bamtools →
2.4.0+dfsg-1+b1 →
armhf → 2015-09-12 16:52:07
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-04
╔══════════════════════════════════════════════════════════════════════════════╗
║ bamtools 2.4.0+dfsg-1+b1 (armhf) 12 Sep 2015 16:38 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: bamtools
Version: 2.4.0+dfsg-1+b1
Source Version: 2.4.0+dfsg-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/bamtools-lUG9ie/bamtools-2.4.0+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/bamtools-lUG9ie' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-6a12c1e9-e335-45bc-ba62-322dbaba31a6' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1 stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 stretch-staging/main Sources [8323 kB]
Get:3 http://172.17.0.1 stretch-staging/main armhf Packages [10.2 MB]
Ign http://172.17.0.1 stretch-staging/main Translation-en
Fetched 18.5 MB in 33s (550 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
─────────
Checking available source versions...
Download source files with APT
──────────────────────────────
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'bamtools' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/bamtools.git
Need to get 166 kB of source archives.
Get:1 http://172.17.0.1/private/ stretch-staging/main bamtools 2.4.0+dfsg-1 (dsc) [2191 B]
Get:2 http://172.17.0.1/private/ stretch-staging/main bamtools 2.4.0+dfsg-1 (tar) [157 kB]
Get:3 http://172.17.0.1/private/ stretch-staging/main bamtools 2.4.0+dfsg-1 (diff) [7496 B]
Fetched 166 kB in 0s (1626 kB/s)
Download complete and in download only mode
Check architectures
───────────────────
Check dependencies
──────────────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-Ft8jRD/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Ign file: ./ InRelease
Get:1 file: ./ Release.gpg [299 B]
Get:2 file: ./ Release [2119 B]
Ign file: ./ Translation-en
Reading package lists...
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 16 not upgraded.
Need to get 0 B/768 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 12820 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9.0.0), d-shlibs (>= 0.56), cmake, libz-dev, libjsoncpp-dev, help2man
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9.0.0), d-shlibs (>= 0.56), cmake, libz-dev, libjsoncpp-dev, help2man
dpkg-deb: building package 'sbuild-build-depends-bamtools-dummy' in '/«BUILDDIR»/resolver-FHjYC5/apt_archive/sbuild-build-depends-bamtools-dummy.deb'.
OK
Ign file: ./ InRelease
Get:1 file: ./ Release.gpg [299 B]
Get:2 file: ./ Release [2119 B]
Ign file: ./ Translation-en
Reading package lists...
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install bamtools build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils cmake cmake-data d-shlibs debhelper file gettext gettext-base
groff-base help2man intltool-debian libarchive13 libasprintf0v5 libcroco3
libcurl3 libexpat1 libffi6 libglib2.0-0 libgnutls-deb0-28 libgssapi-krb5-2
libhogweed4 libidn11 libjsoncpp-dev libjsoncpp0v5 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1 libnettle6
libp11-kit0 libpipeline1 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1
libssl1.0.0 libtasn1-6 libunistring0 libxml2 man-db po-debconf zlib1g
zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation codeblocks eclipse ninja-build dh-make
gettext-doc groff lrzip gnutls-bin krb5-doc krb5-user less www-browser
libmail-box-perl
Recommended packages:
curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
ca-certificates libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales
libsasl2-modules xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cmake cmake-data d-shlibs debhelper file gettext gettext-base
groff-base help2man intltool-debian libarchive13 libasprintf0v5 libcroco3
libcurl3 libexpat1 libffi6 libglib2.0-0 libgnutls-deb0-28 libgssapi-krb5-2
libhogweed4 libidn11 libjsoncpp-dev libjsoncpp0v5 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1 libnettle6
libp11-kit0 libpipeline1 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1
libssl1.0.0 libtasn1-6 libunistring0 libxml2 man-db po-debconf
sbuild-build-depends-bamtools-dummy zlib1g-dev
The following packages will be upgraded:
zlib1g
1 upgraded, 46 newly installed, 0 to remove and 15 not upgraded.
Need to get 16.6 MB/16.6 MB of archives.
After this operation, 54.4 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ stretch-staging/main groff-base armhf 1.22.3-1 [1085 kB]
Get:2 http://172.17.0.1/private/ stretch-staging/main bsdmainutils armhf 9.0.6 [177 kB]
Get:3 http://172.17.0.1/private/ stretch-staging/main libpipeline1 armhf 1.4.1-1 [23.9 kB]
Get:4 http://172.17.0.1/private/ stretch-staging/main zlib1g armhf 1:1.2.8.dfsg-2+b1 [80.9 kB]
Get:5 http://172.17.0.1/private/ stretch-staging/main man-db armhf 2.7.2-1 [973 kB]
Get:6 http://172.17.0.1/private/ stretch-staging/main libasprintf0v5 armhf 0.19.5.1-1 [32.0 kB]
Get:7 http://172.17.0.1/private/ stretch-staging/main libnettle6 armhf 3.1.1-4 [200 kB]
Get:8 http://172.17.0.1/private/ stretch-staging/main libhogweed4 armhf 3.1.1-4 [126 kB]
Get:9 http://172.17.0.1/private/ stretch-staging/main libffi6 armhf 3.2.1-3 [18.5 kB]
Get:10 http://172.17.0.1/private/ stretch-staging/main libp11-kit0 armhf 0.23.1-3 [94.2 kB]
Get:11 http://172.17.0.1/private/ stretch-staging/main libtasn1-6 armhf 4.5-2 [43.9 kB]
Get:12 http://172.17.0.1/private/ stretch-staging/main libgnutls-deb0-28 armhf 3.3.17-1 [646 kB]
Get:13 http://172.17.0.1/private/ stretch-staging/main libsasl2-modules-db armhf 2.1.26.dfsg1-13 [65.5 kB]
Get:14 http://172.17.0.1/private/ stretch-staging/main libsasl2-2 armhf 2.1.26.dfsg1-13 [97.2 kB]
Get:15 http://172.17.0.1/private/ stretch-staging/main libldap-2.4-2 armhf 2.4.42+dfsg-1+rpi1 [197 kB]
Get:16 http://172.17.0.1/private/ stretch-staging/main libmagic1 armhf 1:5.22+15-2 [244 kB]
Get:17 http://172.17.0.1/private/ stretch-staging/main libxml2 armhf 2.9.1+dfsg1-5 [703 kB]
Get:18 http://172.17.0.1/private/ stretch-staging/main cmake-data all 3.2.2-2 [1046 kB]
Get:19 http://172.17.0.1/private/ stretch-staging/main liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:20 http://172.17.0.1/private/ stretch-staging/main libarchive13 armhf 3.1.2-11+b1 [230 kB]
Get:21 http://172.17.0.1/private/ stretch-staging/main libkeyutils1 armhf 1.5.9-7 [11.5 kB]
Get:22 http://172.17.0.1/private/ stretch-staging/main libkrb5support0 armhf 1.13.2+dfsg-2 [55.9 kB]
Get:23 http://172.17.0.1/private/ stretch-staging/main libk5crypto3 armhf 1.13.2+dfsg-2 [109 kB]
Get:24 http://172.17.0.1/private/ stretch-staging/main libkrb5-3 armhf 1.13.2+dfsg-2 [260 kB]
Get:25 http://172.17.0.1/private/ stretch-staging/main libgssapi-krb5-2 armhf 1.13.2+dfsg-2 [130 kB]
Get:26 http://172.17.0.1/private/ stretch-staging/main libidn11 armhf 1.32-1 [168 kB]
Get:27 http://172.17.0.1/private/ stretch-staging/main librtmp1 armhf 2.4+20150115.gita107cef-1+b1 [54.5 kB]
Get:28 http://172.17.0.1/private/ stretch-staging/main libssh2-1 armhf 1.5.0-2 [122 kB]
Get:29 http://172.17.0.1/private/ stretch-staging/main libssl1.0.0 armhf 1.0.2d-1 [882 kB]
Get:30 http://172.17.0.1/private/ stretch-staging/main libcurl3 armhf 7.44.0-1 [238 kB]
Get:31 http://172.17.0.1/private/ stretch-staging/main libexpat1 armhf 2.1.0-7 [59.8 kB]
Get:32 http://172.17.0.1/private/ stretch-staging/main libjsoncpp0v5 armhf 0.10.5-1 [66.2 kB]
Get:33 http://172.17.0.1/private/ stretch-staging/main cmake armhf 3.2.2-2+b1 [2094 kB]
Get:34 http://172.17.0.1/private/ stretch-staging/main libglib2.0-0 armhf 2.44.1-1.1 [2312 kB]
Get:35 http://172.17.0.1/private/ stretch-staging/main libcroco3 armhf 0.6.8-3 [121 kB]
Get:36 http://172.17.0.1/private/ stretch-staging/main libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:37 http://172.17.0.1/private/ stretch-staging/main file armhf 1:5.22+15-2 [59.9 kB]
Get:38 http://172.17.0.1/private/ stretch-staging/main gettext-base armhf 0.19.5.1-1 [118 kB]
Get:39 http://172.17.0.1/private/ stretch-staging/main d-shlibs all 0.62 [16.9 kB]
Get:40 http://172.17.0.1/private/ stretch-staging/main gettext armhf 0.19.5.1-1 [1386 kB]
Get:41 http://172.17.0.1/private/ stretch-staging/main intltool-debian all 0.35.0+20060710.2 [25.9 kB]
Get:42 http://172.17.0.1/private/ stretch-staging/main po-debconf all 1.0.18 [248 kB]
Get:43 http://172.17.0.1/private/ stretch-staging/main debhelper all 9.20150811 [817 kB]
Get:44 http://172.17.0.1/private/ stretch-staging/main help2man armhf 1.47.1 [150 kB]
Get:45 http://172.17.0.1/private/ stretch-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:46 http://172.17.0.1/private/ stretch-staging/main libjsoncpp-dev armhf 0.10.5-1 [490 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 16.6 MB in 4s (3625 kB/s)
Selecting previously unselected package groff-base.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 12820 files and directories currently installed.)
Preparing to unpack .../groff-base_1.22.3-1_armhf.deb ...
Unpacking groff-base (1.22.3-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../bsdmainutils_9.0.6_armhf.deb ...
Unpacking bsdmainutils (9.0.6) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../libpipeline1_1.4.1-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.4.1-1) ...
Preparing to unpack .../zlib1g_1%3a1.2.8.dfsg-2+b1_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.8.dfsg-2+b1) over (1:1.2.8.dfsg-2) ...
Setting up zlib1g:armhf (1:1.2.8.dfsg-2+b1) ...
Processing triggers for libc-bin (2.19-19) ...
Selecting previously unselected package man-db.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 13126 files and directories currently installed.)
Preparing to unpack .../man-db_2.7.2-1_armhf.deb ...
Unpacking man-db (2.7.2-1) ...
Selecting previously unselected package libasprintf0v5:armhf.
Preparing to unpack .../libasprintf0v5_0.19.5.1-1_armhf.deb ...
Unpacking libasprintf0v5:armhf (0.19.5.1-1) ...
Selecting previously unselected package libnettle6:armhf.
Preparing to unpack .../libnettle6_3.1.1-4_armhf.deb ...
Unpacking libnettle6:armhf (3.1.1-4) ...
Selecting previously unselected package libhogweed4:armhf.
Preparing to unpack .../libhogweed4_3.1.1-4_armhf.deb ...
Unpacking libhogweed4:armhf (3.1.1-4) ...
Selecting previously unselected package libffi6:armhf.
Preparing to unpack .../libffi6_3.2.1-3_armhf.deb ...
Unpacking libffi6:armhf (3.2.1-3) ...
Selecting previously unselected package libp11-kit0:armhf.
Preparing to unpack .../libp11-kit0_0.23.1-3_armhf.deb ...
Unpacking libp11-kit0:armhf (0.23.1-3) ...
Selecting previously unselected package libtasn1-6:armhf.
Preparing to unpack .../libtasn1-6_4.5-2_armhf.deb ...
Unpacking libtasn1-6:armhf (4.5-2) ...
Selecting previously unselected package libgnutls-deb0-28:armhf.
Preparing to unpack .../libgnutls-deb0-28_3.3.17-1_armhf.deb ...
Unpacking libgnutls-deb0-28:armhf (3.3.17-1) ...
Selecting previously unselected package libsasl2-modules-db:armhf.
Preparing to unpack .../libsasl2-modules-db_2.1.26.dfsg1-13_armhf.deb ...
Unpacking libsasl2-modules-db:armhf (2.1.26.dfsg1-13) ...
Selecting previously unselected package libsasl2-2:armhf.
Preparing to unpack .../libsasl2-2_2.1.26.dfsg1-13_armhf.deb ...
Unpacking libsasl2-2:armhf (2.1.26.dfsg1-13) ...
Selecting previously unselected package libldap-2.4-2:armhf.
Preparing to unpack .../libldap-2.4-2_2.4.42+dfsg-1+rpi1_armhf.deb ...
Unpacking libldap-2.4-2:armhf (2.4.42+dfsg-1+rpi1) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../libmagic1_1%3a5.22+15-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.22+15-2) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../libxml2_2.9.1+dfsg1-5_armhf.deb ...
Unpacking libxml2:armhf (2.9.1+dfsg1-5) ...
Selecting previously unselected package cmake-data.
Preparing to unpack .../cmake-data_3.2.2-2_all.deb ...
Unpacking cmake-data (3.2.2-2) ...
Selecting previously unselected package liblzo2-2:armhf.
Preparing to unpack .../liblzo2-2_2.08-1.2_armhf.deb ...
Unpacking liblzo2-2:armhf (2.08-1.2) ...
Selecting previously unselected package libarchive13:armhf.
Preparing to unpack .../libarchive13_3.1.2-11+b1_armhf.deb ...
Unpacking libarchive13:armhf (3.1.2-11+b1) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../libkeyutils1_1.5.9-7_armhf.deb ...
Unpacking libkeyutils1:armhf (1.5.9-7) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../libkrb5support0_1.13.2+dfsg-2_armhf.deb ...
Unpacking libkrb5support0:armhf (1.13.2+dfsg-2) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../libk5crypto3_1.13.2+dfsg-2_armhf.deb ...
Unpacking libk5crypto3:armhf (1.13.2+dfsg-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../libkrb5-3_1.13.2+dfsg-2_armhf.deb ...
Unpacking libkrb5-3:armhf (1.13.2+dfsg-2) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../libgssapi-krb5-2_1.13.2+dfsg-2_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.13.2+dfsg-2) ...
Selecting previously unselected package libidn11:armhf.
Preparing to unpack .../libidn11_1.32-1_armhf.deb ...
Unpacking libidn11:armhf (1.32-1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../librtmp1_2.4+20150115.gita107cef-1+b1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20150115.gita107cef-1+b1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../libssh2-1_1.5.0-2_armhf.deb ...
Unpacking libssh2-1:armhf (1.5.0-2) ...
Selecting previously unselected package libssl1.0.0:armhf.
Preparing to unpack .../libssl1.0.0_1.0.2d-1_armhf.deb ...
Unpacking libssl1.0.0:armhf (1.0.2d-1) ...
Selecting previously unselected package libcurl3:armhf.
Preparing to unpack .../libcurl3_7.44.0-1_armhf.deb ...
Unpacking libcurl3:armhf (7.44.0-1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.1.0-7_armhf.deb ...
Unpacking libexpat1:armhf (2.1.0-7) ...
Selecting previously unselected package libjsoncpp0v5:armhf.
Preparing to unpack .../libjsoncpp0v5_0.10.5-1_armhf.deb ...
Unpacking libjsoncpp0v5:armhf (0.10.5-1) ...
Selecting previously unselected package cmake.
Preparing to unpack .../cmake_3.2.2-2+b1_armhf.deb ...
Unpacking cmake (3.2.2-2+b1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../libglib2.0-0_2.44.1-1.1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.44.1-1.1) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../libcroco3_0.6.8-3_armhf.deb ...
Unpacking libcroco3:armhf (0.6.8-3) ...
Selecting previously unselected package libunistring0:armhf.
Preparing to unpack .../libunistring0_0.9.3-5.2_armhf.deb ...
Unpacking libunistring0:armhf (0.9.3-5.2) ...
Selecting previously unselected package file.
Preparing to unpack .../file_1%3a5.22+15-2_armhf.deb ...
Unpacking file (1:5.22+15-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../gettext-base_0.19.5.1-1_armhf.deb ...
Unpacking gettext-base (0.19.5.1-1) ...
Selecting previously unselected package d-shlibs.
Preparing to unpack .../archives/d-shlibs_0.62_all.deb ...
Unpacking d-shlibs (0.62) ...
Selecting previously unselected package gettext.
Preparing to unpack .../gettext_0.19.5.1-1_armhf.deb ...
Unpacking gettext (0.19.5.1-1) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../intltool-debian_0.35.0+20060710.2_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.2) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../po-debconf_1.0.18_all.deb ...
Unpacking po-debconf (1.0.18) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../debhelper_9.20150811_all.deb ...
Unpacking debhelper (9.20150811) ...
Selecting previously unselected package help2man.
Preparing to unpack .../help2man_1.47.1_armhf.deb ...
Unpacking help2man (1.47.1) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-2+b1_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Selecting previously unselected package libjsoncpp-dev:armhf.
Preparing to unpack .../libjsoncpp-dev_0.10.5-1_armhf.deb ...
Unpacking libjsoncpp-dev:armhf (0.10.5-1) ...
Selecting previously unselected package sbuild-build-depends-bamtools-dummy.
Preparing to unpack .../sbuild-build-depends-bamtools-dummy.deb ...
Unpacking sbuild-build-depends-bamtools-dummy (0.invalid.0) ...
Setting up groff-base (1.22.3-1) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-1) ...
Setting up man-db (2.7.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libasprintf0v5:armhf (0.19.5.1-1) ...
Setting up libnettle6:armhf (3.1.1-4) ...
Setting up libhogweed4:armhf (3.1.1-4) ...
Setting up libffi6:armhf (3.2.1-3) ...
Setting up libp11-kit0:armhf (0.23.1-3) ...
Setting up libtasn1-6:armhf (4.5-2) ...
Setting up libgnutls-deb0-28:armhf (3.3.17-1) ...
Setting up libsasl2-modules-db:armhf (2.1.26.dfsg1-13) ...
Setting up libsasl2-2:armhf (2.1.26.dfsg1-13) ...
Setting up libldap-2.4-2:armhf (2.4.42+dfsg-1+rpi1) ...
Setting up libmagic1:armhf (1:5.22+15-2) ...
Setting up libxml2:armhf (2.9.1+dfsg1-5) ...
Setting up cmake-data (3.2.2-2) ...
Setting up liblzo2-2:armhf (2.08-1.2) ...
Setting up libarchive13:armhf (3.1.2-11+b1) ...
Setting up libkeyutils1:armhf (1.5.9-7) ...
Setting up libkrb5support0:armhf (1.13.2+dfsg-2) ...
Setting up libk5crypto3:armhf (1.13.2+dfsg-2) ...
Setting up libkrb5-3:armhf (1.13.2+dfsg-2) ...
Setting up libgssapi-krb5-2:armhf (1.13.2+dfsg-2) ...
Setting up libidn11:armhf (1.32-1) ...
Setting up librtmp1:armhf (2.4+20150115.gita107cef-1+b1) ...
Setting up libssh2-1:armhf (1.5.0-2) ...
Setting up libssl1.0.0:armhf (1.0.2d-1) ...
Setting up libcurl3:armhf (7.44.0-1) ...
Setting up libexpat1:armhf (2.1.0-7) ...
Setting up libjsoncpp0v5:armhf (0.10.5-1) ...
Setting up cmake (3.2.2-2+b1) ...
Setting up libglib2.0-0:armhf (2.44.1-1.1) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.8-3) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up file (1:5.22+15-2) ...
Setting up gettext-base (0.19.5.1-1) ...
Setting up d-shlibs (0.62) ...
Setting up gettext (0.19.5.1-1) ...
Setting up intltool-debian (0.35.0+20060710.2) ...
Setting up po-debconf (1.0.18) ...
Setting up debhelper (9.20150811) ...
Setting up help2man (1.47.1) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up libjsoncpp-dev:armhf (0.10.5-1) ...
Setting up sbuild-build-depends-bamtools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.19-19) ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.1-1 dpkg-dev_1.18.2 g++-4.9_4.9.3-4 g++-5_5.2.1-16+rpi1 gcc-4.9_4.9.3-4 gcc-5_5.2.1-16+rpi1 libc6-dev_2.19-19 libstdc++-4.9-dev_4.9.3-4 libstdc++-5-dev_5.2.1-16+rpi1 libstdc++6_5.2.1-16+rpi1 linux-libc-dev_3.16.7-ckt4-1+rpi1+b2
Package versions: acl_2.2.52-2 adduser_3.113+nmu3 apt_1.0.9.10 base-files_9.2+rpi1 base-passwd_3.5.38 bash_4.3-13 binutils_2.25.1-1 bsdmainutils_9.0.6 bsdutils_1:2.26.2-9 build-essential_11.7 bzip2_1.0.6-8 cmake_3.2.2-2+b1 cmake-data_3.2.2-2 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.2.1-4+rpi1 cpp-4.9_4.9.3-4 cpp-5_5.2.1-16+rpi1 d-shlibs_0.62 dash_0.5.7-4 debconf_1.5.57 debfoster_2.7-2 debhelper_9.20150811 debianutils_4.5.1 diffutils_1:3.3-1 dmsetup_2:1.02.104-1 dpkg_1.18.2 dpkg-dev_1.18.2 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.22+15-2 findutils_4.4.2-9 g++_4:5.2.1-4+rpi1 g++-4.9_4.9.3-4 g++-5_5.2.1-16+rpi1 gcc_4:5.2.1-4+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.4-4 gcc-4.9_4.9.3-4 gcc-4.9-base_4.9.3-4 gcc-5_5.2.1-16+rpi1 gcc-5-base_5.2.1-16+rpi1 gettext_0.19.5.1-1 gettext-base_0.19.5.1-1 gnupg_1.4.19-5 gpgv_1.4.19-5 grep_2.21-2 groff-base_1.22.3-1 gzip_1.6-4 help2man_1.47.1 hostname_3.15 init_1.23 init-system-helpers_1.23 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.2 klibc-utils_2.0.4-2+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.9.2-3 libapt-pkg4.12_1.0.9.10 libarchive13_3.1.2-11+b1 libasan1_4.9.3-4 libasan2_5.2.1-16+rpi1 libasprintf0v5_0.19.5.1-1 libatomic1_5.2.1-16+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.4-1 libaudit1_1:2.4.4-1 libblkid1_2.26.2-9 libbz2-1.0_1.0.6-8 libc-bin_2.19-19 libc-dev-bin_2.19-19 libc6_2.19-19 libc6-dev_2.19-19 libcap2_1:2.24-11 libcap2-bin_1:2.24-11 libcc1-0_5.2.1-16+rpi1 libcloog-isl4_0.18.3-1 libcomerr2_1.42.13-1 libcroco3_0.6.8-3 libcryptsetup4_2:1.6.6-5 libcurl3_7.44.0-1 libdb5.3_5.3.28-9 libdbus-1-3_1.8.20-1 libdebconfclient0_0.195 libdevmapper1.02.1_2:1.02.104-1 libdpkg-perl_1.18.2 libdrm2_2.4.64-1 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.26.2-9 libffi6_3.2.1-3 libgc1c2_1:7.2d-6.4 libgcc-4.9-dev_4.9.3-4 libgcc-5-dev_5.2.1-16+rpi1 libgcc1_1:5.2.1-16+rpi1 libgcrypt20_1.6.3-2 libgdbm3_1.8.3-13.1 libglib2.0-0_2.44.1-1.1 libgmp10_2:6.0.0+dfsg-7+rpi1 libgnutls-deb0-28_3.3.17-1 libgomp1_5.2.1-16+rpi1 libgpg-error0_1.19-2 libgssapi-krb5-2_1.13.2+dfsg-2 libhogweed4_3.1.1-4 libidn11_1.32-1 libisl13_0.14-2 libjsoncpp-dev_0.10.5-1 libjsoncpp0v5_0.10.5-1 libk5crypto3_1.13.2+dfsg-2 libkeyutils1_1.5.9-7 libklibc_2.0.4-2+rpi1 libkmod2_21-1 libkrb5-3_1.13.2+dfsg-2 libkrb5support0_1.13.2+dfsg-2 libldap-2.4-2_2.4.42+dfsg-1+rpi1 liblocale-gettext-perl_1.05-9 liblzma5_5.1.1alpha+20120614-2.1 liblzo2-2_2.08-1.2 libmagic1_1:5.22+15-2 libmount1_2.26.2-9 libmpc3_1.0.3-1 libmpfr4_3.1.3-1 libncurses5_6.0+20150810-1 libncursesw5_6.0+20150810-1 libnettle6_3.1.1-4 libnih-dbus1_1.0.3-4.3 libnih1_1.0.3-4.3 libp11-kit0_0.23.1-3 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_2:8.35-7 libpipeline1_1.4.1-1 libpng12-0_1.2.50-2 libprocps3_2:3.3.9-9 libprocps4_2:3.3.10-2 libreadline6_6.3-8 librtmp1_2.4+20150115.gita107cef-1+b1 libsasl2-2_2.1.26.dfsg1-13 libsasl2-modules-db_2.1.26.dfsg1-13 libseccomp2_2.2.3-1 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-2 libslang2_2.3.0-2 libsmartcols1_2.26.2-9 libss2_1.42.13-1 libssh2-1_1.5.0-2 libssl1.0.0_1.0.2d-1 libstdc++-4.9-dev_4.9.3-4 libstdc++-5-dev_5.2.1-16+rpi1 libstdc++6_5.2.1-16+rpi1 libsystemd0_225-1 libtasn1-6_4.5-2 libtext-charwidth-perl_0.04-7+b4 libtext-iconv-perl_1.7-5+b5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_2.3000-2 libtinfo5_6.0+20150810-1 libubsan0_5.2.1-16+rpi1 libudev1_225-1 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-25 libustr-1.0-1_1.0.4-5 libuuid1_2.26.2-9 libxml2_2.9.1+dfsg1-5 linux-libc-dev_3.16.7-ckt4-1+rpi1+b2 login_1:4.2-3 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.2-1 mawk_1.3.3-17 mount_2.26.2-9 mountall_2.54 multiarch-support_2.19-19 ncurses-base_6.0+20150810-1 ncurses-bin_6.0+20150810-1 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 plymouth_0.9.0-9 po-debconf_1.0.18 procps_2:3.3.10-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-bamtools-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_225-1 systemd-sysv_225-1 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-1 tzdata_2015f-1 udev_225-1 util-linux_2.26.2-9 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun Jul 5 13:59:24 2015 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./bamtools_2.4.0+dfsg-1.dsc
dpkg-source: info: extracting bamtools in bamtools-2.4.0+dfsg
dpkg-source: info: unpacking bamtools_2.4.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking bamtools_2.4.0+dfsg-1.debian.tar.xz
dpkg-source: info: applying 0001-ignore-thirdparty-and-fix-jsoncpp.patch
dpkg-source: info: applying 0002-support-out-of-source-build.patch
dpkg-source: info: applying 0003-remove-custom-ExportHeader-function-use-install-inst.patch
dpkg-source: info: applying 0005-Install-libbamtools-to-lib.-Installing-libraries-to-.patch
dpkg-source: info: applying 0006-Doxygen-reproducibility
Check disc space
────────────────
Sufficient free space for build
Hack binNMU version
───────────────────
Created changelog entry for binNMU version 2.4.0+dfsg-1+b1
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-6a12c1e9-e335-45bc-ba62-322dbaba31a6
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package bamtools
dpkg-buildpackage: source version 2.4.0+dfsg-1+b1
dpkg-buildpackage: source distribution stretch-staging
dpkg-source --before-build bamtools-2.4.0+dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel
dh_testdir -O--parallel
dh_auto_clean -O--parallel
dh_clean -O--parallel
debian/rules build-arch
dh build-arch --parallel
dh_testdir -a -O--parallel
dh_auto_configure -a -O--parallel
cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None
-- The C compiler identification is GNU 5.2.1
-- The CXX compiler identification is GNU 5.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done
-- Generating done
-- Build files have been written to: /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf
dh_auto_build -a -O--parallel
make -j4
make[1]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/«BUILDDIR»/bamtools-2.4.0+dfsg -B/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/depend
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/depend
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools.dir/DependInfo.cmake --color=
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools-static.dir/DependInfo.cmake --color=
Scanning dependencies of target BamTools-static
Scanning dependencies of target BamTools
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/build
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/build
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 1
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 39
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 2
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 40
[ 2%] [ 2%] [ 4%] [ 4%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamMultiReader.cpp.o
Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamAlignment.cpp.o
Building CXX object src/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o
Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamMultiReader.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamAlignment.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamAlignment.cpp
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/BamAlignment.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamAlignment.cpp
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamMultiReader.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamMultiReader.cpp
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamMultiReader.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 41
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 3
[ 5%] [ 6%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamReader.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/BamReader.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamReader.cpp
Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamReader.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamReader.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamReader.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 4
[ 7%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamWriter.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/BamWriter.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamWriter.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 42
[ 8%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/BamWriter.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/BamWriter.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/BamWriter.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 43
[ 9%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamHeader.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamHeader.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamHeader.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 5
[ 10%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamHeader.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamHeader.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamHeader.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 6
[ 11%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgram.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamProgram.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamProgram.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 44
[ 12%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamProgram.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamProgram.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamProgram.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 7
[ 13%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgramChain.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamProgramChain.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 45
[ 14%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamProgramChain.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamProgramChain.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamProgramChain.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 8
[ 15%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroup.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamReadGroup.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 9
[ 17%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamReadGroupDictionary.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 10
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 46
[ 18%] [ 19%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequence.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamSequence.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamSequence.cpp
Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamReadGroup.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamReadGroup.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamReadGroup.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 47
[ 20%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamReadGroupDictionary.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamReadGroupDictionary.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamReadGroupDictionary.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 11
[ 21%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamSequenceDictionary.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 48
[ 22%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamSequence.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamSequence.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamSequence.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 12
[ 23%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamHeader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 49
[ 24%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/SamSequenceDictionary.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/SamSequenceDictionary.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/SamSequenceDictionary.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 13
[ 25%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamMultiReader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 50
[ 26%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamHeader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamHeader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamHeader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 14
[ 27%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 51
[ 28%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamMultiReader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamMultiReader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamMultiReader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 52
[ 29%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamRandomAccessController_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 15
[ 30%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamReader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 53
[ 31%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamReader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamReader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamReader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 16
[ 32%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamWriter_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 54
[ 34%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/bam/BamWriter_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/bam/BamWriter_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/bam/BamWriter_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 55
[ 35%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/index/BamIndexFactory_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/index/BamIndexFactory_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/index/BamIndexFactory_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 17
[ 36%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/index/BamIndexFactory_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 18
[ 37%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/index/BamStandardIndex_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 56
[ 38%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/index/BamStandardIndex_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/index/BamStandardIndex_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/index/BamStandardIndex_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 19
[ 39%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/index/BamToolsIndex_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 57
[ 40%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/index/BamToolsIndex_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/index/BamToolsIndex_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/index/BamToolsIndex_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 20
[ 41%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamDeviceFactory_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 58
[ 42%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamDeviceFactory_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamDeviceFactory_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamDeviceFactory_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 21
[ 43%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamFile_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 59
[ 44%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamFile_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamFile_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamFile_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 22
[ 45%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamFtp_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 60
[ 46%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamFtp_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamFtp_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamFtp_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 23
[ 47%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamHttp_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 61
[ 48%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamHttp_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamHttp_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamHttp_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 24
[ 50%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamPipe_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 62
[ 51%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BamPipe_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BamPipe_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BamPipe_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 25
[ 52%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BgzfStream_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 26
[ 53%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/ByteArray_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 63
[ 54%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/BgzfStream_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/BgzfStream_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/BgzfStream_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 27
[ 55%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/HostAddress_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 64
[ 56%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/ByteArray_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/ByteArray_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/ByteArray_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 65
[ 57%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/HostAddress_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/HostAddress_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/HostAddress_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 28
[ 58%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/HostInfo_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 29
[ 59%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/HttpHeader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 30
[ 60%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/ILocalIODevice_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 31
[ 61%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/RollingBuffer_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 32
[ 62%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/TcpSocket_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 66
[ 63%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/HostInfo_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/HostInfo_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/HostInfo_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 33
[ 64%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 34
[ 65%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/TcpSocketEngine_unix_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 67
[ 67%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/HttpHeader_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/HttpHeader_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/HttpHeader_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 35
[ 68%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/sam/SamFormatParser_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 36
[ 69%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 37
[ 70%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 38
[ 71%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/utils/BamException_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 68
[ 72%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/ILocalIODevice_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/ILocalIODevice_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/ILocalIODevice_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 69
[ 73%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/RollingBuffer_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/RollingBuffer_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/RollingBuffer_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 70
[ 74%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/TcpSocket_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/TcpSocket_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/TcpSocket_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 71
[ 75%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 72
[ 76%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/io/TcpSocketEngine_unix_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 73
[ 77%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/sam/SamFormatParser_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatParser_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/sam/SamFormatParser_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 74
[ 78%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/sam/SamFormatPrinter_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 75
[ 79%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/sam/SamHeaderValidator_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp
Linking CXX shared library ../../lib/libbamtools.so
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -shared -Wl,-soname,libbamtools.so.2.4.0 -o ../../lib/libbamtools.so.2.4.0 CMakeFiles/BamTools.dir/BamAlignment.cpp.o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o CMakeFiles/BamTools.dir/BamReader.cpp.o CMakeFiles/BamTools.dir/BamWriter.cpp.o CMakeFiles/BamTools.dir/SamHeader.cpp.o CMakeFiles/BamTools.dir/SamProgram.cpp.o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o CMakeFiles/BamTools.dir/SamSequence.cpp.o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -lz
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -E cmake_symlink_library ../../lib/libbamtools.so.2.4.0 ../../lib/libbamtools.so.2.4.0 ../../lib/libbamtools.so
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38
[ 79%] Built target BamTools
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/depend
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils/CMakeFiles/BamTools-utils.dir/DependInfo.cmake --color=
Scanning dependencies of target BamTools-utils
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/build
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 77
[ 80%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils/bamtools_fasta.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 76
[ 81%] Building CXX object src/api/CMakeFiles/BamTools-static.dir/internal/utils/BamException_p.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -Wall -fPIC -o CMakeFiles/BamTools-static.dir/internal/utils/BamException_p.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api/internal/utils/BamException_p.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 78
[ 82%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils/bamtools_options.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 79
[ 84%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils/bamtools_pileup_engine.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 80
[ 85%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -Wall -fPIC -o CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils/bamtools_utilities.cpp
Linking CXX static library ../../lib/libbamtools.a
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -P CMakeFiles/BamTools-static.dir/cmake_clean_target.cmake
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools-static.dir/link.txt --verbose=1
/usr/bin/ar cq ../../lib/libbamtools.a CMakeFiles/BamTools-static.dir/BamAlignment.cpp.o CMakeFiles/BamTools-static.dir/BamMultiReader.cpp.o CMakeFiles/BamTools-static.dir/BamReader.cpp.o CMakeFiles/BamTools-static.dir/BamWriter.cpp.o CMakeFiles/BamTools-static.dir/SamHeader.cpp.o CMakeFiles/BamTools-static.dir/SamProgram.cpp.o CMakeFiles/BamTools-static.dir/SamProgramChain.cpp.o CMakeFiles/BamTools-static.dir/SamReadGroup.cpp.o CMakeFiles/BamTools-static.dir/SamReadGroupDictionary.cpp.o CMakeFiles/BamTools-static.dir/SamSequence.cpp.o CMakeFiles/BamTools-static.dir/SamSequenceDictionary.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamHeader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamMultiReader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamRandomAccessController_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamReader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/bam/BamWriter_p.cpp.o CMakeFiles/BamTools-static.dir/internal/index/BamIndexFactory_p.cpp.o CMakeFiles/BamTools-static.dir/internal/index/BamStandardIndex_p.cpp.o CMakeFiles/BamTools-static.dir/internal/index/BamToolsIndex_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamDeviceFactory_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamFile_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamFtp_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamHttp_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BamPipe_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/BgzfStream_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/ByteArray_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/HostAddress_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/HostInfo_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/HttpHeader_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/ILocalIODevice_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/RollingBuffer_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/TcpSocket_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_p.cpp.o CMakeFiles/BamTools-static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatParser_p.cpp.o CMakeFiles/BamTools-static.dir/internal/sam/SamFormatPrinter_p.cpp.o CMakeFiles/BamTools-static.dir/internal/sam/SamHeaderValidator_p.cpp.o CMakeFiles/BamTools-static.dir/internal/utils/BamException_p.cpp.o
/usr/bin/ranlib ../../lib/libbamtools.a
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76
[ 85%] Built target BamTools-static
Linking CXX static library ../../lib/libbamtools-utils.a
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/cmake -P CMakeFiles/BamTools-utils.dir/cmake_clean_target.cmake
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools-utils.dir/link.txt --verbose=1
/usr/bin/ar cq ../../lib/libbamtools-utils.a CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o
/usr/bin/ranlib ../../lib/libbamtools-utils.a
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 77 78 79 80
[ 85%] Built target BamTools-utils
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/depend
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit/CMakeFiles/bamtools_cmd.dir/DependInfo.cmake --color=
Scanning dependencies of target bamtools_cmd
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/build
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 81
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 82
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 83
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 84
[ 86%] [ 87%] [ 88%] [ 89%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o
Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_convert.cpp
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_coverage.cpp
Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_filter.cpp
Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_count.cpp
/«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_filter.cpp: In member function 'bool BamTools::FilterTool::FilterToolPrivate::ParseScript()':
/«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_filter.cpp:650:50: warning: 'std::__cxx11::string Json::Reader::getFormatedErrorMessages() const' is deprecated: Use getFormattedErrorMessages() instead. [-Wdeprecated-declarations]
<< reader.getFormatedErrorMessages();
^
In file included from /usr/include/jsoncpp/json/json.h:11:0,
from /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_filter.cpp:19:
/usr/include/jsoncpp/json/reader.h:102:15: note: declared here
std::string getFormatedErrorMessages() const;
^
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 85
[ 90%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_header.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 86
[ 91%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_index.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 87
[ 92%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_merge.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 88
[ 93%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_random.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 89
[ 94%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_resolve.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 90
[ 95%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_revert.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 91
[ 96%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_sort.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 92
[ 97%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_split.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 93
[ 98%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools_stats.cpp
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 94
[100%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src -I/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/include -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/api -I/«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o -c /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit/bamtools.cpp
Linking CXX executable ../../bin/bamtools
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/cmake -E cmake_link_script CMakeFiles/bamtools_cmd.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o -o ../../bin/bamtools-2.4.0 -rdynamic ../../lib/libbamtools-utils.a -ljsoncpp ../../lib/libbamtools.so.2.4.0 -lz -Wl,-rpath,/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/lib:
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit && /usr/bin/cmake -E cmake_symlink_executable ../../bin/bamtools-2.4.0 ../../bin/bamtools
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 81 82 83 84 85 86 87 88 89 90 91 92 93 94
[100%] Built target bamtools_cmd
make[2]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
dh_auto_test -a -O--parallel
fakeroot debian/rules binary-arch
dh binary-arch --parallel
dh_testroot -a -O--parallel
dh_prep -a -O--parallel
dh_auto_install -a -O--parallel
make -j4 install DESTDIR=/«BUILDDIR»/bamtools-2.4.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/«BUILDDIR»/bamtools-2.4.0+dfsg -B/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/depend
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/depend
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools.dir/DependInfo.cmake --color=
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/api/CMakeFiles/BamTools-static.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/build
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/api/CMakeFiles/BamTools-static.dir/build.make src/api/CMakeFiles/BamTools-static.dir/build
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/api/CMakeFiles/BamTools.dir/build'.
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/api/CMakeFiles/BamTools-static.dir/build'.
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76
[ 40%] Built target BamTools
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/depend
[ 80%] Built target BamTools-static
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/utils /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/utils/CMakeFiles/BamTools-utils.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/build
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/utils/CMakeFiles/BamTools-utils.dir/build'.
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 77 78 79 80
[ 85%] Built target BamTools-utils
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/depend
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
cd /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«BUILDDIR»/bamtools-2.4.0+dfsg /«BUILDDIR»/bamtools-2.4.0+dfsg/src/toolkit /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/src/toolkit/CMakeFiles/bamtools_cmd.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/build
make[3]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/toolkit/CMakeFiles/bamtools_cmd.dir/build'.
make[3]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 81 82 83 84 85 86 87 88 89 90 91 92 93 94
[100%] Built target bamtools_cmd
make[2]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "Release"
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/shared/bamtools_global.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/lib/libbamtools.so.2.4.0
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/lib/libbamtools.so
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/lib/libbamtools.a
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/api_global.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamAlgorithms.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamAlignment.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamAux.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamConstants.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamIndex.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamMultiReader.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamReader.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/BamWriter.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/IBamIODevice.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamConstants.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamHeader.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamProgram.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamProgramChain.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamReadGroup.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamReadGroupDictionary.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamSequence.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/SamSequenceDictionary.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/api/algorithms/Sort.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/include/bamtools/bamtools_version.h
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/bin/bamtools-2.4.0
-- Installing: /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/bin/bamtools
-- Removed runtime path from "/«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/bin/bamtools-2.4.0"
make[1]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg/obj-arm-linux-gnueabihf'
debian/rules override_dh_install
make[1]: Entering directory '/«BUILDDIR»/bamtools-2.4.0+dfsg'
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
debian/tmp/usr/lib/lib*.so
Library package automatic movement utility
--> zlib1g-dev package exists.
set -e
install -d -m 755 debian/libbamtools-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libbamtools2.4.0/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/libbamtools.a debian/libbamtools-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/libbamtools.so debian/libbamtools-dev/usr/lib/arm-linux-gnueabihf
mv /«BUILDDIR»/bamtools-2.4.0+dfsg/debian/tmp/usr/lib/libbamtools.so.2.4.0 debian/libbamtools2.4.0/usr/lib/arm-linux-gnueabihf
PKGDEV=libbamtools-dev
PKGSHL=libbamtools2.4.0
install -d -m 755 debian/libbamtools-dev/usr/include
mv debian/tmp/usr/include/bamtools debian/libbamtools-dev/usr/include
dh_install
# no need to install different versions of bamtools
rm -rf debian/bamtools/usr/bin/bamtools
mv debian/bamtools/usr/bin/bamtools-[0-9]* debian/bamtools/usr/bin/bamtools
make[1]: Leaving directory '/«BUILDDIR»/bamtools-2.4.0+dfsg'
dh_installdocs -a -O--parallel
dh_installchangelogs -a -O--parallel
dh_installman -a -O--parallel
dh_lintian -a -O--parallel
dh_perl -a -O--parallel
dh_link -a -O--parallel
dh_compress -a -O--parallel
dh_fixperms -a -O--parallel
dh_strip -a -O--parallel
dh_makeshlibs -a -O--parallel
dh_shlibdeps -a -O--parallel
dpkg-shlibdeps: warning: debian/bamtools/usr/bin/bamtools contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/bamtools/usr/bin/bamtools was not linked against libz.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libbamtools2.4.0/usr/lib/arm-linux-gnueabihf/libbamtools.so.2.4.0 found in none of the libraries
dh_installdeb -a -O--parallel
dh_gencontrol -a -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package libbamtools-dev: unused substitution variable ${devlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O--parallel
dh_builddeb -a -O--parallel
dpkg-deb: building package 'bamtools' in '../bamtools_2.4.0+dfsg-1+b1_armhf.deb'.
dpkg-deb: building package 'libbamtools-dev' in '../libbamtools-dev_2.4.0+dfsg-1+b1_armhf.deb'.
dpkg-deb: building package 'libbamtools2.4.0' in '../libbamtools2.4.0_2.4.0+dfsg-1+b1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../bamtools_2.4.0+dfsg-1+b1_armhf.changes
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build bamtools-2.4.0+dfsg
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20150912-1651
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
bamtools_2.4.0+dfsg-1+b1_armhf.changes:
───────────────────────────────────────
Format: 1.8
Date: Sun, 05 Jul 2015 15:41:35 +0200
Source: bamtools (2.4.0+dfsg-1)
Binary: bamtools libbamtools-dev libbamtools2.4.0
Binary-Only: yes
Architecture: armhf
Version: 2.4.0+dfsg-1+b1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
bamtools - toolkit for manipulating BAM (genome alignment) files
libbamtools-dev - C++ API for manipulating BAM (genome alignment) files
libbamtools2.4.0 - dynamic library for manipulating BAM (genome alignment) files
Changes:
bamtools (2.4.0+dfsg-1+b1) stretch-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
2697c514d4ce0054fc874d1b66b8e507f2a01887 161068 bamtools_2.4.0+dfsg-1+b1_armhf.deb
1e42742c875bc528615363b833685968ffc24fcb 209238 libbamtools-dev_2.4.0+dfsg-1+b1_armhf.deb
03e5839b1534286a6cbea1c6598f681ab65b35eb 157386 libbamtools2.4.0_2.4.0+dfsg-1+b1_armhf.deb
Checksums-Sha256:
41250c0e6cc66cb83b8282c9ece4849c847f4d0d7690f74e8e655e63ca8b57ea 161068 bamtools_2.4.0+dfsg-1+b1_armhf.deb
1c2f300abdc749f640e0a73b5e0d468884c0f4338354f66a1a8aa2519922c045 209238 libbamtools-dev_2.4.0+dfsg-1+b1_armhf.deb
662c838ef2e9e42b5e8291bc0353390f2a684bea2582cbc283fe2e1cf0cb5af6 157386 libbamtools2.4.0_2.4.0+dfsg-1+b1_armhf.deb
Files:
7038be470dd780d8924962eb09e85130 161068 science optional bamtools_2.4.0+dfsg-1+b1_armhf.deb
eec619861f523fac066db64a6eb2d9f0 209238 libdevel optional libbamtools-dev_2.4.0+dfsg-1+b1_armhf.deb
5a52f2bef9c7208d0ac80136529851ee 157386 libs optional libbamtools2.4.0_2.4.0+dfsg-1+b1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
bamtools_2.4.0+dfsg-1+b1_armhf.deb
──────────────────────────────────
new debian package, version 2.0.
size 161068 bytes: control archive=1352 bytes.
1840 bytes, 38 lines control
416 bytes, 6 lines md5sums
Package: bamtools
Source: bamtools (2.4.0+dfsg-1)
Version: 2.4.0+dfsg-1+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 512
Depends: libbamtools2.4.0, libc6 (>= 2.4), libgcc1 (>= 1:4.4.0), libjsoncpp0v5, libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: toolkit for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the bamtools command-line toolkit.
.
Available bamtools commands:
convert Converts between BAM and a number of other formats
count Prints number of alignments in BAM file(s)
coverage Prints coverage statistics from the input BAM file
filter Filters BAM file(s) by user-specified criteria
header Prints BAM header information
index Generates index for BAM file
merge Merge multiple BAM files into single file
random Select random alignments from existing BAM file(s), intended more
as a testing tool.
resolve Resolves paired-end reads (marking the IsProperPair flag as needed)
revert Removes duplicate marks and restores original base qualities
sort Sorts the BAM file according to some criteria
split Splits a BAM file on user-specified property, creating a new BAM
output file for each value found
stats Prints some basic statistics from input BAM file(s)
drwxr-xr-x root/root 0 2015-09-12 16:51 ./
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/bin/
-rwxr-xr-x root/root 506316 2015-09-12 16:51 ./usr/bin/bamtools
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/doc/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/doc/bamtools/
-rw-r--r-- root/root 225 2015-09-12 16:44 ./usr/share/doc/bamtools/changelog.Debian.armhf.gz
-rw-r--r-- root/root 536 2015-09-12 16:44 ./usr/share/doc/bamtools/changelog.Debian.gz
-rw-r--r-- root/root 1551 2015-07-05 13:57 ./usr/share/doc/bamtools/copyright
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/lintian/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 79 2015-07-05 13:57 ./usr/share/lintian/overrides/bamtools
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/man/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/man/man1/
-rw-r--r-- root/root 792 2015-09-12 16:51 ./usr/share/man/man1/bamtools.1.gz
libbamtools-dev_2.4.0+dfsg-1+b1_armhf.deb
─────────────────────────────────────────
new debian package, version 2.0.
size 209238 bytes: control archive=1526 bytes.
866 bytes, 21 lines control
1969 bytes, 26 lines md5sums
Package: libbamtools-dev
Source: bamtools (2.4.0+dfsg-1)
Version: 2.4.0+dfsg-1+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1115
Depends: libbamtools2.4.0 (= 2.4.0+dfsg-1+b1)
Section: libdevel
Priority: optional
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: C++ API for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the developers API package.
drwxr-xr-x root/root 0 2015-09-12 16:51 ./
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/include/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/include/bamtools/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/include/bamtools/api/
-rw-r--r-- root/root 847 2015-06-16 16:50 ./usr/include/bamtools/api/BamAlgorithms.h
-rw-r--r-- root/root 23756 2015-06-16 16:50 ./usr/include/bamtools/api/BamAlignment.h
-rw-r--r-- root/root 14652 2015-06-16 16:50 ./usr/include/bamtools/api/BamAux.h
-rw-r--r-- root/root 9682 2015-06-16 16:50 ./usr/include/bamtools/api/BamConstants.h
-rw-r--r-- root/root 2885 2015-06-16 16:50 ./usr/include/bamtools/api/BamIndex.h
-rw-r--r-- root/root 4676 2015-06-16 16:50 ./usr/include/bamtools/api/BamMultiReader.h
-rw-r--r-- root/root 4285 2015-06-16 16:50 ./usr/include/bamtools/api/BamReader.h
-rw-r--r-- root/root 2208 2015-06-16 16:50 ./usr/include/bamtools/api/BamWriter.h
-rw-r--r-- root/root 3022 2015-06-16 16:50 ./usr/include/bamtools/api/IBamIODevice.h
-rw-r--r-- root/root 3725 2015-06-16 16:50 ./usr/include/bamtools/api/SamConstants.h
-rw-r--r-- root/root 2959 2015-06-16 16:50 ./usr/include/bamtools/api/SamHeader.h
-rw-r--r-- root/root 2389 2015-06-16 16:50 ./usr/include/bamtools/api/SamProgram.h
-rw-r--r-- root/root 3127 2015-06-16 16:50 ./usr/include/bamtools/api/SamProgramChain.h
-rw-r--r-- root/root 3449 2015-06-16 16:50 ./usr/include/bamtools/api/SamReadGroup.h
-rw-r--r-- root/root 3281 2015-06-16 16:50 ./usr/include/bamtools/api/SamReadGroupDictionary.h
-rw-r--r-- root/root 2567 2015-06-16 16:50 ./usr/include/bamtools/api/SamSequence.h
-rw-r--r-- root/root 3248 2015-06-16 16:50 ./usr/include/bamtools/api/SamSequenceDictionary.h
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/include/bamtools/api/algorithms/
-rw-r--r-- root/root 12112 2015-06-16 16:50 ./usr/include/bamtools/api/algorithms/Sort.h
-rw-r--r-- root/root 757 2015-06-16 16:50 ./usr/include/bamtools/api/api_global.h
-rw-r--r-- root/root 852 2015-09-12 16:44 ./usr/include/bamtools/bamtools_version.h
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/include/bamtools/shared/
-rw-r--r-- root/root 2790 2015-06-16 16:50 ./usr/include/bamtools/shared/bamtools_global.h
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/lib/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 1000918 2015-09-12 16:51 ./usr/lib/arm-linux-gnueabihf/libbamtools.a
lrwxrwxrwx root/root 0 2015-09-12 16:51 ./usr/lib/arm-linux-gnueabihf/libbamtools.so -> libbamtools.so.2.4.0
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/
drwxr-xr-x root/root 0 2015-07-05 13:57 ./usr/share/cmake/
drwxr-xr-x root/root 0 2015-07-05 13:57 ./usr/share/cmake/bamtools/
-rw-r--r-- root/root 1574 2015-07-05 13:57 ./usr/share/cmake/bamtools/bamtools-config.cmake
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/doc/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/doc/libbamtools-dev/
-rw-r--r-- root/root 225 2015-09-12 16:44 ./usr/share/doc/libbamtools-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root 536 2015-09-12 16:44 ./usr/share/doc/libbamtools-dev/changelog.Debian.gz
-rw-r--r-- root/root 1551 2015-07-05 13:57 ./usr/share/doc/libbamtools-dev/copyright
libbamtools2.4.0_2.4.0+dfsg-1+b1_armhf.deb
──────────────────────────────────────────
new debian package, version 2.0.
size 157386 bytes: control archive=1066 bytes.
906 bytes, 21 lines control
334 bytes, 4 lines md5sums
135 bytes, 7 lines * postinst #!/bin/sh
132 bytes, 7 lines * postrm #!/bin/sh
35 bytes, 1 lines shlibs
Package: libbamtools2.4.0
Source: bamtools (2.4.0+dfsg-1)
Version: 2.4.0+dfsg-1+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 508
Depends: libc6 (>= 2.15), libgcc1 (>= 1:4.4.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Section: libs
Priority: optional
Homepage: https://github.com/pezmaster31/bamtools/wiki
Description: dynamic library for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the runtime library.
drwxr-xr-x root/root 0 2015-09-12 16:51 ./
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/lib/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 503952 2015-09-12 16:51 ./usr/lib/arm-linux-gnueabihf/libbamtools.so.2.4.0
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/doc/
drwxr-xr-x root/root 0 2015-09-12 16:51 ./usr/share/doc/libbamtools2.4.0/
-rw-r--r-- root/root 225 2015-09-12 16:44 ./usr/share/doc/libbamtools2.4.0/changelog.Debian.armhf.gz
-rw-r--r-- root/root 536 2015-09-12 16:44 ./usr/share/doc/libbamtools2.4.0/changelog.Debian.gz
-rw-r--r-- root/root 1551 2015-07-05 13:57 ./usr/share/doc/libbamtools2.4.0/copyright
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 93776
Build-Time: 432
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 280
Job: bamtools_2.4.0+dfsg-1
Machine Architecture: armhf
Package: bamtools
Package-Time: 770
Source-Version: 2.4.0+dfsg-1
Space: 93776
Status: successful
Version: 2.4.0+dfsg-1+b1
────────────────────────────────────────────────────────────────────────────────
Finished at 20150912-1651
Build needed 00:12:50, 93776k disc space