bagel →
0.0~git20170109-1 →
armhf → 2023-03-28 09:56:36
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04
+==============================================================================+
| bagel 0.0~git20170109-1 (armhf) Tue, 28 Mar 2023 09:39:07 +0000 |
+==============================================================================+
Package: bagel
Version: 0.0~git20170109-1
Source Version: 0.0~git20170109-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-b560710c-6c3c-44fa-a42d-e3182848d2b4' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private stretch-staging/main Sources [9731 kB]
Get:3 http://172.17.4.1/private stretch-staging/main armhf Packages [11.7 MB]
Fetched 21.4 MB in 23s (898 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'bagel' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debichem/unstable/bagel/
Need to get 32.6 MB of source archives.
Get:1 http://172.17.4.1/private stretch-staging/main bagel 0.0~git20170109-1 (dsc) [2189 B]
Get:2 http://172.17.4.1/private stretch-staging/main bagel 0.0~git20170109-1 (tar) [32.6 MB]
Get:3 http://172.17.4.1/private stretch-staging/main bagel 0.0~git20170109-1 (diff) [6080 B]
Fetched 32.6 MB in 3s (10.2 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/bagel-xXVlGU/bagel-0.0~git20170109' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/bagel-xXVlGU' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-TD6tfr/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-TD6tfr/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-TD6tfr/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Packages [431 B]
Fetched 2107 B in 0s (2907 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 34 not upgraded.
Need to get 774 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [774 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 774 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12714 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
dpkg-deb: building package 'sbuild-build-depends-bagel-dummy' in '/<<BUILDDIR>>/resolver-TD6tfr/apt_archive/sbuild-build-depends-bagel-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-bagel-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Sources [551 B]
Get:5 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ Packages [635 B]
Fetched 2519 B in 0s (3630 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install bagel build dependencies (apt-based resolver)
-----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base
gfortran gfortran-6 groff-base icu-devtools intltool-debian
libarchive-zip-perl libblas-common libblas-dev libblas3
libboost-chrono1.62.0 libboost-python-dev libboost-python1.62-dev
libboost-python1.62.0 libboost-regex-dev libboost-regex1.62-dev
libboost-regex1.62.0 libboost-serialization-dev
libboost-serialization1.62-dev libboost-serialization1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libcroco3
libexpat1 libexpat1-dev libffi6 libfile-stripnondeterminism-perl
libgfortran-6-dev libgfortran3 libglib2.0-0 libicu-dev libicu57
liblapack-dev liblapack3 libmagic-mgc libmagic1 libmpdec2 libmpich-dev
libmpich12 libpipeline1 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal
libpython3.5-stdlib libsigsegv2 libssl1.1 libtimedate-perl libtool
libunistring0 libxc-dev libxc4 libxml2 m4 man-db mime-support po-debconf
python python-dev python-minimal python2.7 python2.7-dev python2.7-minimal
python3 python3-dev python3-minimal python3.5 python3.5-dev
python3.5-minimal
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc
gfortran-6-doc libgfortran3-dbg libcoarrays-dev groff liblapack-doc-man
liblapack-doc libboost1.62-doc gccxml libboost-atomic1.62-dev
libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-filesystem1.62-dev libboost-graph1.62-dev
libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev
libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev
libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-random1.62-dev
libboost-signals1.62-dev libboost-system1.62-dev libboost-thread1.62-dev
libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev
libboost1.62-tools-dev libmpfrc++-dev libntl-dev icu-doc libtool-doc gcj-jdk
m4-doc less www-browser libmail-box-perl python-doc python-tk python2.7-doc
binfmt-support python3-doc python3-tk python3-venv python3.5-venv
python3.5-doc
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs mpich
libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base
gfortran gfortran-6 groff-base icu-devtools intltool-debian
libarchive-zip-perl libblas-common libblas-dev libblas3
libboost-chrono1.62.0 libboost-python-dev libboost-python1.62-dev
libboost-python1.62.0 libboost-regex-dev libboost-regex1.62-dev
libboost-regex1.62.0 libboost-serialization-dev
libboost-serialization1.62-dev libboost-serialization1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libcroco3
libexpat1 libexpat1-dev libffi6 libfile-stripnondeterminism-perl
libgfortran-6-dev libgfortran3 libglib2.0-0 libicu-dev libicu57
liblapack-dev liblapack3 libmagic-mgc libmagic1 libmpdec2 libmpich-dev
libmpich12 libpipeline1 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal
libpython3.5-stdlib libsigsegv2 libssl1.1 libtimedate-perl libtool
libunistring0 libxc-dev libxc4 libxml2 m4 man-db mime-support po-debconf
python python-dev python-minimal python2.7 python2.7-dev python2.7-minimal
python3 python3-dev python3-minimal python3.5 python3.5-dev
python3.5-minimal sbuild-build-depends-bagel-dummy
0 upgraded, 93 newly installed, 0 to remove and 34 not upgraded.
Need to get 132 MB of archives.
After this operation, 447 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-TD6tfr/apt_archive ./ sbuild-build-depends-bagel-dummy 0.invalid.0 [836 B]
Get:2 http://172.17.4.1/private stretch-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.4.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1+deb9u1 [88.2 kB]
Get:4 http://172.17.4.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.12+nmu1 [178 kB]
Get:5 http://172.17.4.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.4.1/private stretch-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.4.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.13-2+deb9u6 [390 kB]
Get:8 http://172.17.4.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.13-2+deb9u6 [1181 kB]
Get:9 http://172.17.4.1/private stretch-staging/main armhf python-minimal armhf 2.7.13-2 [40.5 kB]
Get:10 http://172.17.4.1/private stretch-staging/main armhf mime-support all 3.60 [36.7 kB]
Get:11 http://172.17.4.1/private stretch-staging/main armhf libexpat1 armhf 2.2.0-2+deb9u5 [63.8 kB]
Get:12 http://172.17.4.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-6 [18.7 kB]
Get:13 http://172.17.4.1/private stretch-staging/main armhf libssl1.1 armhf 1.1.0l-1~deb9u6 [1120 kB]
Get:14 http://172.17.4.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.13-2+deb9u6 [1828 kB]
Get:15 http://172.17.4.1/private stretch-staging/main armhf python2.7 armhf 2.7.13-2+deb9u6 [286 kB]
Get:16 http://172.17.4.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.13-2 [20.0 kB]
Get:17 http://172.17.4.1/private stretch-staging/main armhf python armhf 2.7.13-2 [154 kB]
Get:18 http://172.17.4.1/private stretch-staging/main armhf libpython3.5-minimal armhf 3.5.3-1+deb9u5 [568 kB]
Get:19 http://172.17.4.1/private stretch-staging/main armhf python3.5-minimal armhf 3.5.3-1+deb9u5 [1441 kB]
Get:20 http://172.17.4.1/private stretch-staging/main armhf python3-minimal armhf 3.5.3-1 [35.3 kB]
Get:21 http://172.17.4.1/private stretch-staging/main armhf libmpdec2 armhf 2.4.2-1 [67.5 kB]
Get:22 http://172.17.4.1/private stretch-staging/main armhf libpython3.5-stdlib armhf 3.5.3-1+deb9u5 [2089 kB]
Get:23 http://172.17.4.1/private stretch-staging/main armhf python3.5 armhf 3.5.3-1+deb9u5 [231 kB]
Get:24 http://172.17.4.1/private stretch-staging/main armhf libpython3-stdlib armhf 3.5.3-1 [18.6 kB]
Get:25 http://172.17.4.1/private stretch-staging/main armhf dh-python all 2.20170125 [86.8 kB]
Get:26 http://172.17.4.1/private stretch-staging/main armhf python3 armhf 3.5.3-1 [21.6 kB]
Get:27 http://172.17.4.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.30-1+deb9u3 [222 kB]
Get:28 http://172.17.4.1/private stretch-staging/main armhf libmagic1 armhf 1:5.30-1+deb9u3 [105 kB]
Get:29 http://172.17.4.1/private stretch-staging/main armhf file armhf 1:5.30-1+deb9u3 [63.7 kB]
Get:30 http://172.17.4.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-2+deb9u1 [117 kB]
Get:31 http://172.17.4.1/private stretch-staging/main armhf libicu57 armhf 57.1-6+deb9u5 [7427 kB]
Get:32 http://172.17.4.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2.2+deb9u7 [805 kB]
Get:33 http://172.17.4.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:34 http://172.17.4.1/private stretch-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:35 http://172.17.4.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:36 http://172.17.4.1/private stretch-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:37 http://172.17.4.1/private stretch-staging/main armhf automake all 1:1.15-6 [733 kB]
Get:38 http://172.17.4.1/private stretch-staging/main armhf autopoint all 0.19.8.1-2+deb9u1 [433 kB]
Get:39 http://172.17.4.1/private stretch-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:40 http://172.17.4.1/private stretch-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:41 http://172.17.4.1/private stretch-staging/main armhf libarchive-zip-perl all 1.59-1+deb9u1 [96.2 kB]
Get:42 http://172.17.4.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.034-1 [16.4 kB]
Get:43 http://172.17.4.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2+deb9u1 [37.9 kB]
Get:44 http://172.17.4.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.034-1 [10.5 kB]
Get:45 http://172.17.4.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.50.3-2+deb9u3 [2529 kB]
Get:46 http://172.17.4.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-3 [131 kB]
Get:47 http://172.17.4.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:48 http://172.17.4.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-2+deb9u1 [1418 kB]
Get:49 http://172.17.4.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:50 http://172.17.4.1/private stretch-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:51 http://172.17.4.1/private stretch-staging/main armhf debhelper all 10.2.5 [961 kB]
Get:52 http://172.17.4.1/private stretch-staging/main armhf libgfortran3 armhf 6.3.0-18+rpi1+deb9u1 [166 kB]
Get:53 http://172.17.4.1/private stretch-staging/main armhf libgfortran-6-dev armhf 6.3.0-18+rpi1+deb9u1 [199 kB]
Get:54 http://172.17.4.1/private stretch-staging/main armhf gfortran-6 armhf 6.3.0-18+rpi1+deb9u1 [5421 kB]
Get:55 http://172.17.4.1/private stretch-staging/main armhf gfortran armhf 4:6.3.0-4 [1352 B]
Get:56 http://172.17.4.1/private stretch-staging/main armhf icu-devtools armhf 57.1-6+deb9u5 [157 kB]
Get:57 http://172.17.4.1/private stretch-staging/main armhf libblas-common armhf 3.7.0-2 [14.2 kB]
Get:58 http://172.17.4.1/private stretch-staging/main armhf libblas3 armhf 3.7.0-2 [107 kB]
Get:59 http://172.17.4.1/private stretch-staging/main armhf libblas-dev armhf 3.7.0-2 [114 kB]
Get:60 http://172.17.4.1/private stretch-staging/main armhf libboost-system1.62.0 armhf 1.62.0+dfsg-4 [32.1 kB]
Get:61 http://172.17.4.1/private stretch-staging/main armhf libboost-chrono1.62.0 armhf 1.62.0+dfsg-4 [35.7 kB]
Get:62 http://172.17.4.1/private stretch-staging/main armhf libboost1.62-dev armhf 1.62.0+dfsg-4 [7009 kB]
Get:63 http://172.17.4.1/private stretch-staging/main armhf libboost-python1.62.0 armhf 1.62.0+dfsg-4 [120 kB]
Get:64 http://172.17.4.1/private stretch-staging/main armhf libpython2.7 armhf 2.7.13-2+deb9u6 [914 kB]
Get:65 http://172.17.4.1/private stretch-staging/main armhf libexpat1-dev armhf 2.2.0-2+deb9u5 [118 kB]
Get:66 http://172.17.4.1/private stretch-staging/main armhf libpython2.7-dev armhf 2.7.13-2+deb9u6 [27.6 MB]
Get:67 http://172.17.4.1/private stretch-staging/main armhf libpython-dev armhf 2.7.13-2 [20.0 kB]
Get:68 http://172.17.4.1/private stretch-staging/main armhf python2.7-dev armhf 2.7.13-2+deb9u6 [288 kB]
Get:69 http://172.17.4.1/private stretch-staging/main armhf python-dev armhf 2.7.13-2 [1130 B]
Get:70 http://172.17.4.1/private stretch-staging/main armhf libpython3.5 armhf 3.5.3-1+deb9u5 [1171 kB]
Get:71 http://172.17.4.1/private stretch-staging/main armhf libpython3.5-dev armhf 3.5.3-1+deb9u5 [36.9 MB]
Get:72 http://172.17.4.1/private stretch-staging/main armhf libpython3-dev armhf 3.5.3-1 [18.7 kB]
Get:73 http://172.17.4.1/private stretch-staging/main armhf python3.5-dev armhf 3.5.3-1+deb9u5 [413 kB]
Get:74 http://172.17.4.1/private stretch-staging/main armhf python3-dev armhf 3.5.3-1 [1158 B]
Get:75 http://172.17.4.1/private stretch-staging/main armhf libboost-python1.62-dev armhf 1.62.0+dfsg-4 [156 kB]
Get:76 http://172.17.4.1/private stretch-staging/main armhf libboost-python-dev armhf 1.62.0.1+b4 [4086 B]
Get:77 http://172.17.4.1/private stretch-staging/main armhf libboost-regex1.62.0 armhf 1.62.0+dfsg-4 [232 kB]
Get:78 http://172.17.4.1/private stretch-staging/main armhf libicu-dev armhf 57.1-6+deb9u5 [15.8 MB]
Get:79 http://172.17.4.1/private stretch-staging/main armhf libboost-regex1.62-dev armhf 1.62.0+dfsg-4 [325 kB]
Get:80 http://172.17.4.1/private stretch-staging/main armhf libboost-regex-dev armhf 1.62.0.1+b4 [3962 B]
Get:81 http://172.17.4.1/private stretch-staging/main armhf libboost-serialization1.62.0 armhf 1.62.0+dfsg-4 [105 kB]
Get:82 http://172.17.4.1/private stretch-staging/main armhf libboost-serialization1.62-dev armhf 1.62.0+dfsg-4 [170 kB]
Get:83 http://172.17.4.1/private stretch-staging/main armhf libboost-serialization-dev armhf 1.62.0.1+b4 [3928 B]
Get:84 http://172.17.4.1/private stretch-staging/main armhf libboost-timer1.62.0 armhf 1.62.0+dfsg-4 [34.2 kB]
Get:85 http://172.17.4.1/private stretch-staging/main armhf libboost-test1.62.0 armhf 1.62.0+dfsg-4 [223 kB]
Get:86 http://172.17.4.1/private stretch-staging/main armhf libboost-test1.62-dev armhf 1.62.0+dfsg-4 [287 kB]
Get:87 http://172.17.4.1/private stretch-staging/main armhf libboost-test-dev armhf 1.62.0.1+b4 [3734 B]
Get:88 http://172.17.4.1/private stretch-staging/main armhf liblapack3 armhf 3.7.0-2 [1509 kB]
Get:89 http://172.17.4.1/private stretch-staging/main armhf liblapack-dev armhf 3.7.0-2 [1483 kB]
Get:90 http://172.17.4.1/private stretch-staging/main armhf libxc4 armhf 3.0.0-1 [328 kB]
Get:91 http://172.17.4.1/private stretch-staging/main armhf libxc-dev armhf 3.0.0-1 [378 kB]
Get:92 http://172.17.4.1/private stretch-staging/main armhf libmpich12 armhf 3.2-7+rpi1 [785 kB]
Get:93 http://172.17.4.1/private stretch-staging/main armhf libmpich-dev armhf 3.2-7+rpi1 [1038 kB]
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Setting up libxc-dev (3.0.0-1) ...
Setting up liblapack3 (3.7.0-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up libglib2.0-0:armhf (2.50.3-2+deb9u3) ...
No schema files found: doing nothing.
Setting up libpython3.5-stdlib:armhf (3.5.3-1+deb9u5) ...
Setting up libboost-regex1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up python2.7 (2.7.13-2+deb9u6) ...
Setting up autoconf (2.69-10) ...
Setting up libicu-dev (57.1-6+deb9u5) ...
Setting up file (1:5.30-1+deb9u3) ...
Setting up libcroco3:armhf (0.6.11-3) ...
Setting up libpython-stdlib:armhf (2.7.13-2) ...
Setting up libpython2.7:armhf (2.7.13-2+deb9u6) ...
Setting up automake (1:1.15-6) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpython2.7-dev:armhf (2.7.13-2+deb9u6) ...
Setting up python2.7-dev (2.7.13-2+deb9u6) ...
Setting up python (2.7.13-2) ...
Setting up libboost-chrono1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up libtool (2.4.6-2) ...
Setting up python3.5 (3.5.3-1+deb9u5) ...
Setting up gfortran (4:6.3.0-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libpython3-stdlib:armhf (3.5.3-1) ...
Setting up libpython-dev:armhf (2.7.13-2) ...
Setting up libboost-timer1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up gettext (0.19.8.1-2+deb9u1) ...
Setting up libblas-dev (3.7.0-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libboost-regex1.62-dev:armhf (1.62.0+dfsg-4) ...
Setting up libpython3.5:armhf (3.5.3-1+deb9u5) ...
Setting up python-dev (2.7.13-2) ...
Setting up libpython3.5-dev:armhf (3.5.3-1+deb9u5) ...
Setting up libmpich-dev (3.2-7+rpi1) ...
update-alternatives: using /usr/include/mpich to provide /usr/include/mpi (mpi) in auto mode
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libboost-test1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up libboost-regex-dev:armhf (1.62.0.1+b4) ...
Setting up python3.5-dev (3.5.3-1+deb9u5) ...
Setting up libpython3-dev:armhf (3.5.3-1) ...
Setting up liblapack-dev (3.7.0-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up po-debconf (1.0.20) ...
Setting up libboost-test1.62-dev:armhf (1.62.0+dfsg-4) ...
Setting up libboost-test-dev:armhf (1.62.0.1+b4) ...
Setting up dh-autoreconf (14) ...
Setting up python3 (3.5.3-1) ...
Setting up python3-dev (3.5.3-1) ...
Setting up dh-strip-nondeterminism (0.034-1) ...
Setting up dh-python (2.20170125) ...
Setting up debhelper (10.2.5) ...
Setting up libboost-python1.62-dev (1.62.0+dfsg-4) ...
Setting up libboost-python-dev (1.62.0.1+b4) ...
Setting up sbuild-build-depends-bagel-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-11+deb9u4) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.28-5 dpkg-dev_1.18.25 g++-6_6.3.0-18+rpi1+deb9u1 gcc-6_6.3.0-18+rpi1+deb9u1 libc6-dev_2.24-11+deb9u4 libstdc++-6-dev_6.3.0-18+rpi1+deb9u1 libstdc++6_6.3.0-18+rpi1+deb9u1 linux-libc-dev_4.9.82-1+deb9u3+rpi1
Package versions: adduser_3.115 apt_1.4.9 autoconf_2.69-10 automake_1:1.15-6 autopoint_0.19.8.1-2+deb9u1 autotools-dev_20161112.1 base-files_9.9+rpi1+deb9u11 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-5 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1+deb9u1 build-essential_12.3 bzip2_1.0.6-8.1 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:6.3.0-4 cpp-6_6.3.0-18+rpi1+deb9u1 dash_0.5.8-2.4 debconf_1.5.61 debhelper_10.2.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-python_2.20170125 dh-strip-nondeterminism_0.034-1 diffutils_1:3.5-3 dmsetup_2:1.02.137-2 dpkg_1.18.25 dpkg-dev_1.18.25 e2fslibs_1.43.4-2+deb9u1 e2fsprogs_1.43.4-2+deb9u1 fakeroot_1.21-3.1 file_1:5.30-1+deb9u3 findutils_4.6.0+git+20161106-2 g++_4:6.3.0-4 g++-6_6.3.0-18+rpi1+deb9u1 gcc_4:6.3.0-4 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-6_6.3.0-18+rpi1+deb9u1 gcc-6-base_6.3.0-18+rpi1+deb9u1 gettext_0.19.8.1-2+deb9u1 gettext-base_0.19.8.1-2+deb9u1 gfortran_4:6.3.0-4 gfortran-6_6.3.0-18+rpi1+deb9u1 gnupg_2.1.18-8~deb9u4 gnupg-agent_2.1.18-8~deb9u4 gpgv_2.1.18-8~deb9u4 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 icu-devtools_57.1-6+deb9u5 init-system-helpers_1.48 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_23-2 libacl1_2.2.52-3 libapparmor1_2.11.0-3+deb9u2 libapt-pkg5.0_1.4.9 libarchive-zip-perl_1.59-1+deb9u1 libasan3_6.3.0-18+rpi1+deb9u1 libassuan0_2.4.3-2 libatomic1_6.3.0-18+rpi1+deb9u1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-2 libaudit1_1:2.6.7-2 libblas-common_3.7.0-2 libblas-dev_3.7.0-2 libblas3_3.7.0-2 libblkid1_2.29.2-1+deb9u1 libboost-chrono1.62.0_1.62.0+dfsg-4 libboost-python-dev_1.62.0.1+b4 libboost-python1.62-dev_1.62.0+dfsg-4 libboost-python1.62.0_1.62.0+dfsg-4 libboost-regex-dev_1.62.0.1+b4 libboost-regex1.62-dev_1.62.0+dfsg-4 libboost-regex1.62.0_1.62.0+dfsg-4 libboost-serialization-dev_1.62.0.1+b4 libboost-serialization1.62-dev_1.62.0+dfsg-4 libboost-serialization1.62.0_1.62.0+dfsg-4 libboost-system1.62.0_1.62.0+dfsg-4 libboost-test-dev_1.62.0.1+b4 libboost-test1.62-dev_1.62.0+dfsg-4 libboost-test1.62.0_1.62.0+dfsg-4 libboost-timer1.62.0_1.62.0+dfsg-4 libboost1.62-dev_1.62.0+dfsg-4 libbsd0_0.8.3-1+deb9u1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-11+deb9u4 libc-dev-bin_2.24-11+deb9u4 libc6_2.24-11+deb9u4 libc6-dev_2.24-11+deb9u4 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_6.3.0-18+rpi1+deb9u1 libcomerr2_1.43.4-2+deb9u1 libcroco3_0.6.11-3 libcryptsetup4_2:1.7.3-4 libdb5.3_5.3.28-12+deb9u1 libdbus-1-3_1.10.28-0+deb9u1 libdebconfclient0_0.227 libdevmapper1.02.1_2:1.02.137-2 libdpkg-perl_1.18.25 libdrm2_2.4.74-1 libexpat1_2.2.0-2+deb9u5 libexpat1-dev_2.2.0-2+deb9u5 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1+deb9u1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.034-1 libgcc-6-dev_6.3.0-18+rpi1+deb9u1 libgcc1_1:6.3.0-18+rpi1+deb9u1 libgcrypt20_1.7.6-2+deb9u3 libgdbm3_1.8.3-14 libgfortran-6-dev_6.3.0-18+rpi1+deb9u1 libgfortran3_6.3.0-18+rpi1+deb9u1 libglib2.0-0_2.50.3-2+deb9u3 libgmp10_2:6.1.2+dfsg-1 libgomp1_6.3.0-18+rpi1+deb9u1 libgpg-error0_1.26-2 libicu-dev_57.1-6+deb9u5 libicu57_57.1-6+deb9u5 libidn11_1.33-1 libip4tc0_1.6.0+snapshot20161117-6 libisl15_0.18-1 libklibc_2.0.4-9+rpi1 libkmod2_23-2 libksba8_1.3.5-2 liblapack-dev_3.7.0-2 liblapack3_3.7.0-2 liblocale-gettext-perl_1.07-3+b1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.30-1+deb9u3 libmagic1_1:5.30-1+deb9u3 libmount1_2.29.2-1+deb9u1 libmpc3_1.0.3-1 libmpdec2_2.4.2-1 libmpfr4_3.1.5-1 libmpich-dev_3.2-7+rpi1 libmpich12_3.2-7+rpi1 libncurses5_6.0+20161126-1+deb9u2 libncursesw5_6.0+20161126-1+deb9u2 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.3-1 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-3 libperl5.24_5.24.1-3+deb9u5 libpipeline1_1.4.1-2 libplymouth4_0.9.2-4 libpng16-16_1.6.28-1+deb9u1 libprocps6_2:3.3.12-3+deb9u1 libpython-dev_2.7.13-2 libpython-stdlib_2.7.13-2 libpython2.7_2.7.13-2+deb9u6 libpython2.7-dev_2.7.13-2+deb9u6 libpython2.7-minimal_2.7.13-2+deb9u6 libpython2.7-stdlib_2.7.13-2+deb9u6 libpython3-dev_3.5.3-1 libpython3-stdlib_3.5.3-1 libpython3.5_3.5.3-1+deb9u5 libpython3.5-dev_3.5.3-1+deb9u5 libpython3.5-minimal_3.5.3-1+deb9u5 libpython3.5-stdlib_3.5.3-1+deb9u5 libreadline7_7.0-3 libseccomp2_2.3.1-2.1+deb9u1 libselinux1_2.6-3 libsemanage-common_2.6-2 libsemanage1_2.6-2 libsepol1_2.6-2 libsigsegv2_2.10-5 libsmartcols1_2.29.2-1+deb9u1 libsqlite3-0_3.16.2-5+deb9u1 libss2_1.43.4-2+deb9u1 libssl1.1_1.1.0l-1~deb9u6 libstdc++-6-dev_6.3.0-18+rpi1+deb9u1 libstdc++6_6.3.0-18+rpi1+deb9u1 libsystemd0_232-25+deb9u12 libtext-charwidth-perl_0.04-7+b7 libtext-iconv-perl_1.7-5+b8 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2+deb9u1 libtinfo5_6.0+20161126-1+deb9u2 libtool_2.4.6-2 libubsan0_6.3.0-18+rpi1+deb9u1 libudev1_232-25+deb9u12 libunistring0_0.9.6+really0.9.3-0.1 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1+deb9u1 libxc-dev_3.0.0-1 libxc4_3.0.0-1 libxml2_2.9.4+dfsg1-2.2+deb9u7 linux-base_4.5 linux-libc-dev_4.9.82-1+deb9u3+rpi1 login_1:4.4-4.1 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mime-support_3.60 mount_2.29.2-1+deb9u1 mountall_2.54 multiarch-support_2.24-11+deb9u4 ncurses-base_6.0+20161126-1+deb9u2 ncurses-bin_6.0+20161126-1+deb9u2 passwd_1:4.4-4.1 patch_2.7.5-1+deb9u2 perl_5.24.1-3+deb9u5 perl-base_5.24.1-3+deb9u5 perl-modules-5.24_5.24.1-3+deb9u5 pinentry-curses_1.0.0-2 plymouth_0.9.2-4 po-debconf_1.0.20 procps_2:3.3.12-3+deb9u1 python_2.7.13-2 python-dev_2.7.13-2 python-minimal_2.7.13-2 python2.7_2.7.13-2+deb9u6 python2.7-dev_2.7.13-2+deb9u6 python2.7-minimal_2.7.13-2+deb9u6 python3_3.5.3-1 python3-dev_3.5.3-1 python3-minimal_3.5.3-1 python3.5_3.5.3-1+deb9u5 python3.5-dev_3.5.3-1+deb9u5 python3.5-minimal_3.5.3-1+deb9u5 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-bagel-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9+deb9u1 systemd_232-25+deb9u12 sysvinit-utils_2.88dsf-59.9 tar_1.29b-1.1 tzdata_2019c-0+deb9u1 udev_232-25+deb9u12 util-linux_2.29.2-1+deb9u1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Jan 17 20:30:04 2017 UTC
gpgv: using RSA key DC686A27B43481B0
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./bagel_0.0~git20170109-1.dsc
dpkg-source: info: extracting bagel in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking bagel_0.0~git20170109.orig.tar.gz
dpkg-source: info: unpacking bagel_0.0~git20170109-1.debian.tar.xz
dpkg-source: info: applying fix_linking_error.patch
dpkg-source: info: applying skip_failing_testcases.patch
dpkg-source: info: applying add_missing_includes.patch
dpkg-source: info: applying install_all_basis_sets.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-b560710c-6c3c-44fa-a42d-e3182848d2b4
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package bagel
dpkg-buildpackage: info: source version 0.0~git20170109-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build bagel-0.0~git20170109
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with autoreconf
dh_testdir
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
rm -rf /<<PKGBUILDDIR>>/src/testsuite
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean
dh_clean
debian/rules build-arch
dh build-arch --with autoreconf
dh_testdir -a
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:17: installing './compile'
configure.ac:39: installing './config.guess'
configure.ac:39: installing './config.sub'
configure.ac:6: installing './install-sh'
configure.ac:6: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
--datadir=/usr/share/bagel \
--libdir=/usr/lib/bagel \
--enable-static \
--disable-shared \
--with-boost \
--with-libxc=yes \
--with-mpi=openmpi \
--disable-scalapack \
--enable-smith
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for python... /usr/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/dist-packages
checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
..openmpi requested..
checking for mpicc... mpicc
checking for mpicxx... mpicxx
checking whether we are using the GNU C compiler... (cached) yes
checking whether mpicc accepts -g... (cached) yes
checking for mpicc option to accept ISO C89... (cached) none needed
checking whether mpicc understands -c and -o together... (cached) yes
checking dependency style of mpicc... (cached) none
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether mpicxx accepts -g... (cached) yes
checking dependency style of mpicxx... (cached) none
checking whether mpicxx supports C++11 features by default... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... mpicxx -E
checking for ld used by mpicxx... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking for mpicxx option to produce PIC... -fPIC -DPIC
checking if mpicxx PIC flag -fPIC -DPIC works... yes
checking if mpicxx static flag -static works... no
checking if mpicxx supports -c -o file.o... yes
checking if mpicxx supports -c -o file.o... (cached) yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for boostlib >= 1.53... yes
checking for main in -lboost_serialization-gcc-mt... no
checking for main in -lboost_serialization-mt... no
checking for main in -lboost_serialization... yes
checking if boost::serialization works... yes
checking for main in -lboost_regex-gcc-mt... no
checking for main in -lboost_regex-mt... no
checking for main in -lboost_regex... yes
checking for main in -lboost_unit_test_framework-gcc-mt... no
checking for main in -lboost_unit_test_framework-mt... no
checking for main in -lboost_unit_test_framework... yes
checking xc.h usability... yes
checking xc.h presence... yes
checking for xc.h... yes
checking for main in -lxc... yes
checking for zgemm3m_... no
checking mpi.h usability... yes
checking mpi.h presence... yes
checking for mpi.h... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/util/Makefile
config.status: creating src/util/input/Makefile
config.status: creating src/util/io/Makefile
config.status: creating src/util/parallel/Makefile
config.status: creating src/util/math/Makefile
config.status: creating src/asd/multisite/Makefile
config.status: creating src/asd/dimer/Makefile
config.status: creating src/asd/dmrg/Makefile
config.status: creating src/asd/orbital/Makefile
config.status: creating src/asd/Makefile
config.status: creating src/wfn/Makefile
config.status: creating src/grad/Makefile
config.status: creating src/integral/Makefile
config.status: creating src/scf/Makefile
config.status: creating src/df/Makefile
config.status: creating src/prop/Makefile
config.status: creating src/smith/Makefile
config.status: creating src/molecule/Makefile
config.status: creating src/pt2/Makefile
config.status: creating src/ci/Makefile
config.status: creating src/ci/ciutil/Makefile
config.status: creating src/ci/fci/Makefile
config.status: creating src/ci/zfci/Makefile
config.status: creating src/ci/ras/Makefile
config.status: creating src/multi/Makefile
config.status: creating src/multi/casscf/Makefile
config.status: creating src/multi/zcasscf/Makefile
config.status: creating src/mat1e/Makefile
config.status: creating src/periodic/Makefile
config.status: creating src/opt/Makefile
config.status: creating src/alglib/Makefile
config.status: creating src/basis/Makefile
config.status: creating bagel_config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a
make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Making all in src
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Making all in util
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/util'
Making all in parallel
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c -o process.lo process.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c process.cc -o process.o
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c -o mpi_interface.lo mpi_interface.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -DZDOT_RETURN -c mpi_interface.cc -o mpi_interface.o
mpi_interface.cc: In member function 'int bagel::MPI_Interface::iallreduce(size_t*, size_t)':
mpi_interface.cc:182:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
mpi_interface.cc: In member function 'void bagel::MPI_Interface::broadcast(size_t*, size_t, int) const':
mpi_interface.cc:222:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
mpi_interface.cc: In member function 'void bagel::MPI_Interface::allgather(const size_t*, size_t, size_t*, size_t) const':
mpi_interface.cc:291:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
mpi_interface.cc: In member function 'int bagel::MPI_Interface::request_send(const size_t*, size_t, int, int)':
mpi_interface.cc:357:3: error: static assertion failed: size_t is assumed to be the same size as unsigned long long
static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long");
^~~~~~~~~~~~~
Makefile:444: recipe for target 'mpi_interface.lo' failed
make[5]: *** [mpi_interface.lo] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
Makefile:500: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/util'
Makefile:584: recipe for target 'all-recursive' failed
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
Makefile:416: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
Makefile:348: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: make -j1 returned exit code 2
debian/rules:9: recipe for target 'build-arch' failed
make: *** [build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
--------------------------------------------------------------------------------
Build finished at 2023-03-28T09:56:31Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 0
Build-Time: 159
Distribution: stretch-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 828
Job: bagel_0.0~git20170109-1
Machine Architecture: armhf
Package: bagel
Package-Time: 1044
Source-Version: 0.0~git20170109-1
Space: 0
Status: failed
Version: 0.0~git20170109-1
--------------------------------------------------------------------------------
Finished at 2023-03-28T09:56:31Z
Build needed 00:00:00, 0k disc space