bamtools →
2.4.1+dfsg-1 →
armhf → 2017-01-24 05:01:50
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd.raspbian.org
+==============================================================================+
| bamtools 2.4.1+dfsg-1 (armhf) Tue, 24 Jan 2017 04:45:06 +0000 |
+==============================================================================+
Package: bamtools
Version: 2.4.1+dfsg-1
Source Version: 2.4.1+dfsg-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-0bb08b42-718e-4c94-affb-fb62af972943' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9731 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.7 MB]
Fetched 21.4 MB in 26s (822 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'bamtools' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/bamtools.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/bamtools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 215 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main bamtools 2.4.1+dfsg-1 (dsc) [2384 B]
Get:2 http://172.17.0.1/private stretch-staging/main bamtools 2.4.1+dfsg-1 (tar) [202 kB]
Get:3 http://172.17.0.1/private stretch-staging/main bamtools 2.4.1+dfsg-1 (diff) [11.0 kB]
Fetched 215 kB in 0s (1278 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/bamtools-EWMFw2/bamtools-2.4.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/bamtools-EWMFw2' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-BuQJ2w/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-BuQJ2w/gpg/trustdb.gpg: trustdb created
gpg: key 5FBC947B34E39F26: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 5FBC947B34E39F26: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 5FBC947B34E39F26: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Packages [430 B]
Fetched 2106 B in 0s (3182 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n libfuse2 manpages
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 62 not upgraded.
Need to get 770 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [770 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 770 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12988 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), d-shlibs (>= 0.56), cmake, zlib1g-dev, libjsoncpp-dev, help2man, doxygen
Filtered Build-Depends: debhelper (>= 10), d-shlibs (>= 0.56), cmake, zlib1g-dev, libjsoncpp-dev, help2man, doxygen
dpkg-deb: building package 'sbuild-build-depends-bamtools-dummy' in '/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive/sbuild-build-depends-bamtools-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-bamtools-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Sources [535 B]
Get:5 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ Packages [613 B]
Fetched 2481 B in 0s (4065 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install bamtools build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n libfuse2 manpages
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen file
gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libarchive13 libbsd0 libclang1-3.8 libcroco3 libcurl3 libedit2 libexpat1
libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30
libgssapi-krb5-2 libhogweed4 libicu57 libidn2-0 libjsoncpp-dev libjsoncpp1
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2
libldap-common libllvm3.8 liblocale-gettext-perl liblzo2-2 libmagic-mgc
libmagic1 libnettle6 libnghttp2-14 libp11-kit0 libpipeline1 libpsl5 librtmp1
libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.0.2 libtasn1-6
libtimedate-perl libtool libunistring0 libuv1 libxml2 m4 man-db po-debconf
zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation codeblocks eclipse ninja-build dh-make doxygen-latex doxygen-doc
doxygen-gui graphviz gettext-doc libasprintf-dev libgettextpo-dev groff
lrzip gnutls-bin krb5-doc krb5-user libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur ca-certificates libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales publicsuffix libsasl2-modules libltdl-dev
xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen file
gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libarchive13 libbsd0 libclang1-3.8 libcroco3 libcurl3 libedit2 libexpat1
libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30
libgssapi-krb5-2 libhogweed4 libicu57 libidn2-0 libjsoncpp-dev libjsoncpp1
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2
libldap-common libllvm3.8 liblocale-gettext-perl liblzo2-2 libmagic-mgc
libmagic1 libnettle6 libnghttp2-14 libp11-kit0 libpipeline1 libpsl5 librtmp1
libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.0.2 libtasn1-6
libtimedate-perl libtool libunistring0 libuv1 libxml2 m4 man-db po-debconf
sbuild-build-depends-bamtools-dummy zlib1g-dev
The following packages will be upgraded:
zlib1g
1 upgraded, 69 newly installed, 0 to remove and 61 not upgraded.
Need to get 41.8 MB/43.1 MB of archives.
After this operation, 158 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-BuQJ2w/apt_archive ./ sbuild-build-depends-bamtools-dummy 0.invalid.0 [824 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf liblocale-gettext-perl armhf 1.07-3+b1 [18.3 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.12 [178 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf zlib1g armhf 1:1.2.8.dfsg-4 [81.6 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf cmake-data all 3.7.1-1 [1216 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libicu57 armhf 57.1-5 [7427 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2.1 [804 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libarchive13 armhf 3.2.1-5 [252 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.15-1 [57.9 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.15-1 [115 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.15-1 [262 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.15-1 [132 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libidn2-0 armhf 0.14-1 [58.3 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.3-2 [94.4 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.5.8-1 [823 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.27~101-g0780600+dfsg-2 [66.8 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.27~101-g0780600+dfsg-2 [98.0 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libldap-common all 2.4.44+dfsg-3 [84.5 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.44+dfsg-3 [194 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.17.0-1 [70.1 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libpsl5 armhf 0.16.1-1 [41.2 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.7.0-1 [125 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libcurl3 armhf 7.52.1-1 [260 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.2.0-2 [62.2 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libjsoncpp1 armhf 1.7.4-3 [66.2 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libuv1 armhf 1.9.1-3 [73.2 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf cmake armhf 3.7.1-1 [2400 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.29-2 [221 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.29-2 [104 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.29-2 [63.1 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libedit2 armhf 3.1-20160903-2 [68.7 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-5 [733 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf d-shlibs all 0.79 [19.1 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 13 [15.8 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.029-2 [15.3 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.029-2 [9330 B]
Get:54 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.50.2-2 [2527 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-2 [131 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf debhelper all 10.2.3 [829 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf libllvm3.8 armhf 1:3.8.1-13+rpi1 [8879 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf libclang1-3.8 armhf 1:3.8.1-13+rpi1 [3365 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf doxygen armhf 1.8.12-1+rpi1 [3258 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf help2man armhf 1.47.4 [162 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-4 [198 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libjsoncpp-dev armhf 1.7.4-3 [78.6 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 41.8 MB in 13s (3028 kB/s)
Selecting previously unselected package liblocale-gettext-perl.
(Reading database ... 12988 files and directories currently installed.)
Preparing to unpack .../0-liblocale-gettext-perl_1.07-3+b1_armhf.deb ...
Unpacking liblocale-gettext-perl (1.07-3+b1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../1-groff-base_1.22.3-9_armhf.deb ...
Unpacking groff-base (1.22.3-9) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../2-libbsd0_0.8.3-1_armhf.deb ...
Unpacking libbsd0:armhf (0.8.3-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../3-bsdmainutils_9.0.12_armhf.deb ...
Unpacking bsdmainutils (9.0.12) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../4-libpipeline1_1.4.1-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.4.1-2) ...
Preparing to unpack .../5-zlib1g_1%3a1.2.8.dfsg-4_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.8.dfsg-4) over (1:1.2.8.dfsg-2+b1) ...
Setting up zlib1g:armhf (1:1.2.8.dfsg-4) ...
Selecting previously unselected package man-db.
(Reading database ... 13315 files and directories currently installed.)
Preparing to unpack .../00-man-db_2.7.6.1-2_armhf.deb ...
Unpacking man-db (2.7.6.1-2) ...
Selecting previously unselected package cmake-data.
Preparing to unpack .../01-cmake-data_3.7.1-1_all.deb ...
Unpacking cmake-data (3.7.1-1) ...
Selecting previously unselected package liblzo2-2:armhf.
Preparing to unpack .../02-liblzo2-2_2.08-1.2_armhf.deb ...
Unpacking liblzo2-2:armhf (2.08-1.2) ...
Selecting previously unselected package libnettle6:armhf.
Preparing to unpack .../03-libnettle6_3.3-1_armhf.deb ...
Unpacking libnettle6:armhf (3.3-1) ...
Selecting previously unselected package libicu57:armhf.
Preparing to unpack .../04-libicu57_57.1-5_armhf.deb ...
Unpacking libicu57:armhf (57.1-5) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../05-libxml2_2.9.4+dfsg1-2.1_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-2.1) ...
Selecting previously unselected package libarchive13:armhf.
Preparing to unpack .../06-libarchive13_3.2.1-5_armhf.deb ...
Unpacking libarchive13:armhf (3.2.1-5) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../07-libkeyutils1_1.5.9-9_armhf.deb ...
Unpacking libkeyutils1:armhf (1.5.9-9) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../08-libkrb5support0_1.15-1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.15-1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../09-libk5crypto3_1.15-1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.15-1) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../10-libkrb5-3_1.15-1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.15-1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../11-libgssapi-krb5-2_1.15-1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.15-1) ...
Selecting previously unselected package libunistring0:armhf.
Preparing to unpack .../12-libunistring0_0.9.6+really0.9.3-0.1_armhf.deb ...
Unpacking libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Selecting previously unselected package libidn2-0:armhf.
Preparing to unpack .../13-libidn2-0_0.14-1_armhf.deb ...
Unpacking libidn2-0:armhf (0.14-1) ...
Selecting previously unselected package libhogweed4:armhf.
Preparing to unpack .../14-libhogweed4_3.3-1_armhf.deb ...
Unpacking libhogweed4:armhf (3.3-1) ...
Selecting previously unselected package libffi6:armhf.
Preparing to unpack .../15-libffi6_3.2.1-6_armhf.deb ...
Unpacking libffi6:armhf (3.2.1-6) ...
Selecting previously unselected package libp11-kit0:armhf.
Preparing to unpack .../16-libp11-kit0_0.23.3-2_armhf.deb ...
Unpacking libp11-kit0:armhf (0.23.3-2) ...
Selecting previously unselected package libtasn1-6:armhf.
Preparing to unpack .../17-libtasn1-6_4.9-4_armhf.deb ...
Unpacking libtasn1-6:armhf (4.9-4) ...
Selecting previously unselected package libgnutls30:armhf.
Preparing to unpack .../18-libgnutls30_3.5.8-1_armhf.deb ...
Unpacking libgnutls30:armhf (3.5.8-1) ...
Selecting previously unselected package libsasl2-modules-db:armhf.
Preparing to unpack .../19-libsasl2-modules-db_2.1.27~101-g0780600+dfsg-2_armhf.deb ...
Unpacking libsasl2-modules-db:armhf (2.1.27~101-g0780600+dfsg-2) ...
Selecting previously unselected package libsasl2-2:armhf.
Preparing to unpack .../20-libsasl2-2_2.1.27~101-g0780600+dfsg-2_armhf.deb ...
Unpacking libsasl2-2:armhf (2.1.27~101-g0780600+dfsg-2) ...
Selecting previously unselected package libldap-common.
Preparing to unpack .../21-libldap-common_2.4.44+dfsg-3_all.deb ...
Unpacking libldap-common (2.4.44+dfsg-3) ...
Selecting previously unselected package libldap-2.4-2:armhf.
Preparing to unpack .../22-libldap-2.4-2_2.4.44+dfsg-3_armhf.deb ...
Unpacking libldap-2.4-2:armhf (2.4.44+dfsg-3) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../23-libnghttp2-14_1.17.0-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.17.0-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../24-libpsl5_0.16.1-1_armhf.deb ...
Unpacking libpsl5:armhf (0.16.1-1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../25-librtmp1_2.4+20151223.gitfa8646d.1-1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../26-libssh2-1_1.7.0-1_armhf.deb ...
Unpacking libssh2-1:armhf (1.7.0-1) ...
Selecting previously unselected package libssl1.0.2:armhf.
Preparing to unpack .../27-libssl1.0.2_1.0.2j-4_armhf.deb ...
Unpacking libssl1.0.2:armhf (1.0.2j-4) ...
Selecting previously unselected package libcurl3:armhf.
Preparing to unpack .../28-libcurl3_7.52.1-1_armhf.deb ...
Unpacking libcurl3:armhf (7.52.1-1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../29-libexpat1_2.2.0-2_armhf.deb ...
Unpacking libexpat1:armhf (2.2.0-2) ...
Selecting previously unselected package libjsoncpp1:armhf.
Preparing to unpack .../30-libjsoncpp1_1.7.4-3_armhf.deb ...
Unpacking libjsoncpp1:armhf (1.7.4-3) ...
Selecting previously unselected package libuv1:armhf.
Preparing to unpack .../31-libuv1_1.9.1-3_armhf.deb ...
Unpacking libuv1:armhf (1.9.1-3) ...
Selecting previously unselected package cmake.
Preparing to unpack .../32-cmake_3.7.1-1_armhf.deb ...
Unpacking cmake (3.7.1-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../33-libmagic-mgc_1%3a5.29-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.29-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../34-libmagic1_1%3a5.29-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.29-2) ...
Selecting previously unselected package file.
Preparing to unpack .../35-file_1%3a5.29-2_armhf.deb ...
Unpacking file (1:5.29-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../36-gettext-base_0.19.8.1-1_armhf.deb ...
Unpacking gettext-base (0.19.8.1-1) ...
Selecting previously unselected package libedit2:armhf.
Preparing to unpack .../37-libedit2_3.1-20160903-2_armhf.deb ...
Unpacking libedit2:armhf (3.1-20160903-2) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../38-libsigsegv2_2.10-5_armhf.deb ...
Unpacking libsigsegv2:armhf (2.10-5) ...
Selecting previously unselected package m4.
Preparing to unpack .../39-m4_1.4.18-1_armhf.deb ...
Unpacking m4 (1.4.18-1) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../40-autoconf_2.69-10_all.deb ...
Unpacking autoconf (2.69-10) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../41-autotools-dev_20161112.1_all.deb ...
Unpacking autotools-dev (20161112.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../42-automake_1%3a1.15-5_all.deb ...
Unpacking automake (1:1.15-5) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../43-autopoint_0.19.8.1-1_all.deb ...
Unpacking autopoint (0.19.8.1-1) ...
Selecting previously unselected package d-shlibs.
Preparing to unpack .../44-d-shlibs_0.79_all.deb ...
Unpacking d-shlibs (0.79) ...
Selecting previously unselected package libtool.
Preparing to unpack .../45-libtool_2.4.6-2_all.deb ...
Unpacking libtool (2.4.6-2) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../46-dh-autoreconf_13_all.deb ...
Unpacking dh-autoreconf (13) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../47-libarchive-zip-perl_1.59-1_all.deb ...
Unpacking libarchive-zip-perl (1.59-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../48-libfile-stripnondeterminism-perl_0.029-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.029-2) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../49-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../50-dh-strip-nondeterminism_0.029-2_all.deb ...
Unpacking dh-strip-nondeterminism (0.029-2) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../51-libglib2.0-0_2.50.2-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.50.2-2) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../52-libcroco3_0.6.11-2_armhf.deb ...
Unpacking libcroco3:armhf (0.6.11-2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../53-gettext_0.19.8.1-1_armhf.deb ...
Unpacking gettext (0.19.8.1-1) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../54-intltool-debian_0.35.0+20060710.4_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../55-po-debconf_1.0.20_all.deb ...
Unpacking po-debconf (1.0.20) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../56-debhelper_10.2.3_all.deb ...
Unpacking debhelper (10.2.3) ...
Selecting previously unselected package libllvm3.8:armhf.
Preparing to unpack .../57-libllvm3.8_1%3a3.8.1-13+rpi1_armhf.deb ...
Unpacking libllvm3.8:armhf (1:3.8.1-13+rpi1) ...
Selecting previously unselected package libclang1-3.8:armhf.
Preparing to unpack .../58-libclang1-3.8_1%3a3.8.1-13+rpi1_armhf.deb ...
Unpacking libclang1-3.8:armhf (1:3.8.1-13+rpi1) ...
Selecting previously unselected package doxygen.
Preparing to unpack .../59-doxygen_1.8.12-1+rpi1_armhf.deb ...
Unpacking doxygen (1.8.12-1+rpi1) ...
Selecting previously unselected package help2man.
Preparing to unpack .../60-help2man_1.47.4_armhf.deb ...
Unpacking help2man (1.47.4) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../61-zlib1g-dev_1%3a1.2.8.dfsg-4_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.8.dfsg-4) ...
Selecting previously unselected package libjsoncpp-dev:armhf.
Preparing to unpack .../62-libjsoncpp-dev_1.7.4-3_armhf.deb ...
Unpacking libjsoncpp-dev:armhf (1.7.4-3) ...
Selecting previously unselected package sbuild-build-depends-bamtools-dummy.
Preparing to unpack .../63-sbuild-build-depends-bamtools-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-bamtools-dummy (0.invalid.0) ...
Setting up libnettle6:armhf (3.3-1) ...
Setting up libexpat1:armhf (2.2.0-2) ...
Setting up libarchive-zip-perl (1.59-1) ...
Setting up libnghttp2-14:armhf (1.17.0-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up libldap-common (2.4.44+dfsg-3) ...
Setting up libuv1:armhf (1.9.1-3) ...
Setting up groff-base (1.22.3-9) ...
Setting up libsasl2-modules-db:armhf (2.1.27~101-g0780600+dfsg-2) ...
Setting up libsasl2-2:armhf (2.1.27~101-g0780600+dfsg-2) ...
Setting up d-shlibs (0.79) ...
Setting up gettext-base (0.19.8.1-1) ...
Setting up cmake-data (3.7.1-1) ...
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-5) ...
Setting up libbsd0:armhf (0.8.3-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-2.1) ...
Setting up libtasn1-6:armhf (4.9-4) ...
Setting up libmagic-mgc (1:5.29-2) ...
Setting up libmagic1:armhf (1:5.29-2) ...
Setting up libhogweed4:armhf (3.3-1) ...
Setting up libssl1.0.2:armhf (1.0.2j-4) ...
Setting up libssh2-1:armhf (1.7.0-1) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
Setting up autotools-dev (20161112.1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up liblocale-gettext-perl (1.07-3+b1) ...
Setting up libffi6:armhf (3.2.1-6) ...
Setting up libkeyutils1:armhf (1.5.9-9) ...
Setting up bsdmainutils (9.0.12) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-1) ...
Setting up liblzo2-2:armhf (2.08-1.2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-4) ...
Setting up libfile-stripnondeterminism-perl (0.029-2) ...
Setting up libjsoncpp1:armhf (1.7.4-3) ...
Setting up libjsoncpp-dev:armhf (1.7.4-3) ...
Setting up libedit2:armhf (3.1-20160903-2) ...
Setting up libllvm3.8:armhf (1:3.8.1-13+rpi1) ...
Setting up libidn2-0:armhf (0.14-1) ...
Setting up libarchive13:armhf (3.2.1-5) ...
Setting up libpsl5:armhf (0.16.1-1) ...
Setting up libglib2.0-0:armhf (2.50.2-2) ...
No schema files found: doing nothing.
Setting up libclang1-3.8:armhf (1:3.8.1-13+rpi1) ...
Setting up autoconf (2.69-10) ...
Setting up file (1:5.29-2) ...
Setting up libkrb5support0:armhf (1.15-1) ...
Setting up libcroco3:armhf (0.6.11-2) ...
Setting up libp11-kit0:armhf (0.23.3-2) ...
Setting up automake (1:1.15-5) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up help2man (1.47.4) ...
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2) ...
Setting up libk5crypto3:armhf (1.15-1) ...
Setting up gettext (0.19.8.1-1) ...
Setting up libgnutls30:armhf (3.5.8-1) ...
Setting up doxygen (1.8.12-1+rpi1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libldap-2.4-2:armhf (2.4.44+dfsg-3) ...
Setting up libkrb5-3:armhf (1.15-1) ...
Setting up po-debconf (1.0.20) ...
Setting up libgssapi-krb5-2:armhf (1.15-1) ...
Setting up libcurl3:armhf (7.52.1-1) ...
Setting up cmake (3.7.1-1) ...
Setting up dh-strip-nondeterminism (0.029-2) ...
Setting up debhelper (10.2.3) ...
Setting up dh-autoreconf (13) ...
Setting up sbuild-build-depends-bamtools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.27.51.20161127-1 dpkg-dev_1.18.15 g++-6_6.2.1-5+rpi1 gcc-6_6.2.1-5+rpi1 libc6-dev_2.24-7+rpi1 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4~beta1 autoconf_2.69-10 automake_1:1.15-5 autopoint_0.19.8.1-1 autotools-dev_20161112.1 base-files_9.7+rpi1 base-passwd_3.5.41 bash_4.4-2 binutils_2.27.51.20161127-1 bsdmainutils_9.0.12 bsdutils_1:2.29-1 build-essential_12.2 bzip2_1.0.6-8 cmake_3.7.1-1 cmake-data_3.7.1-1 coreutils_8.25-2 cpio_2.11+dfsg-6 cpp_4:6.1.1-1 cpp-6_6.2.1-5+rpi1 d-shlibs_0.79 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_10.2.3 debianutils_4.8.1 dh-autoreconf_13 dh-strip-nondeterminism_0.029-2 diffutils_1:3.5-1 dmsetup_2:1.02.136-1 doxygen_1.8.12-1+rpi1 dpkg_1.18.15 dpkg-dev_1.18.15 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-2 file_1:5.29-2 findutils_4.6.0+git+20161106-1 fuse2fs_1.43.3-1 g++_4:6.1.1-1 g++-6_6.2.1-5+rpi1 gcc_4:6.1.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-6_6.2.1-5+rpi1 gcc-6-base_6.2.1-5+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gnupg_2.1.16-2 gnupg-agent_2.1.16-2 gnupg-l10n_2.1.16-2 gpgv_2.1.16-2 grep_2.26-1 groff-base_1.22.3-9 gzip_1.6-5 help2man_1.47.4 hostname_3.18 init_1.46 init-system-helpers_1.46 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_23-1 libacl1_2.2.52-3 libapparmor1_2.10.95-6 libapt-pkg5.0_1.4~beta1 libarchive-zip-perl_1.59-1 libarchive13_3.2.1-5 libasan3_6.2.1-5+rpi1 libassuan0_2.4.3-2 libatomic1_6.2.1-5+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-1 libaudit1_1:2.6.7-1 libblkid1_2.29-1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.24-7+rpi1 libc-dev-bin_2.24-7+rpi1 libc6_2.24-7+rpi1 libc6-dev_2.24-7+rpi1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.2.1-5+rpi1 libclang1-3.8_1:3.8.1-13+rpi1 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.3-2 libcurl3_7.52.1-1 libdb5.3_5.3.28-12 libdbus-1-3_1.10.14-1 libdebconfclient0_0.218 libdevmapper1.02.1_2:1.02.136-1 libdpkg-perl_1.18.15 libdrm2_2.4.74-1 libedit2_3.1-20160903-2 libexpat1_2.2.0-2 libfakeroot_1.21-2 libfdisk1_2.29-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.029-2 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.2.1-5+rpi1 libgcc1_1:6.2.1-5+rpi1 libgcrypt20_1.7.3-2 libgdbm3_1.8.3-14 libglib2.0-0_2.50.2-2 libgmp10_2:6.1.1+dfsg-1 libgnutls30_3.5.8-1 libgomp1_6.2.1-5+rpi1 libgpg-error0_1.25-1 libgssapi-krb5-2_1.15-1 libhogweed4_3.3-1 libicu57_57.1-5 libidn11_1.33-1 libidn2-0_0.14-1 libip4tc0_1.6.0-4 libisl15_0.17.1-1 libjsoncpp-dev_1.7.4-3 libjsoncpp1_1.7.4-3 libk5crypto3_1.15-1 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_23-1 libkrb5-3_1.15-1 libkrb5support0_1.15-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.44+dfsg-3 libldap-common_2.4.44+dfsg-3 libllvm3.8_1:3.8.1-13+rpi1 liblocale-gettext-perl_1.07-3+b1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 liblzo2-2_2.08-1.2 libmagic-mgc_1:5.29-2 libmagic1_1:5.29-2 libmount1_2.29-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160917-1 libncursesw5_6.0+20160917-1 libnettle6_3.3-1 libnghttp2-14_1.17.0-1 libnpth0_1.3-1 libp11-kit0_0.23.3-2 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpcre3_2:8.39-2 libperl5.24_5.24.1~rc4-1 libpipeline1_1.4.1-2 libpng12-0_1.2.54-6 libprocps6_2:3.3.12-3 libpsl5_0.16.1-1 libreadline7_7.0-1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-2 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-2 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-1 libsemanage1_2.6-1 libsepol1_2.6-1 libsigsegv2_2.10-5 libsmartcols1_2.29-1 libsqlite3-0_3.15.2-1 libss2_1.43.3-1 libssh2-1_1.7.0-1 libssl1.0.2_1.0.2j-4 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 libsystemd0_232-6 libtasn1-6_4.9-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160917-1 libtool_2.4.6-2 libubsan0_6.2.1-5+rpi1 libudev1_232-6 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1 libuv1_1.9.1-3 libxml2_2.9.4+dfsg1-2.1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.3 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9 makedev_2.3.1-93 man-db_2.7.6.1-2 manpages_4.08-1 mawk_1.3.3-17 mount_2.29-1 multiarch-support_2.24-7+rpi1 nano_2.7.1-1 ncurses-base_6.0+20160917-1 ncurses-bin_6.0+20160917-1 passwd_1:4.2-3.3 patch_2.7.5-1 perl_5.24.1~rc4-1 perl-base_5.24.1~rc4-1 perl-modules-5.24_5.24.1~rc4-1 pinentry-curses_0.9.7-9 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-1 sbuild-build-depends-bamtools-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_232-6 systemd-sysv_232-6 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1.1 tzdata_2016j-2 udev_232-6 util-linux_2.29-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-4 zlib1g-dev_1:1.2.8.dfsg-4
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Jan 13 09:55:57 2017 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./bamtools_2.4.1+dfsg-1.dsc
dpkg-source: info: extracting bamtools in /<<BUILDDIR>>/bamtools-2.4.1+dfsg
dpkg-source: info: unpacking bamtools_2.4.1+dfsg.orig.tar.gz
dpkg-source: info: unpacking bamtools_2.4.1+dfsg-1.debian.tar.xz
dpkg-source: info: applying doxygen-tweak
dpkg-source: info: applying 0001-ignore-thirdparty-and-fix-jsoncpp.patch
dpkg-source: info: applying non-deprecated-jsoncpp-function-names
dpkg-source: info: applying 0002-support-out-of-source-build.patch
dpkg-source: info: applying 0003-remove-custom-ExportHeader-function-use-install-inst.patch
dpkg-source: info: applying 0005-Install-libbamtools-to-lib.-Installing-libraries-to-.patch
dpkg-source: info: applying 0006-Doxygen-reproducibility
dpkg-source: info: applying 0007-Big_Endian.patch
dpkg-source: info: applying 0008_Cmake_Test.patch
dpkg-source: info: applying spelling
dpkg-source: info: applying fix_soversion.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-0bb08b42-718e-4c94-affb-fb62af972943
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package bamtools
dpkg-buildpackage: info: source version 2.4.1+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build bamtools-2.4.1+dfsg
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel
dh_testdir
dh_auto_clean
dh_autoreconf_clean
dh_clean
debian/rules build-arch
dh build-arch --parallel
dh_testdir -a -O--parallel
dh_update_autotools_config -a -O--parallel
dh_autoreconf -a -O--parallel
dh_auto_configure -a -O--parallel
cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var
-- The C compiler identification is GNU 6.2.1
-- The CXX compiler identification is GNU 6.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
-- Build files have been written to: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf
dh_auto_build -a -O--parallel
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<BUILDDIR>>/bamtools-2.4.1+dfsg -B/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/depend
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools-static.dir/DependInfo.cmake --color=
Scanning dependencies of target BamTools
Scanning dependencies of target BamTools-static
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 3%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamMultiReader.cpp.o
[ 3%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamAlignment.cpp.o
[ 3%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamAlignment.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.cpp
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/BamAlignment.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.cpp
[ 4%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamReader.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamMultiReader.cpp
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/BamReader.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamReader.cpp
[ 5%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamWriter.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/BamWriter.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamWriter.cpp
[ 6%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamHeader.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamHeader.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamHeader.cpp
[ 7%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgram.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamProgram.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamProgram.cpp
[ 8%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgramChain.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamProgramChain.cpp
[ 9%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamMultiReader.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamMultiReader.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamMultiReader.cpp
[ 10%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroup.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamReadGroup.cpp
[ 11%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamReadGroupDictionary.cpp
[ 12%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamReader.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamReader.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamReader.cpp
[ 13%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamWriter.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamWriter.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamWriter.cpp
[ 14%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequence.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamSequence.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamSequence.cpp
[ 15%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamHeader.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamHeader.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamHeader.cpp
[ 16%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamProgram.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamProgram.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamProgram.cpp
[ 17%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamSequenceDictionary.cpp
[ 18%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamProgramChain.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamProgramChain.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamProgramChain.cpp
[ 19%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamHeader_p.cpp
[ 20%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamReadGroup.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamReadGroup.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamReadGroup.cpp
[ 21%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamMultiReader_p.cpp
[ 22%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamReadGroupDictionary.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamReadGroupDictionary.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamReadGroupDictionary.cpp
[ 23%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamSequence.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamSequence.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamSequence.cpp
[ 24%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp
[ 25%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamSequenceDictionary.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamSequenceDictionary.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/SamSequenceDictionary.cpp
[ 26%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamHeader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamHeader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamHeader_p.cpp
[ 27%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamReader_p.cpp
[ 28%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamMultiReader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamMultiReader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamMultiReader_p.cpp
[ 29%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamRandomAccessController_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp
[ 30%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamWriter_p.cpp
[ 31%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamReader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamReader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamReader_p.cpp
[ 32%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/index/BamIndexFactory_p.cpp
[ 33%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/index/BamStandardIndex_p.cpp
[ 34%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/index/BamToolsIndex_p.cpp
[ 35%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamWriter_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamWriter_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/bam/BamWriter_p.cpp
[ 36%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/index/BamIndexFactory_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/index/BamIndexFactory_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/index/BamIndexFactory_p.cpp
[ 37%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamDeviceFactory_p.cpp
[ 38%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/index/BamStandardIndex_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/index/BamStandardIndex_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/index/BamStandardIndex_p.cpp
[ 39%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/index/BamToolsIndex_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/index/BamToolsIndex_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/index/BamToolsIndex_p.cpp
[ 40%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamFile_p.cpp
[ 41%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamFtp_p.cpp
[ 42%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamHttp_p.cpp
[ 43%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamDeviceFactory_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamDeviceFactory_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamDeviceFactory_p.cpp
[ 44%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamFile_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamFile_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamFile_p.cpp
[ 45%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamFtp_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamFtp_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamFtp_p.cpp
[ 46%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamPipe_p.cpp
[ 47%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamHttp_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamHttp_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamHttp_p.cpp
[ 48%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BgzfStream_p.cpp
[ 50%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/ByteArray_p.cpp
[ 51%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp: In member function 'std::__cxx11::string BamTools::Internal::HostAddress::GetIPString() const':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp:325:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if ( i != 0 )
^~
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp:327:17: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
ss << hex << ( (uint16_t(m_ip6Address[2*i]) << 8) |
^~
[ 52%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamPipe_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamPipe_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BamPipe_p.cpp
[ 53%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostInfo_p.cpp
[ 54%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HttpHeader_p.cpp
[ 55%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BgzfStream_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BgzfStream_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/BgzfStream_p.cpp
[ 56%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/ByteArray_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/ByteArray_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/ByteArray_p.cpp
[ 57%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/ILocalIODevice_p.cpp
[ 58%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/RollingBuffer_p.cpp
[ 59%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/HostAddress_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/HostAddress_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp: In member function 'std::__cxx11::string BamTools::Internal::HostAddress::GetIPString() const':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp:325:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if ( i != 0 )
^~
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostAddress_p.cpp:327:17: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
ss << hex << ( (uint16_t(m_ip6Address[2*i]) << 8) |
^~
[ 60%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/HostInfo_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/HostInfo_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HostInfo_p.cpp
[ 61%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/TcpSocket_p.cpp
[ 62%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/HttpHeader_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/HttpHeader_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/HttpHeader_p.cpp
[ 63%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp
[ 64%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/ILocalIODevice_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/ILocalIODevice_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/ILocalIODevice_p.cpp
[ 65%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/TcpSocketEngine_unix_p.cpp
[ 66%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/sam/SamFormatParser_p.cpp
[ 67%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/RollingBuffer_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/RollingBuffer_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/RollingBuffer_p.cpp
[ 68%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp
[ 69%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/TcpSocket_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/TcpSocket_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/TcpSocket_p.cpp
[ 70%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp
[ 71%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/io/TcpSocketEngine_unix_p.cpp
[ 72%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/sam/SamFormatParser_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatParser_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/sam/SamFormatParser_p.cpp
[ 73%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp
[ 74%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/sam/SamFormatPrinter_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp
[ 75%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -fPIC -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/utils/BamException_p.cpp
[ 76%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/sam/SamHeaderValidator_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp
[ 77%] Linking CXX shared library ../../lib/libbamtools.so
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wl,-z,relro -shared -Wl,-soname,libbamtools.so.2.4.0 -o ../../lib/libbamtools.so.2.4.0 CMakeFiles/BamTools.dir/BamAlignment.cpp.o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o CMakeFiles/BamTools.dir/BamReader.cpp.o CMakeFiles/BamTools.dir/BamWriter.cpp.o CMakeFiles/BamTools.dir/SamHeader.cpp.o CMakeFiles/BamTools.dir/SamProgram.cpp.o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o CMakeFiles/BamTools.dir/SamSequence.cpp.o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -lz
[ 78%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/utils/BamException_p.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/utils/BamException_p.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/internal/utils/BamException_p.cpp
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -E cmake_symlink_library ../../lib/libbamtools.so.2.4.0 ../../lib/libbamtools.so.2.4.0 ../../lib/libbamtools.so
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Built target BamTools
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils/CMakeFiles/BamTools-utils.dir/DependInfo.cmake --color=
Scanning dependencies of target BamTools-utils
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o
[ 80%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils/bamtools_options.cpp
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils/bamtools_fasta.cpp
[ 81%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils/bamtools_pileup_engine.cpp
[ 82%] Linking CXX static library ../../lib/libbamtools.a
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -P CMakeFiles/BamTools-static.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools-static.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libbamtools.a CMakeFiles/BamTools-static.dir/BamAlignment.cpp.o CMakeFiles/BamTools-static.dir/BamMultiReader.cpp.o CMakeFiles/BamTools-static.dir/BamReader.cpp.o CMakeFiles/BamTools-static.dir/BamWriter.cpp.o CMakeFiles/BamTools-static.dir/SamHeader.cpp.o CMakeFiles/BamTools-static.dir/SamProgram.cpp.o CMakeFiles/BamTools-static.dir/SamProgramChain.cpp.o CMakeFiles/BamTools-static.dir/SamReadGroup.cpp.o CMakeFiles/BamTools-static.dir/SamReadGroupDictionary.cpp.o CMakeFiles/BamTools-static.dir/SamSequence.cpp.o CMakeFiles/BamTools-static.dir/SamSequenceDictionary.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamHeader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamMultiReader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamRandomAccessController_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamReader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamWriter_p.cpp.o CMakeFiles/BamTools-static.dir/internal/index/BamIndexFactory_p.cpp.o CMakeFiles/BamTools-static.dir/internal/index/BamStandardIndex_p.cpp.o CMakeFiles/BamTools-static.dir/internal/index/BamToolsIndex_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamDeviceFactory_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamFile_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamFtp_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamHttp_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamPipe_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BgzfStream_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/ByteArray_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/HostAddress_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/HostInfo_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/HttpHeader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/ILocalIODevice_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/RollingBuffer_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/TcpSocket_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatParser_p.cpp.o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatPrinter_p.cpp.o CMakeFiles/BamTools-static.dir/internal/sam/SamHeaderValidator_p.cpp.o CMakeFiles/BamTools-static.dir/internal/utils/BamException_p.cpp.o
/usr/bin/ranlib ../../lib/libbamtools.a
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Built target BamTools-static
[ 83%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils/bamtools_utilities.cpp
[ 84%] Linking CXX static library ../../lib/libbamtools-utils.a
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/cmake -P CMakeFiles/BamTools-utils.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools-utils.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libbamtools-utils.a CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o
/usr/bin/ranlib ../../lib/libbamtools-utils.a
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target BamTools-utils
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit/CMakeFiles/bamtools_cmd.dir/DependInfo.cmake --color=
Scanning dependencies of target bamtools_cmd
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o
[ 87%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o
[ 87%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_count.cpp
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_coverage.cpp
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_convert.cpp
[ 88%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_filter.cpp
[ 89%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_header.cpp
[ 90%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_index.cpp
[ 91%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_merge.cpp
[ 92%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_random.cpp
[ 93%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_resolve.cpp
[ 94%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_revert.cpp
[ 95%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_sort.cpp
[ 96%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp
[ 97%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_stats.cpp
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp: In member function 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&)':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:474:23: warning: typedef 'TagElementType' locally defined but not used [-Wunused-local-typedefs]
typedef T TagElementType;
^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamReader.h:14:0,
from /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:14:
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = signed char; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = signed char]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:415:95: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
int elementLength = 0;
^~~~~~~~~~~~~
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = short int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = short int]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:416:96: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = int]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:417:96: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = unsigned char; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = unsigned char]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:418:96: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = short unsigned int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = short unsigned int]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:419:97: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = unsigned int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = unsigned int]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:420:97: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h: In instantiation of 'bool BamTools::BamAlignment::GetTag(const string&, std::vector<T>&) const [with T = float; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:499:13: required from 'bool BamTools::SplitTool::SplitToolPrivate::SplitListTagImpl(BamTools::BamAlignment&) [with T = float]'
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools_split.cpp:421:94: required from here
/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api/BamAlignment.h:582:9: warning: variable 'elementLength' set but not used [-Wunused-but-set-variable]
[ 98%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api -I/<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o -c /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit/bamtools.cpp
[100%] Linking CXX executable ../../bin/bamtools
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/cmake -E cmake_link_script CMakeFiles/bamtools_cmd.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/bamtools-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++98 -O3 -DNDEBUG -Wl,-z,relro CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o -o ../../bin/bamtools-2.4.1 -Wl,-rpath,/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/lib: -rdynamic ../../lib/libbamtools-utils.a -ljsoncpp ../../lib/libbamtools.so.2.4.0 -lz
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/cmake -E cmake_symlink_executable ../../bin/bamtools-2.4.1 ../../bin/bamtools
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target bamtools_cmd
make[2]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
dh_auto_test -a -O--parallel
make -j4 test ARGS\+=-j4
make[1]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf
Start 1: bamtools_help
Start 2: bamtools_stats
1/2 Test #1: bamtools_help .................... Passed 0.02 sec
2/2 Test #2: bamtools_stats ................... Passed 0.02 sec
100% tests passed, 0 tests failed out of 2
Total Test time (real) = 0.04 sec
make[1]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
fakeroot debian/rules binary-arch
dh binary-arch --parallel
dh_testroot -a -O--parallel
dh_prep -a -O--parallel
dh_auto_install -a -O--parallel
make -j4 install DESTDIR=/<<BUILDDIR>>/bamtools-2.4.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<BUILDDIR>>/bamtools-2.4.1+dfsg -B/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/depend
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools-static.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/build
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/api/CMakeFiles/BamTools-static.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/api/CMakeFiles/BamTools.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target BamTools
[ 79%] Built target BamTools-static
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/utils /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/utils/CMakeFiles/BamTools-utils.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/utils/CMakeFiles/BamTools-utils.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target BamTools-utils
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/bamtools-2.4.1+dfsg /<<BUILDDIR>>/bamtools-2.4.1+dfsg/src/toolkit /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/src/toolkit/CMakeFiles/bamtools_cmd.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/toolkit/CMakeFiles/bamtools_cmd.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target bamtools_cmd
make[2]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "Release"
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/shared/bamtools_global.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/lib/libbamtools.so.2.4.0
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/lib/libbamtools.so
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/lib/libbamtools.a
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/api_global.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamAlgorithms.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamAlignment.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamAux.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamConstants.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamIndex.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamMultiReader.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamReader.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/BamWriter.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/IBamIODevice.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamConstants.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamHeader.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamProgram.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamProgramChain.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamReadGroup.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamReadGroupDictionary.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamSequence.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/SamSequenceDictionary.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/api/algorithms/Sort.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/include/bamtools/bamtools_version.h
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/bin/bamtools-2.4.1
-- Installing: /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/bin/bamtools
-- Set runtime path of "/<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/bin/bamtools-2.4.1" to ""
make[1]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg/obj-arm-linux-gnueabihf'
debian/rules override_dh_install-arch
make[1]: Entering directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg'
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
debian/tmp/usr/lib/lib*.so
Library package automatic movement utility
--> zlib1g-dev package exists.
set -e
install -d -m 755 debian/libbamtools-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libbamtools2.4.0/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/libbamtools.a debian/libbamtools-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/libbamtools.so debian/libbamtools-dev/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/bamtools-2.4.1+dfsg/debian/tmp/usr/lib/libbamtools.so.2.4.0 debian/libbamtools2.4.0/usr/lib/arm-linux-gnueabihf
PKGDEV=libbamtools-dev
PKGSHL=libbamtools2.4.0
install -d -m 755 debian/libbamtools-dev/usr/include
mv debian/tmp/usr/include/bamtools debian/libbamtools-dev/usr/include
dh_install --arch
# no need to install different versions of bamtools
rm -rf debian/bamtools/usr/bin/bamtools
mv debian/bamtools/usr/bin/bamtools-[0-9]* debian/bamtools/usr/bin/bamtools
make[1]: Leaving directory '/<<BUILDDIR>>/bamtools-2.4.1+dfsg'
dh_installdocs -a -O--parallel
dh_installchangelogs -a -O--parallel
dh_installman -a -O--parallel
dh_lintian -a -O--parallel
dh_perl -a -O--parallel
dh_link -a -O--parallel
dh_strip_nondeterminism -a -O--parallel
dh_compress -a -O--parallel
dh_fixperms -a -O--parallel
dh_strip -a -O--parallel
dh_makeshlibs -a -O--parallel
dh_shlibdeps -a -O--parallel
dpkg-shlibdeps: warning: debian/bamtools/usr/bin/bamtools contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/bamtools/usr/bin/bamtools was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/bamtools/usr/bin/bamtools was not linked against libz.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libbamtools2.4.0/usr/lib/arm-linux-gnueabihf/libbamtools.so.2.4.0 found in none of the libraries
dh_installdeb -a -O--parallel
dh_gencontrol -a -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O--parallel
dh_builddeb -a -O--parallel
dpkg-deb: building package 'bamtools-dbgsym' in '../bamtools-dbgsym_2.4.1+dfsg-1_armhf.deb'.
dpkg-deb: building package 'libbamtools-dev' in '../libbamtools-dev_2.4.1+dfsg-1_armhf.deb'.
dpkg-deb: building package 'libbamtools2.4.0-dbgsym' in '../libbamtools2.4.0-dbgsym_2.4.1+dfsg-1_armhf.deb'.
dpkg-deb: building package 'libbamtools2.4.0' in '../libbamtools2.4.0_2.4.1+dfsg-1_armhf.deb'.
dpkg-deb: building package 'bamtools' in '../bamtools_2.4.1+dfsg-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genbuildinfo: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=any -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../bamtools_2.4.1+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build bamtools-2.4.1+dfsg
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-01-24T05:00:11Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
bamtools_2.4.1+dfsg-1_armhf.changes:
------------------------------------
Format: 1.8
Date: Fri, 13 Jan 2017 10:47:00 +0100
Source: bamtools
Binary: bamtools libbamtools-dev libbamtools2.4.0 libbamtools-doc
Architecture: armhf
Version: 2.4.1+dfsg-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
bamtools - toolkit for manipulating BAM (genome alignment) files
libbamtools-dev - C++ API for manipulating BAM (genome alignment) files
libbamtools-doc - docs for dynamic library for manipulating BAM (genome alignment)
libbamtools2.4.0 - dynamic library for manipulating BAM (genome alignment) files
Changes:
bamtools (2.4.1+dfsg-1) unstable; urgency=medium
.
* New upstream version
* debhelper 10
* cme fix dpkg-control
* d/watch: version=4
* Priority: optional
* soversion stays at 2.4.0 (FIXME: in future versions this should
be rather 2.5 without micro number)
Checksums-Sha1:
667241efa2978da03b9fff88f7713158b71682ba 2627022 bamtools-dbgsym_2.4.1+dfsg-1_armhf.deb
5da1e2f0a3976fac5b795a38b489b027271c167c 6862 bamtools_2.4.1+dfsg-1_armhf.buildinfo
596f02fa80aba39313cb5baf2dceb3d5f223803d 171408 bamtools_2.4.1+dfsg-1_armhf.deb
27ebcea4e2562591d6ee7cd76695ef8ff4e9978d 213150 libbamtools-dev_2.4.1+dfsg-1_armhf.deb
e86ea3c405c2ad1b869d2e5f0df848e8e2300b89 2146474 libbamtools2.4.0-dbgsym_2.4.1+dfsg-1_armhf.deb
3a8dcb2af8005601ea8b89321b5eb569a9bf46db 159790 libbamtools2.4.0_2.4.1+dfsg-1_armhf.deb
Checksums-Sha256:
79c9d3b3c2f152d2cb100da618cae8192e2126293eaf74c51a509c87299f566f 2627022 bamtools-dbgsym_2.4.1+dfsg-1_armhf.deb
67bc3cc25c918ebac4bcadb8b1b3c4a864fd8acdd2524d5fe2804de14884f5b8 6862 bamtools_2.4.1+dfsg-1_armhf.buildinfo
17889611b210859cd06c1fb323d7f2e38d1120ca4d9c0f9ab55645ca18a283da 171408 bamtools_2.4.1+dfsg-1_armhf.deb
4effdcca15143ac3684735832d58ec54fabf50ed61fde1e5068b3cba7b20f346 213150 libbamtools-dev_2.4.1+dfsg-1_armhf.deb
7b712ed03f77938ee56ac8fd13383fd5d1c0c45ce9d85fb3a59dd1fcc939736a 2146474 libbamtools2.4.0-dbgsym_2.4.1+dfsg-1_armhf.deb
ac10e859733d11d7a79882c733023ce3c939843652d1c02c2803647236941a34 159790 libbamtools2.4.0_2.4.1+dfsg-1_armhf.deb
Files:
a804a15e987846a2b970ab2bc8f6919a 2627022 debug extra bamtools-dbgsym_2.4.1+dfsg-1_armhf.deb
6fb797dc11d9bf5bef75a21dcbf529c5 6862 science optional bamtools_2.4.1+dfsg-1_armhf.buildinfo
4513428838d42a25863ffc0ba689bf30 171408 science optional bamtools_2.4.1+dfsg-1_armhf.deb
ac96d5adfc70f993aed5a257e9bdd0f0 213150 libdevel optional libbamtools-dev_2.4.1+dfsg-1_armhf.deb
ce209059000695ecd9732643281eb620 2146474 debug extra libbamtools2.4.0-dbgsym_2.4.1+dfsg-1_armhf.deb
0a2f4af92d65e7cb16f1d20039776d27 159790 libs optional libbamtools2.4.0_2.4.1+dfsg-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
bamtools-dbgsym_2.4.1+dfsg-1_armhf.deb
--------------------------------------
new debian package, version 2.0.
size 2627022 bytes: control archive=497 bytes.
437 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: bamtools-dbgsym
Source: bamtools
Version: 2.4.1+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2679
Depends: bamtools (= 2.4.1+dfsg-1)
Section: debug
Priority: extra
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: Debug symbols for bamtools
Auto-Built-Package: debug-symbols
Build-Ids: 6463cb49d90ec1ec4691f5050a74d6a14e32b139
drwxr-xr-x root/root 0 2017-01-13 09:47 ./
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/debug/.build-id/64/
-rw-r--r-- root/root 2732344 2017-01-13 09:47 ./usr/lib/debug/.build-id/64/63cb49d90ec1ec4691f5050a74d6a14e32b139.debug
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-01-13 09:47 ./usr/share/doc/bamtools-dbgsym -> bamtools
bamtools_2.4.1+dfsg-1_armhf.deb
-------------------------------
new debian package, version 2.0.
size 171408 bytes: control archive=1307 bytes.
1812 bytes, 37 lines control
333 bytes, 5 lines md5sums
Package: bamtools
Version: 2.4.1+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 552
Depends: libbamtools2.4.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libjsoncpp1 (>= 1.7.4), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: toolkit for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the bamtools command-line toolkit.
.
Available bamtools commands:
convert Converts between BAM and a number of other formats
count Prints number of alignments in BAM file(s)
coverage Prints coverage statistics from the input BAM file
filter Filters BAM file(s) by user-specified criteria
header Prints BAM header information
index Generates index for BAM file
merge Merge multiple BAM files into single file
random Select random alignments from existing BAM file(s), intended more
as a testing tool.
resolve Resolves paired-end reads (marking the IsProperPair flag as needed)
revert Removes duplicate marks and restores original base qualities
sort Sorts the BAM file according to some criteria
split Splits a BAM file on user-specified property, creating a new BAM
output file for each value found
stats Prints some basic statistics from input BAM file(s)
drwxr-xr-x root/root 0 2017-01-13 09:47 ./
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/bin/
-rwxr-xr-x root/root 547388 2017-01-13 09:47 ./usr/bin/bamtools
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/bamtools/
-rw-r--r-- root/root 1412 2017-01-13 09:47 ./usr/share/doc/bamtools/changelog.Debian.gz
-rw-r--r-- root/root 1665 2017-01-13 09:47 ./usr/share/doc/bamtools/copyright
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/lintian/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 71 2017-01-13 09:47 ./usr/share/lintian/overrides/bamtools
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/man/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/man/man1/
-rw-r--r-- root/root 792 2017-01-13 09:47 ./usr/share/man/man1/bamtools.1.gz
libbamtools-dev_2.4.1+dfsg-1_armhf.deb
--------------------------------------
new debian package, version 2.0.
size 213150 bytes: control archive=1510 bytes.
900 bytes, 22 lines control
1879 bytes, 25 lines md5sums
Package: libbamtools-dev
Source: bamtools
Version: 2.4.1+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1129
Depends: libbamtools2.4.0 (= 2.4.1+dfsg-1), zlib1g-dev
Suggests: libbamtools-doc (= 2.4.1+dfsg-1)
Section: libdevel
Priority: optional
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: C++ API for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the developers API package.
drwxr-xr-x root/root 0 2017-01-13 09:47 ./
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/include/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/include/bamtools/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/include/bamtools/api/
-rw-r--r-- root/root 847 2016-07-05 14:22 ./usr/include/bamtools/api/BamAlgorithms.h
-rw-r--r-- root/root 23779 2017-01-13 09:47 ./usr/include/bamtools/api/BamAlignment.h
-rw-r--r-- root/root 15082 2017-01-13 09:47 ./usr/include/bamtools/api/BamAux.h
-rw-r--r-- root/root 9682 2016-07-05 14:22 ./usr/include/bamtools/api/BamConstants.h
-rw-r--r-- root/root 2885 2016-07-05 14:22 ./usr/include/bamtools/api/BamIndex.h
-rw-r--r-- root/root 4676 2016-07-05 14:22 ./usr/include/bamtools/api/BamMultiReader.h
-rw-r--r-- root/root 4285 2016-07-05 14:22 ./usr/include/bamtools/api/BamReader.h
-rw-r--r-- root/root 2208 2016-07-05 14:22 ./usr/include/bamtools/api/BamWriter.h
-rw-r--r-- root/root 3022 2016-07-05 14:22 ./usr/include/bamtools/api/IBamIODevice.h
-rw-r--r-- root/root 3725 2016-07-05 14:22 ./usr/include/bamtools/api/SamConstants.h
-rw-r--r-- root/root 2959 2016-07-05 14:22 ./usr/include/bamtools/api/SamHeader.h
-rw-r--r-- root/root 2389 2016-07-05 14:22 ./usr/include/bamtools/api/SamProgram.h
-rw-r--r-- root/root 3127 2016-07-05 14:22 ./usr/include/bamtools/api/SamProgramChain.h
-rw-r--r-- root/root 3449 2016-07-05 14:22 ./usr/include/bamtools/api/SamReadGroup.h
-rw-r--r-- root/root 3281 2016-07-05 14:22 ./usr/include/bamtools/api/SamReadGroupDictionary.h
-rw-r--r-- root/root 2567 2016-07-05 14:22 ./usr/include/bamtools/api/SamSequence.h
-rw-r--r-- root/root 3248 2016-07-05 14:22 ./usr/include/bamtools/api/SamSequenceDictionary.h
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/include/bamtools/api/algorithms/
-rw-r--r-- root/root 12112 2016-07-05 14:22 ./usr/include/bamtools/api/algorithms/Sort.h
-rw-r--r-- root/root 757 2016-07-05 14:22 ./usr/include/bamtools/api/api_global.h
-rw-r--r-- root/root 852 2017-01-13 09:47 ./usr/include/bamtools/bamtools_version.h
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/include/bamtools/shared/
-rw-r--r-- root/root 2790 2016-07-05 14:22 ./usr/include/bamtools/shared/bamtools_global.h
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 1015172 2017-01-13 09:47 ./usr/lib/arm-linux-gnueabihf/libbamtools.a
lrwxrwxrwx root/root 0 2017-01-13 09:47 ./usr/lib/arm-linux-gnueabihf/libbamtools.so -> libbamtools.so.2.4.0
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/cmake/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/cmake/bamtools/
-rw-r--r-- root/root 1574 2017-01-13 09:47 ./usr/share/cmake/bamtools/bamtools-config.cmake
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/libbamtools-dev/
-rw-r--r-- root/root 1412 2017-01-13 09:47 ./usr/share/doc/libbamtools-dev/changelog.Debian.gz
-rw-r--r-- root/root 1665 2017-01-13 09:47 ./usr/share/doc/libbamtools-dev/copyright
libbamtools2.4.0-dbgsym_2.4.1+dfsg-1_armhf.deb
----------------------------------------------
new debian package, version 2.0.
size 2146474 bytes: control archive=505 bytes.
461 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libbamtools2.4.0-dbgsym
Source: bamtools
Version: 2.4.1+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2211
Depends: libbamtools2.4.0 (= 2.4.1+dfsg-1)
Section: debug
Priority: extra
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: Debug symbols for libbamtools2.4.0
Auto-Built-Package: debug-symbols
Build-Ids: dc62af79983452f6b42debbb326d55657587f61b
drwxr-xr-x root/root 0 2017-01-13 09:47 ./
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/debug/.build-id/dc/
-rw-r--r-- root/root 2253144 2017-01-13 09:47 ./usr/lib/debug/.build-id/dc/62af79983452f6b42debbb326d55657587f61b.debug
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-01-13 09:47 ./usr/share/doc/libbamtools2.4.0-dbgsym -> libbamtools2.4.0
libbamtools2.4.0_2.4.1+dfsg-1_armhf.deb
---------------------------------------
new debian package, version 2.0.
size 159790 bytes: control archive=986 bytes.
886 bytes, 21 lines control
322 bytes, 4 lines md5sums
35 bytes, 1 lines shlibs
60 bytes, 2 lines triggers
Package: libbamtools2.4.0
Source: bamtools
Version: 2.4.1+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 518
Depends: libc6 (>= 2.15), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Section: libs
Priority: optional
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: dynamic library for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the runtime library.
drwxr-xr-x root/root 0 2017-01-13 09:47 ./
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 512252 2017-01-13 09:47 ./usr/lib/arm-linux-gnueabihf/libbamtools.so.2.4.0
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/doc/libbamtools2.4.0/
-rw-r--r-- root/root 1412 2017-01-13 09:47 ./usr/share/doc/libbamtools2.4.0/changelog.Debian.gz
-rw-r--r-- root/root 1665 2017-01-13 09:47 ./usr/share/doc/libbamtools2.4.0/copyright
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/lintian/
drwxr-xr-x root/root 0 2017-01-13 09:47 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 204 2017-01-13 09:47 ./usr/share/lintian/overrides/libbamtools2.4.0
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 100904
Build-Time: 463
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 392
Job: bamtools_2.4.1+dfsg-1
Machine Architecture: armhf
Package: bamtools
Package-Time: 905
Source-Version: 2.4.1+dfsg-1
Space: 100904
Status: successful
Version: 2.4.1+dfsg-1
--------------------------------------------------------------------------------
Finished at 2017-01-24T05:00:11Z
Build needed 00:15:05, 100904k disc space