bagel →
0.0~git20160507-3 →
armhf → 2016-08-17 04:09:13
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on testwandboard
+==============================================================================+
| bagel 0.0~git20160507-3 (armhf) 17 Aug 2016 03:55 |
+==============================================================================+
Package: bagel
Version: 0.0~git20160507-3
Source Version: 0.0~git20160507-3
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/bagel-0yjZLy/bagel-0.0~git20160507' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/bagel-0yjZLy' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-48db800c-de8e-4629-b742-61693d6a7a61' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9226 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.2 MB]
Fetched 20.4 MB in 26s (764 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'bagel' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debichem/unstable/bagel/
Need to get 23.2 MB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main bagel 0.0~git20160507-3 (dsc) [2191 B]
Get:2 http://172.17.0.1/private stretch-staging/main bagel 0.0~git20160507-3 (tar) [23.2 MB]
Get:3 http://172.17.0.1/private stretch-staging/main bagel 0.0~git20160507-3 (diff) [7272 B]
Fetched 23.2 MB in 10s (2132 kB/s)
Download complete and in download only mode
Check architectures
-------------------
Check dependencies
------------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-lfiUR0/apt_archive/sbuild-build-depends-core-dummy.deb'.
Warning: apt-key output should not be parsed (stdout is not a terminal)
OK
Get:1 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ Sources [194 B]
Get:5 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ Packages [507 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-lfiUR0/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...
+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded.
Need to get 0 B/768 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-lfiUR0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [768 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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(Reading database ... 13951 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev
dpkg-deb: building package 'sbuild-build-depends-bagel-dummy' in '/<<BUILDDIR>>/resolver-IjlGGk/apt_archive/sbuild-build-depends-bagel-dummy.deb'.
Warning: apt-key output should not be parsed (stdout is not a terminal)
OK
Get:1 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ Sources [254 B]
Get:5 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ Packages [575 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-IjlGGk/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...
+------------------------------------------------------------------------------+
| Install bagel build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gcc-5-base gettext
gettext-base gfortran gfortran-6 groff-base icu-devtools intltool-debian
libarchive-zip-perl libasan2 libblas-common libblas-dev libblas3
libboost-chrono1.61.0 libboost-python-dev libboost-python1.61-dev
libboost-python1.61.0 libboost-regex-dev libboost-regex1.61-dev
libboost-regex1.61.0 libboost-serialization-dev
libboost-serialization1.61-dev libboost-serialization1.61.0
libboost-system1.61.0 libboost-test-dev libboost-test1.61-dev
libboost-test1.61.0 libboost-timer1.61.0 libboost1.61-dev libbsd0 libcroco3
libexpat1 libexpat1-dev libffi6 libfile-stripnondeterminism-perl
libgcc-5-dev libgfortran-6-dev libgfortran3 libglib2.0-0 libicu-dev libicu57
liblapack-dev liblapack3 libmagic-mgc libmagic1 libmpdec2 libmpich-dev
libmpich12 libpipeline1 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal
libpython3.5-stdlib libsigsegv2 libsqlite3-0 libssl1.0.2 libstdc++-5-dev
libtimedate-perl libtool libunistring0 libxc-dev libxc4 libxml2 m4 man-db
mime-support po-debconf python python-dev python-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-dev python3-minimal
python3.5 python3.5-dev python3.5-minimal
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc
gfortran-6-doc libgfortran3-dbg libcoarrays-dev groff liblapack-doc-man
liblapack-doc libboost1.61-doc gccxml libboost-atomic1.61-dev
libboost-chrono1.61-dev libboost-context1.61-dev libboost-coroutine1.61-dev
libboost-date-time1.61-dev libboost-exception1.61-dev
libboost-filesystem1.61-dev libboost-graph1.61-dev
libboost-graph-parallel1.61-dev libboost-iostreams1.61-dev
libboost-locale1.61-dev libboost-log1.61-dev libboost-math1.61-dev
libboost-mpi1.61-dev libboost-mpi-python1.61-dev
libboost-program-options1.61-dev libboost-random1.61-dev
libboost-signals1.61-dev libboost-system1.61-dev libboost-thread1.61-dev
libboost-timer1.61-dev libboost-wave1.61-dev libboost1.61-tools-dev
libmpfrc++-dev libntl-dev icu-doc libstdc++-5-doc libtool-doc gcj-jdk less
www-browser libmail-box-perl python-doc python-tk python2.7-doc
binfmt-support python3-doc python3-tk python3-venv python3.5-venv
python3.5-doc
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs mpich
libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base
gfortran gfortran-6 groff-base icu-devtools intltool-debian
libarchive-zip-perl libasan2 libblas-common libblas-dev libblas3
libboost-chrono1.61.0 libboost-python-dev libboost-python1.61-dev
libboost-python1.61.0 libboost-regex-dev libboost-regex1.61-dev
libboost-regex1.61.0 libboost-serialization-dev
libboost-serialization1.61-dev libboost-serialization1.61.0
libboost-system1.61.0 libboost-test-dev libboost-test1.61-dev
libboost-test1.61.0 libboost-timer1.61.0 libboost1.61-dev libbsd0 libcroco3
libexpat1 libexpat1-dev libffi6 libfile-stripnondeterminism-perl
libgcc-5-dev libgfortran-6-dev libgfortran3 libglib2.0-0 libicu-dev libicu57
liblapack-dev liblapack3 libmagic-mgc libmagic1 libmpdec2 libmpich-dev
libmpich12 libpipeline1 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal
libpython3.5-stdlib libsigsegv2 libsqlite3-0 libssl1.0.2 libstdc++-5-dev
libtimedate-perl libtool libunistring0 libxc-dev libxc4 libxml2 m4 man-db
mime-support po-debconf python python-dev python-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-dev python3-minimal
python3.5 python3.5-dev python3.5-minimal sbuild-build-depends-bagel-dummy
The following packages will be upgraded:
gcc-5-base
1 upgraded, 97 newly installed, 0 to remove and 0 not upgraded.
Need to get 156 MB/156 MB of archives.
After this operation, 560 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-IjlGGk/apt_archive ./ sbuild-build-depends-bagel-dummy 0.invalid.0 [836 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-8 [1087 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.10 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.12-2 [388 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.12-2 [1173 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf python-minimal armhf 2.7.11-2 [40.3 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf mime-support all 3.60 [36.7 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.2.0-1 [61.7 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libsqlite3-0 armhf 3.13.0-1 [479 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2h-1 [889 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.12-2 [1843 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf python2.7 armhf 2.7.12-2 [277 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.11-2 [19.8 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf python armhf 2.7.11-2 [153 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libpython3.5-minimal armhf 3.5.2-3 [564 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf python3.5-minimal armhf 3.5.2-3 [1433 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf python3-minimal armhf 3.5.1-4 [35.3 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libmpdec2 armhf 2.4.2-1 [67.5 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libpython3.5-stdlib armhf 3.5.2-3 [2080 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf python3.5 armhf 3.5.2-3 [214 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libpython3-stdlib armhf 3.5.1-4 [18.6 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf dh-python all 2.20160721 [82.2 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf python3 armhf 3.5.1-4 [21.7 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf gcc-5-base armhf 5.4.1-1 [173 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.28-4 [210 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.28-4 [104 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.28-4 [62.7 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libpython2.7 armhf 2.7.12-2 [913 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libicu57 armhf 57.1-2 [7404 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-1+b1 [803 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20160430.1 [72.6 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.48.1-2 [2546 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.58-1 [95.5 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.022-1 [13.1 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.022-1 [7902 B]
Get:51 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160709 [799 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 6.1.1-11+rpi1 [166 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libgfortran-6-dev armhf 6.1.1-11+rpi1 [200 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf gfortran-6 armhf 6.1.1-11+rpi1 [27.9 MB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf gfortran armhf 4:6.1.1-1 [1370 B]
Get:58 http://172.17.0.1/private stretch-staging/main armhf icu-devtools armhf 57.1-2 [156 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf libasan2 armhf 5.4.1-1 [223 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf libblas-common armhf 3.6.1-2 [13.9 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf libblas3 armhf 3.6.1-2 [112 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf libblas-dev armhf 3.6.1-2 [18.9 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf libboost-system1.61.0 armhf 1.61.0+dfsg-2.1 [31.8 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf libboost-chrono1.61.0 armhf 1.61.0+dfsg-2.1 [35.5 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libgcc-5-dev armhf 5.4.1-1 [445 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf libstdc++-5-dev armhf 5.4.1-1 [1434 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf libboost1.61-dev armhf 1.61.0+dfsg-2.1 [6851 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf libboost-python1.61.0 armhf 1.61.0+dfsg-2.1 [118 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf libexpat1-dev armhf 2.2.0-1 [117 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-dev armhf 2.7.12-2 [27.5 MB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf libpython-dev armhf 2.7.11-2 [19.8 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf python2.7-dev armhf 2.7.12-2 [278 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf python-dev armhf 2.7.11-2 [1132 B]
Get:74 http://172.17.0.1/private stretch-staging/main armhf libpython3.5 armhf 3.5.2-3 [1169 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf libpython3.5-dev armhf 3.5.2-3 [36.8 MB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf libpython3-dev armhf 3.5.1-4 [18.7 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf python3.5-dev armhf 3.5.2-3 [413 kB]
Get:78 http://172.17.0.1/private stretch-staging/main armhf python3-dev armhf 3.5.1-4 [1164 B]
Get:79 http://172.17.0.1/private stretch-staging/main armhf libboost-python1.61-dev armhf 1.61.0+dfsg-2.1 [156 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf libboost-python-dev armhf 1.61.0.2 [3788 B]
Get:81 http://172.17.0.1/private stretch-staging/main armhf libboost-regex1.61.0 armhf 1.61.0+dfsg-2.1 [232 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf libicu-dev armhf 57.1-2 [15.5 MB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf libboost-regex1.61-dev armhf 1.61.0+dfsg-2.1 [324 kB]
Get:84 http://172.17.0.1/private stretch-staging/main armhf libboost-regex-dev armhf 1.61.0.2 [3664 B]
Get:85 http://172.17.0.1/private stretch-staging/main armhf libboost-serialization1.61.0 armhf 1.61.0+dfsg-2.1 [104 kB]
Get:86 http://172.17.0.1/private stretch-staging/main armhf libboost-serialization1.61-dev armhf 1.61.0+dfsg-2.1 [170 kB]
Get:87 http://172.17.0.1/private stretch-staging/main armhf libboost-serialization-dev armhf 1.61.0.2 [3622 B]
Get:88 http://172.17.0.1/private stretch-staging/main armhf libboost-timer1.61.0 armhf 1.61.0+dfsg-2.1 [34.0 kB]
Get:89 http://172.17.0.1/private stretch-staging/main armhf libboost-test1.61.0 armhf 1.61.0+dfsg-2.1 [199 kB]
Get:90 http://172.17.0.1/private stretch-staging/main armhf libboost-test1.61-dev armhf 1.61.0+dfsg-2.1 [259 kB]
Get:91 http://172.17.0.1/private stretch-staging/main armhf libboost-test-dev armhf 1.61.0.2 [3444 B]
Get:92 http://172.17.0.1/private stretch-staging/main armhf liblapack3 armhf 3.6.1-2 [1392 kB]
Get:93 http://172.17.0.1/private stretch-staging/main armhf liblapack-dev armhf 3.6.1-2 [1379 kB]
Get:94 http://172.17.0.1/private stretch-staging/main armhf libxc4 armhf 3.0.0-1 [328 kB]
Get:95 http://172.17.0.1/private stretch-staging/main armhf libxc-dev armhf 3.0.0-1 [378 kB]
Get:96 http://172.17.0.1/private stretch-staging/main armhf libmpich12 armhf 3.2-6 [785 kB]
Get:97 http://172.17.0.1/private stretch-staging/main armhf libmpich-dev armhf 3.2-6 [1036 kB]
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Setting up libboost-chrono1.61.0:armhf (1.61.0+dfsg-2.1) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up icu-devtools (57.1-2) ...
Setting up bsdmainutils (9.0.10) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libxc4:armhf (3.0.0-1) ...
Setting up libboost-serialization1.61.0:armhf (1.61.0+dfsg-2.1) ...
Setting up libpython2.7-stdlib:armhf (2.7.12-2) ...
Setting up autopoint (0.19.8.1-1) ...
Setting up libmpdec2:armhf (2.4.2-1) ...
Setting up gcc-5-base:armhf (5.4.1-1) ...
Setting up libfile-stripnondeterminism-perl (0.022-1) ...
Setting up gfortran-6 (6.1.1-11+rpi1) ...
Setting up libmpich12:armhf (3.2-6) ...
Setting up libboost-regex1.61.0:armhf (1.61.0+dfsg-2.1) ...
Setting up libboost-serialization1.61-dev:armhf (1.61.0+dfsg-2.1) ...
Setting up libxc-dev (3.0.0-1) ...
Setting up liblapack3 (3.6.1-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up libglib2.0-0:armhf (2.48.1-2) ...
No schema files found: doing nothing.
Setting up libpython3.5-stdlib:armhf (3.5.2-3) ...
Setting up libboost-timer1.61.0:armhf (1.61.0+dfsg-2.1) ...
Setting up python2.7 (2.7.12-2) ...
Setting up libasan2:armhf (5.4.1-1) ...
Setting up autoconf (2.69-10) ...
Setting up file (1:5.28-4) ...
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up libpython-stdlib:armhf (2.7.11-2) ...
Setting up libgcc-5-dev:armhf (5.4.1-1) ...
Setting up libpython2.7:armhf (2.7.12-2) ...
Setting up automake (1:1.15-4) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpython2.7-dev:armhf (2.7.12-2) ...
Setting up libboost-test1.61.0:armhf (1.61.0+dfsg-2.1) ...
Setting up python2.7-dev (2.7.12-2) ...
Setting up python (2.7.11-2) ...
Setting up libstdc++-5-dev:armhf (5.4.1-1) ...
Setting up libtool (2.4.6-0.1) ...
Setting up python3.5 (3.5.2-3) ...
Setting up gfortran (4:6.1.1-1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libpython3-stdlib:armhf (3.5.1-4) ...
Setting up libboost-serialization-dev:armhf (1.61.0.2) ...
Setting up libpython-dev:armhf (2.7.11-2) ...
Setting up gettext (0.19.8.1-1) ...
Setting up libblas-dev (3.6.1-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libboost-test1.61-dev:armhf (1.61.0+dfsg-2.1) ...
Setting up libpython3.5:armhf (3.5.2-3) ...
Setting up python-dev (2.7.11-2) ...
Setting up libicu-dev (57.1-2) ...
Setting up libpython3.5-dev:armhf (3.5.2-3) ...
Setting up libmpich-dev (3.2-6) ...
update-alternatives: using /usr/include/mpich to provide /usr/include/mpi (mpi) in auto mode
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libboost-regex1.61-dev:armhf (1.61.0+dfsg-2.1) ...
Setting up libboost-regex-dev:armhf (1.61.0.2) ...
Setting up libboost-test-dev:armhf (1.61.0.2) ...
Setting up python3.5-dev (3.5.2-3) ...
Setting up libpython3-dev:armhf (3.5.1-4) ...
Setting up liblapack-dev (3.6.1-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up po-debconf (1.0.19) ...
Setting up dh-autoreconf (12) ...
Setting up python3 (3.5.1-4) ...
Setting up python3-dev (3.5.1-4) ...
Setting up dh-python (2.20160721) ...
Setting up debhelper (9.20160709) ...
Setting up libboost-python1.61-dev (1.61.0+dfsg-2.1) ...
Setting up dh-strip-nondeterminism (0.022-1) ...
Setting up libboost-python-dev (1.61.0.2) ...
Setting up sbuild-build-depends-bagel-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.23-4) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.5.0-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26.1-1 dpkg-dev_1.18.10 g++-6_6.1.1-11+rpi1 gcc-6_6.1.1-11+rpi1 libc6-dev_2.23-4 libstdc++-5-dev_5.4.1-1 libstdc++-6-dev_6.1.1-11+rpi1 libstdc++6_6.1.1-11+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.3~pre3 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.8.1-1 autotools-dev_20160430.1 base-files_9.6+rpi1 base-passwd_3.5.39 bash_4.3-15 binutils_2.26.1-1 bsdmainutils_9.0.10 bsdutils_1:2.28-6 build-essential_12.2 bzip2_1.0.6-8 console-setup_1.147 console-setup-linux_1.147 coreutils_8.25-2 cpio_2.11+dfsg-5 cpp_4:6.1.1-1 cpp-6_6.1.1-11+rpi1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_9.20160709 debianutils_4.8 dh-autoreconf_12 dh-python_2.20160721 dh-strip-nondeterminism_0.022-1 diffutils_1:3.3-3 dmsetup_2:1.02.130-1 dpkg_1.18.10 dpkg-dev_1.18.10 e2fslibs_1.43.1-1 e2fsprogs_1.43.1-1 fakeroot_1.21-1 file_1:5.28-4 findutils_4.6.0+git+20160703-2 fuse2fs_1.43.1-1 g++_4:6.1.1-1 g++-6_6.1.1-11+rpi1 gcc_4:6.1.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-1 gcc-6_6.1.1-11+rpi1 gcc-6-base_6.1.1-11+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gfortran_4:6.1.1-1 gfortran-6_6.1.1-11+rpi1 gnupg_1.4.20-6 gpgv_1.4.20-6 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-5 hostname_3.18 icu-devtools_57.1-2 ifupdown_0.8.13 init_1.42 init-system-helpers_1.42 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 iproute2_4.6.0-1 kbd_2.0.3-2 keyboard-configuration_1.147 klibc-utils_2.0.4-9+rpi1 kmod_22-1.1 libacl1_2.2.52-3 libapparmor1_2.10.95-4 libapt-pkg5.0_1.3~pre3 libarchive-zip-perl_1.58-1 libasan2_5.4.1-1 libasan3_6.1.1-11+rpi1 libatm1_1:2.5.1-1.6 libatomic1_6.1.1-11+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.5-1 libaudit1_1:2.6.5-1 libblas-common_3.6.1-2 libblas-dev_3.6.1-2 libblas3_3.6.1-2 libblkid1_2.28-6 libboost-chrono1.61.0_1.61.0+dfsg-2.1 libboost-python-dev_1.61.0.2 libboost-python1.61-dev_1.61.0+dfsg-2.1 libboost-python1.61.0_1.61.0+dfsg-2.1 libboost-regex-dev_1.61.0.2 libboost-regex1.61-dev_1.61.0+dfsg-2.1 libboost-regex1.61.0_1.61.0+dfsg-2.1 libboost-serialization-dev_1.61.0.2 libboost-serialization1.61-dev_1.61.0+dfsg-2.1 libboost-serialization1.61.0_1.61.0+dfsg-2.1 libboost-system1.61.0_1.61.0+dfsg-2.1 libboost-test-dev_1.61.0.2 libboost-test1.61-dev_1.61.0+dfsg-2.1 libboost-test1.61.0_1.61.0+dfsg-2.1 libboost-timer1.61.0_1.61.0+dfsg-2.1 libboost1.61-dev_1.61.0+dfsg-2.1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.23-4 libc-dev-bin_2.23-4 libc6_2.23-4 libc6-dev_2.23-4 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.1.1-11+rpi1 libcomerr2_1.43.1-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libdb5.3_5.3.28-12 libdbus-1-3_1.10.8-1 libdebconfclient0_0.215 libdevmapper1.02.1_2:1.02.130-1 libdpkg-perl_1.18.10 libdrm2_2.4.70-1 libexpat1_2.2.0-1 libexpat1-dev_2.2.0-1 libfakeroot_1.21-1 libfdisk1_2.28-6 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.022-1 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-5-dev_5.4.1-1 libgcc-6-dev_6.1.1-11+rpi1 libgcc1_1:6.1.1-11+rpi1 libgcrypt20_1.7.2-2 libgdbm3_1.8.3-14 libgfortran-6-dev_6.1.1-11+rpi1 libgfortran3_6.1.1-11+rpi1 libglib2.0-0_2.48.1-2 libgmp10_2:6.1.1+dfsg-1 libgomp1_6.1.1-11+rpi1 libgpg-error0_1.24-1 libicu-dev_57.1-2 libicu57_57.1-2 libidn11_1.33-1 libisl15_0.17.1-1 libklibc_2.0.4-9+rpi1 libkmod2_22-1.1 liblapack-dev_3.6.1-2 liblapack3_3.6.1-2 liblocale-gettext-perl_1.07-3 liblz4-1_0.0~r131-2 liblzma5_5.1.1alpha+20120614-2.1 libmagic-mgc_1:5.28-4 libmagic1_1:5.28-4 libmount1_2.28-6 libmpc3_1.0.3-1 libmpdec2_2.4.2-1 libmpfr4_3.1.4-2 libmpich-dev_3.2-6 libmpich12_3.2-6 libncurses5_6.0+20160625-1 libncursesw5_6.0+20160625-1 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpcre3_2:8.39-1 libperl5.22_5.22.2-3 libpipeline1_1.4.1-2 libplymouth4_0.9.2-3 libpng12-0_1.2.54-6 libprocps6_2:3.3.12-2 libpython-dev_2.7.11-2 libpython-stdlib_2.7.11-2 libpython2.7_2.7.12-2 libpython2.7-dev_2.7.12-2 libpython2.7-minimal_2.7.12-2 libpython2.7-stdlib_2.7.12-2 libpython3-dev_3.5.1-4 libpython3-stdlib_3.5.1-4 libpython3.5_3.5.2-3 libpython3.5-dev_3.5.2-3 libpython3.5-minimal_3.5.2-3 libpython3.5-stdlib_3.5.2-3 libreadline6_6.3-8+b3 libseccomp2_2.3.1-2 libselinux1_2.5-3 libsemanage-common_2.5-1 libsemanage1_2.5-1 libsepol1_2.5-1 libsigsegv2_2.10-5 libsmartcols1_2.28-6 libsqlite3-0_3.13.0-1 libss2_1.43.1-1 libssl1.0.2_1.0.2h-1 libstdc++-5-dev_5.4.1-1 libstdc++-6-dev_6.1.1-11+rpi1 libstdc++6_6.1.1-11+rpi1 libsystemd0_230-7+b1 libtext-charwidth-perl_0.04-7+b6 libtext-iconv-perl_1.7-5+b7 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1 libtool_2.4.6-0.1 libubsan0_6.1.1-11+rpi1 libudev1_230-7+b1 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-5 libuuid1_2.28-6 libxc-dev_3.0.0-1 libxc4_3.0.0-1 libxml2_2.9.4+dfsg1-1+b1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_9.20160629+rpi1 m4_1.4.17-5 make_4.1-9 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.07-1 mawk_1.3.3-17 mime-support_3.60 mount_2.28-6 multiarch-support_2.23-4 ncurses-base_6.0+20160625-1 ncurses-bin_6.0+20160625-1 netbase_5.3 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.2-3 perl-base_5.22.2-3 perl-modules-5.22_5.22.2-3 po-debconf_1.0.19 procps_2:3.3.12-2 psmisc_22.21-2.1 python_2.7.11-2 python-dev_2.7.11-2 python-minimal_2.7.11-2 python2.7_2.7.12-2 python2.7-dev_2.7.12-2 python2.7-minimal_2.7.12-2 python3_3.5.1-4 python3-dev_3.5.1-4 python3-minimal_3.5.1-4 python3.5_3.5.2-3 python3.5-dev_3.5.2-3 python3.5-minimal_3.5.2-3 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-bagel-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-7.1 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_230-7+b1 systemd-sysv_230-7+b1 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1 tzdata_2016f-1 udev_230-7+b1 util-linux_2.28-6 xkb-data_2.17-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sat Aug 6 14:55:28 2016 UTC using RSA key ID 669CE1C2
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./bagel_0.0~git20160507-3.dsc
dpkg-source: info: extracting bagel in bagel-0.0~git20160507
dpkg-source: info: unpacking bagel_0.0~git20160507.orig.tar.gz
dpkg-source: info: unpacking bagel_0.0~git20160507-3.debian.tar.xz
dpkg-source: info: applying disable_large_integral_file.patch
dpkg-source: info: applying fix_linking_error.patch
dpkg-source: info: applying skip_failing_testcases.patch
dpkg-source: info: applying skip_mrci.patch
dpkg-source: info: applying add_missing_includes.patch
dpkg-source: info: applying install_all_basis_sets.patch
dpkg-source: info: applying gcc6.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-48db800c-de8e-4629-b742-61693d6a7a61
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package bagel
dpkg-buildpackage: info: source version 0.0~git20160507-3
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build bagel-0.0~git20160507
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with autoreconf
dh_testdir
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
rm -rf /<<PKGBUILDDIR>>/src/testsuite
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean
dh_clean
debian/rules build-arch
dh build-arch --with autoreconf
dh_testdir -a
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:17: installing './compile'
configure.ac:40: installing './config.guess'
configure.ac:40: installing './config.sub'
configure.ac:6: installing './install-sh'
configure.ac:6: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
--datadir=/usr/share/bagel \
--libdir=/usr/lib/bagel \
--enable-static \
--disable-shared \
--with-boost \
--with-libxc=yes \
--with-mpi=openmpi \
--disable-scalapack \
--enable-smith
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for python... /usr/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/dist-packages
checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
..openmpi requested..
checking for mpicc... mpicc
checking for mpicxx... mpicxx
checking whether we are using the GNU C compiler... (cached) yes
checking whether mpicc accepts -g... (cached) yes
checking for mpicc option to accept ISO C89... (cached) none needed
checking whether mpicc understands -c and -o together... (cached) yes
checking dependency style of mpicc... (cached) none
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether mpicxx accepts -g... (cached) yes
checking dependency style of mpicxx... (cached) none
checking whether mpicxx supports C++11 features by default... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... mpicxx -E
checking for ld used by mpicxx... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking for mpicxx option to produce PIC... -fPIC -DPIC
checking if mpicxx PIC flag -fPIC -DPIC works... yes
checking if mpicxx static flag -static works... no
checking if mpicxx supports -c -o file.o... yes
checking if mpicxx supports -c -o file.o... (cached) yes
checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for boostlib >= 1.53... yes
checking for main in -lboost_serialization-gcc-mt... no
checking for main in -lboost_serialization-mt... no
checking for main in -lboost_serialization... yes
checking if boost::serialization works... yes
checking for main in -lboost_regex-gcc-mt... no
checking for main in -lboost_regex-mt... no
checking for main in -lboost_regex... yes
checking for main in -lboost_unit_test_framework-gcc-mt... no
checking for main in -lboost_unit_test_framework-mt... no
checking for main in -lboost_unit_test_framework... yes
checking xc.h usability... yes
checking xc.h presence... yes
checking for xc.h... yes
checking for main in -lxc... yes
checking mpi.h usability... yes
checking mpi.h presence... yes
checking for mpi.h... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/util/Makefile
config.status: creating src/util/input/Makefile
config.status: creating src/util/io/Makefile
config.status: creating src/util/parallel/Makefile
config.status: creating src/util/math/Makefile
config.status: creating src/asd/multisite/Makefile
config.status: creating src/asd/dimer/Makefile
config.status: creating src/asd/dmrg/Makefile
config.status: creating src/asd/orbital/Makefile
config.status: creating src/asd/Makefile
config.status: creating src/wfn/Makefile
config.status: creating src/grad/Makefile
config.status: creating src/integral/Makefile
config.status: creating src/scf/Makefile
config.status: creating src/df/Makefile
config.status: creating src/prop/Makefile
config.status: creating src/smith/Makefile
config.status: creating src/molecule/Makefile
config.status: creating src/pt2/Makefile
config.status: creating src/ci/Makefile
config.status: creating src/ci/ciutil/Makefile
config.status: creating src/ci/fci/Makefile
config.status: creating src/ci/zfci/Makefile
config.status: creating src/ci/ras/Makefile
config.status: creating src/multi/Makefile
config.status: creating src/multi/casscf/Makefile
config.status: creating src/multi/zcasscf/Makefile
config.status: creating src/mat1e/Makefile
config.status: creating src/opt/Makefile
config.status: creating src/alglib/Makefile
config.status: creating src/basis/Makefile
config.status: creating bagel_config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a
make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Making all in src
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Making all in util
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/util'
Making all in parallel
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/util/parallel'
/bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -c -o process.lo process.cc
libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -I../../.. -g -O2 -DNDEBUG -c process.cc -o process.o
In file included from /usr/include/mpich/mpi.h:2231:0,
from ../../../src/util/parallel/mpi_interface.h:36,
from process.cc:27:
/usr/include/mpich/mpicxx.h:21:4: error: #error 'Please use the same version of GCC and g++ for compiling MPICH and user MPI programs'
# error 'Please use the same version of GCC and g++ for compiling MPICH and user MPI programs'
^~~~~
Makefile:444: recipe for target 'process.lo' failed
make[5]: *** [process.lo] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/util/parallel'
Makefile:500: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/util'
Makefile:584: recipe for target 'all-recursive' failed
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
Makefile:416: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
Makefile:348: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: make -j1 returned exit code 2
debian/rules:9: recipe for target 'build-arch' failed
make: *** [build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
--------------------------------------------------------------------------------
Build finished at 20160817-0409
Finished
--------
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 100140
Build-Time: 177
Distribution: stretch-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 552
Job: bagel_0.0~git20160507-3
Machine Architecture: armhf
Package: bagel
Package-Time: 799
Source-Version: 0.0~git20160507-3
Space: 100140
Status: attempted
Version: 0.0~git20160507-3
--------------------------------------------------------------------------------
Finished at 20160817-0409
Build needed 00:13:19, 100140k disc space