bagel →
1.1.1-2 →
armhf → 2018-05-13 08:49:45
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| bagel 1.1.1-2 (armhf) Sun, 13 May 2018 08:33:27 +0000 |
+==============================================================================+
Package: bagel
Version: 1.1.1-2
Source Version: 1.1.1-2
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-09357d7f-bc3b-4447-891d-d55703004317' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.5 MB]
Fetched 23.3 MB in 31s (757 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'bagel' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/bagel.git
Please use:
git clone https://salsa.debian.org/debichem-team/bagel.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 41.5 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main bagel 1.1.1-2 (dsc) [2062 B]
Get:2 http://172.17.0.1/private buster-staging/main bagel 1.1.1-2 (tar) [41.5 MB]
Get:3 http://172.17.0.1/private buster-staging/main bagel 1.1.1-2 (diff) [5796 B]
Fetched 41.5 MB in 13s (3132 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/bagel-zv3byU/bagel-1.1.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/bagel-zv3byU' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-D65CJ2/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-D65CJ2/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-D65CJ2/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3062 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 27 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (5597 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15733 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
dpkg-deb: building package 'sbuild-build-depends-bagel-dummy' in '/<<BUILDDIR>>/resolver-D65CJ2/apt_archive/sbuild-build-depends-bagel-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-bagel-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Sources [551 B]
Get:5 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ Packages [637 B]
Fetched 2521 B in 1s (3791 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install bagel build dependencies (apt-based resolver)
-----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libnss-systemd
libpam-systemd libsasl2-modules openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gcc-6-base gettext
gettext-base gfortran gfortran-7 groff-base hwloc-nox icu-devtools
intltool-debian libarchive-zip-perl libblas-dev libblas3
libboost-chrono1.62.0 libboost-python-dev libboost-python1.62-dev
libboost-python1.62.0 libboost-regex-dev libboost-regex1.62-dev
libboost-regex1.62.0 libboost-serialization-dev
libboost-serialization1.62-dev libboost-serialization1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libcroco3
libexpat1-dev libfile-stripnondeterminism-perl libgfortran-7-dev
libgfortran3 libgfortran4 libglib2.0-0 libhwloc5 libicu-dev libicu57
liblapack-dev liblapack3 libltdl7 libmagic-mgc libmagic1 libmpdec2
libmpich-dev libmpich12 libncursesw6 libpipeline1 libpython-dev
libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal
libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.6
libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libsigsegv2
libtimedate-perl libtinfo6 libtool libxc-dev libxc4 libxml2 m4 man-db
mime-support mpich po-debconf python python-dev python-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-dev python3-distutils
python3-lib2to3 python3-minimal python3.6 python3.6-dev python3.6-minimal
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff
liblapack-doc libboost1.62-doc gccxml libboost-atomic1.62-dev
libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-filesystem1.62-dev libboost-graph1.62-dev
libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev
libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev
libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-random1.62-dev
libboost-signals1.62-dev libboost-system1.62-dev libboost-thread1.62-dev
libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev
libboost1.62-tools-dev libmpfrc++-dev libntl-dev libhwloc-contrib-plugins
icu-doc libtool-doc gcj-jdk m4-doc apparmor less www-browser mpich-doc
libmail-box-perl python-doc python-tk python2.7-doc binfmt-support
python3-doc python3-tk python3-venv python3.6-venv python3.6-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libhwloc-plugins libgpm2 libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gcc-6-base gettext
gettext-base gfortran gfortran-7 groff-base hwloc-nox icu-devtools
intltool-debian libarchive-zip-perl libblas-dev libblas3
libboost-chrono1.62.0 libboost-python-dev libboost-python1.62-dev
libboost-python1.62.0 libboost-regex-dev libboost-regex1.62-dev
libboost-regex1.62.0 libboost-serialization-dev
libboost-serialization1.62-dev libboost-serialization1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libcroco3
libexpat1-dev libfile-stripnondeterminism-perl libgfortran-7-dev
libgfortran3 libgfortran4 libglib2.0-0 libhwloc5 libicu-dev libicu57
liblapack-dev liblapack3 libltdl7 libmagic-mgc libmagic1 libmpdec2
libmpich-dev libmpich12 libncursesw6 libpipeline1 libpython-dev
libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal
libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.6
libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libsigsegv2
libtimedate-perl libtinfo6 libtool libxc-dev libxc4 libxml2 m4 man-db
mime-support mpich po-debconf python python-dev python-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-dev python3-distutils
python3-lib2to3 python3-minimal python3.6 python3.6-dev python3.6-minimal
sbuild-build-depends-bagel-dummy
0 upgraded, 98 newly installed, 0 to remove and 27 not upgraded.
Need to get 74.4 MB/98.8 MB of archives.
After this operation, 414 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-D65CJ2/apt_archive ./ sbuild-build-depends-bagel-dummy 0.invalid.0 [924 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-1 [393 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-1 [1077 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15~rc1-1 [41.1 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libtinfo6 armhf 6.1+20180210-2 [307 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libncursesw6 armhf 6.1+20180210-2 [103 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-1 [1841 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-1 [298 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15~rc1-1 [20.5 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15~rc1-1 [155 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.5~rc1-1 [565 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.5~rc1-1 [1234 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.5~rc1-1 [1585 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.6.5~rc1-1 [79.0 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.6.5~rc1-1 [147 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.5~rc1-1 [229 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.4-1 [19.3 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180326 [93.2 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.4-1 [22.3 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf gcc-6-base armhf 6.4.0-12+rpi1 [182 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-2 [234 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-2 [106 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-2 [64.7 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 17 [16.5 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.041-1 [12.0 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.2.1 [1013 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-12 [191 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libgfortran-7-dev armhf 7.3.0-12 [232 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf gfortran-7 armhf 7.3.0-12 [5454 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:7.2.0-1d1 [1352 B]
Get:51 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-2.1 [386 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libhwloc5 armhf 1.11.10-1+rpi1 [85.7 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf hwloc-nox armhf 1.11.10-1+rpi1 [146 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-1 [103 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-1 [111 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libboost-system1.62.0 armhf 1.62.0+dfsg-5+b2 [32.6 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libboost-chrono1.62.0 armhf 1.62.0+dfsg-5+b2 [36.1 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libboost1.62-dev armhf 1.62.0+dfsg-5+b2 [7004 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libboost-python1.62.0 armhf 1.62.0+dfsg-5+b2 [120 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.15-1 [886 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.15-1 [27.6 MB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.15~rc1-1 [20.6 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.15-1 [289 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.15~rc1-1 [1212 B]
Get:65 http://172.17.0.1/private buster-staging/main armhf libpython3.6 armhf 3.6.5~rc1-1 [1229 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libpython3.6-dev armhf 3.6.5~rc1-1 [2257 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.6.4-1 [19.4 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf python3.6-dev armhf 3.6.5~rc1-1 [508 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.6.4-1 [1232 B]
Get:70 http://172.17.0.1/private buster-staging/main armhf libboost-python1.62-dev armhf 1.62.0+dfsg-5+b2 [157 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libboost-python-dev armhf 1.62.0.1+b8 [4088 B]
Get:72 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.62.0 armhf 1.62.0+dfsg-5+b2 [232 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.62-dev armhf 1.62.0+dfsg-5+b2 [325 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.62.0 armhf 1.62.0+dfsg-5+b2 [107 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.62-dev armhf 1.62.0+dfsg-5+b2 [172 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libboost-serialization-dev armhf 1.62.0.1+b8 [3926 B]
Get:77 http://172.17.0.1/private buster-staging/main armhf libboost-timer1.62.0 armhf 1.62.0+dfsg-5+b2 [34.7 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libboost-test1.62.0 armhf 1.62.0+dfsg-5+b2 [224 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libboost-test1.62-dev armhf 1.62.0+dfsg-5+b2 [290 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libboost-test-dev armhf 1.62.0.1+b8 [3734 B]
Get:81 http://172.17.0.1/private buster-staging/main armhf libgfortran3 armhf 6.4.0-12+rpi1 [166 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-1 [1518 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-1 [1577 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libmpich12 armhf 3.3~b2-7 [983 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf mpich armhf 3.3~b2-7 [907 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libmpich-dev armhf 3.3~b2-7 [1147 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libxc4 armhf 3.0.0-1 [328 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libxc-dev armhf 3.0.0-1 [378 kB]
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Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up libboost-system1.62.0:armhf (1.62.0+dfsg-5+b2) ...
Setting up libfile-stripnondeterminism-perl (0.041-1) ...
Setting up gfortran (4:7.2.0-1d1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libboost-serialization-dev:armhf (1.62.0.1+b8) ...
Setting up libpython3.6-stdlib:armhf (3.6.5~rc1-1) ...
Setting up libmpich12:armhf (3.3~b2-7) ...
Setting up gettext (0.19.8.1-6) ...
Setting up libblas-dev:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up libgfortran3:armhf (6.4.0-12+rpi1) ...
Setting up liblapack3:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncursesw6:armhf (6.1+20180210-2) ...
Setting up libboost-regex1.62.0:armhf (1.62.0+dfsg-5+b2) ...
Setting up autoconf (2.69-11) ...
Setting up libicu-dev (57.1-9) ...
Setting up file (1:5.33-2) ...
Setting up libhwloc5:armhf (1.11.10-1+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxc4:armhf (3.0.0-1) ...
Setting up libpython2.7-stdlib:armhf (2.7.15-1) ...
Setting up libboost-chrono1.62.0:armhf (1.62.0+dfsg-5+b2) ...
Setting up libpython3.6:armhf (3.6.5~rc1-1) ...
Setting up liblapack-dev:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-2.1) ...
Setting up hwloc-nox (1.11.10-1+rpi1) ...
Setting up libpython3-stdlib:armhf (3.6.4-1) ...
Setting up mpich (3.3~b2-7) ...
update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode
update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode
Setting up libboost-timer1.62.0:armhf (1.62.0+dfsg-5+b2) ...
Setting up po-debconf (1.0.20) ...
Setting up libxc-dev (3.0.0-1) ...
Setting up libboost-regex1.62-dev:armhf (1.62.0+dfsg-5+b2) ...
Setting up python2.7 (2.7.15-1) ...
Setting up libpython3.6-dev:armhf (3.6.5~rc1-1) ...
Setting up libpython-stdlib:armhf (2.7.15~rc1-1) ...
Setting up libmpich-dev:armhf (3.3~b2-7) ...
Setting up libboost-test1.62.0:armhf (1.62.0+dfsg-5+b2) ...
Setting up libpython2.7:armhf (2.7.15-1) ...
Setting up libboost-regex-dev:armhf (1.62.0.1+b8) ...
Setting up libpython2.7-dev:armhf (2.7.15-1) ...
Setting up python2.7-dev (2.7.15-1) ...
Setting up python (2.7.15~rc1-1) ...
Setting up libpython3-dev:armhf (3.6.4-1) ...
Setting up libpython-dev:armhf (2.7.15~rc1-1) ...
Setting up python-dev (2.7.15~rc1-1) ...
Setting up libboost-test1.62-dev:armhf (1.62.0+dfsg-5+b2) ...
Setting up libboost-test-dev:armhf (1.62.0.1+b8) ...
Setting up dh-python (3.20180326) ...
Setting up dh-autoreconf (17) ...
Setting up python3 (3.6.4-1) ...
Setting up dh-strip-nondeterminism (0.041-1) ...
Setting up python3-lib2to3 (3.6.5~rc1-1) ...
Setting up python3-distutils (3.6.5~rc1-1) ...
Setting up debhelper (11.2.1) ...
Setting up python3.6 (3.6.5~rc1-1) ...
Setting up python3.6-dev (3.6.5~rc1-1) ...
Setting up python3-dev (3.6.4-1) ...
Setting up libboost-python1.62-dev (1.62.0+dfsg-5+b2) ...
Setting up libboost-python-dev (1.62.0.1+b8) ...
Setting up sbuild-build-depends-bagel-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-15+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-12 gcc-7_7.3.0-12 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180414-1+rpi1 linux-libc-dev_4.15.17-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-2+b1 binutils_2.30-15+rpi1 binutils-arm-linux-gnueabihf_2.30-15+rpi1 binutils-common_2.30-15+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.4+b1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-12 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 debconf_1.5.66 debhelper_11.2.1 debianutils_4.8.4 dh-autoreconf_17 dh-python_3.20180326 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 e2fsprogs-l10n_1.44.1-2 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 g++_4:7.2.0-1d1 g++-7_7.3.0-12 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-6-base_6.4.0-12+rpi1 gcc-7_7.3.0-12 gcc-7-base_7.3.0-12 gcc-8-base_8-20180414-1+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gfortran_4:7.2.0-1d1 gfortran-7_7.3.0-12 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 hwloc-nox_1.11.10-1+rpi1 icu-devtools_57.1-9 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-12 libassuan0_2.5.1-2 libatomic1_8-20180414-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.30-15+rpi1 libblas-dev_3.8.0-1 libblas3_3.8.0-1 libblkid1_2.31.1-0.5 libboost-chrono1.62.0_1.62.0+dfsg-5+b2 libboost-python-dev_1.62.0.1+b8 libboost-python1.62-dev_1.62.0+dfsg-5+b2 libboost-python1.62.0_1.62.0+dfsg-5+b2 libboost-regex-dev_1.62.0.1+b8 libboost-regex1.62-dev_1.62.0+dfsg-5+b2 libboost-regex1.62.0_1.62.0+dfsg-5+b2 libboost-serialization-dev_1.62.0.1+b8 libboost-serialization1.62-dev_1.62.0+dfsg-5+b2 libboost-serialization1.62.0_1.62.0+dfsg-5+b2 libboost-system1.62.0_1.62.0+dfsg-5+b2 libboost-test-dev_1.62.0.1+b8 libboost-test1.62-dev_1.62.0+dfsg-5+b2 libboost-test1.62.0_1.62.0+dfsg-5+b2 libboost-timer1.62.0_1.62.0+dfsg-5+b2 libboost1.62-dev_1.62.0+dfsg-5+b2 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180414-1+rpi1 libcilkrts5_7.3.0-12 libcom-err2_1.44.1-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.91-2+rpi1 libdrm2_2.4.91-2+rpi1 libexpat1_2.2.5-3 libexpat1-dev_2.2.5-3 libext2fs2_1.44.1-2 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-1 libgcc-7-dev_7.3.0-12 libgcc1_1:8-20180414-1+rpi1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran-7-dev_7.3.0-12 libgfortran3_6.4.0-12+rpi1 libgfortran4_7.3.0-12 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180414-1+rpi1 libgpg-error0_1.29-4 libhogweed4_3.4-1 libhwloc5_1.11.10-1+rpi1 libicu-dev_57.1-9 libicu57_57.1-9 libidn11_1.33-2.2 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-4 libjson-c3_0.12.1-1.3 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libksba8_1.3.5-2 liblapack-dev_3.8.0-1 liblapack3_3.8.0-1 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblocale-gettext-perl_1.07-3+b2 libltdl7_2.4.6-2.1 liblz4-1_1.8.1.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-1 libmpich-dev_3.3~b2-7 libmpich12_3.3~b2-7 libncurses5_6.1-1 libncursesw5_6.1-1 libncursesw6_6.1+20180210-2 libnettle6_3.4-1 libnpth0_1.5-3 libnss-systemd_238-4 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpcre3_2:8.39-9 libperl5.24_5.24.1-4 libperl5.26_5.26.2-2 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.14-1 libpython-dev_2.7.15~rc1-1 libpython-stdlib_2.7.15~rc1-1 libpython2.7_2.7.15-1 libpython2.7-dev_2.7.15-1 libpython2.7-minimal_2.7.15-1 libpython2.7-stdlib_2.7.15-1 libpython3-dev_3.6.4-1 libpython3-stdlib_3.6.4-1 libpython3.6_3.6.5~rc1-1 libpython3.6-dev_3.6.5~rc1-1 libpython3.6-minimal_3.6.5~rc1-1 libpython3.6-stdlib_3.6.5~rc1-1 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180414-1+rpi1 libsystemd0_238-4 libtasn1-6_4.13-2 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtinfo6_6.1+20180210-2 libtool_2.4.6-2.1 libubsan0_7.3.0-12 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libxc-dev_3.0.0-1 libxc4_3.0.0-1 libxml2_2.9.4+dfsg1-6.1 libzstd1_1.3.3+dfsg-2+rpi1 linux-base_4.5 linux-libc-dev_4.15.17-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mime-support_3.60 mount_2.31.1-0.5 mpich_3.3~b2-7 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 netbase_5.4 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-2 perl-base_5.26.2-2 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-3 pinentry-curses_1.1.0-1 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.14-1 python_2.7.15~rc1-1 python-dev_2.7.15~rc1-1 python-minimal_2.7.15~rc1-1 python2.7_2.7.15-1 python2.7-dev_2.7.15-1 python2.7-minimal_2.7.15-1 python3_3.6.4-1 python3-dev_3.6.4-1 python3-distutils_3.6.5~rc1-1 python3-lib2to3_3.6.5~rc1-1 python3-minimal_3.6.4-1 python3.6_3.6.5~rc1-1 python3.6-dev_3.6.5~rc1-1 python3.6-minimal_3.6.5~rc1-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-bagel-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018d-1 udev_238-4 util-linux_2.31.1-0.5 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue May 8 07:45:56 2018 UTC
gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./bagel_1.1.1-2.dsc
dpkg-source: info: extracting bagel in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking bagel_1.1.1.orig.tar.gz
dpkg-source: info: unpacking bagel_1.1.1-2.debian.tar.xz
dpkg-source: info: applying skip_failing_testcases.patch
dpkg-source: info: applying add_missing_includes.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-09357d7f-bc3b-4447-891d-d55703004317
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package bagel
dpkg-buildpackage: info: source version 1.1.1-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build bagel-1.1.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel --with autoreconf
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
rm -rf /<<PKGBUILDDIR>>/src/testsuite
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean -O--parallel
debian/rules build-arch
dh build-arch --parallel --with autoreconf
dh_update_autotools_config -a -O--parallel
dh_autoreconf -a -O--parallel
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:17: installing './compile'
configure.ac:39: installing './config.guess'
configure.ac:39: installing './config.sub'
configure.ac:6: installing './install-sh'
configure.ac:6: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
--datadir=/usr/share/bagel \
--libdir=/usr/lib/bagel \
--enable-static \
--disable-shared \
--with-boost \
--with-libxc=yes \
--with-mpi=openmpi \
--disable-scalapack \
--enable-smith
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for python... /usr/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/dist-packages
checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
..openmpi requested..
checking for mpicc... mpicc
checking for mpicxx... mpicxx
checking whether we are using the GNU C compiler... (cached) yes
checking whether mpicc accepts -g... (cached) yes
checking for mpicc option to accept ISO C89... (cached) none needed
checking whether mpicc understands -c and -o together... (cached) yes
checking dependency style of mpicc... (cached) none
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether mpicxx accepts -g... (cached) yes
checking dependency style of mpicxx... (cached) none
checking whether mpicxx supports C++11 features by default... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... yes
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... mpicxx -E
checking for ld used by mpicxx... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking for mpicxx option to produce PIC... -fPIC -DPIC
checking if mpicxx PIC flag -fPIC -DPIC works... yes
checking if mpicxx static flag -static works... yes
checking if mpicxx supports -c -o file.o... yes
checking if mpicxx supports -c -o file.o... (cached) yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for boostlib >= 1.53... yes
checking for main in -lboost_serialization-gcc-mt... no
checking for main in -lboost_serialization-mt... no
checking for main in -lboost_serialization... yes
checking if boost::serialization works... yes
checking for main in -lboost_regex-gcc-mt... no
checking for main in -lboost_regex-mt... no
checking for main in -lboost_regex... yes
checking for main in -lboost_unit_test_framework-gcc-mt... no
checking for main in -lboost_unit_test_framework-mt... no
checking for main in -lboost_unit_test_framework... yes
checking xc.h usability... yes
checking xc.h presence... yes
checking for xc.h... yes
checking for main in -lxc... yes
checking for zgemm3m_... no
checking mpi.h usability... yes
checking mpi.h presence... yes
checking for mpi.h... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/util/Makefile
config.status: creating src/util/input/Makefile
config.status: creating src/util/io/Makefile
config.status: creating src/util/parallel/Makefile
config.status: creating src/util/math/Makefile
config.status: creating src/asd/multisite/Makefile
config.status: creating src/asd/dimer/Makefile
config.status: creating src/asd/dmrg/Makefile
config.status: creating src/asd/orbital/Makefile
config.status: creating src/asd/Makefile
config.status: creating src/wfn/Makefile
config.status: creating src/grad/Makefile
config.status: creating src/integral/Makefile
config.status: creating src/scf/Makefile
config.status: creating src/df/Makefile
config.status: creating src/prop/Makefile
config.status: creating src/smith/Makefile
config.status: creating src/molecule/Makefile
config.status: creating src/pt2/Makefile
config.status: creating src/ci/Makefile
config.status: creating src/ci/ciutil/Makefile
config.status: creating src/ci/fci/Makefile
config.status: creating src/ci/zfci/Makefile
config.status: creating src/ci/ras/Makefile
config.status: creating src/response/Makefile
config.status: creating src/multi/Makefile
config.status: creating src/multi/casscf/Makefile
config.status: creating src/multi/zcasscf/Makefile
config.status: creating src/mat1e/Makefile
config.status: creating src/periodic/Makefile
config.status: creating src/opt/Makefile
config.status: creating src/basis/Makefile
config.status: creating bagel_config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a -O--parallel
make -j4 -Oline
make all-recursive
Making all in src
Making all in util
Making all in parallel
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c -o mpi_interface.lo mpi_interface.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c mpi_interface.cc -o mpi_interface.o
mpi_interface.cc: In member function 'void bagel::MPI_Interface::broadcast(size_t*, size_t, int) const':
mpi_interface.cc:148:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
mpi_interface.cc: In member function 'void bagel::MPI_Interface::allgather(const size_t*, size_t, size_t*, size_t) const':
mpi_interface.cc:201:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
mpi_interface.cc: In member function 'int bagel::MPI_Interface::request_send(const size_t*, size_t, int, int)':
mpi_interface.cc:267:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
Makefile:445: recipe for target 'mpi_interface.lo' failed
make[5]: *** [mpi_interface.lo] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
make[5]: *** Waiting for unfinished jobs....
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c -o process.lo process.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c process.cc -o process.o
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c -o resources.lo resources.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c resources.cc -o resources.o
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c -o rmawindow.lo rmawindow.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c rmawindow.cc -o rmawindow.o
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
Makefile:500: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
Makefile:584: recipe for target 'all-recursive' failed
make[3]: *** [all-recursive] Error 1
Makefile:416: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
Makefile:348: recipe for target 'all' failed
make[1]: *** [all] Error 2
dh_auto_build: make -j4 -Oline returned exit code 2
debian/rules:9: recipe for target 'build-arch' failed
make: *** [build-arch] Error 25
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2018-05-13T08:49:37Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 0
Build-Time: 162
Distribution: buster-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 719
Job: bagel_1.1.1-2
Machine Architecture: armhf
Package: bagel
Package-Time: 970
Source-Version: 1.1.1-2
Space: 0
Status: failed
Version: 1.1.1-2
--------------------------------------------------------------------------------
Finished at 2018-05-13T08:49:37Z
Build needed 00:00:00, 0k disc space