man-db media-types mesa-opencl-icd ocl-icd-libopencl1 openjdk-17-jdk
openjdk-17-jdk-headless openjdk-17-jre openjdk-17-jre-headless openssl
patchutils perl-openssl-defaults po-debconf python3 python3-minimal
python3.10 python3.10-minimal r-base-core r-cran-rjava
sbuild-build-depends-beast-mcmc-dummy shared-mime-info ucf unzip wdiff
x11-common xdg-utils zip
The following packages will be upgraded:
bsdutils cpp-12 g++-12 gcc-12 gcc-12-base libasan8 libatomic1 libblkid1
libcc1-0 libgcc-12-dev libgcc-s1 libgomp1 libmount1 libsmartcols1 libssl3
libstdc++-12-dev libstdc++6 libubsan1 libuuid1 mount util-linux
util-linux-extra
22 upgraded, 265 newly installed, 0 to remove and 55 not upgraded.
Need to get 513 MB of archives.
After this operation, 1109 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-Z2Gd12/apt_archive ./ sbuild-build-depends-beast-mcmc-dummy 0.invalid.0 [996 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf bsdutils armhf 1:2.38.1-4 [83.9 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libsmartcols1 armhf 2.38.1-4 [91.6 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf util-linux-extra armhf 2.38.1-4 [98.1 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf util-linux armhf 2.38.1-4 [1062 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf mount armhf 2.38.1-4 [126 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12.2.0-9+rpi1 [32.2 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12.2.0-9+rpi1 [95.4 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12.2.0-9+rpi1 [8224 B]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libasan8 armhf 12.2.0-9+rpi1 [2089 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12.2.0-9+rpi1 [861 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12.2.0-9+rpi1 [37.2 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12.2.0-9+rpi1 [504 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf g++-12 armhf 12.2.0-9+rpi1 [7913 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-12-dev armhf 12.2.0-9+rpi1 [2025 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libgcc-12-dev armhf 12.2.0-9+rpi1 [725 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf gcc-12 armhf 12.2.0-9+rpi1 [14.2 MB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf cpp-12 armhf 12.2.0-9+rpi1 [7156 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12.2.0-9+rpi1 [36.1 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-1 [1614 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.8-3 [769 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.8-3 [1478 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-1 [38.7 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libuuid1 armhf 2.38.1-4 [27.1 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.8-3 [1597 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.8-3 [506 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-1 [21.7 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.6-1 [38.2 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libblkid1 armhf 2.38.1-4 [131 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libmount1 armhf 2.38.1-4 [144 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.1-1 [1341 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-1 [1349 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libgdk-pixbuf2.0-common all 2.42.10+dfsg-1 [306 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.1-2 [1214 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf shared-mime-info armhf 2.2-1 [726 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.38-2 [273 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.2-2+b1 [237 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libtiff5 armhf 4.4.0-6 [278 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.10+dfsg-1 [123 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf gtk-update-icon-cache armhf 3.24.35-1 [41.3 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf adwaita-icon-theme all 43-1 [5124 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates-java all 20220719 [16.1 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf java-common all 0.73 [6268 B]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common-data armhf 0.8-6+b1 [124 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common3 armhf 0.8-6+b1 [55.8 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf libdbus-1-3 armhf 1.14.4-1 [211 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf libavahi-client3 armhf 0.8-6+b1 [58.5 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libcups2 armhf 2.4.2-1+b1 [311 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.13.1-1 [125 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3 [352 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.13.1-4.5 [281 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.13.1-4.5 [330 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libnspr4 armhf 2:4.35-1 [90.9 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libnss3 armhf 2:3.85-1 [1094 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libasound2-data all 1.2.7.2-1 [39.1 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf libasound2 armhf 1.2.7.2-1 [322 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 5.2.0-2+b1 [1832 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libpcsclite1 armhf 1.9.9-1 [58.1 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jre-headless armhf 17.0.4+8-1+rpi1 [40.1 MB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf default-jre-headless armhf 2:1.17-73 [2812 B]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf ant all 1.10.12-3 [2124 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf ant-optional all 1.10.12-3 [454 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf at-spi2-common all 2.46.0-4 [161 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.1 [80.8 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14+20220924-2 [93.1 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.1 [941 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libgtk2.0-common all 2.24.33-2 [2700 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libatk1.0-0 armhf 2.46.0-4 [41.4 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-1 [112 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.1-2 [308 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.1-2 [704 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-6 [496 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf fontconfig armhf 2.13.1-4.5 [416 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.50.10+ds-1 [214 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.50.10+ds-1 [68.6 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.50.10+ds-1 [58.3 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf libxcomposite1 armhf 1:0.4.5-1 [16.2 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf libxfixes3 armhf 1:6.0.0-2 [21.2 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf libxcursor1 armhf 1:1.2.1-1 [38.0 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf libxdamage1 armhf 1:1.1.5-2 [15.2 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf libxi6 armhf 2:1.8-1 [78.1 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf libxinerama1 armhf 2:1.1.4-3 [17.4 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libxrandr2 armhf 2:1.5.2-2 [35.5 kB]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf libgtk2.0-0 armhf 2.24.33-2 [1546 kB]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libglvnd0 armhf 1.5.0-1 [51.5 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf libdrm-common all 2.4.114-1+rpi1 [7276 B]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libdrm2 armhf 2.4.114-1+rpi1 [32.8 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libglapi-mesa armhf 22.2.0-1+rpi1 [84.6 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libx11-xcb1 armhf 2:1.8.1-2 [203 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri2-0 armhf 1.15-1 [107 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri3-0 armhf 1.15-1 [107 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libxcb-glx0 armhf 1.15-1 [121 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf libxcb-present0 armhf 1.15-1 [105 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf libxcb-sync1 armhf 1.15-1 [108 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xfixes0 armhf 1.15-1 [109 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf libdrm-amdgpu1 armhf 2.4.114-1+rpi1 [19.3 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf libdrm-nouveau2 armhf 2.4.114-1+rpi1 [17.0 kB]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf libdrm-radeon1 armhf 2.4.114-1+rpi1 [20.7 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf libedit2 armhf 3.1-20221030-2 [76.2 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf libz3-4 armhf 4.8.12-3 [5798 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf libllvm14 armhf 1:14.0.6-2+rpi1 [19.5 MB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf libsensors-config all 1:3.6.0-7.1 [14.3 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf libsensors5 armhf 1:3.6.0-7.1 [31.6 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf libgl1-mesa-dri armhf 22.2.0-1+rpi1 [5593 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf libglx-mesa0 armhf 22.2.0-1+rpi1 [171 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf libglx0 armhf 1.5.0-1 [32.4 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf libgl1 armhf 1.5.0-1 [91.8 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf libgif7 armhf 5.2.1-2.5 [44.7 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf libxtst6 armhf 2:1.2.3-1.1 [26.3 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jre armhf 17.0.4+8-1+rpi1 [142 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf default-jre armhf 2:1.17-73 [1060 B]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jdk-headless armhf 17.0.4+8-1+rpi1 [259 MB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf default-jdk-headless armhf 2:1.17-73 [1108 B]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jdk armhf 17.0.4+8-1+rpi1 [5029 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf default-jdk armhf 2:1.17-73 [1068 B]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf libfile-dirlist-perl all 0.05-3 [7600 B]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf libfile-which-perl all 1.27-2 [15.1 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf libfile-homedir-perl all 1.006-1 [43.8 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf libfile-touch-perl all 0.12-2 [8816 B]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf libio-pty-perl armhf 1:1.15-2+b2 [34.5 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf libipc-run-perl all 20220807.0-1 [104 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf libclass-method-modifiers-perl all 2.13-2 [19.4 kB]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf libclass-xsaccessor-perl armhf 1.19-4+b1 [35.5 kB]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf libb-hooks-op-check-perl armhf 0.22-2+b1 [10.3 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf libdynaloader-functions-perl all 0.003-3 [12.7 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf libdevel-callchecker-perl armhf 0.008-1+b4 [15.4 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf libparams-classify-perl armhf 0.015-2+b1 [22.0 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf libimport-into-perl all 1.002005-2 [11.3 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf librole-tiny-perl all 2.002004-1 [21.4 kB]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf libsub-quote-perl all 2.006006-1 [21.0 kB]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf libmoo-perl all 2.005004-3 [60.5 kB]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf libencode-locale-perl all 1.05-3 [12.9 kB]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf libhttp-date-perl all 6.05-2 [10.5 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf libfile-listing-perl all 6.15-1 [12.6 kB]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf libhtml-tagset-perl all 3.20-6 [11.7 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf libregexp-ipv6-perl all 0.03-3 [5212 B]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf liburi-perl all 5.17-1 [90.4 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf libhtml-parser-perl armhf 3.80-1 [97.2 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf libhtml-tree-perl all 5.07-2 [213 kB]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf libclone-perl armhf 0.46-1 [13.2 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf libio-html-perl all 1.004-3 [16.2 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf libhttp-message-perl all 6.44-1 [81.7 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf libhttp-cookies-perl all 6.10-1 [19.6 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf perl-openssl-defaults armhf 7+b1 [7916 B]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf libnet-ssleay-perl armhf 1.92-2+b2 [297 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf libio-socket-ssl-perl all 2.077-1 [217 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf libnet-http-perl all 6.22-1 [25.3 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf liblwp-protocol-https-perl all 6.10-1 [12.2 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf libwww-perl all 6.67-1 [194 kB]
Get:211 http://172.17.4.1/private bookworm-staging/main armhf patchutils armhf 0.4.2-1 [68.7 kB]
Get:212 http://172.17.4.1/private bookworm-staging/main armhf libtinfo5 armhf 6.3+20220423-2 [334 kB]
Get:213 http://172.17.4.1/private bookworm-staging/main armhf wdiff armhf 1.2.2-2 [120 kB]
Get:214 http://172.17.4.1/private bookworm-staging/main armhf devscripts armhf 2.22.2 [1181 kB]
Get:215 http://172.17.4.1/private bookworm-staging/main armhf libactivation-java all 1.2.0-2 [84.7 kB]
Get:216 http://172.17.4.1/private bookworm-staging/main armhf unzip armhf 6.0-27 [152 kB]
Get:217 http://172.17.4.1/private bookworm-staging/main armhf java-wrappers all 0.3 [10.9 kB]
Get:218 http://172.17.4.1/private bookworm-staging/main armhf libjaxp1.3-java all 1.3.05-6 [227 kB]
Get:219 http://172.17.4.1/private bookworm-staging/main armhf libxml-commons-external-java all 1.4.01-5 [240 kB]
Get:220 http://172.17.4.1/private bookworm-staging/main armhf libapache-pom-java all 25-2 [5260 B]
Get:221 http://172.17.4.1/private bookworm-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:222 http://172.17.4.1/private bookworm-staging/main armhf libcommons-io-java all 2.11.0-2 [319 kB]
Get:223 http://172.17.4.1/private bookworm-staging/main armhf libcommons-logging-java all 1.2-3 [62.4 kB]
Get:224 http://172.17.4.1/private bookworm-staging/main armhf libxmlgraphics-commons-java all 2.7-1 [622 kB]
Get:225 http://172.17.4.1/private bookworm-staging/main armhf libbatik-java all 1.16+dfsg-1 [3908 kB]
Get:226 http://172.17.4.1/private bookworm-staging/main armhf libitext5-java all 5.5.13.3-1 [2634 kB]
Get:227 http://172.17.4.1/private bookworm-staging/main armhf libjam-java all 0.1.git20180106.740247a+dfsg-1 [164 kB]
Get:228 http://172.17.4.1/private bookworm-staging/main armhf libjebl2-java all 0.1+git20201011.969bd4b-1 [516 kB]
Get:229 http://172.17.4.1/private bookworm-staging/main armhf figtree all 1.4.4-5 [872 kB]
Get:230 http://172.17.4.1/private bookworm-staging/main armhf javahelper all 0.78 [97.2 kB]
Get:231 http://172.17.4.1/private bookworm-staging/main armhf libhamcrest-java all 2.2-1 [121 kB]
Get:232 http://172.17.4.1/private bookworm-staging/main armhf junit4 all 4.13.2-3 [348 kB]
Get:233 http://172.17.4.1/private bookworm-staging/main armhf libapiguardian-java all 1.1.2-1 [4656 B]
Get:234 http://172.17.4.1/private bookworm-staging/main armhf libopentest4j-java all 1.2.0-4 [9516 B]
Get:235 http://172.17.4.1/private bookworm-staging/main armhf libopentest4j-reporting-java all 0.1.0-M1-2 [49.0 kB]
Get:236 http://172.17.4.1/private bookworm-staging/main armhf libpicocli-java all 4.6.2-2 [390 kB]
Get:237 http://172.17.4.1/private bookworm-staging/main armhf libunivocity-parsers-java all 2.9.1-1 [397 kB]
Get:238 http://172.17.4.1/private bookworm-staging/main armhf junit5 all 5.9.1-1 [2378 kB]
Get:239 http://172.17.4.1/private bookworm-staging/main armhf libauto64fto32f-java all 2.1+ds-1 [14.2 kB]
Get:240 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.10.1-2 [109 kB]
Get:241 http://172.17.4.1/private bookworm-staging/main armhf libclang-common-14-dev armhf 1:14.0.6-2+rpi1 [3698 kB]
Get:242 http://172.17.4.1/private bookworm-staging/main armhf libclang-cpp14 armhf 1:14.0.6-2+rpi1 [9481 kB]
Get:243 http://172.17.4.1/private bookworm-staging/main armhf libclc-14-dev all 1:14.0.6-2+rpi1 [79.1 kB]
Get:244 http://172.17.4.1/private bookworm-staging/main armhf libclc-14 all 1:14.0.6-2+rpi1 [8688 kB]
Get:245 http://172.17.4.1/private bookworm-staging/main armhf libconcurrent-java all 1.3.4-5 [138 kB]
Get:246 http://172.17.4.1/private bookworm-staging/main armhf libcolt-free-java all 1.2.0+dfsg-7 [434 kB]
Get:247 http://172.17.4.1/private bookworm-staging/main armhf libcommons-cli-java all 1.4-2 [57.3 kB]
Get:248 http://172.17.4.1/private bookworm-staging/main armhf libcommons-codec-java all 1.15-1 [292 kB]
Get:249 http://172.17.4.1/private bookworm-staging/main armhf libcommons-math-java all 2.2-8 [926 kB]
Get:250 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.50.0-1 [65.0 kB]
Get:251 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:252 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:253 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3+b1 [161 kB]
Get:254 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.86.0-2 [322 kB]
Get:255 http://172.17.4.1/private bookworm-staging/main armhf libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB]
Get:256 http://172.17.4.1/private bookworm-staging/main armhf libjetbrains-annotations-java all 23.0.0-1 [31.2 kB]
Get:257 http://172.17.4.1/private bookworm-staging/main armhf libjsr305-java all 0.1~+svn49-11 [26.9 kB]
Get:258 http://172.17.4.1/private bookworm-staging/main armhf liblombok-java all 1.18.24-1 [1774 kB]
Get:259 http://172.17.4.1/private bookworm-staging/main armhf libejml-java all 0.41+ds-2 [2499 kB]
Get:260 http://172.17.4.1/private bookworm-staging/main armhf libf2j-java all 0.8.1+dfsg-5 [62.3 kB]
Get:261 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-9+rpi1 [238 kB]
Get:262 http://172.17.4.1/private bookworm-staging/main armhf ocl-icd-libopencl1 armhf 2.3.1-1 [40.3 kB]
Get:263 http://172.17.4.1/private bookworm-staging/main armhf mesa-opencl-icd armhf 22.2.0-1+rpi1 [5678 kB]
Get:264 http://172.17.4.1/private bookworm-staging/main armhf libhmsbeagle1v5 armhf 3.1.2+dfsg-12 [139 kB]
Get:265 http://172.17.4.1/private bookworm-staging/main armhf libhmsbeagle-java armhf 3.1.2+dfsg-12 [29.0 kB]
Get:266 http://172.17.4.1/private bookworm-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:267 http://172.17.4.1/private bookworm-staging/main armhf libitext1-java all 1.4-7 [1257 kB]
Get:268 http://172.17.4.1/private bookworm-staging/main armhf libjaxen-java all 1.1.6-4 [214 kB]
Get:269 http://172.17.4.1/private bookworm-staging/main armhf libjdom1-java all 1.1.3-2.1 [156 kB]
Get:270 http://172.17.4.1/private bookworm-staging/main armhf libjlapack-java all 0.8~dfsg-5 [925 kB]
Get:271 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.10.1-2 [1587 kB]
Get:272 http://172.17.4.1/private bookworm-staging/main armhf liblog4j1.2-java all 1.2.17-11 [444 kB]
Get:273 http://172.17.4.1/private bookworm-staging/main armhf libmpj-java all 0.44+dfsg-4 [447 kB]
Get:274 http://172.17.4.1/private bookworm-staging/main armhf libmtj-java all 0.9.14+dfsg-7 [126 kB]
Get:275 http://172.17.4.1/private bookworm-staging/main armhf liboptions-java all 0.0.20120113-3 [28.7 kB]
Get:276 http://172.17.4.1/private bookworm-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:277 http://172.17.4.1/private bookworm-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:278 http://172.17.4.1/private bookworm-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:279 http://172.17.4.1/private bookworm-staging/main armhf libtcl8.6 armhf 8.6.12+dfsg-1 [906 kB]
Get:280 http://172.17.4.1/private bookworm-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:281 http://172.17.4.1/private bookworm-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:282 http://172.17.4.1/private bookworm-staging/main armhf libtk8.6 armhf 8.6.12-1 [680 kB]
Get:283 http://172.17.4.1/private bookworm-staging/main armhf libxt6 armhf 1:1.2.1-1 [159 kB]
Get:284 http://172.17.4.1/private bookworm-staging/main armhf zip armhf 3.0-12 [209 kB]
Get:285 http://172.17.4.1/private bookworm-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:286 http://172.17.4.1/private bookworm-staging/main armhf r-base-core armhf 4.2.2.20221110-1 [25.6 MB]
Get:287 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rjava armhf 1.0-6-1 [918 kB]
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Setting up libfile-which-perl (1.27-2) ...
Setting up libxau6:armhf (1:1.0.9-1) ...
Setting up libpsl5:armhf (0.21.0-1.2) ...
Setting up cpp-12 (12.2.0-9+rpi1) ...
Setting up libopentest4j-reporting-java (0.1.0-M1-2) ...
Setting up libicu72:armhf (72.1-3) ...
Setting up liblerc4:armhf (4.0.0+ds-2) ...
Setting up libjsr305-java (0.1~+svn49-11) ...
Setting up bsdextrautils (2.38.1-4) ...
Setting up libmtj-java (0.9.14+dfsg-7) ...
Setting up hicolor-icon-theme (0.17-2) ...
Setting up java-common (0.73) ...
Setting up libdynaloader-functions-perl (0.003-3) ...
Setting up libdatrie1:armhf (0.2.13-2+b2) ...
Setting up liblombok-java (1.18.24-1) ...
Setting up libclass-method-modifiers-perl (2.13-2) ...
Setting up libcommons-cli-java (1.4-2) ...
Setting up libio-pty-perl (1:1.15-2+b2) ...
Setting up libmagic-mgc (1:5.41-4) ...
Setting up libclone-perl:armhf (0.46-1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.74.1-2) ...
No schema files found: doing nothing.
Setting up libglvnd0:armhf (1.5.0-1) ...
Setting up libhtml-tagset-perl (3.20-6) ...
Setting up unzip (6.0-27) ...
Setting up libdebhelper-perl (13.11.1) ...
Setting up libbrotli1:armhf (1.0.9-2+b2) ...
Setting up liblwp-mediatypes-perl (6.04-1) ...
Setting up libgdk-pixbuf2.0-common (2.42.10+dfsg-1) ...
Setting up libpicocli-java (4.6.2-2) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libtry-tiny-perl (0.31-2) ...
Setting up libsensors-config (1:3.6.0-7.1) ...
Setting up libnghttp2-14:armhf (1.50.0-1) ...
Setting up libmagic1:armhf (1:5.41-4) ...
Setting up libdeflate0:armhf (1.14-1) ...
Setting up perl-openssl-defaults:armhf (7+b1) ...
Setting up liblog4j1.2-java (1.2.17-11) ...
Setting up gettext-base (0.21-10) ...
Setting up m4 (1.4.19-1) ...
Setting up libencode-locale-perl (1.05-3) ...
Setting up file (1:5.41-4) ...
Setting up libgomp1:armhf (12.2.0-9+rpi1) ...
Setting up libunivocity-parsers-java (2.9.1-1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libauto64fto32f-java (2.1+ds-1) ...
Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ...
Setting up libasound2-data (1.2.7.2-1) ...
Setting up patchutils (0.4.2-1) ...
Setting up zip (3.0-12) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:armhf (4.8.12-3) ...
Setting up libblas3:armhf (3.10.1-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libjpeg62-turbo:armhf (1:2.1.2-1) ...
Setting up libjaxen-java (1.1.6-4) ...
Setting up libapiguardian-java (1.1.2-1) ...
Setting up libx11-data (2:1.8.1-2) ...
Setting up libnspr4:armhf (2:4.35-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libapache-pom-java (25-2) ...
Setting up libavahi-common-data:armhf (0.8-6+b1) ...
Setting up libdbus-1-3:armhf (1.14.4-1) ...
Setting up libfribidi0:armhf (1.0.8-2.1) ...
Setting up libpng16-16:armhf (1.6.38-2) ...
Setting up libitext5-java (5.5.13.3-1) ...
Setting up libitext1-java (1.4-7) ...
Setting up libio-html-perl (1.004-3) ...
Setting up libtcl8.6:armhf (8.6.12+dfsg-1) ...
Setting up autopoint (0.21-10) ...
Setting up libb-hooks-op-check-perl:armhf (0.22-2+b1) ...
Setting up fonts-dejavu-core (2.37-2) ...
Setting up libipc-run-perl (20220807.0-1) ...
Setting up libpcsclite1:armhf (1.9.9-1) ...
Setting up libclc-14-dev (1:14.0.6-2+rpi1) ...
Setting up ucf (3.0043) ...
Setting up libsensors5:armhf (1:3.6.0-7.1) ...
Setting up libactivation-java (1.2.0-2) ...
Setting up libhamcrest-java (2.2-1) ...
Setting up libglapi-mesa:armhf (22.2.0-1+rpi1) ...
Setting up libgfortran5:armhf (12.2.0-9+rpi1) ...
Setting up autoconf (2.71-2) ...
Setting up libwebp7:armhf (1.2.2-2+b1) ...
Setting up libtimedate-perl (2.3300-2) ...
Setting up libregexp-ipv6-perl (0.03-3) ...
Setting up libubsan1:armhf (12.2.0-9+rpi1) ...
Setting up libgif7:armhf (5.2.1-2.5) ...
Setting up libmd0:armhf (1.0.4-2) ...
Setting up mount (2.38.1-4) ...
Setting up ocl-icd-libopencl1:armhf (2.3.1-1) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up at-spi2-common (2.46.0-4) ...
Setting up libcommons-math-java (2.2-8) ...
Setting up libasan8:armhf (12.2.0-9+rpi1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libxml-commons-external-java (1.4.01-5) ...
Setting up libasound2:armhf (1.2.7.2-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up librole-tiny-perl (2.002004-1) ...
Setting up libopentest4j-java (1.2.0-4) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libthai-data (0.1.29-1) ...
Setting up libssh2-1:armhf (1.10.0-3+b1) ...
Setting up libsub-quote-perl (2.006006-1) ...
Setting up libclass-xsaccessor-perl (1.19-4+b1) ...
Setting up libgtk2.0-common (2.24.33-2) ...
Setting up libatk1.0-0:armhf (2.46.0-4) ...
Setting up libtiff5:armhf (4.4.0-6) ...
Setting up libjam-java (0.1.git20180106.740247a+dfsg-1) ...
Setting up libfile-dirlist-perl (0.05-3) ...
Setting up libjaxp1.3-java (1.3.05-6) ...
Setting up libfile-homedir-perl (1.006-1) ...
Setting up openssl (3.0.7-1) ...
Setting up libbsd0:armhf (0.11.7-1) ...
Setting up libtinfo5:armhf (6.3+20220423-2) ...
Setting up libdrm-common (2.4.114-1+rpi1) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up libcc1-0:armhf (12.2.0-9+rpi1) ...
Setting up liburi-perl (5.17-1) ...
Setting up libfile-touch-perl (0.12-2) ...
Setting up dctrl-tools (2.24-3) ...
Setting up libf2j-java (0.8.1+dfsg-5) ...
Setting up libnet-ssleay-perl:armhf (1.92-2+b2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up libjlapack-java (0.8~dfsg-5) ...
Setting up wdiff (1.2.2-2) ...
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up libice6:armhf (2:1.0.10-1) ...
Setting up libhttp-date-perl (6.05-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.10.1-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-10) ...
Setting up libxcb-xfixes0:armhf (1.15-1) ...
Setting up java-wrappers (0.3) ...
Setting up libfile-listing-perl (6.15-1) ...
Setting up libtool (2.4.7-5) ...
Setting up libxcb-render0:armhf (1.15-1) ...
Setting up fontconfig-config (2.13.1-4.5) ...
Setting up libjdom1-java (1.1.3-2.1) ...
Setting up libxcb-glx0:armhf (1.15-1) ...
Setting up libedit2:armhf (3.1-20221030-2) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libavahi-common3:armhf (0.8-6+b1) ...
Setting up libcommons-logging-java (1.2-3) ...
Setting up libnet-http-perl (6.22-1) ...
Setting up libnss3:armhf (2:3.85-1) ...
Setting up libxcb-shm0:armhf (1.15-1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libdevel-callchecker-perl (0.008-1+b4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libxcb-present0:armhf (1.15-1) ...
Setting up libpython3.10-stdlib:armhf (3.10.8-3) ...
Setting up dh-autoreconf (20) ...
Setting up libthai0:armhf (0.1.29-1) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up liboptions-java (0.0.20120113-3) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-3) ...
Setting up libxcb-sync1:armhf (1.15-1) ...
Setting up libgcc-12-dev:armhf (12.2.0-9+rpi1) ...
Setting up shared-mime-info (2.2-1) ...
Setting up libxcb-dri2-0:armhf (1.15-1) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up libllvm14:armhf (1:14.0.6-2+rpi1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libdrm2:armhf (2.4.114-1+rpi1) ...
Setting up dwz (0.14+20220924-2) ...
Setting up groff-base (1.22.4-9) ...
Setting up libhtml-parser-perl:armhf (3.80-1) ...
Setting up libcurl4:armhf (7.86.0-2) ...
Setting up libx11-6:armhf (2:1.8.1-2) ...
Setting up libharfbuzz0b:armhf (5.2.0-2+b1) ...
Setting up libgdk-pixbuf-2.0-0:armhf (2.42.10+dfsg-1) ...
Setting up ca-certificates-java (20220719) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
done.
Setting up libcommons-codec-java (1.15-1) ...
Setting up libxcomposite1:armhf (1:0.4.5-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libavahi-client3:armhf (0.8-6+b1) ...
Setting up libio-socket-ssl-perl (2.077-1) ...
Setting up libpython3-stdlib:armhf (3.10.6-1) ...
Setting up libhttp-message-perl (6.44-1) ...
Setting up libdrm-amdgpu1:armhf (2.4.114-1+rpi1) ...
Setting up libxcb-dri3-0:armhf (1.15-1) ...
Setting up gtk-update-icon-cache (3.24.35-1) ...
Setting up libx11-xcb1:armhf (2:1.8.1-2) ...
Setting up libhttp-negotiate-perl (6.01-1) ...
Setting up libdrm-nouveau2:armhf (2.4.114-1+rpi1) ...
Setting up libxdamage1:armhf (1:1.1.5-2) ...
Setting up python3.10 (3.10.8-3) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up libstdc++-12-dev:armhf (12.2.0-9+rpi1) ...
Setting up libhttp-cookies-perl (6.10-1) ...
Setting up libcommons-io-java (2.11.0-2) ...
Setting up libdrm-radeon1:armhf (2.4.114-1+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-2) ...
Setting up libparams-classify-perl:armhf (0.015-2+b1) ...
Setting up libgl1-mesa-dri:armhf (22.2.0-1+rpi1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up libxmlgraphics-commons-java (2.7-1) ...
Setting up python3 (3.10.6-1) ...
Setting up man-db (2.11.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libmpj-java (0.44+dfsg-4) ...
Setting up adwaita-icon-theme (43-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up gcc-12 (12.2.0-9+rpi1) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libxfixes3:armhf (1:6.0.0-2) ...
Setting up libxinerama1:armhf (2:1.1.4-3) ...
Setting up libclang-common-14-dev (1:14.0.6-2+rpi1) ...
Setting up libxrandr2:armhf (2:1.5.2-2) ...
Setting up libclang-cpp14 (1:14.0.6-2+rpi1) ...
Setting up libxt6:armhf (1:1.2.1-1) ...
Setting up libcups2:armhf (2.4.2-1+b1) ...
Setting up libclc-14 (1:14.0.6-2+rpi1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up g++-12 (12.2.0-9+rpi1) ...
Setting up mesa-opencl-icd:armhf (22.2.0-1+rpi1) ...
Setting up libglx-mesa0:armhf (22.2.0-1+rpi1) ...
Setting up libxi6:armhf (2:1.8-1) ...
Setting up libglx0:armhf (1.5.0-1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libxtst6:armhf (2:1.2.3-1.1) ...
Setting up libbatik-java (1.16+dfsg-1) ...
Setting up libmoo-perl (2.005004-3) ...
Setting up libxcursor1:armhf (1:1.2.1-1) ...
Setting up libhmsbeagle1v5:armhf (3.1.2+dfsg-12) ...
Setting up debhelper (13.11.1) ...
Setting up libgl1:armhf (1.5.0-1) ...
Setting up libhmsbeagle-java:armhf (3.1.2+dfsg-12) ...
Setting up liblwp-protocol-https-perl (6.10-1) ...
Setting up libwww-perl (6.67-1) ...
Setting up devscripts (2.22.2) ...
Setting up javahelper (0.78) ...
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.13.1-4.5) ...
Setting up fontconfig (2.13.1-4.5) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libtk8.6:armhf (8.6.12-1) ...
Setting up libpango-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libcairo2:armhf (1.16.0-6) ...
Setting up openjdk-17-jre-headless:armhf (17.0.4+8-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libpangoft2-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libpangocairo-1.0-0:armhf (1.50.10+ds-1) ...
Setting up junit4 (4.13.2-3) ...
Setting up default-jre-headless (2:1.17-73) ...
Setting up libgtk2.0-0:armhf (2.24.33-2) ...
Setting up libconcurrent-java (1.3.4-5) ...
Setting up openjdk-17-jdk-headless:armhf (17.0.4+8-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up r-base-core (4.2.2.20221110-1) ...
Creating config file /etc/R/Renviron with new version
Setting up ant (1.10.12-3) ...
Setting up libcolt-free-java (1.2.0+dfsg-7) ...
Setting up junit5 (5.9.1-1) ...
Setting up openjdk-17-jre:armhf (17.0.4+8-1+rpi1) ...
Setting up default-jre (2:1.17-73) ...
Setting up openjdk-17-jdk:armhf (17.0.4+8-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up ant-optional (1.10.12-3) ...
Setting up default-jdk-headless (2:1.17-73) ...
Setting up r-cran-rjava (1.0-6-1) ...
Setting up libejml-java (0.41+ds-2) ...
Setting up default-jdk (2:1.17-73) ...
Setting up figtree (1.4.4-5) ...
Setting up sbuild-build-depends-beast-mcmc-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for ca-certificates-java (20220719) ...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39-6+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-9+rpi1 gcc-12_12.2.0-9+rpi1 libc6-dev_2.35-2+rpi1 libstdc++-12-dev_12.2.0-9+rpi1 libstdc++6_12.2.0-9+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 adwaita-icon-theme_43-1 ant_1.10.12-3 ant-optional_1.10.12-3 apt_2.5.3 at-spi2-common_2.46.0-4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-6+rpi1 binutils-arm-linux-gnueabihf_2.39-6+rpi1 binutils-common_2.39-6+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 ca-certificates-java_20220719 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-9+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 dctrl-tools_2.24-3 debconf_1.5.79 debhelper_13.11.1 debianutils_5.7-0.3 default-jdk_2:1.17-73 default-jdk-headless_2:1.17-73 default-jre_2:1.17-73 default-jre-headless_2:1.17-73 devscripts_2.22.2 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dirmngr_2.2.39-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 figtree_1.4.4-5 file_1:5.41-4 findutils_4.9.0-3 fontconfig_2.13.1-4.5 fontconfig-config_2.13.1-4.5 fonts-dejavu-core_2.37-2 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-9+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-9+rpi1 gcc-12-base_12.2.0-9+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-9 gtk-update-icon-cache_3.24.35-1 gzip_1.12-1 hicolor-icon-theme_0.17-2 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20211215-1 java-common_0.73 java-wrappers_0.3 javahelper_0.78 junit4_4.13.2-3 junit5_5.9.1-1 krb5-locales_1.20-1 libacl1_2.3.1-1 libactivation-java_1.2.0-2 libapache-pom-java_25-2 libapiguardian-java_1.1.2-1 libapt-pkg6.0_2.5.3 libarchive-zip-perl_1.68-1 libasan8_12.2.0-9+rpi1 libasound2_1.2.7.2-1 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libfontconfig1_2.13.1-4.5 libfreetype6_2.12.1+dfsg-3 libfribidi0_1.0.8-2.1 libgcc-12-dev_12.2.0-9+rpi1 libgcc-s1_12.2.0-9+rpi1 libgcrypt20_1.10.1-2+b2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgdk-pixbuf-2.0-0_2.42.10+dfsg-1 libgdk-pixbuf2.0-common_2.42.10+dfsg-1 libgeronimo-annotation-1.3-spec-java_1.3-1 libgfortran5_12.2.0-9+rpi1 libgif7_5.2.1-2.5 libgl1_1.5.0-1 libgl1-mesa-dri_22.2.0-1+rpi1 libglapi-mesa_22.2.0-1+rpi1 libglib2.0-0_2.74.1-2 libglvnd0_1.5.0-1 libglx-mesa0_22.2.0-1+rpi1 libglx0_1.5.0-1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-2 libgomp1_12.2.0-9+rpi1 libgpg-error0_1.45-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20-1 libgtk2.0-0_2.24.33-2 libgtk2.0-common_2.24.33-2 libhamcrest-java_2.2-1 libharfbuzz0b_5.2.0-2+b1 libhmsbeagle-java_3.1.2+dfsg-12 libhmsbeagle1v5_3.1.2+dfsg-12 libhogweed6_3.8.1-2 libhtml-parser-perl_3.80-1 libhtml-tagset-perl_3.20-6 libhtml-tree-perl_5.07-2 libhttp-cookies-perl_6.10-1 libhttp-date-perl_6.05-2 libhttp-message-perl_6.44-1 libhttp-negotiate-perl_6.01-1 libice6_2:1.0.10-1 libicu72_72.1-3 libidn2-0_2.3.3-1 libimport-into-perl_1.002005-2 libio-html-perl_1.004-3 libio-pty-perl_1:1.15-2+b2 libio-socket-ssl-perl_2.077-1 libipc-run-perl_20220807.0-1 libisl23_0.25-1 libitext1-java_1.4-7 libitext5-java_5.5.13.3-1 libjam-java_0.1.git20180106.740247a+dfsg-1 libjaxen-java_1.1.6-4 libjaxp1.3-java_1.3.05-6 libjbig0_2.1-3.1+b2 libjdom1-java_1.1.3-2.1 libjebl2-java_0.1+git20201011.969bd4b-1 libjetbrains-annotations-java_23.0.0-1 libjlapack-java_0.8~dfsg-5 libjpeg62-turbo_1:2.1.2-1 libjsr305-java_0.1~+svn49-11 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 liblapack3_3.10.1-2 liblcms2-2_2.13.1-1 libldap-2.5-0_2.5.13+dfsg-2+rpi1 liblerc4_4.0.0+ds-2 libllvm14_1:14.0.6-2+rpi1 liblog4j1.2-java_1.2.17-11 liblombok-java_1.18.24-1 liblwp-mediatypes-perl_6.04-1 liblwp-protocol-https-perl_6.10-1 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 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libtool_2.4.7-5 libtry-tiny-perl_0.31-2 libubsan1_12.2.0-9+rpi1 libuchardet0_0.0.7-1 libudev1_251.5-1+rpi1 libunistring2_1.0-2 libunivocity-parsers-java_2.9.1-1 liburi-perl_5.17-1 libuuid1_2.38.1-4 libwebp7_1.2.2-2+b1 libwww-perl_6.67-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.8.1-2 libx11-data_2:1.8.1-2 libx11-xcb1_2:1.8.1-2 libxau6_1:1.0.9-1 libxcb-dri2-0_1.15-1 libxcb-dri3-0_1.15-1 libxcb-glx0_1.15-1 libxcb-present0_1.15-1 libxcb-render0_1.15-1 libxcb-shm0_1.15-1 libxcb-sync1_1.15-1 libxcb-xfixes0_1.15-1 libxcb1_1.15-1 libxcomposite1_1:0.4.5-1 libxcursor1_1:1.2.1-1 libxdamage1_1:1.1.5-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxfixes3_1:6.0.0-2 libxft2_2.3.6-1 libxi6_2:1.8-1 libxinerama1_2:1.1.4-3 libxml-commons-external-java_1.4.01-5 libxml2_2.9.14+dfsg-1.1 libxmlgraphics-commons-java_2.7-1 libxrandr2_2:1.5.2-2 libxrender1_1:0.9.10-1.1 libxshmfence1_1.3-1 libxss1_1:1.2.3-1 libxt6_1:1.2.1-1 libxtst6_2:1.2.3-1.1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.1-1 libz3-4_4.8.12-3 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.12.3+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mesa-opencl-icd_22.2.0-1+rpi1 mount_2.38.1-4 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.3 ocl-icd-libopencl1_2.3.1-1 openjdk-17-jdk_17.0.4+8-1+rpi1 openjdk-17-jdk-headless_17.0.4+8-1+rpi1 openjdk-17-jre_17.0.4+8-1+rpi1 openjdk-17-jre-headless_17.0.4+8-1+rpi1 openssl_3.0.7-1 passwd_1:4.12.3+dfsg1-1 patch_2.7.6-7 patchutils_0.4.2-1 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 perl-openssl-defaults_7+b1 pinentry-curses_1.2.0-2 po-debconf_1.0.21+nmu1 python3_3.10.6-1 python3-minimal_3.10.6-1 python3.10_3.10.8-3 python3.10-minimal_3.10.8-3 r-base-core_4.2.2.20221110-1 r-cran-rjava_1.0-6-1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-beast-mcmc-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 shared-mime-info_2.2-1 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022d-1 ucf_3.0043 unzip_6.0-27 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 wdiff_1.2.2-2 x11-common_1:7.7+23 xdg-utils_1.1.3-4.1 xz-utils_5.2.5-2.1 zip_3.0-12 zlib1g_1:1.2.11.dfsg-4.1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.A5XRNO33/trustedkeys.kbx': General error
gpgv: Signature made Thu Nov 24 07:43:06 2022 UTC
gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv: issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./beast-mcmc_1.10.4+dfsg-5.dsc
dpkg-source: info: extracting beast-mcmc in /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg
dpkg-source: info: unpacking beast-mcmc_1.10.4+dfsg.orig.tar.xz
dpkg-source: info: unpacking beast-mcmc_1.10.4+dfsg-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying enable_hardening.patch
dpkg-source: info: applying fix_classpath_in_build_xml.patch
dpkg-source: info: applying create_soname.patch
dpkg-source: info: applying fix_encoding.patch
dpkg-source: info: applying ignore_mac_install.patch
dpkg-source: info: applying update-ejml.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-67f0500a-ac76-4203-978a-30e56cc35561
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package beast-mcmc
dpkg-buildpackage: info: source version 1.10.4+dfsg-5
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with javahelper
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg'
rm -f native/*\.o native/*\.so native/*\.so\.*
ant clean
Buildfile: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build.xml
clean:
BUILD SUCCESSFUL
Total time: 1 second
make[1]: Leaving directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg'
jh_clean
dh_clean
debian/rules binary-arch
dh binary-arch --with javahelper
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
jh_linkjars -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg'
# CLASSPATH=/usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/share/ant/lib/ant-nodeps.jar:/usr/share/ant/lib/ant-junit.jar:/usr/lib/jvm/default-java/lib/tools.jar:/usr/share/java/beagle.jar:/usr/share/java/mpj.jar:/usr/share/java/org.boehn.kmlframework.jar:/usr/share/java/itext1-1.4.jar:/usr/share/java/junit4.jar:/usr/share/java/figtree.jar:lib/colt.jar:/usr/share/java/options.jar:/usr/share/java/mtj.jar:/usr/share/java/jam.jar:/usr/share/java/jdom1.jar:/usr/share/java/jebl.jar:/usr/share/java/commons-math.jar:/usr/share/java/EJML.jar:/usr/share/java/jlapack-lapack.jar:/usr/lib/R/site-library/rJava/jri/JRI.jar
mkdir -p lib
ant build
Buildfile: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build.xml
init:
[echo] BEAST: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build.xml
compile-all:
[mkdir] Created dir: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build.xml:102: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
[javac] Using javac -source 1.6 is no longer supported, switching to 7
[javac] Using javac -target 1.6 is no longer supported, switching to 7
[javac] Compiling 2503 source files to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build
[javac] warning: [options] bootstrap class path not set in conjunction with -source 7
[javac] warning: [options] source value 7 is obsolete and will be removed in a future release
[javac] warning: [options] target value 7 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beauti/BeautiApp.java:37: warning: [removal] AccessControlException in java.security has been deprecated and marked for removal
[javac] import java.security.AccessControlException;
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beauti/BeautiApp.java:37: warning: [removal] AccessControlException in java.security has been deprecated and marked for removal
[javac] import java.security.AccessControlException;
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beauti/BeautiApp.java:37: warning: [removal] AccessControlException in java.security has been deprecated and marked for removal
[javac] import java.security.AccessControlException;
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beauti/BeautiApp.java:37: warning: [removal] AccessControlException in java.security has been deprecated and marked for removal
[javac] import java.security.AccessControlException;
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beauti/BeautiApp.java:37: warning: [removal] AccessControlException in java.security has been deprecated and marked for removal
[javac] import java.security.AccessControlException;
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/xml/XMLObject.java:381: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] d = new Double(token);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/xml/XMLObject.java:399: warning: [removal] Integer(String) in Integer has been deprecated and marked for removal
[javac] Integer d = new Integer(st.nextToken());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/gui/components/WholeNumberField.java:118: warning: [removal] Integer(String) in Integer has been deprecated and marked for removal
[javac] return new Integer(getText());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/gui/components/WholeNumberField.java:126: warning: [removal] Long(String) in Long has been deprecated and marked for removal
[javac] return new Long(getText());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beast/RBeastMain.java:43: warning: [removal] SecurityManager in java.lang has been deprecated and marked for removal
[javac] final SecurityManager securityManager = new SecurityManager() {
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beast/RBeastMain.java:43: warning: [removal] SecurityManager in java.lang has been deprecated and marked for removal
[javac] final SecurityManager securityManager = new SecurityManager() {
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beast/RBeastMain.java:51: warning: [removal] setSecurityManager(SecurityManager) in System has been deprecated and marked for removal
[javac] System.setSecurityManager(securityManager);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/beast/RBeastMain.java:55: warning: [removal] setSecurityManager(SecurityManager) in System has been deprecated and marked for removal
[javac] System.setSecurityManager(null);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/io/NexusImporter.java:961: warning: [removal] Float(String) in Float has been deprecated and marked for removal
[javac] final Float value = new Float(c.substring(2, e));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/io/NexusImporter.java:1433: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] return new Double(value);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/gui/components/RealNumberField.java:230: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] return new Double(getText());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/gui/FileDrop.java:458: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
[javac] supportsDnD = new Boolean( support );
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/realtime/DistanceMatrixInsertionTest.java:133: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] data[i][j] = new Double(matrix.getElement(i, j-1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/tools/MixtureModelLogAnalyser.java:149: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] hash.put(split[discreteVariableIndex], new Integer(hash.get(split[discreteVariableIndex]) + 1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/tools/MixtureModelLogAnalyser.java:152: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] hash.put(split[discreteVariableIndex], new Integer(1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/app/tools/TreeAnnotator.java:914: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] freq[index] = new Double(values.get(key));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/alignment/GapUtils.java:54: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] gaps.add(new Integer(i-gapStart));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/coalescent/structure/Event.java:94: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] return new Double(time).compareTo(e2.time);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/colouring/StructuredColourSampler.java:146: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double height = new Double(tree.getNodeHeight(node));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/parsimony/Parsimony.java:159: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] ((MutableTree)tree).setNodeAttribute(node, attributeName, new Integer(state));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/parsimony/Parsimony.java:261: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] ((MutableTree)tree).setNodeAttribute(node, "r"+attributeName, new Integer(state));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evolution/parsimony/SankoffParsimony.java:199: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] observedStates.add(new Integer(k));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/speciation/SpeciesTreeModel.java:932: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] sTree.setAttribute("check", new Double(rootHeight));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/inference/model/MatrixParameter.java:217: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] double datum = new Double(st.nextToken());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/AntigenicLikelihood.java:324: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double offset = strainDates.get(i) - new Double(earliest);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/TreeClusteringVirusesPrior.java:792: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] causalList[curNode].add(new Integer(0));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/TreeClusteringVirusesPrior.java:869: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] causalList[curNode].add(new Integer(bits[i]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/AGLikelihoodCluster.java:343: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double offset = strainDates.get(i) - new Double(earliest);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/AGLikelihoodTreeCluster.java:433: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double offset = strainDates.get(i) - new Double(earliest);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterGibbsOperator.java:217: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] nodeLevel.add(new Integer(0));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterGibbsOperator.java:231: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] nodeLevel.add(new Integer(nodeLevel.getFirst()+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterGibbsOperator.java:244: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] nodeLevel.add(new Integer(nodeLevel.getFirst()+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterGibbsOperator.java:266: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities.addLast(new Integer( site_test));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:859: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] if(m.get(new Integer(clusterLabel[i])) == null ){
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:861: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(oldclusterLabel[i]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:861: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(oldclusterLabel[i]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:866: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(maxOldLabel));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:866: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(maxOldLabel));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:871: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] clusterLabel[i] = m.get(new Integer( clusterLabel[i])).intValue();
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:1151: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(cutNodes[i]), new Integer(i+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:1151: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(cutNodes[i]), new Integer(i+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/misc/obsolete/TreeClusterSequentialSampling.java:1196: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] membership[ curElement.getNumber()] = m.get(new Integer( curElement.getNumber()));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:493: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities1.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:542: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities2.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:560: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] jointPossibilities.addLast(new Integer(nodeNumber));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:569: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] jointPossibilities.addLast(new Integer(nodeNumber));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:889: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities1.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:933: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities2.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:970: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities1.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:1014: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities2.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:1173: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities1.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:1255: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities1.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:1364: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities1.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:1391: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] possibilities2.addLast(new Integer(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2307: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] if(m.get(new Integer(clusterLabel[i])) == null ){
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2309: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(oldclusterLabel[i]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2309: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(oldclusterLabel[i]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2318: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(maxOldLabel));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2318: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(clusterLabel[i]), new Integer(maxOldLabel));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2323: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] clusterLabel[i] = m.get(new Integer( clusterLabel[i])).intValue();
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2586: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] nodeLevel.add(new Integer(0));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2601: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] nodeLevel.add(new Integer(nodeLevel.getFirst()+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2614: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] nodeLevel.add(new Integer(nodeLevel.getFirst()+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2903: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(cutNodes[i]), new Integer(i+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2903: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] m.put(new Integer(cutNodes[i]), new Integer(i+1));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/operators/TreeClusterAlgorithmOperator.java:2948: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] membership[ curElement.getNumber()] = m.get(new Integer( curElement.getNumber()));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/antigenic/phyloclustering/statistics/ActiveIndicatorsStatistic.java:45: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] activeNodes.addLast(new Double(i));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/arg/ARGTraceAnalysis.java:144: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] meanTree.setNodeAttribute(node1, "upper", new Double(dr.stats.DiscreteStatistics.quantile(0.975, heights)));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/arg/ARGTraceAnalysis.java:145: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] meanTree.setNodeAttribute(node1, "lower", new Double(dr.stats.DiscreteStatistics.quantile(0.025, heights)));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/continuous/SampledMultivariateTraitLikelihood.java:146: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] if (new Double(logL).isNaN()) {
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/continuous/SampledMultivariateTraitLikelihood.java:168: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] if (new Double(logL).isNaN()) {
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/coalescent/GaussianProcessSkytrackParser.java:86: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] lambdas.add(new Double(fieldsArray[lambdaBoundIndex]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/coalescent/GaussianProcessSkytrackParser.java:87: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] precisions.add(new Double(fieldsArray[precisionIndex]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/coalescent/GaussianProcessSkytrackParser.java:88: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] tmrcas.add(new Double(fieldsArray[tmrcaIndex]));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/coalescent/GaussianProcessSkytrackParser.java:235: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] vals.add(new Double(valStr));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodelxml/treelikelihood/TreeTraitParserUtilities.java:365: warning: [removal] Double(String) in Double has been deprecated and marked for removal
[javac] value = new Double(oneValue);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodelxml/treelikelihood/TreeTraitParserUtilities.java:413: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] if ((new Double(allValues[i])).isNaN()) {
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/continuous/SimulateTrait.java:78: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] tree.setNodeAttribute(node, traitName, new Double(value));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:58: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double tD = new Double(t);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:59: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double vD = new Double(v);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:90: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double tD = new Double(t.doubleValue());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:95: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double vD = new Double(v.doubleValue());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:108: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double tD = new Double(t.doubleValue());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:113: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double vD = new Double(v.doubleValue());
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:142: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] Double tD = new Double(t);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:175: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] int index = Collections.binarySearch(times, new Double(start));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/epidemiology/DynamicalVariable.java:182: warning: [removal] Double(double) in Double has been deprecated and marked for removal
[javac] index = Collections.binarySearch(times, new Double(finish));
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/tree/HiddenLinkageLogger.java:55: warning: [removal] Long(long) in Long has been deprecated and marked for removal
[javac] values[0] = new Long(state).toString();
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/tree/HiddenLinkageLogger.java:57: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
[javac] values[i] = new Integer(hlm.getLinkageGroupId(hlm.getData().getReadsTaxa().getTaxon(i-1))).toString();
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/treedatalikelihood/continuous/cdi/MultivariateIntegrator.java:534: warning: [removal] Long(long) in Long has been deprecated and marked for removal
[javac] total = new Long(0);
[javac] ^
[javac] /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/src/dr/evomodel/treelikelihood/utilities/CompleteHistoryLogger.java:165: warning: [removal] Integer(String) in Integer has been deprecated and marked for removal
[javac] return new Integer(value);
[javac] ^
[javac] Note: Some input files use or override a deprecated API.
[javac] Note: Recompile with -Xlint:deprecation for details.
[javac] Note: Some input files additionally use or override a deprecated API that is marked for removal.
[javac] Note: Some input files use unchecked or unsafe operations.
[javac] Note: Recompile with -Xlint:unchecked for details.
[javac] 100 warnings
[javac] only showing the first 100 warnings, of 101 total; use -Xmaxwarns if you would like to see more
[javac] Creating empty /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build/dr/evomodel/alloppnet/package-info.class
[echo] Successfully compiled.
dist:
[mkdir] Created dir: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build/dist
[jar] Building jar: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build/dist/beast.jar
[jar] Building jar: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build/dist/beauti.jar
[jar] Building jar: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/build/dist/trace.jar
linux:
[mkdir] Created dir: /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4
[copy] Copying 6 files to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/bin
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/doc
[copy] Copying 158 files to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/examples
[copy] Copying 18 files to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/native
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/images
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/images
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/images
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/lib
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4/lib
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4
[copy] Copying 1 file to /<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/release/Linux/BEASTv1.10.4
[echo] Have to tar manaully, because [ANT Bug 550] the tar task change the mode of the executables files.
[echo] Linux/Unix version release is finished.
build:
BUILD SUCCESSFUL
Total time: 2 minutes 38 seconds
# FIXME: There is no such file build_tracer.xml any more
# ant -buildfile build_tracer.xml dist
# native/compileNativeLinux.sh does not create dynamic libraries
cd native ; /usr/bin/make -f Makefile.linux JAVA_HOME=/usr/lib/jvm/default-java
make[2]: Entering directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/native'
gcc -O2 -funroll-loops -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux -c NucleotideLikelihoodCore.c
gcc -O2 -funroll-loops -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux -shared -Wl,-soname,libNucleotideLikelihoodCore.so.0 -o libNucleotideLikelihoodCore.so.0 NucleotideLikelihoodCore.o
make[2]: Leaving directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg/native'
make[1]: Leaving directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg'
#####################################################################
## Run test suite ##
## -------------- ##
## While this test suite runs quite a bit of time (about 30min) it ##
## is recommended to be run at least once per new version upload ##
#####################################################################
#
# /usr/lib/jvm/default-java/bin/java -classpath /usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/share/ant/lib/ant-nodeps.jar:/usr/share/ant/lib/ant-junit.jar:/usr/lib/jvm/default-java/lib/tools.jar:/usr/share/java/beagle.jar:/usr/share/java/mpj.jar:/usr/share/java/org.boehn.kmlframework.jar:/usr/share/java/itext1-1.4.jar:/usr/share/java/junit4.jar:/usr/share/java/figtree.jar:lib/colt.jar:/usr/share/java/options.jar:/usr/share/java/mtj.jar:/usr/share/java/jam.jar:/usr/share/java/jdom1.jar:/usr/share/java/jebl.jar:/usr/share/java/commons-math.jar:/usr/share/java/EJML.jar:/usr/share/java/jlapack-lapack.jar:/usr/lib/R/site-library/rJava/jri/JRI.jar -Dant.home=/usr/share/ant org.apache.tools.ant.Main -Dcompile.debug=true -Dcompile.optimize=true -buildfile build.xml junit
make[1]: Leaving directory '/<<BUILDDIR>>/beast-mcmc-1.10.4+dfsg'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install -a
dh_install -a
jh_installjavadoc -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
jh_installlibs -a
jh_classpath -a
jh_manifest -a
jh_depends -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dwz: debian/libnucleotidelikelihoodcore0/usr/lib/libNucleotideLikelihoodCore.so.0: .debug_info section not present
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libnucleotidelikelihoodcore0: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Depends field of package libnucleotidelikelihoodcore0: substitution variable ${shlibs:Depends} used, but is not defined
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libnucleotidelikelihoodcore0' in '../libnucleotidelikelihoodcore0_1.10.4+dfsg-5_armhf.deb'.
dpkg-deb: building package 'libnucleotidelikelihoodcore0-dbgsym' in '../libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-5_armhf.deb'.
dpkg-genbuildinfo --build=any -O../beast-mcmc_1.10.4+dfsg-5_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../beast-mcmc_1.10.4+dfsg-5_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-11-29T04:55:18Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
beast-mcmc_1.10.4+dfsg-5_armhf.changes:
---------------------------------------
Format: 1.8
Date: Thu, 24 Nov 2022 02:40:16 -0500
Source: beast-mcmc
Binary: libnucleotidelikelihoodcore0 libnucleotidelikelihoodcore0-dbgsym
Architecture: armhf
Version: 1.10.4+dfsg-5
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andrius Merkys <merkys@debian.org>
Description:
libnucleotidelikelihoodcore0 - implementation of LikelihoodCore for nucleotides used by beast-mc
Changes:
beast-mcmc (1.10.4+dfsg-5) unstable; urgency=medium
.
* Team upload.
* Refresh ignore_mac_install.patch.
* Adjust update-ejml.patch to build with libejml-java 0.41.
Checksums-Sha1:
a382fdcae32d4d0c7fe8ad02121be169943752dc 13356 beast-mcmc_1.10.4+dfsg-5_armhf.buildinfo
4c22fb23f1deece57e21537dcb9781cefa973a6d 2208 libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-5_armhf.deb
9f29b4f12e1aba7b19cf38b43bbb4f8092a3e3df 6724 libnucleotidelikelihoodcore0_1.10.4+dfsg-5_armhf.deb
Checksums-Sha256:
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e043b9fe361c9d78ca347ec8051b677464c19e0d7cfd96af9eec56fd7f6823a5 2208 libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-5_armhf.deb
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Files:
6051f7afd510ba1156e5bb87a5873296 13356 science optional beast-mcmc_1.10.4+dfsg-5_armhf.buildinfo
1e9906d7dd611b08b5bbf3d9c4087acd 2208 debug optional libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-5_armhf.deb
ae575639794f71d63b31216b37e406fc 6724 libs optional libnucleotidelikelihoodcore0_1.10.4+dfsg-5_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-5_armhf.deb
-----------------------------------------------------------
new Debian package, version 2.0.
size 2208 bytes: control archive=560 bytes.
447 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: libnucleotidelikelihoodcore0-dbgsym
Source: beast-mcmc
Version: 1.10.4+dfsg-5
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 14
Depends: libnucleotidelikelihoodcore0 (= 1.10.4+dfsg-5)
Section: debug
Priority: optional
Description: debug symbols for libnucleotidelikelihoodcore0
Build-Ids: 334f1abe2acedc191d99577f2091ac731cbc65d4
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libnucleotidelikelihoodcore0_1.10.4+dfsg-5_armhf.deb
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new Debian package, version 2.0.
size 6724 bytes: control archive=1156 bytes.
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Package: libnucleotidelikelihoodcore0
Source: beast-mcmc
Version: 1.10.4+dfsg-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 79
Conflicts: beast-mcmc-lib
Replaces: beast-mcmc-lib
Provides: beast-mcmc-lib
Section: libs
Priority: optional
Homepage: http://beast.bio.ed.ac.uk/
Description: implementation of LikelihoodCore for nucleotides used by beast-mcmc
BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
sequences. It is entirely orientated towards rooted, time-measured
phylogenies inferred using strict or relaxed molecular clock models. It
can be used as a method of reconstructing phylogenies but is also a
framework for testing evolutionary hypotheses without conditioning on a
single tree topology. BEAST uses MCMC to average over tree space, so that
each tree is weighted proportional to its posterior probability. Included
is a simple to use user-interface program for setting up standard
analyses and a suit of programs for analysing the results.
.
This package provides an implementation of LikelihoodCore for nucleotides
that calls native methods for maximum speed.
drwxr-xr-x root/root 0 2022-11-24 07:40 ./
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drwxr-xr-x root/root 0 2022-11-24 07:40 ./usr/lib/
-rw-r--r-- root/root 66748 2022-11-24 07:40 ./usr/lib/libNucleotideLikelihoodCore.so.0
drwxr-xr-x root/root 0 2022-11-24 07:40 ./usr/share/
drwxr-xr-x root/root 0 2022-11-24 07:40 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-11-24 07:40 ./usr/share/doc/libnucleotidelikelihoodcore0/
-rw-r--r-- root/root 682 2022-11-24 07:40 ./usr/share/doc/libnucleotidelikelihoodcore0/changelog.Debian.gz
-rw-r--r-- root/root 2367 2022-11-24 07:33 ./usr/share/doc/libnucleotidelikelihoodcore0/copyright
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Build Architecture: armhf
Build-Space: 100440
Build-Time: 176
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 801
Job: beast-mcmc_1.10.4+dfsg-5
Machine Architecture: armhf
Package: beast-mcmc
Package-Time: 998
Source-Version: 1.10.4+dfsg-5
Space: 100440
Status: successful
Version: 1.10.4+dfsg-5
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Finished at 2022-11-29T04:55:18Z
Build needed 00:16:38, 100440k disk space