bagel →
1.2.2-1 →
armhf → 2019-06-30 15:03:30
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| bagel 1.2.2-1 (armhf) Sun, 30 Jun 2019 14:43:32 +0000 |
+==============================================================================+
Package: bagel
Version: 1.2.2-1
Source Version: 1.2.2-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-a518ec9d-a3e1-4fc1-8d46-fe01efaadab8' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.4 MB in 33s (732 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'bagel' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/bagel.git
Please use:
git clone https://salsa.debian.org/debichem-team/bagel.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 41.6 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main bagel 1.2.2-1 (dsc) [2085 B]
Get:2 http://172.17.0.1/private buster-staging/main bagel 1.2.2-1 (tar) [41.6 MB]
Get:3 http://172.17.0.1/private buster-staging/main bagel 1.2.2-1 (diff) [7024 B]
Fetched 41.6 MB in 15s (2831 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/bagel-2v7mOh/bagel-1.2.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/bagel-2v7mOh' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-6zQ7a5/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-6zQ7a5/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Packages [430 B]
Fetched 2106 B in 1s (2818 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 89 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15903 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
dpkg-deb: building package 'sbuild-build-depends-bagel-dummy' in '/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive/sbuild-build-depends-bagel-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-bagel-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Sources [551 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ Packages [635 B]
Fetched 2519 B in 1s (3519 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install bagel build dependencies (apt-based resolver)
-----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales
libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cpp cpp-8 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file g++ g++-8 gcc gcc-8
gcc-8-base gettext gettext-base gfortran gfortran-8 groff-base hwloc-nox
icu-devtools intltool-debian libarchive-zip-perl libasan5 libatomic1
libblas-dev libblas3 libboost-chrono1.67.0 libboost-python-dev
libboost-python1.67-dev libboost-python1.67.0 libboost-regex-dev
libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev
libboost-serialization1.67-dev libboost-serialization1.67.0
libboost-system1.67.0 libboost-test-dev libboost-test1.67-dev
libboost-test1.67.0 libboost-timer1.67.0 libboost1.67-dev libbsd0 libcc1-0
libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libgcc-8-dev libgcc1 libgfortran-8-dev libgfortran5 libglib2.0-0 libgomp1
libhwloc5 libicu-dev libicu63 liblapack-dev liblapack3 libltdl7 libmagic-mgc
libmagic1 libmpdec2 libmpich-dev libmpich12 libpipeline1 libpython-dev
libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal
libpython3.7-stdlib libsigsegv2 libstdc++-8-dev libstdc++6 libtool libubsan1
libuchardet0 libxc-dev libxc5 libxml2 m4 man-db mime-support mpich
po-debconf python python-dev python-minimal python2 python2-dev
python2-minimal python2.7 python2.7-dev python2.7-minimal python3
python3-dev python3-distutils python3-lib2to3 python3-minimal python3.7
python3.7-dev python3.7-minimal
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation cpp-doc gcc-8-locales dh-make gcc-8-doc libstdc++6-8-dbg
gcc-multilib manpages-dev flex bison gdb gcc-doc libgcc1-dbg libgomp1-dbg
libitm1-dbg libatomic1-dbg libasan5-dbg liblsan0-dbg libtsan0-dbg
libubsan1-dbg libmpx2-dbg libquadmath0-dbg gettext-doc libasprintf-dev
libgettextpo-dev gfortran-doc gfortran-8-doc libgfortran5-dbg
libcoarrays-dev groff liblapack-doc libboost1.67-doc gccxml
libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev
libboost-context1.67-dev libboost-coroutine1.67-dev
libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
libboost-filesystem1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
libboost-program-options1.67-dev libboost-random1.67-dev
libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev
libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
libhwloc-contrib-plugins icu-doc libstdc++-8-doc libtool-doc gcj-jdk m4-doc
apparmor less www-browser mpich-doc libmail-box-perl python-doc python-tk
python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv
python3.7-venv python3.7-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libhwloc-plugins libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base gfortran gfortran-8 groff-base hwloc-nox icu-devtools
intltool-debian libarchive-zip-perl libblas-dev libblas3
libboost-chrono1.67.0 libboost-python-dev libboost-python1.67-dev
libboost-python1.67.0 libboost-regex-dev libboost-regex1.67-dev
libboost-regex1.67.0 libboost-serialization-dev
libboost-serialization1.67-dev libboost-serialization1.67.0
libboost-system1.67.0 libboost-test-dev libboost-test1.67-dev
libboost-test1.67.0 libboost-timer1.67.0 libboost1.67-dev libbsd0 libcroco3
libelf1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran-8-dev
libgfortran5 libglib2.0-0 libhwloc5 libicu-dev libicu63 liblapack-dev
liblapack3 libltdl7 libmagic-mgc libmagic1 libmpdec2 libmpich-dev libmpich12
libpipeline1 libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib
libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib
libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libtool libuchardet0
libxc-dev libxc5 libxml2 m4 man-db mime-support mpich po-debconf python
python-dev python-minimal python2 python2-dev python2-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-dev python3-distutils
python3-lib2to3 python3-minimal python3.7 python3.7-dev python3.7-minimal
sbuild-build-depends-bagel-dummy
The following packages will be upgraded:
cpp cpp-8 g++ g++-8 gcc gcc-8 gcc-8-base libasan5 libatomic1 libcc1-0
libexpat1 libgcc-8-dev libgcc1 libgomp1 libstdc++-8-dev libstdc++6 libubsan1
17 upgraded, 101 newly installed, 0 to remove and 72 not upgraded.
Need to get 172 MB of archives.
After this operation, 513 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6zQ7a5/apt_archive ./ sbuild-build-depends-bagel-dummy 0.invalid.0 [920 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-2 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 8.3.0-6+rpi1 [37.9 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf gcc-8-base armhf 8.3.0-6+rpi1 [191 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:8.3.0-6+rpi1 [36.5 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 8.3.0-6+rpi1 [64.3 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 8.3.0-6+rpi1 [8108 B]
Get:9 http://172.17.0.1/private buster-staging/main armhf libasan5 armhf 8.3.0-6+rpi1 [317 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libubsan1 armhf 8.3.0-6+rpi1 [103 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf g++-8 armhf 8.3.0-6+rpi1 [7464 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libstdc++-8-dev armhf 8.3.0-6+rpi1 [1545 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libgcc-8-dev armhf 8.3.0-6+rpi1 [595 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf gcc-8 armhf 8.3.0-6+rpi1 [7223 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf cpp-8 armhf 8.3.0-6+rpi1 [6787 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 8.3.0-6+rpi1 [326 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-2 [1230 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.16-2 [395 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.16-2 [1093 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf python2-minimal armhf 2.7.16-1 [41.4 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.16-1 [21.0 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.62 [37.2 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.6-2 [77.1 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.16-2 [1844 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.16-2 [305 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libpython2-stdlib armhf 2.7.16-1 [20.8 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.16-1 [20.8 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf python2 armhf 2.7.16-1 [41.6 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.16-1 [22.8 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.3-2 [583 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.3-2 [1464 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.3-1 [36.6 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.3-2 [1664 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.3-2 [330 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.3-1 [20.0 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.3-1 [61.5 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-4 [242 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-4 [110 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-4 [65.3 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf g++ armhf 4:8.3.0-1+rpi2 [1632 B]
Get:52 http://172.17.0.1/private buster-staging/main armhf gcc armhf 4:8.3.0-1+rpi2 [5200 B]
Get:53 http://172.17.0.1/private buster-staging/main armhf cpp armhf 4:8.3.0-1+rpi2 [19.6 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.3-2 [1077 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf debhelper all 12.1.1 [1016 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.3-1 [76.7 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.3-1 [142 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20190308 [99.3 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.3.0-6+rpi1 [206 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libgfortran-8-dev armhf 8.3.0-6+rpi1 [249 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf gfortran-8 armhf 8.3.0-6+rpi1 [7202 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:8.3.0-1+rpi2 [1428 B]
Get:76 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-9 [387 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libhwloc5 armhf 1.11.12-3+rpi1 [86.3 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf hwloc-nox armhf 1.11.12-3+rpi1 [144 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-6 [163 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-2 [113 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libboost-system1.67.0 armhf 1.67.0-13 [228 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libboost-chrono1.67.0 armhf 1.67.0-13 [231 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libboost1.67-dev armhf 1.67.0-13 [8386 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libboost-python1.67.0 armhf 1.67.0-13 [306 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.16-2 [873 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-2 [127 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.16-2 [30.9 MB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libpython2-dev armhf 2.7.16-1 [20.9 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.16-1 [20.9 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.16-2 [291 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf python2-dev armhf 2.7.16-1 [1216 B]
Get:93 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.16-1 [1192 B]
Get:94 http://172.17.0.1/private buster-staging/main armhf libpython3.7 armhf 3.7.3-2 [1252 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libpython3.7-dev armhf 3.7.3-2 [47.2 MB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.7.3-1 [20.1 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf python3.7-dev armhf 3.7.3-2 [522 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.7.3-1 [1264 B]
Get:99 http://172.17.0.1/private buster-staging/main armhf libboost-python1.67-dev armhf 1.67.0-13 [318 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libboost-python-dev armhf 1.67.0.1+b1 [4224 B]
Get:101 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.67.0 armhf 1.67.0-13 [430 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-6 [8841 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.67-dev armhf 1.67.0-13 [527 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libboost-regex-dev armhf 1.67.0.1+b1 [4192 B]
Get:105 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.67.0 armhf 1.67.0-13 [300 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.67-dev armhf 1.67.0-13 [365 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libboost-serialization-dev armhf 1.67.0.1+b1 [4152 B]
Get:108 http://172.17.0.1/private buster-staging/main armhf libboost-timer1.67.0 armhf 1.67.0-13 [229 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libboost-test1.67.0 armhf 1.67.0-13 [421 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libboost-test1.67-dev armhf 1.67.0-13 [491 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libboost-test-dev armhf 1.67.0.1+b1 [3960 B]
Get:112 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-2 [1551 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libmpich12 armhf 3.3-3 [1028 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf mpich armhf 3.3-3 [332 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libmpich-dev armhf 3.3-3 [1198 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libxc5 armhf 4.2.3-3 [2169 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libxc-dev armhf 4.2.3-3 [2314 kB]
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.5 g++-8_8.3.0-6+rpi1 gcc-8_8.3.0-6+rpi1 libc6-dev_2.28-7+rpi1 libstdc++-8-dev_8.3.0-6+rpi1 libstdc++6_8.3.0-6+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~rc3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20190110 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.3.0-1+rpi2 cpp-8_8.3.0-6+rpi1 dash_0.5.10.2-5 dbus_1.12.12-1 dbus-user-session_1.12.12-1 debconf_1.5.70 debhelper_12.1.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-python_3.20190308 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-2 dpkg_1.19.5 dpkg-dev_1.19.5 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1+rpi2 g++-8_8.3.0-6+rpi1 gcc_4:8.3.0-1+rpi2 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.3.0-6+rpi1 gcc-8-base_8.3.0-6+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.3.0-1+rpi2 gfortran-8_8.3.0-6+rpi1 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 hwloc-nox_1.11.12-3+rpi1 icu-devtools_63.1-6 inetutils-ping_2:1.9.4-7 init-system-helpers_1.56+nmu1 initramfs-tools_0.133 initramfs-tools-core_0.133 intltool-debian_0.35.0+20060710.5 klibc-utils_2.0.6-1+rpi1 kmod_26-1 krb5-locales_1.17-1 libacl1_2.2.52-5 libapparmor1_2.13.2-7 libapt-pkg5.0_1.8.0~rc3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libasan5_8.3.0-6+rpi1 libassuan0_2.5.2-1 libatomic1_8.3.0-6+rpi1 libattr1_1:2.4.47-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libbinutils_2.31.1-11+rpi1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libboost-chrono1.67.0_1.67.0-13 libboost-python-dev_1.67.0.1+b1 libboost-python1.67-dev_1.67.0-13 libboost-python1.67.0_1.67.0-13 libboost-regex-dev_1.67.0.1+b1 libboost-regex1.67-dev_1.67.0-13 libboost-regex1.67.0_1.67.0-13 libboost-serialization-dev_1.67.0.1+b1 libboost-serialization1.67-dev_1.67.0-13 libboost-serialization1.67.0_1.67.0-13 libboost-system1.67.0_1.67.0-13 libboost-test-dev_1.67.0.1+b1 libboost-test1.67-dev_1.67.0-13 libboost-test1.67.0_1.67.0-13 libboost-timer1.67.0_1.67.0-13 libboost1.67-dev_1.67.0-13 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-7+rpi1 libc-dev-bin_2.28-7+rpi1 libc6_2.28-7+rpi1 libc6-dev_2.28-7+rpi1 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_8.3.0-6+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28+dfsg1-0.3 libdbus-1-3_1.12.12-1 libdebconfclient0_0.247 libdevmapper1.02.1_2:1.02.155-2 libdpkg-perl_1.19.5 libdrm-common_2.4.97-1+rpi1 libdrm2_2.4.97-1+rpi1 libelf1_0.176-1.1 libexpat1_2.2.6-2 libexpat1-dev_2.2.6-2 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.2-1 libgcc-8-dev_8.3.0-6+rpi1 libgcc1_1:8.3.0-6+rpi1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-3 libgdbm3_1.8.3-14 libgdbm6_1.18.1-3 libgfortran-8-dev_8.3.0-6+rpi1 libgfortran5_8.3.0-6+rpi1 libglib2.0-0_2.58.3-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.3.0-6+rpi1 libgpg-error-l10n_1.35-1 libgpg-error0_1.35-1 libgssapi-krb5-2_1.17-1 libhogweed4_3.4.1-1 libhwloc5_1.11.12-3+rpi1 libicu-dev_63.1-6 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libip4tc0_1.8.2-3 libisl19_0.20-2 libjson-c3_0.12.1+ds-2 libk5crypto3_1.17-1 libkeyutils1_1.6-2 libklibc_2.0.6-1+rpi1 libkmod2_26-1 libkrb5-3_1.17-1 libkrb5support0_1.17-1 libksba8_1.3.5-2 liblapack-dev_3.8.0-2 liblapack3_3.8.0-2 libldap-2.4-2_2.4.47+dfsg-3+rpi1 libldap-common_2.4.47+dfsg-3+rpi1 libltdl7_2.4.6-9 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libmpich-dev_3.3-3 libmpich12_3.3-3 libncurses5_6.1+20181013-2 libncurses6_6.1+20181013-2 libncursesw5_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnpth0_1.6-1 libnss-systemd_241-1+rpi1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam-systemd_241-1+rpi1 libpam0g_1.3.1-5 libpcre3_2:8.39-11+rpi1 libperl5.24_5.24.1-4 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libplymouth4_0.9.4-1 libpng16-16_1.6.36-5 libprocps7_2:3.3.15-2 libpython-dev_2.7.16-1 libpython-stdlib_2.7.16-1 libpython2-dev_2.7.16-1 libpython2-stdlib_2.7.16-1 libpython2.7_2.7.16-2 libpython2.7-dev_2.7.16-2 libpython2.7-minimal_2.7.16-2 libpython2.7-stdlib_2.7.16-2 libpython3-dev_3.7.3-1 libpython3-stdlib_3.7.3-1 libpython3.7_3.7.3-2 libpython3.7-dev_3.7.3-2 libpython3.7-minimal_3.7.3-2 libpython3.7-stdlib_3.7.3-2 libreadline7_7.0-5 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-2 libss2_1.44.5-1 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.3.0-6+rpi1 libstdc++6_8.3.0-6+rpi1 libsystemd0_241-1+rpi1 libtasn1-6_4.13-3 libtinfo5_6.1+20181013-2 libtinfo6_6.1+20181013-2 libtool_2.4.6-9 libubsan1_8.3.0-6+rpi1 libuchardet0_0.0.6-3 libudev1_241-1+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libxc-dev_4.2.3-3 libxc5_4.2.3-3 libxml2_2.9.4+dfsg1-7+b1 libzstd1_1.3.8+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-2 mawk_1.3.3-17 mime-support_3.62 mount_2.33.1-0.1 mpich_3.3-3 multiarch-support_2.28-7+rpi1 nano_3.2-2 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 netbase_5.6 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-4 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 python_2.7.16-1 python-dev_2.7.16-1 python-minimal_2.7.16-1 python2_2.7.16-1 python2-dev_2.7.16-1 python2-minimal_2.7.16-1 python2.7_2.7.16-2 python2.7-dev_2.7.16-2 python2.7-minimal_2.7.16-2 python3_3.7.3-1 python3-dev_3.7.3-1 python3-distutils_3.7.3-1 python3-lib2to3_3.7.3-1 python3-minimal_3.7.3-1 python3.7_3.7.3-2 python3.7-dev_3.7.3-2 python3.7-minimal_3.7.3-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-bagel-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_241-1+rpi1 systemd-sysv_241-1+rpi1 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-1 udev_241-1+rpi1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Jan 1 11:20:19 2019 UTC
gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./bagel_1.2.2-1.dsc
dpkg-source: info: extracting bagel in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking bagel_1.2.2.orig.tar.gz
dpkg-source: info: unpacking bagel_1.2.2-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying skip_failing_testcases.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-a518ec9d-a3e1-4fc1-8d46-fe01efaadab8
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package bagel
dpkg-buildpackage: info: source version 1.2.2-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --max-parallel=1 --with autoreconf
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
rm -rf /<<PKGBUILDDIR>>/src/testsuite
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--max-parallel=1
dh_clean -O--max-parallel=1
debian/rules build-arch
dh build-arch --max-parallel=1 --with autoreconf
dh_update_autotools_config -a -O--max-parallel=1
dh_autoreconf -a -O--max-parallel=1
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:17: installing './compile'
configure.ac:39: installing './config.guess'
configure.ac:39: installing './config.sub'
configure.ac:6: installing './install-sh'
configure.ac:6: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
if [ -f /proc/meminfo ]; then cat /proc/meminfo; fi
MemTotal: 2065928 kB
MemFree: 39164 kB
MemAvailable: 1905168 kB
Buffers: 5096 kB
Cached: 1845072 kB
SwapCached: 4428 kB
Active: 940840 kB
Inactive: 955540 kB
Active(anon): 31740 kB
Inactive(anon): 14728 kB
Active(file): 909100 kB
Inactive(file): 940812 kB
Unevictable: 0 kB
Mlocked: 0 kB
HighTotal: 1310720 kB
HighFree: 24932 kB
LowTotal: 755208 kB
LowFree: 14232 kB
SwapTotal: 10239996 kB
SwapFree: 10222572 kB
Dirty: 2368 kB
Writeback: 0 kB
AnonPages: 43664 kB
Mapped: 13800 kB
Shmem: 256 kB
Slab: 105404 kB
SReclaimable: 78136 kB
SUnreclaim: 27268 kB
KernelStack: 1640 kB
PageTables: 1200 kB
NFS_Unstable: 0 kB
Bounce: 0 kB
WritebackTmp: 0 kB
CommitLimit: 11272960 kB
Committed_AS: 550164 kB
VmallocTotal: 245760 kB
VmallocUsed: 0 kB
VmallocChunk: 0 kB
CmaTotal: 16384 kB
CmaFree: 6936 kB
dh_auto_configure -- \
--datadir=/usr/share/bagel \
--libdir=/usr/lib/bagel \
--enable-static \
--disable-shared \
--with-boost \
--with-boost-libdir=/usr/lib/arm-linux-gnueabihf \
--with-libxc=yes \
--with-mpi=openmpi \
--disable-scalapack \
--enable-smith
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-boost-libdir=/usr/lib/arm-linux-gnueabihf --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for python... /usr/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/dist-packages
checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
..openmpi requested..
checking for mpicc... mpicc
checking for mpicxx... mpicxx
checking whether we are using the GNU C compiler... (cached) yes
checking whether mpicc accepts -g... (cached) yes
checking for mpicc option to accept ISO C89... (cached) none needed
checking whether mpicc understands -c and -o together... (cached) yes
checking dependency style of mpicc... (cached) none
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether mpicxx accepts -g... (cached) yes
checking dependency style of mpicxx... (cached) none
checking whether mpicxx supports C++11 features by default... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... yes
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... mpicxx -E
checking for ld used by mpicxx... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking for mpicxx option to produce PIC... -fPIC -DPIC
checking if mpicxx PIC flag -fPIC -DPIC works... yes
checking if mpicxx static flag -static works... yes
checking if mpicxx supports -c -o file.o... yes
checking if mpicxx supports -c -o file.o... (cached) yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for boostlib >= 1.53... yes
checking whether the Boost::Regex library is available... yes
checking for exit in -lboost_regex... yes
checking whether the Boost::Unit_Test_Framework library is available... yes
configure: WARNING: BOOST_CPPFLAGS -I/usr/include
checking whether the Boost::Serialization library is available... yes
checking for exit in -lboost_serialization... yes
checking xc.h usability... yes
checking xc.h presence... yes
checking for xc.h... yes
checking for main in -lxc... yes
checking for zgemm3m_... no
checking mpi.h usability... yes
checking mpi.h presence... yes
checking for mpi.h... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/util/Makefile
config.status: creating src/util/input/Makefile
config.status: creating src/util/io/Makefile
config.status: creating src/util/parallel/Makefile
config.status: creating src/util/math/Makefile
config.status: creating src/asd/multisite/Makefile
config.status: creating src/asd/dimer/Makefile
config.status: creating src/asd/dmrg/Makefile
config.status: creating src/asd/orbital/Makefile
config.status: creating src/asd/Makefile
config.status: creating src/wfn/Makefile
config.status: creating src/grad/Makefile
config.status: creating src/integral/Makefile
config.status: creating src/scf/Makefile
config.status: creating src/df/Makefile
config.status: creating src/prop/Makefile
config.status: creating src/smith/Makefile
config.status: creating src/molecule/Makefile
config.status: creating src/pt2/Makefile
config.status: creating src/ci/Makefile
config.status: creating src/ci/ciutil/Makefile
config.status: creating src/ci/fci/Makefile
config.status: creating src/ci/zfci/Makefile
config.status: creating src/ci/ras/Makefile
config.status: creating src/response/Makefile
config.status: creating src/multi/Makefile
config.status: creating src/multi/casscf/Makefile
config.status: creating src/multi/zcasscf/Makefile
config.status: creating src/mat1e/Makefile
config.status: creating src/opt/Makefile
config.status: creating src/basis/Makefile
config.status: creating bagel_config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a -O--max-parallel=1
make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Making all in src
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Making all in util
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/util'
Making all in parallel
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o process.lo process.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c process.cc -o process.o
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o mpi_interface.lo mpi_interface.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c mpi_interface.cc -o mpi_interface.o
mpi_interface.cc: In member function 'void bagel::MPI_Interface::broadcast(size_t*, size_t, int) const':
mpi_interface.cc:148:32: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpi_interface.cc: In member function 'void bagel::MPI_Interface::allgather(const size_t*, size_t, size_t*, size_t) const':
mpi_interface.cc:201:32: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpi_interface.cc: In member function 'int bagel::MPI_Interface::request_send(const size_t*, size_t, int, int)':
mpi_interface.cc:267:32: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: *** [Makefile:408: mpi_interface.lo] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
make[4]: *** [Makefile:462: all-recursive] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/util'
make[3]: *** [Makefile:625: all-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: *** [Makefile:422: all-recursive] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: *** [Makefile:354: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: make -j1 returned exit code 2
make: *** [debian/rules:12: build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2019-06-30T15:03:24Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 0
Build-Time: 164
Distribution: buster-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 946
Job: bagel_1.2.2-1
Machine Architecture: armhf
Package: bagel
Package-Time: 1192
Source-Version: 1.2.2-1
Space: 0
Status: failed
Version: 1.2.2-1
--------------------------------------------------------------------------------
Finished at 2019-06-30T15:03:24Z
Build needed 00:00:00, 0k disc space