ataqv →
1.3.1+ds-2 →
armhf → 2023-12-18 05:36:29
sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023
+==============================================================================+
| ataqv 1.3.1+ds-2 (armhf) Mon, 18 Dec 2023 05:32:35 +0000 |
+==============================================================================+
Package: ataqv
Version: 1.3.1+ds-2
Source Version: 1.3.1+ds-2
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-6647410b-fc2b-4573-b275-16840305bee1' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/ataqv-z96usI/resolver-u3IWXR' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.3 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [15.0 MB]
Fetched 29.3 MB in 5s (5433 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ataqv' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/ataqv.git
Please use:
git clone https://salsa.debian.org/med-team/ataqv.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 4080 kB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main ataqv 1.3.1+ds-2 (dsc) [2249 B]
Get:2 http://172.17.4.1/private trixie-staging/main ataqv 1.3.1+ds-2 (tar) [4068 kB]
Get:3 http://172.17.4.1/private trixie-staging/main ataqv 1.3.1+ds-2 (diff) [9384 B]
Fetched 4080 kB in 1s (7642 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ataqv-z96usI/ataqv-1.3.1+ds' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ataqv-z96usI' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), libboost-filesystem-dev, libboost-iostreams-dev, libboost-system-dev, libboost-chrono-dev, libhts-dev, libncurses-dev, zlib1g-dev, libjs-jquery, libjs-jquery-datatables, libjs-jquery-datatables-extensions, fonts-font-awesome, node-normalize.css, help2man, python3, node-d3, debhelper, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), libboost-filesystem-dev, libboost-iostreams-dev, libboost-system-dev, libboost-chrono-dev, libhts-dev, libncurses-dev, zlib1g-dev, libjs-jquery, libjs-jquery-datatables, libjs-jquery-datatables-extensions, fonts-font-awesome, node-normalize.css, help2man, python3, node-d3, debhelper, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [902 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [934 B]
Fetched 2445 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils bsdutils debhelper
dh-autoreconf dh-strip-nondeterminism dpkg-dev dwz file fonts-font-awesome
gettext gettext-base groff-base help2man icu-devtools intltool-debian
libarchive-zip-perl libblkid1 libboost-chrono-dev libboost-chrono1.74-dev
libboost-chrono1.74.0 libboost-filesystem-dev libboost-filesystem1.74-dev
libboost-filesystem1.74.0 libboost-iostreams-dev libboost-iostreams1.74-dev
libboost-iostreams1.74.0 libboost-regex1.74-dev libboost-regex1.74.0
libboost-system-dev libboost-system1.74-dev libboost-system1.74.0
libboost1.74-dev libbrotli1 libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libdeflate-dev libdeflate0 libdpkg-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev
libicu72 libjs-d3-format libjs-jquery libjs-jquery-datatables
libjs-jquery-datatables-extensions liblzma-dev liblzma5 libmagic-mgc
libmagic1 libmount1 libncurses-dev libncurses6 libncursesw6 libnghttp2-14
libpipeline1 libpsl5 libpython3-stdlib libpython3.11-minimal
libpython3.11-stdlib librtmp1 libsmartcols1 libssh2-1 libsub-override-perl
libtinfo6 libtool libuchardet0 libuuid1 libxml2 m4 man-db media-types mount
ncurses-base ncurses-bin netbase node-commander node-d3 node-d3-array
node-d3-axis node-d3-brush node-d3-chord node-d3-collection node-d3-color
node-d3-contour node-d3-dispatch node-d3-drag node-d3-dsv node-d3-ease
node-d3-fetch node-d3-force node-d3-format node-d3-geo node-d3-hierarchy
node-d3-interpolate node-d3-path node-d3-polygon node-d3-quadtree
node-d3-queue node-d3-random node-d3-scale node-d3-scale-chromatic
node-d3-selection node-d3-shape node-d3-time node-d3-time-format
node-d3-timer node-d3-transition node-d3-voronoi node-d3-zoom
node-iconv-lite node-normalize.css node-rw node-safe-buffer po-debconf
python3 python3-minimal python3.11 python3.11-minimal sensible-utils
util-linux xz-utils zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make debian-keyring
gettext-doc libasprintf-dev libgettextpo-dev groff libboost1.74-doc
libboost-atomic1.74-dev libboost-container1.74-dev libboost-context1.74-dev
libboost-contract1.74-dev libboost-coroutine1.74-dev
libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-graph1.74-dev libboost-graph-parallel1.74-dev
libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
libboost-program-options1.74-dev libboost-python1.74-dev
libboost-random1.74-dev libboost-serialization1.74-dev
libboost-stacktrace1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev
libssh2-1-dev pkg-config git bzr icu-doc liblzma-doc cryptsetup-bin
ncurses-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
apparmor less www-browser nfs-common libjs-html5shiv libmail-box-perl
python3-doc python3-tk python3-venv python3.11-venv python3.11-doc
binfmt-support dosfstools kbd util-linux-extra util-linux-locales
Recommended packages:
libalgorithm-merge-perl curl | wget | lynx ca-certificates
libfile-fcntllock-perl libarchive-cpio-perl javascript-common libgpm2
publicsuffix libltdl-dev uuid-runtime libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file fonts-font-awesome gettext
gettext-base groff-base help2man icu-devtools intltool-debian
libarchive-zip-perl libboost-chrono-dev libboost-chrono1.74-dev
libboost-chrono1.74.0 libboost-filesystem-dev libboost-filesystem1.74-dev
libboost-filesystem1.74.0 libboost-iostreams-dev libboost-iostreams1.74-dev
libboost-iostreams1.74.0 libboost-regex1.74-dev libboost-regex1.74.0
libboost-system-dev libboost-system1.74-dev libboost-system1.74.0
libboost1.74-dev libbrotli1 libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libdeflate-dev libdeflate0 libelf1 libexpat1
libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev
libicu72 libjs-d3-format libjs-jquery libjs-jquery-datatables
libjs-jquery-datatables-extensions liblzma-dev libmagic-mgc libmagic1
libncurses-dev libncurses6 libnghttp2-14 libpipeline1 libpsl5
libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib librtmp1
libssh2-1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
media-types netbase node-commander node-d3 node-d3-array node-d3-axis
node-d3-brush node-d3-chord node-d3-collection node-d3-color node-d3-contour
node-d3-dispatch node-d3-drag node-d3-dsv node-d3-ease node-d3-fetch
node-d3-force node-d3-format node-d3-geo node-d3-hierarchy
node-d3-interpolate node-d3-path node-d3-polygon node-d3-quadtree
node-d3-queue node-d3-random node-d3-scale node-d3-scale-chromatic
node-d3-selection node-d3-shape node-d3-time node-d3-time-format
node-d3-timer node-d3-transition node-d3-voronoi node-d3-zoom
node-iconv-lite node-normalize.css node-rw node-safe-buffer po-debconf
python3 python3-minimal python3.11 python3.11-minimal
sbuild-build-depends-main-dummy sensible-utils zlib1g-dev
The following packages will be upgraded:
bsdutils dpkg-dev libblkid1 libdpkg-perl liblzma5 libmount1 libncursesw6
libsmartcols1 libtinfo6 libuuid1 mount ncurses-base ncurses-bin util-linux
xz-utils
15 upgraded, 118 newly installed, 0 to remove and 61 not upgraded.
1 not fully installed or removed.
Need to get 57.5 MB/59.5 MB of archives.
After this operation, 331 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [992 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf mount armhf 2.39.3-2 [134 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf bsdutils armhf 1:2.39.3-2 [86.6 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf ncurses-bin armhf 6.4+20231209-1 [422 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf util-linux armhf 2.39.3-2 [1113 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf ncurses-base all 6.4+20231209-1 [267 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.7-2 [801 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.7-2 [1677 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf netbase all 6.4 [12.8 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf liblzma5 armhf 5.4.5-0.1 [226 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf libtinfo6 armhf 6.4+20231209-1 [325 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libncursesw6 armhf 6.4+20231209-1 [107 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf libuuid1 armhf 2.39.3-2 [28.2 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.7-2 [1694 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.7-2 [590 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:20 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf libblkid1 armhf 2.39.3-2 [145 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf libmount1 armhf 2.39.3-2 [168 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf libsmartcols1 armhf 2.39.3-2 [102 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.8-1 [65.5 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.3-2 [81.2 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.12.0-1 [1358 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf sensible-utils all 0.0.20 [19.3 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-14 [157 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf xz-utils armhf 5.4.5-0.1 [499 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-14 [496 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.8 [82.1 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.10-1 [10.6 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:47 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-4 [9009 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-14 [1203 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.8 [956 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf help2man armhf 1.49.3 [198 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf icu-devtools armhf 72.1-4 [174 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf libboost1.74-dev armhf 1.74.0+ds1-23 [9511 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf libboost-chrono1.74.0 armhf 1.74.0+ds1-23 [224 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf libboost-chrono1.74-dev armhf 1.74.0+ds1-23 [231 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf libboost-chrono-dev armhf 1.74.0.3+b4 [5232 B]
Get:62 http://172.17.4.1/private trixie-staging/main armhf libboost-filesystem1.74.0 armhf 1.74.0+ds1-23 [250 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf libboost-system1.74.0 armhf 1.74.0+ds1-23 [218 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf libboost-system1.74-dev armhf 1.74.0+ds1-23 [219 kB]
Get:65 http://172.17.4.1/private trixie-staging/main armhf libboost-filesystem1.74-dev armhf 1.74.0+ds1-23 [261 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf libboost-filesystem-dev armhf 1.74.0.3+b4 [4636 B]
Get:67 http://172.17.4.1/private trixie-staging/main armhf libboost-regex1.74.0 armhf 1.74.0+ds1-23 [421 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf libicu-dev armhf 72.1-4 [9956 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libboost-regex1.74-dev armhf 1.74.0+ds1-23 [526 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0+ds1-23 [236 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams1.74-dev armhf 1.74.0+ds1-23 [245 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams-dev armhf 1.74.0.3+b4 [4592 B]
Get:73 http://172.17.4.1/private trixie-staging/main armhf libboost-system-dev armhf 1.74.0.3+b4 [4744 B]
Get:74 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.1.0-2 [280 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.58.0-1 [61.7 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-3 [195 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf libcurl3-gnutls armhf 8.4.0-2+rpi1 [358 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf libcurl4-gnutls-dev armhf 8.4.0-2+rpi1 [441 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf libdeflate-dev armhf 1.18-1 [45.8 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf libhtscodecs2 armhf 1.5.2-1 [60.0 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf libhts3 armhf 1.18+ds-1 [380 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf liblzma-dev armhf 5.4.5-0.1 [278 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libhts-dev armhf 1.18+ds-1 [1539 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libjs-d3-format all 1:1.4.5+~1.4.2-2 [17.7 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libncurses6 armhf 6.4+20231209-1 [80.5 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf libncurses-dev armhf 6.4+20231209-1 [290 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf node-commander all 9.4.1-1 [65.3 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf node-d3-array all 3.2.0+~cs5.0.6-2 [44.1 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf node-d3-axis all 1.0.12+~1.0.16-1 [13.7 kB]
Ign:96 http://172.17.4.1/private trixie-staging/main armhf node-d3-axis all 1.0.12+~1.0.16-1
Get:97 http://172.17.4.1/private trixie-staging/main armhf node-d3-dispatch all 1.0.6+~1.0.9-1 [9560 B]
Get:98 http://172.17.4.1/private trixie-staging/main armhf node-d3-selection all 1.4.1+~1.4.3-1 [42.1 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf node-d3-drag all 1.2.5+~1.2.5-1 [18.7 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf node-d3-color all 1.4.1+~1.4.2-1 [19.1 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf node-d3-interpolate all 1.4.0+~1.4.2-1 [23.3 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf node-d3-ease all 1.0.7+~1.0.11-1 [12.2 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf node-d3-timer all 1.0.10+~1.0.10-1 [10.3 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf node-d3-transition all 1.3.2+~1.3.2-1 [28.2 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf node-d3-brush all 1.1.6+~1.1.5-1 [185 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf node-d3-path all 1.0.9+~1.0.9-1 [10.2 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf node-d3-chord all 1.0.6+~1.0.11-1 [13.9 kB]
Get:108 http://172.17.4.1/private trixie-staging/main armhf node-d3-collection all 1.0.7+~1.0.10-1 [16.9 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf node-d3-contour all 1.3.2+~1.3.3-1 [17.2 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf node-safe-buffer all 5.2.1+~cs2.1.2-3 [15.5 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf node-iconv-lite all 0.6.3-3 [115 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf node-d3-queue all 3.0.7-13 [10.2 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf node-rw all 1.3.3-5 [7428 B]
Get:114 http://172.17.4.1/private trixie-staging/main armhf node-d3-dsv all 1.2.0+~1.2.3-1 [17.4 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf node-d3-fetch all 1.2.0+~1.2.2-1 [9844 B]
Get:116 http://172.17.4.1/private trixie-staging/main armhf node-d3-quadtree all 1.0.7+~1.0.9-1 [16.0 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf node-d3-force all 2.1.1+~2.1.4-1 [30.2 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf node-d3-format all 1:1.4.5+~1.4.2-2 [12.6 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf node-d3-geo all 1.12.1+~1.12.4-1 [65.5 kB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf node-d3-hierarchy all 1.1.9+~1.1.8-1 [34.1 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf node-d3-polygon all 1.0.6+~1.0.8-1 [8580 B]
Get:122 http://172.17.4.1/private trixie-staging/main armhf node-d3-random all 1.1.2+~1.1.3-1 [8908 B]
Get:123 http://172.17.4.1/private trixie-staging/main armhf node-d3-time all 1.1.0+~1.1.1-1 [18.7 kB]
Get:124 http://172.17.4.1/private trixie-staging/main armhf node-d3-time-format all 2.3.0+~2.3.1-1 [22.9 kB]
Get:125 http://172.17.4.1/private trixie-staging/main armhf node-d3-scale all 2.2.2+~2.2.6-1 [42.7 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf node-d3-scale-chromatic all 1.5.0+~1.5.1-1 [21.4 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf node-d3-shape all 1.3.7+~1.3.8-1 [54.8 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf node-d3-voronoi all 1.1.4+~1.1.9-1 [19.8 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf node-d3-zoom all 1.8.3+~1.8.4-1 [26.8 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf node-d3 all 5.16.0+~cs5.28.10-1 [220 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf node-normalize.css all 8.0.1-5 [12.7 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf node-d3-axis all 1.0.12+~1.0.16-1 [13.7 kB]
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep 1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc-12_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 libc6-dev_2.37-12+rpi2 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++-13-dev_13.2.0-5+rpi1 libstdc++6_13.2.0-5+rpi1 linux-libc-dev_6.5.6-1+rpi1
Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.2 bash_5.2.15-2 binutils_2.41-6+rpi1 binutils-arm-linux-gnueabihf_2.41-6+rpi1 binutils-common_2.41-6+rpi1 bsdextrautils_2.39.3-2 bsdutils_1:2.39.3-2 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:13.2.0-1+rpi1 cpp-12_12.3.0-10+rpi1 cpp-13_13.2.0-5+rpi1 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.8 debianutils_5.14 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dirmngr_2.2.40-1.1 dpkg_1.22.1+rpi1 dpkg-dev_1.22.1+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1 g++_4:13.2.0-1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc_4:13.2.0-1+rpi1 gcc-10-base_10.4.0-7+rpi1 gcc-12_12.3.0-10+rpi1 gcc-12-base_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 gcc-13-base_13.2.0-5+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-14 gettext-base_0.21-14 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1 help2man_1.49.3 hostname_3.23+nmu1 icu-devtools_72.1-4 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libasan8_13.2.0-5+rpi1 libassuan0_2.5.6-1 libatomic1_13.2.0-5+rpi1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbinutils_2.41-6+rpi1 libblkid1_2.39.3-2 libboost-chrono-dev_1.74.0.3+b4 libboost-chrono1.74-dev_1.74.0+ds1-23 libboost-chrono1.74.0_1.74.0+ds1-23 libboost-filesystem-dev_1.74.0.3+b4 libboost-filesystem1.74-dev_1.74.0+ds1-23 libboost-filesystem1.74.0_1.74.0+ds1-23 libboost-iostreams-dev_1.74.0.3+b4 libboost-iostreams1.74-dev_1.74.0+ds1-23 libboost-iostreams1.74.0_1.74.0+ds1-23 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node-d3-polygon_1.0.6+~1.0.8-1 node-d3-quadtree_1.0.7+~1.0.9-1 node-d3-queue_3.0.7-13 node-d3-random_1.1.2+~1.1.3-1 node-d3-scale_2.2.2+~2.2.6-1 node-d3-scale-chromatic_1.5.0+~1.5.1-1 node-d3-selection_1.4.1+~1.4.3-1 node-d3-shape_1.3.7+~1.3.8-1 node-d3-time_1.1.0+~1.1.1-1 node-d3-time-format_2.3.0+~2.3.1-1 node-d3-timer_1.0.10+~1.0.10-1 node-d3-transition_1.3.2+~1.3.2-1 node-d3-voronoi_1.1.4+~1.1.9-1 node-d3-zoom_1.8.3+~1.8.4-1 node-iconv-lite_0.6.3-3 node-normalize.css_8.0.1-5 node-rw_1.3.3-5 node-safe-buffer_5.2.1+~cs2.1.2-3 passwd_1:4.13+dfsg1-3 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.36_5.36.0-9 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 python3_3.11.4-5 python3-minimal_3.11.4-5 python3.11_3.11.7-2 python3.11-minimal_3.11.7-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sysvinit-utils_3.08-3 tar_1.34+dfsg-1.2 tzdata_2023c-10 usr-is-merged_37 util-linux_2.39.3-2 xz-utils_5.4.5-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: ataqv
Binary: ataqv
Architecture: any
Version: 1.3.1+ds-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <crusoe@debian.org>
Homepage: https://github.com/ParkerLab/ataqv/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/ataqv
Vcs-Git: https://salsa.debian.org/med-team/ataqv.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), libboost-filesystem-dev, libboost-iostreams-dev, libboost-system-dev, libboost-chrono-dev, libhts-dev, libncurses-dev, zlib1g-dev, libjs-jquery, libjs-jquery-datatables, libjs-jquery-datatables-extensions, fonts-font-awesome, node-normalize.css, help2man, python3, node-d3, debhelper
Package-List:
ataqv deb science optional arch=any
Checksums-Sha1:
d2533715129c79f7bc3e11a9673efedf0348303b 4068080 ataqv_1.3.1+ds.orig.tar.xz
c8868f6738fdc44c87cc1b8218ed6e1255a37ddf 9384 ataqv_1.3.1+ds-2.debian.tar.xz
Checksums-Sha256:
6e996bb0dfa6b92b17537af20680827fd66f5b91b2f0bb7268bf21ff1cffd939 4068080 ataqv_1.3.1+ds.orig.tar.xz
94a367bb722ed2d8e1377f5eb1c6faec9c1686e8ebccf654a9020e265f16f1ad 9384 ataqv_1.3.1+ds-2.debian.tar.xz
Files:
2738a7faf0c6728c73c2b24fb895c2fa 4068080 ataqv_1.3.1+ds.orig.tar.xz
9514930e1d2305c54d62f5a91fd24f8e 9384 ataqv_1.3.1+ds-2.debian.tar.xz
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-----END PGP SIGNATURE-----
gpgv: Signature made Fri Dec 15 14:52:14 2023 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@emlwks999.eu"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./ataqv_1.3.1+ds-2.dsc: no acceptable signature found
dpkg-source: info: extracting ataqv in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking ataqv_1.3.1+ds.orig.tar.xz
dpkg-source: info: unpacking ataqv_1.3.1+ds-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying modernize
dpkg-source: info: applying no_cov
dpkg-source: info: applying python3
dpkg-source: info: applying packaged_js
dpkg-source: info: applying spelling
dpkg-source: info: applying clean_less
dpkg-source: info: applying reproducible_build
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-6647410b-fc2b-4573-b275-16840305bee1
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package ataqv
dpkg-buildpackage: info: source version 1.3.1+ds-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp -sf /usr/share/nodejs/d3/dist/d3.min.js src/web/js/d3.min.js
cp -sf /usr/share/javascript/jquery-datatables-extensions/JSZip/jszip.min.js src/web/js/jszip.min.js
cp -sf /usr/share/javascript/jquery-datatables-extensions/Buttons/css/buttons.dataTables.min.css src/web/css/datatables.buttons.min.css
cp -sf /usr/share/javascript/jquery-datatables/css/jquery.dataTables.min.css src/web/css/datatables.min.css
cp -sf /usr/share/fonts-font-awesome/css/font-awesome.min.css src/web/css/font-awesome.min.css
cp -sf /usr/share/javascript/normalize.css/normalize.css src/web/css/normalize.css
cp -sf /usr/share/fonts-font-awesome/fonts/* src/web/fonts/
cp -s /usr/share/javascript/jquery/jquery.min.js \
/usr/share/javascript/jquery-datatables-extensions/pdfmake/build/pdfmake.min.js \
/usr/share/javascript/jquery-datatables/jquery.dataTables.min.js \
/usr/share/javascript/jquery-datatables-extensions/Buttons/js/dataTables.buttons.min.js \
/usr/share/javascript/jquery-datatables-extensions/Buttons/js/buttons.colVis.min.js \
/usr/share/javascript/jquery-datatables-extensions/Buttons/js/buttons.html5.min.js \
/usr/share/javascript/jquery-datatables-extensions/Buttons/js/buttons.print.min.js \
/usr/share/javascript/jquery-datatables-extensions/Responsive/js/dataTables.responsive.min.js \
src/web/js/
rm -f src/web/js/datatables.min.js
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- all testing/run_ataqv_tests
make -j4 "INSTALL=install --strip-program=true" all testing/run_ataqv_tests
make[2]: Entering directory '/<<PKGBUILDDIR>>'
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/ataqv.o -c /<<PKGBUILDDIR>>/src/cpp/ataqv.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/Features.o -c /<<PKGBUILDDIR>>/src/cpp/Features.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/HTS.o -c /<<PKGBUILDDIR>>/src/cpp/HTS.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/IO.o -c /<<PKGBUILDDIR>>/src/cpp/IO.cpp
In file included from /usr/include/c++/13/map:62,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:10,
from /<<PKGBUILDDIR>>/src/cpp/Features.hpp:12,
from /<<PKGBUILDDIR>>/src/cpp/Features.cpp:11:
/usr/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >]’:
/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:63:
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferenceFeatureCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >]’,
inlined from ‘ReferenceFeatureCollection* FeatureTree::get_reference_feature_collection(const std::string&)’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:127:32:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/Utils.hpp:6,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:19:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}; _Tp = std::pair<long long unsigned int, std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}; _Tp = std::pair<long long unsigned int, std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair<long long unsigned int, std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘std::vector<std::__cxx11::basic_string<char> > FeatureTree::get_references_by_feature_count()’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:142:46:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> >*, std::vector<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > > >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Feature&}; _Tp = Feature; _Alloc = std::allocator<Feature>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Feature>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Feature; _Alloc = std::allocator<Feature>]’,
inlined from ‘void ReferenceFeatureCollection::add(const Feature&)’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:101:23:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferenceFeatureCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >]’,
inlined from ‘void FeatureTree::add(Feature&)’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:122:27:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/Metrics.o -c /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/Peaks.o -c /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp
In file included from /usr/include/c++/13/bits/stl_algo.h:61,
from /usr/include/c++/13/algorithm:61,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:7:
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Distance = int; _Tp = Peak; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1792:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1792 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1812 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/Utils.hpp:6,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:19,
from /<<PKGBUILDDIR>>/src/cpp/Features.hpp:12,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.hpp:13,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:13:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Peak&}; _Tp = Peak; _Alloc = std::allocator<Peak>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Peak>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:62,
from /usr/include/boost/system/detail/std_interoperability.hpp:11,
from /usr/include/boost/system/error_code.hpp:963,
from /usr/include/boost/chrono/detail/system.hpp:11,
from /usr/include/boost/chrono/system_clocks.hpp:64,
from /usr/include/boost/chrono/chrono.hpp:13,
from /usr/include/boost/chrono/include.hpp:15,
from /usr/include/boost/chrono.hpp:17,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:11:
/usr/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >]’:
/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:63:
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferencePeakCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >]’,
inlined from ‘ReferencePeakCollection* PeakTree::get_reference_peaks(const std::string&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:121:32:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1792:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1792 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1812 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1918 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/Utils.o -c /<<PKGBUILDDIR>>/src/cpp/Utils.cpp
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘std::vector<Peak> PeakTree::list_peaks()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:197:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:200:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:200:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘void ReferencePeakCollection::sort()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:105:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘void ReferencePeakCollection::sort()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:105:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘void ReferencePeakCollection::add(const Peak&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:67:20:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferencePeakCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >]’,
inlined from ‘void PeakTree::add(Peak&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:110:24:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Distance = int; _Tp = Peak; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_heap.h:340:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
340 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~~~
/usr/include/c++/13/bits/stl_heap.h:340:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1918 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1910:25,
inlined from ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1926:27:
/usr/include/c++/13/bits/stl_algo.h:1635:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1635 | std::__make_heap(__first, __middle, __comp);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/run_ataqv_tests.o -c /<<PKGBUILDDIR>>/src/cpp/run_ataqv_tests.cpp
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_size_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:221:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_size_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:224:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_size_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:224:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_overlapping_hqaa_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:209:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_overlapping_hqaa_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:212:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_overlapping_hqaa_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:212:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/test_features.o -c /<<PKGBUILDDIR>>/src/cpp/test_features.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/test_hts.o -c /<<PKGBUILDDIR>>/src/cpp/test_hts.cpp
In file included from /<<PKGBUILDDIR>>/src/cpp/test_features.cpp:1:
/<<PKGBUILDDIR>>/src/cpp/test_features.cpp: In function ‘void ____C_A_T_C_H____T_E_S_T____167()’:
/<<PKGBUILDDIR>>/src/cpp/test_features.cpp:171:47: warning: catching polymorphic type ‘class std::out_of_range’ by value [-Wcatch-value=]
171 | REQUIRE_THROWS_AS(collection.add(f), std::out_of_range);
| ^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/src/cpp/test_hts.cpp:3:
/<<PKGBUILDDIR>>/src/cpp/test_hts.cpp: In function ‘void ____C_A_T_C_H____T_E_S_T____169()’:
/<<PKGBUILDDIR>>/src/cpp/test_hts.cpp:200:57: warning: catching polymorphic type ‘class HTSException’ by value [-Wcatch-value=]
200 | REQUIRE_THROWS_AS(record_to_string(header, record), HTSException);
| ^~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_algo.h:61,
from /usr/include/c++/13/algorithm:61,
from /<<PKGBUILDDIR>>/src/cpp/catch.hpp:76:
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >; _Distance = int; _Tp = Feature; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1812 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
In file included from /usr/include/c++/13/map:62,
from /usr/include/boost/system/detail/std_interoperability.hpp:11,
from /usr/include/boost/system/error_code.hpp:963,
from /usr/include/boost/chrono/detail/system.hpp:11,
from /usr/include/boost/chrono/system_clocks.hpp:64,
from /usr/include/boost/chrono/chrono.hpp:13,
from /usr/include/boost/chrono/include.hpp:15,
from /usr/include/boost/chrono.hpp:17,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:16:
/usr/include/c++/13/bits/stl_tree.h: In function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]’:
/usr/include/c++/13/bits/stl_tree.h:2210:5: note: parameter passing for argument of type ‘std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator’ changed in GCC 7.1
2210 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1918 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/test_io.o -c /<<PKGBUILDDIR>>/src/cpp/test_io.cpp
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘void ____C_A_T_C_H____T_E_S_T____61()’ at /<<PKGBUILDDIR>>/src/cpp/test_features.cpp:67:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Feature*, vector<Feature> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘void ____C_A_T_C_H____T_E_S_T____61()’ at /<<PKGBUILDDIR>>/src/cpp/test_features.cpp:67:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/test_metrics.o -c /<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/Utils.hpp:6,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:19,
from /<<PKGBUILDDIR>>/src/cpp/Features.hpp:12,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:18:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Feature&}; _Tp = Feature; _Alloc = std::allocator<Feature>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Feature>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Feature; _Alloc = std::allocator<Feature>]’,
inlined from ‘void MetricsCollector::load_excluded_regions()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:700:39:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<long double>::iterator’ changed in GCC 7.1
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >::iterator’ changed in GCC 7.1
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘void nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::push_back(const nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:5311:33:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/test_peaks.o -c /<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp
In file included from /<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp:1:
/<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp: In function ‘void ____C_A_T_C_H____T_E_S_T____172()’:
/<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp:181:44: warning: catching polymorphic type ‘class std::out_of_range’ by value [-Wcatch-value=]
181 | REQUIRE_THROWS_AS(rpc.add(peak3), std::out_of_range);
| ^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp:3:
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp: In function ‘void ____C_A_T_C_H____T_E_S_T____170()’:
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp:173:56: warning: catching polymorphic type ‘class FileException’ by value [-Wcatch-value=]
173 | REQUIRE_THROWS_AS(collector.load_alignments(), FileException);
| ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp:178:56: warning: catching polymorphic type ‘class FileException’ by value [-Wcatch-value=]
178 | REQUIRE_THROWS_AS(collector.load_alignments(), FileException);
| ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp: In function ‘void ____C_A_T_C_H____T_E_S_T____243()’:
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp:249:52: warning: catching polymorphic type ‘class FileException’ by value [-Wcatch-value=]
249 | REQUIRE_THROWS_AS(collector.load_alignments(), FileException);
| ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp: In function ‘void ____C_A_T_C_H____T_E_S_T____252()’:
/<<PKGBUILDDIR>>/src/cpp/test_metrics.cpp:259:52: warning: catching polymorphic type ‘class FileException’ by value [-Wcatch-value=]
259 | REQUIRE_THROWS_AS(collector.load_alignments(), FileException);
| ^~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’,
inlined from ‘void Metrics::add_alignment(const bam_hdr_t*, const bam1_t*)’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:893:59:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/13/memory:69,
from /<<PKGBUILDDIR>>/src/cpp/catch.hpp:568:
/usr/include/c++/13/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*]’:
/usr/include/c++/13/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >’ changed in GCC 7.1
113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >’ changed in GCC 7.1
In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >; _ForwardIterator = Peak*; bool _TrivialValueTypes = false]’,
inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:185:15,
inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*; _Tp = Peak]’ at /usr/include/c++/13/bits/stl_uninitialized.h:373:37,
inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’ at /usr/include/c++/13/bits/stl_vector.h:603:31,
inlined from ‘ReferencePeakCollection::ReferencePeakCollection(const ReferencePeakCollection&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.hpp:29:7,
inlined from ‘void ____C_A_T_C_H____T_E_S_T____155()’ at /<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp:166:68:
/usr/include/c++/13/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >’ changed in GCC 7.1
137 | { return std::__do_uninit_copy(__first, __last, __result); }
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/src/cpp/Metrics.hpp:16,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:21:
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In function ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(std::initializer_list<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:2082:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
2082 | basic_json(std::initializer_list<basic_json> init,
| ^~~~~~~~~~
In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >; _ForwardIterator = Peak*; bool _TrivialValueTypes = false]’,
inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:185:15,
inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*; _Tp = Peak]’ at /usr/include/c++/13/bits/stl_uninitialized.h:373:37,
inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’ at /usr/include/c++/13/bits/stl_vector.h:603:31,
inlined from ‘ReferencePeakCollection::ReferencePeakCollection(const ReferencePeakCollection&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.hpp:29:7,
inlined from ‘void ____C_A_T_C_H____T_E_S_T____100()’ at /<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp:125:68:
/usr/include/c++/13/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >’ changed in GCC 7.1
137 | { return std::__do_uninit_copy(__first, __last, __result); }
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >; _ForwardIterator = Peak*; bool _TrivialValueTypes = false]’,
inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:185:15,
inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const Peak*, vector<Peak> >; _ForwardIterator = Peak*; _Tp = Peak]’ at /usr/include/c++/13/bits/stl_uninitialized.h:373:37,
inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’ at /usr/include/c++/13/bits/stl_vector.h:603:31,
inlined from ‘ReferencePeakCollection::ReferencePeakCollection(const ReferencePeakCollection&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.hpp:29:7,
inlined from ‘void ____C_A_T_C_H____T_E_S_T____100()’ at /<<PKGBUILDDIR>>/src/cpp/test_peaks.cpp:131:70:
/usr/include/c++/13/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const Peak*, std::vector<Peak> >’ changed in GCC 7.1
137 | { return std::__do_uninit_copy(__first, __last, __result); }
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In function ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(std::initializer_list<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:2082:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp: In member function ‘nlohmann::json Library::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1378:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1378 | };
| ^
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::push_back(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>&&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:5275:33:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_pair.h:61,
from /usr/include/c++/13/tuple:38,
from /usr/include/c++/13/mutex:40,
from /usr/include/c++/13/future:40,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:10:
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In static member function ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/catch.hpp:569:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’:
/usr/include/c++/13/bits/vector.tcc:529:5: note: parameter passing for argument of type ‘std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >::iterator’ changed in GCC 7.1
529 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, size_type, const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator[](size_type) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:3730:38:
/usr/include/c++/13/bits/stl_vector.h:1437:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
1437 | _M_fill_insert(begin() + __offset, __n, __x);
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1394:22:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = double&; <template-parameter-1-1> = double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = double&; U = double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1493:23:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = const long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = const long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = const long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = const long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = nlohmann::basic_json<>; _Args = {const long double&}]’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:120:21,
inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, std::vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*; bool _TrivialValueTypes = false]’ at /usr/include/c++/13/bits/stl_uninitialized.h:137:32,
inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:185:15,
inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*; _Tp = nlohmann::basic_json<>]’ at /usr/include/c++/13/bits/stl_uninitialized.h:373:37,
inlined from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const long double*, std::vector<long double> >; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:1692:33,
inlined from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, std::vector<long double> >; <template-parameter-2-2> = void; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:708:23,
inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >; _Args = {__gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >, __gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >}; _Tp = std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/new_allocator.h:187:4,
inlined from ‘static T* nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::create(Args&& ...) [with T = std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >; Args = {__gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >, __gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >}; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:1634:24,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::array>::construct(BasicJsonType&, const CompatibleArrayType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleArrayType = std::vector<long double>; typename std::enable_if<(! std::is_same<CompatibleArrayType, typename BasicJsonType::array_t>::value), int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:332:77,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, const CompatibleArrayType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleArrayType = std::vector<long double>; typename std::enable_if<(is_compatible_array_type<BasicJsonType, CompatibleArrayType>::value || std::is_same<typename BasicJsonType::array_t, CompatibleArrayType>::value), int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:581:52,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = const std::vector<long double>&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = const std::vector<long double>&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = const std::vector<long double>&; <template-parameter-1-1> = std::vector<long double>; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = const std::vector<long double>&; U = std::vector<long double>; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘constexpr std::pair<_T1, _T2>::pair(const std::pair<_U1, _U2>&) [with _U1 = const std::__cxx11::basic_string<char>; _U2 = std::vector<long double>; typename std::enable_if<(std::_PCC<((! std::is_same<_T1, _U1>::value) || (! std::is_same<_T2, _U2>::value)), _T1, _T2>::_ConstructiblePair<_U1, _U2>() && std::_PCC<((! std::is_same<_T1, _U1>::value) || (! std::is_same<_T2, _U2>::value)), _T1, _T2>::_ImplicitlyConvertiblePair<_U1, _U2>()), bool>::type <anonymous> = true; _T1 = const std::__cxx11::basic_string<char>; _T2 = nlohmann::basic_json<>]’ at /usr/include/c++/13/bits/stl_pair.h:586:22,
inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Tp = std::_Rb_tree_node<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/new_allocator.h:187:4,
inlined from ‘static void std::allocator_traits<std::allocator<_Tp1> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Tp = std::_Rb_tree_node<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/alloc_traits.h:537:17,
inlined from ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_construct_node(_Link_type, _Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:597:32,
inlined from ‘std::_Rb_tree_node<_Val>* std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_create_node(_Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:614:21,
inlined from ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_Auto_node::_Auto_node(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>&, _Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:1637:32,
inlined from ‘std::pair<std::_Rb_tree_iterator<_Val>, bool> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_unique(_Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:2434:13,
inlined from ‘std::__enable_if_t<(! std::is_same<_Val, typename std::iterator_traits<_InputIterator>::value_type>::value)> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_range_unique(_InputIterator, _InputIterator) [with _InputIterator = std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::vector<long double> > >; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:1112:23,
inlined from ‘std::map<_Key, _Tp, _Compare, _Alloc>::map(_InputIterator, _InputIterator) [with _InputIterator = std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::vector<long double> > >; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::basic_json<>; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_map.h:287:31,
inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::map<std::__cxx11::basic_string<char>, nlohmann::basic_json<>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > > >; _Args = {std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >, std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >}; _Tp = std::map<std::__cxx11::basic_string<char>, nlohmann::basic_json<>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > > >]’ at /usr/include/c++/13/bits/new_allocator.h:187:4,
inlined from ‘static T* nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::create(Args&& ...) [with T = std::map<std::__cxx11::basic_string<char>, nlohmann::basic_json<>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > > >; Args = {std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >, std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >}; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:1634:24,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::object>::construct(BasicJsonType&, const CompatibleObjectType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleObjectType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; typename std::enable_if<(! std::is_same<CompatibleObjectType, typename BasicJsonType::object_t>::value), int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:358:79,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, const CompatibleObjectType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleObjectType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; typename std::enable_if<is_compatible_object_type<BasicJsonType, CompatibleObjectType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:590:53,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&; <template-parameter-1-1> = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&; U = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/test_utils.o -c /<<PKGBUILDDIR>>/src/cpp/test_utils.cpp
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/catch.hpp:569,
from /<<PKGBUILDDIR>>/src/cpp/run_ataqv_tests.cpp:2:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Catch::SectionEndInfo>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1462:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator<long double>]’,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1472:70:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long double*, std::vector<long double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator<long double>]’,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1483:75:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long double*, std::vector<long double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1568:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1568 | };
| ^
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]’,
inlined from ‘virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)’ at /<<PKGBUILDDIR>>/src/cpp/catch.hpp:6057:43:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]’,
inlined from ‘virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)’ at /<<PKGBUILDDIR>>/src/cpp/catch.hpp:6057:43,
inlined from ‘Catch::Section::~Section()’ at /<<PKGBUILDDIR>>/src/cpp/catch.hpp:7923:53:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/Features.o -c /<<PKGBUILDDIR>>/src/cpp/Features.cpp
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::push_back(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>&&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:5275:33,
inlined from ‘nlohmann::json MetricsCollector::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1588:25:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:62,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:10,
from /<<PKGBUILDDIR>>/src/cpp/Features.hpp:12,
from /<<PKGBUILDDIR>>/src/cpp/Features.cpp:11:
/usr/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >]’:
/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:63:
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferenceFeatureCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >]’,
inlined from ‘ReferenceFeatureCollection* FeatureTree::get_reference_feature_collection(const std::string&)’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:127:32:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/Utils.hpp:6,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:19:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}; _Tp = std::pair<long long unsigned int, std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}; _Tp = std::pair<long long unsigned int, std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair<long long unsigned int, std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘std::vector<std::__cxx11::basic_string<char> > FeatureTree::get_references_by_feature_count()’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:142:46:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, std::__cxx11::basic_string<char> >*, std::vector<std::pair<long long unsigned int, std::__cxx11::basic_string<char> > > >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Feature&}; _Tp = Feature; _Alloc = std::allocator<Feature>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Feature>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Feature; _Alloc = std::allocator<Feature>]’,
inlined from ‘void ReferenceFeatureCollection::add(const Feature&)’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:101:23:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferenceFeatureCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >]’,
inlined from ‘void FeatureTree::add(Feature&)’ at /<<PKGBUILDDIR>>/src/cpp/Features.cpp:122:27:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferenceFeatureCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/HTS.o -c /<<PKGBUILDDIR>>/src/cpp/HTS.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/IO.o -c /<<PKGBUILDDIR>>/src/cpp/IO.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/Metrics.o -c /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/Peaks.o -c /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/Utils.o -c /<<PKGBUILDDIR>>/src/cpp/Utils.cpp
In file included from /usr/include/c++/13/bits/stl_algo.h:61,
from /usr/include/c++/13/algorithm:61,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:7:
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Distance = int; _Tp = Peak; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1792:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1792 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1812 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/Utils.hpp:6,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:19,
from /<<PKGBUILDDIR>>/src/cpp/Features.hpp:12,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.hpp:13,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:13:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Peak&}; _Tp = Peak; _Alloc = std::allocator<Peak>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Peak>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:62,
from /usr/include/boost/system/detail/std_interoperability.hpp:11,
from /usr/include/boost/system/error_code.hpp:963,
from /usr/include/boost/chrono/detail/system.hpp:11,
from /usr/include/boost/chrono/system_clocks.hpp:64,
from /usr/include/boost/chrono/chrono.hpp:13,
from /usr/include/boost/chrono/include.hpp:15,
from /usr/include/boost/chrono.hpp:17,
from /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:11:
/usr/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >]’:
/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:63:
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferencePeakCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >]’,
inlined from ‘ReferencePeakCollection* PeakTree::get_reference_peaks(const std::string&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:121:32:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1792:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1792 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1812 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o build/ataqv build/ataqv.o build/Features.o build/HTS.o build/IO.o build/Metrics.o build/Peaks.o build/Utils.o -Wl,-z,relro -Wl,-z,now -lboost_filesystem -lboost_iostreams -lboost_system -lboost_chrono -lhts -lz -lncurses -lpthread
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1918 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘std::vector<Peak> PeakTree::list_peaks()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:197:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:200:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:200:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘void ReferencePeakCollection::sort()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:105:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18,
inlined from ‘void ReferencePeakCollection::sort()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:105:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘void ReferencePeakCollection::add(const Peak&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:67:20:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = ReferencePeakCollection; _Compare = numeric_string_comparator; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >]’,
inlined from ‘void PeakTree::add(Peak&)’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:110:24:
/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> >, numeric_string_comparator, std::allocator<std::pair<const std::__cxx11::basic_string<char>, ReferencePeakCollection> > >::const_iterator’ changed in GCC 7.1
513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
514 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
515 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Distance = int; _Tp = Peak; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_heap.h:340:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
340 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~~~
/usr/include/c++/13/bits/stl_heap.h:340:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1918 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1910:25,
inlined from ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1926:27:
/usr/include/c++/13/bits/stl_algo.h:1635:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1635 | std::__make_heap(__first, __middle, __comp);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’:
/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_size_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:221:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_size_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:224:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_size_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:224:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Peak; _Alloc = std::allocator<Peak>]’,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_overlapping_hqaa_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:209:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_overlapping_hqaa_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:212:14:
/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1947 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1948 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1949 | __comp);
| ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’,
inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const Peak&, const Peak&)>]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31,
inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<Peak*, vector<Peak> >; _Compare = bool (*)(const Peak&, const Peak&)]’ at /usr/include/c++/13/bits/stl_algo.h:4894:18,
inlined from ‘std::vector<Peak> PeakTree::list_peaks_by_overlapping_hqaa_descending()’ at /<<PKGBUILDDIR>>/src/cpp/Peaks.cpp:212:14:
/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Peak*, std::vector<Peak> >’ changed in GCC 7.1
1864 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/map:62,
from /usr/include/boost/system/detail/std_interoperability.hpp:11,
from /usr/include/boost/system/error_code.hpp:963,
from /usr/include/boost/chrono/detail/system.hpp:11,
from /usr/include/boost/chrono/system_clocks.hpp:64,
from /usr/include/boost/chrono/chrono.hpp:13,
from /usr/include/boost/chrono/include.hpp:15,
from /usr/include/boost/chrono.hpp:17,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:16:
/usr/include/c++/13/bits/stl_tree.h: In function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]’:
/usr/include/c++/13/bits/stl_tree.h:2210:5: note: parameter passing for argument of type ‘std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator’ changed in GCC 7.1
2210 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72,
from /<<PKGBUILDDIR>>/src/cpp/Utils.hpp:6,
from /<<PKGBUILDDIR>>/src/cpp/HTS.hpp:19,
from /<<PKGBUILDDIR>>/src/cpp/Features.hpp:12,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:18:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Feature&}; _Tp = Feature; _Alloc = std::allocator<Feature>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<Feature>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Feature; _Alloc = std::allocator<Feature>]’,
inlined from ‘void MetricsCollector::load_excluded_regions()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:700:39:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Feature*, std::vector<Feature> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<long double>::iterator’ changed in GCC 7.1
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >::iterator’ changed in GCC 7.1
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘void nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::push_back(const nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:5311:33:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’,
inlined from ‘void Metrics::add_alignment(const bam_hdr_t*, const bam1_t*)’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:893:59:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/src/cpp/Metrics.hpp:16,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:21:
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In function ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(std::initializer_list<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:2082:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
2082 | basic_json(std::initializer_list<basic_json> init,
| ^~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In function ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(std::initializer_list<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:2082:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp: In member function ‘nlohmann::json Library::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1380:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1380 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1378:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1378 | };
| ^
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::push_back(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>&&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:5275:33:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_pair.h:61,
from /usr/include/c++/13/tuple:38,
from /usr/include/c++/13/mutex:40,
from /usr/include/c++/13/future:40,
from /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:10:
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In static member function ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1394:22:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = double&; <template-parameter-1-1> = double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = double&; U = double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1493:23:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = const long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = const long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = const long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = const long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = nlohmann::basic_json<>; _Args = {const long double&}]’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:120:21,
inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, std::vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*; bool _TrivialValueTypes = false]’ at /usr/include/c++/13/bits/stl_uninitialized.h:137:32,
inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*]’ at /usr/include/c++/13/bits/stl_uninitialized.h:185:15,
inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, vector<long double> >; _ForwardIterator = nlohmann::basic_json<>*; _Tp = nlohmann::basic_json<>]’ at /usr/include/c++/13/bits/stl_uninitialized.h:373:37,
inlined from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const long double*, std::vector<long double> >; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:1692:33,
inlined from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = __gnu_cxx::__normal_iterator<const long double*, std::vector<long double> >; <template-parameter-2-2> = void; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:708:23,
inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >; _Args = {__gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >, __gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >}; _Tp = std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/new_allocator.h:187:4,
inlined from ‘static T* nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::create(Args&& ...) [with T = std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > >; Args = {__gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >, __gnu_cxx::__normal_iterator<const long double*, std::vector<long double, std::allocator<long double> > >}; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:1634:24,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::array>::construct(BasicJsonType&, const CompatibleArrayType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleArrayType = std::vector<long double>; typename std::enable_if<(! std::is_same<CompatibleArrayType, typename BasicJsonType::array_t>::value), int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:332:77,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, const CompatibleArrayType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleArrayType = std::vector<long double>; typename std::enable_if<(is_compatible_array_type<BasicJsonType, CompatibleArrayType>::value || std::is_same<typename BasicJsonType::array_t, CompatibleArrayType>::value), int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:581:52,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = const std::vector<long double>&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = const std::vector<long double>&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = const std::vector<long double>&; <template-parameter-1-1> = std::vector<long double>; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = const std::vector<long double>&; U = std::vector<long double>; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘constexpr std::pair<_T1, _T2>::pair(const std::pair<_U1, _U2>&) [with _U1 = const std::__cxx11::basic_string<char>; _U2 = std::vector<long double>; typename std::enable_if<(std::_PCC<((! std::is_same<_T1, _U1>::value) || (! std::is_same<_T2, _U2>::value)), _T1, _T2>::_ConstructiblePair<_U1, _U2>() && std::_PCC<((! std::is_same<_T1, _U1>::value) || (! std::is_same<_T2, _U2>::value)), _T1, _T2>::_ImplicitlyConvertiblePair<_U1, _U2>()), bool>::type <anonymous> = true; _T1 = const std::__cxx11::basic_string<char>; _T2 = nlohmann::basic_json<>]’ at /usr/include/c++/13/bits/stl_pair.h:586:22,
inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Tp = std::_Rb_tree_node<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/new_allocator.h:187:4,
inlined from ‘static void std::allocator_traits<std::allocator<_Tp1> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Tp = std::_Rb_tree_node<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/alloc_traits.h:537:17,
inlined from ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_construct_node(_Link_type, _Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:597:32,
inlined from ‘std::_Rb_tree_node<_Val>* std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_create_node(_Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:614:21,
inlined from ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_Auto_node::_Auto_node(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>&, _Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:1637:32,
inlined from ‘std::pair<std::_Rb_tree_iterator<_Val>, bool> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_unique(_Args&& ...) [with _Args = {const std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > >&}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:2434:13,
inlined from ‘std::__enable_if_t<(! std::is_same<_Val, typename std::iterator_traits<_InputIterator>::value_type>::value)> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_range_unique(_InputIterator, _InputIterator) [with _InputIterator = std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::vector<long double> > >; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_tree.h:1112:23,
inlined from ‘std::map<_Key, _Tp, _Compare, _Alloc>::map(_InputIterator, _InputIterator) [with _InputIterator = std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::vector<long double> > >; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::basic_json<>; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > >]’ at /usr/include/c++/13/bits/stl_map.h:287:31,
inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::map<std::__cxx11::basic_string<char>, nlohmann::basic_json<>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > > >; _Args = {std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >, std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >}; _Tp = std::map<std::__cxx11::basic_string<char>, nlohmann::basic_json<>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > > >]’ at /usr/include/c++/13/bits/new_allocator.h:187:4,
inlined from ‘static T* nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::create(Args&& ...) [with T = std::map<std::__cxx11::basic_string<char>, nlohmann::basic_json<>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::basic_json<> > > >; Args = {std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >, std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<long double, std::allocator<long double> > > >}; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:1634:24,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::object>::construct(BasicJsonType&, const CompatibleObjectType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleObjectType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; typename std::enable_if<(! std::is_same<CompatibleObjectType, typename BasicJsonType::object_t>::value), int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:358:79,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, const CompatibleObjectType&) [with BasicJsonType = nlohmann::basic_json<>; CompatibleObjectType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; typename std::enable_if<is_compatible_object_type<BasicJsonType, CompatibleObjectType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:590:53,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&; <template-parameter-1-1> = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >&; U = std::map<std::__cxx11::basic_string<char>, std::vector<long double> >; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In function ‘std::_Require<std::__not_<std::__is_tuple_like<_Tp> >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::value_type& nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::operator=(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2554:13,
inlined from ‘static void nlohmann::detail::external_constructor<nlohmann::detail::value_t::number_float>::construct(BasicJsonType&, typename BasicJsonType::number_float_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15,
inlined from ‘void nlohmann::detail::to_json(BasicJsonType&, FloatType) [with BasicJsonType = nlohmann::basic_json<>; FloatType = long double; typename std::enable_if<std::is_floating_point<FloatType>::value, int>::type <anonymous> = 0]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:545:59,
inlined from ‘decltype ((nlohmann::detail::to_json(j, forward<T>(val)), void())) nlohmann::detail::to_json_fn::call(BasicJsonType&, T&&, nlohmann::detail::priority_tag<1>) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:837:23,
inlined from ‘void nlohmann::detail::to_json_fn::operator()(BasicJsonType&, T&&) const [with BasicJsonType = nlohmann::basic_json<>; T = long double&]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:852:20,
inlined from ‘static void nlohmann::adl_serializer< <template-parameter-1-1>, <template-parameter-1-2> >::to_json(BasicJsonType&, ValueType&&) [with BasicJsonType = nlohmann::basic_json<>; ValueType = long double&; <template-parameter-1-1> = long double; <template-parameter-1-2> = void]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:942:28,
inlined from ‘nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::basic_json(CompatibleType&&) [with CompatibleType = long double&; U = long double; typename std::enable_if<((((! std::is_base_of<std::basic_istream<char>, U>::value) && (! std::is_same<U, nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer> >::value)) && (! nlohmann::detail::is_basic_json_nested_type<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value)) && nlohmann::detail::has_to_json<nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>, U>::value), int>::type <anonymous> = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:2009:35,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1:
/usr/include/c++/13/bits/move.h:198:7: warning: ‘<unnamed>.nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized]
198 | __a = _GLIBCXX_MOVE(__b);
| ^~~
/<<PKGBUILDDIR>>/src/cpp/json.hpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/json.hpp:277:15: note: ‘<anonymous>’ declared here
277 | j = BasicJsonType{};
| ~~^~~~~~~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1462:28:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator<long double>]’,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1472:70:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long double*, std::vector<long double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator<long double>]’,
inlined from ‘nlohmann::json Metrics::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1483:75:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long double*, std::vector<long double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp: In member function ‘nlohmann::json Metrics::to_json()’:
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1570:1: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1570 | }
| ^
/<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1568:5: note: parameter passing for argument of type ‘std::initializer_list<nlohmann::basic_json<> >’ changed in GCC 7.1
1568 | };
| ^
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer>}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator<nlohmann::basic_json<> >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>::push_back(nlohmann::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer>&&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at /<<PKGBUILDDIR>>/src/cpp/json.hpp:5275:33,
inlined from ‘nlohmann::json MetricsCollector::to_json()’ at /<<PKGBUILDDIR>>/src/cpp/Metrics.cpp:1588:25:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<nlohmann::basic_json<>*, std::vector<nlohmann::basic_json<>, std::allocator<nlohmann::basic_json<> > > >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++11 -pthread -O3 -g -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Wwrite-strings -Wstrict-overflow -fno-strict-aliasing -fPIC -I/<<PKGBUILDDIR>>/src/cpp -D LINUX -o testing/run_ataqv_tests testing/run_ataqv_tests.o testing/test_features.o testing/test_hts.o testing/test_io.o testing/test_metrics.o testing/test_peaks.o testing/test_utils.o testing/Features.o testing/HTS.o testing/IO.o testing/Metrics.o testing/Peaks.o testing/Utils.o -Wl,-z,relro -Wl,-z,now -lboost_filesystem -lboost_iostreams -lboost_system -lboost_chrono -lhts -lz -lncurses -lpthread
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
[E::sam_format1_append] Corrupted aux data for read SRR891268.122333488
Reading human autosomal references from autosomal_references.gz.
Autosomal references for human:
I
II
III
Reading human autosomal references from autosomal_references.gz.
Autosomal references for human:
I
II
III
Reading human autosomal references from autosomal_references.gz.
Autosomal references for human:
I
II
III
Read 411 excluded regions from exclude.dac.bed.gz.
Read 1649 excluded regions from exclude.duke.bed.gz.
Loading TSS file 'hg19.tss.refseq.bed.gz'.
Excluding TSS [chr11 10530722 10530723 MTRNR2L8 0 -] which overlaps excluded region [chr11 10529403 10531969 Low_mappability_island 1000 .]
Excluding TSS [chr12 118573688 118573689 PEBP1 0 +] which overlaps excluded region [chr12 118573638 118573695 LSU-rRNA_Hsa 1000 .]
Excluding TSS [chr14 105196180 105196181 ADSSL1 0 +] which overlaps excluded region [chr14 105195912 105196275 TAR1 1000 .]
Excluding TSS [chr17 22022436 22022437 MTRNR2L1 0 +] which overlaps excluded region [chr17 22018524 22032049 Low_mappability_island 1000 .]
Excluding TSS [chr20 55934877 55934878 MTRNR2L3 0 -] which overlaps excluded region [chr20 55932703 55936114 chrM 1000 .]
Excluding TSS [chr5 79946853 79946854 MTRNR2L2 0 -] which overlaps excluded region [chr5 79945807 79948223 Low_mappability_island 1000 .]
Excluding TSS [chr6 62284007 62284008 MTRNR2L9 0 +] which overlaps excluded region [chr6 62283966 62284581 Low_mappability_island 1000 .]
Excluding TSS [chr7 57207570 57207571 ZNF479 0 -] which overlaps excluded region [chr7 57205319 57210318 BSR/Beta 1000 .]
Excluding TSS [chr7 63688851 63688852 ZNF679 0 +] which overlaps excluded region [chr7 63686197 63693336 BSR/Beta 1000 .]
Excluding TSS [chr7 142374130 142374131 MTRNR2L6 0 +] which overlaps excluded region [chr7 142372972 142375638 Low_mappability_island 1000 .]
Excluding TSS [chrX 55208943 55208944 MTRNR2L10 0 -] which overlaps excluded region [chrX 55204685 55210460 chrM 1000 .]
Excluding TSS [chrY 25130409 25130410 BPY2B 0 +] which overlaps excluded region [chrY 25122419 25160800 BSR/Beta 1000 .]
Excluding TSS [chrY 26764150 26764151 BPY2B 0 +] which overlaps excluded region [chrY 26756160 26794538 BSR/Beta 1000 .]
Excluding TSS [chrY 27198250 27198251 BPY2B 0 -] which overlaps excluded region [chrY 27167859 27206241 BSR/Beta 1000 .]
chr1 feature count: 2687
chr2 feature count: 1715
chr3 feature count: 1490
chr4 feature count: 1004
chr5 feature count: 1132
chr6 feature count: 1368
chr7 feature count: 1169
chr8 feature count: 913
chr9 feature count: 1025
chr10 feature count: 1039
chr11 feature count: 1642
chr12 feature count: 1350
chr13 feature count: 433
chr14 feature count: 785
chr15 feature count: 812
chr16 feature count: 1106
chr17 feature count: 1528
chr18 feature count: 398
chr19 feature count: 1785
chr20 feature count: 694
chr21 feature count: 321
chr22 feature count: 593
Loaded 24989 TSS in 2.30117 seconds. (10859.3 TSS/second).
Collecting metrics from test.bam.
Logging problematic reads to SRR891275.problems.
Loading peaks for read group SRR891275 from test.peaks.gz.
Excluding peak [chr1 569780 570073 both.broad_peak_1] which overlaps excluded region [chr1 564449 570371 High_Mappability_island 1000 .]
Excluding peak [chr1 5727305 5727512 both.broad_peak_97] which overlaps excluded region [chr1 5725866 5736651 Low_mappability_island 1000 .]
Excluding peak [chr1 16840415 16841121 both.broad_peak_297] which overlaps excluded region [chr1 16839923 16841396 Low_mappability_island 1000 .]
Excluding peak [chr1 121354253 121354849 both.broad_peak_1896] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000 .]
Excluding peak [chr1 121478396 121478755 both.broad_peak_1897] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000 .]
Excluding peak [chr1 121484326 121485516 both.broad_peak_1898] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000 .]
Excluding peak [chr1 142538265 142538603 both.broad_peak_1899] which overlaps excluded region [chr1 142535434 142543081 Satellite_repeat 1000 .]
Excluding peak [chr1 148928074 148928756 both.broad_peak_1971] which overlaps excluded region [chr1 148927799 148928362 TAR1 1000 .]
Excluding peak [chr10 38804202 38804431 both.broad_peak_4296] which overlaps excluded region [chr10 38772277 38819357 Satellite_repeat 1000 .]
Excluding peak [chr10 38817221 38818020 both.broad_peak_4297] which overlaps excluded region [chr10 38772277 38819357 Satellite_repeat 1000 .]
Excluding peak [chr10 38872037 38872278 both.broad_peak_4298] which overlaps excluded region [chr10 38868892 38889025 Satellite_repeat 1000 .]
Excluding peak [chr10 42355450 42355650 both.broad_peak_4299] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42358135 42358433 both.broad_peak_4300] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42364634 42365245 both.broad_peak_4301] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42379790 42380383 both.broad_peak_4302] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42384574 42385679 both.broad_peak_4303] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42392602 42392861 both.broad_peak_4304] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42396775 42396995 both.broad_peak_4305] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42398498 42400769 both.broad_peak_4306] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42404317 42404537 both.broad_peak_4307] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42408166 42408438 both.broad_peak_4308] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42442445 42442676 both.broad_peak_4309] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42527244 42528189 both.broad_peak_4310] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42529217 42530048 both.broad_peak_4311] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42534598 42534872 both.broad_peak_4312] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42596780 42597198 both.broad_peak_4313] which overlaps excluded region [chr10 42596676 42602082 Satellite_repeat 1000 .]
Excluding peak [chr10 42599471 42600289 both.broad_peak_4314] which overlaps excluded region [chr10 42596676 42602082 Satellite_repeat 1000 .]
Excluding peak [chr10 42817448 42818278 both.broad_peak_4315] which overlaps excluded region [chr10 42790522 42818398 Satellite_repeat 1000 .]
Excluding peak [chr11 189746 190314 both.broad_peak_5511] which overlaps excluded region [chr11 189419 190691 TAR1 1000 .]
Excluding peak [chr11 50731852 50732074 both.broad_peak_6138] which overlaps excluded region [chr11 50318471 50784078 centromeric_repeat 1000 .]
Excluding peak [chr11 51572059 51572261 both.broad_peak_6139] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000 .]
Excluding peak [chr11 51579362 51580694 both.broad_peak_6140] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000 .]
Excluding peak [chr11 51591018 51591457 both.broad_peak_6141] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000 .]
Excluding peak [chr11 55006615 55007430 both.broad_peak_6142] which overlaps excluded region [chr11 54694046 55027975 centromeric_repeat 1000 .]
Excluding peak [chr11 73221686 73221937 both.broad_peak_6590] which overlaps excluded region [chr11 73221660 73221946 Low_mappability_island 1000 .]
Excluding peak [chr12 94193 94658 both.broad_peak_7396] which overlaps excluded region [chr12 94147 95158 TAR1 1000 .]
Excluding peak [chr12 34841382 34841617 both.broad_peak_7957] which overlaps excluded region [chr12 34432130 34857010 centromeric_repeat 1000 .]
Excluding peak [chr12 34846246 34846543 both.broad_peak_7958] which overlaps excluded region [chr12 34432130 34857010 centromeric_repeat 1000 .]
Excluding peak [chr12 38008155 38008894 both.broad_peak_7959] which overlaps excluded region [chr12 37989447 38441828 centromeric_repeat 1000 .]
Excluding peak [chr12 38023173 38023373 both.broad_peak_7960] which overlaps excluded region [chr12 37989447 38441828 centromeric_repeat 1000 .]
Excluding peak [chr12 118573678 118574095 both.broad_peak_9235] which overlaps excluded region [chr12 118573638 118573695 LSU-rRNA_Hsa 1000 .]
Excluding peak [chr12 127650467 127651165 both.broad_peak_9421] which overlaps excluded region [chr12 127650407 127651075 LSU-rRNA_Hsa 1000 .]
Excluding peak [chr14 32953483 32953821 both.broad_peak_10712] which overlaps excluded region [chr14 32953263 32954381 Low_mappability_island 1000 .]
Excluding peak [chr15 80444564 80445859 both.broad_peak_12630] which overlaps excluded region [chr15 80445513 80445569 (GAGTG)n 1000 .]
Excluding peak [chr16 60436 61192 both.broad_peak_12924] which overlaps excluded region [chr16 60058 61142 TAR1 1000 .]
Excluding peak [chr16 33866265 33866524 both.broad_peak_13513] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000 .]
Excluding peak [chr16 33918664 33919304 both.broad_peak_13514] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000 .]
Excluding peak [chr16 34009313 34009561 both.broad_peak_13515] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000 .]
Excluding peak [chr16 46386270 46386795 both.broad_peak_13516] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46391235 46392140 both.broad_peak_13517] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46403548 46403849 both.broad_peak_13518] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46416804 46417405 both.broad_peak_13519] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46427429 46427991 both.broad_peak_13520] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr17 22020593 22020916 both.broad_peak_14569] which overlaps excluded region [chr17 22018524 22032049 Low_mappability_island 1000 .]
Excluding peak [chr17 22252084 22253296 both.broad_peak_14570] which overlaps excluded region [chr17 22221073 22263006 centromeric_repeat 1000 .]
Excluding peak [chr17 22261278 22261740 both.broad_peak_14571] which overlaps excluded region [chr17 22221073 22263006 centromeric_repeat 1000 .]
Excluding peak [chr17 25264883 25265249 both.broad_peak_14572] which overlaps excluded region [chr17 25263010 25268059 Satellite_repeat 1000 .]
Excluding peak [chr17 41381728 41382265 both.broad_peak_14950] which overlaps excluded region [chr17 41381502 41382591 High_Mappability_island 1000 .]
Excluding peak [chr17 41465631 41466936 both.broad_peak_14957] which overlaps excluded region [chr17 41465562 41467288 High_Mappability_island 1000 .]
Excluding peak [chr17 51183057 51183341 both.broad_peak_15172] which overlaps excluded region [chr17 51183038 51183763 Low_mappability_island 1000 .]
Excluding peak [chr17 58602907 58603721 both.broad_peak_15290] which overlaps excluded region [chr17 58603715 58603738 (GAGTG)n 1000 .]
Excluding peak [chr18 111564 112042 both.broad_peak_15816] which overlaps excluded region [chr18 105658 112233 Satellite_repeat 1000 .]
Excluding peak [chr18 18512827 18513193 both.broad_peak_16011] which overlaps excluded region [chr18 18510894 18520356 centromeric_repeat 1000 .]
Excluding peak [chr18 18516045 18520399 both.broad_peak_16012] which overlaps excluded region [chr18 18510894 18520356 centromeric_repeat 1000 .]
Excluding peak [chr19 21776802 21777550 both.broad_peak_17342] which overlaps excluded region [chr19 21776132 21780768 BSR/Beta 1000 .]
Excluding peak [chr19 24169382 24170027 both.broad_peak_17364] which overlaps excluded region [chr19 24156856 24171961 BSR/Beta 1000 .]
Excluding peak [chr19 24474565 24474765 both.broad_peak_17369] which overlaps excluded region [chr19 24385474 24633168 centromeric_repeat 1000 .]
Excluding peak [chr19 24526069 24526320 both.broad_peak_17370] which overlaps excluded region [chr19 24385474 24633168 centromeric_repeat 1000 .]
Excluding peak [chr19 27731880 27733339 both.broad_peak_17371] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 27738359 27738668 both.broad_peak_17372] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 27756701 27756901 both.broad_peak_17373] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 27801311 27801531 both.broad_peak_17374] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 37784325 37784692 both.broad_peak_17536] which overlaps excluded region [chr19 37759473 37797722 centromeric_repeat 1000 .]
Excluding peak [chr19 42069917 42070450 both.broad_peak_17680] which overlaps excluded region [chr19 42069989 42071891 LSU-rRNA_Hsa 1000 .]
Excluding peak [chr2 89848588 89848836 both.broad_peak_19338] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000 .]
Excluding peak [chr2 89872032 89872646 both.broad_peak_19339] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000 .]
Excluding peak [chr2 89878336 89879257 both.broad_peak_19340] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000 .]
Excluding peak [chr2 90449580 90449808 both.broad_peak_19342] which overlaps excluded region [chr2 90443001 90545431 Low_mappability_island 1000 .]
Excluding peak [chr2 91847848 91848177 both.broad_peak_19344] which overlaps excluded region [chr2 91847957 91848503 TAR1 1000 .]
Excluding peak [chr2 92272876 92273767 both.broad_peak_19345] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92281197 92281779 both.broad_peak_19346] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92284237 92284462 both.broad_peak_19347] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92290435 92291262 both.broad_peak_19348] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92296588 92297023 both.broad_peak_19349] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92305535 92305892 both.broad_peak_19350] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92317234 92317870 both.broad_peak_19351] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 114361072 114362020 both.broad_peak_19697] which overlaps excluded region [chr2 114361054 114362417 TAR1 1000 .]
Excluding peak [chr2 132559385 132560425 both.broad_peak_19833] which overlaps excluded region [chr2 132560214 132560696 TAR1 1000 .]
Excluding peak [chr2 132996509 132996755 both.broad_peak_19834] which overlaps excluded region [chr2 132994855 133007983 ALR/Alpha 1000 .]
Excluding peak [chr2 149639210 149639450 both.broad_peak_19986] which overlaps excluded region [chr2 149639207 149639515 Low_mappability_island 1000 .]
Excluding peak [chr2 162135291 162136055 both.broad_peak_20150] which overlaps excluded region [chr2 162135000 162139241 Low_mappability_island 1000 .]
Excluding peak [chr20 26269111 26270030 both.broad_peak_21666] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26278258 26278484 both.broad_peak_21667] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26289332 26290609 both.broad_peak_21668] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26305634 26305887 both.broad_peak_21669] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26317322 26318676 both.broad_peak_21670] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 29512475 29512675 both.broad_peak_21671] which overlaps excluded region [chr20 29511127 29514978 ALR/Alpha 1000 .]
Excluding peak [chr20 29517798 29518922 both.broad_peak_21672] which overlaps excluded region [chr20 29517710 29521147 centromeric_repeat 1000 .]
Excluding peak [chr20 29813756 29813985 both.broad_peak_21678] which overlaps excluded region [chr20 29803876 29833334 centromeric_repeat 1000 .]
Excluding peak [chr20 29831826 29832026 both.broad_peak_21679] which overlaps excluded region [chr20 29803876 29833334 centromeric_repeat 1000 .]
Excluding peak [chr20 62917250 62917592 both.broad_peak_22240] which overlaps excluded region [chr20 62916702 62918053 telomeric_repeat 1000 .]
Excluding peak [chr21 9825749 9827187 both.broad_peak_22241] which overlaps excluded region [chr21 9825451 9827612 High_Mappability_island 1000 .]
Excluding peak [chr21 10773372 10773572 both.broad_peak_22242] which overlaps excluded region [chr21 10697886 10860890 centromeric_repeat 1000 .]
Excluding peak [chr21 11186125 11187338 both.broad_peak_22243] which overlaps excluded region [chr21 11186054 11188131 Satellite_repeat 1000 .]
Excluding peak [chr22 18878342 18878659 both.broad_peak_22759] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000 .]
Excluding peak [chr22 18879876 18880128 both.broad_peak_22760] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000 .]
Excluding peak [chr22 18883583 18883799 both.broad_peak_22761] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000 .]
Excluding peak [chr22 22652231 22653042 both.broad_peak_22847] which overlaps excluded region [chr22 22652105 22652554 TAR1 1000 .]
Excluding peak [chr3 25508907 25509133 both.broad_peak_23723] which overlaps excluded region [chr3 25508897 25509131 Low_mappability_island 1000 .]
Excluding peak [chr3 73159761 73160669 both.broad_peak_24512] which overlaps excluded region [chr3 73159606 73161131 snRNA 1000 .]
Excluding peak [chr3 96336804 96337073 both.broad_peak_24578] which overlaps excluded region [chr3 96335934 96337436 Low_mappability_island 1000 .]
Excluding peak [chr3 196625608 196625808 both.broad_peak_25903] which overlaps excluded region [chr3 196625514 196625860 Satellite_repeat 1000 .]
Excluding peak [chr4 49094768 49094968 both.broad_peak_26437] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49107449 49107766 both.broad_peak_26438] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49122928 49123231 both.broad_peak_26439] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49151102 49151911 both.broad_peak_26440] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49645060 49645303 both.broad_peak_26441] which overlaps excluded region [chr4 49488472 49662085 centromeric_repeat 1000 .]
Excluding peak [chr4 49659456 49659760 both.broad_peak_26442] which overlaps excluded region [chr4 49488472 49662085 centromeric_repeat 1000 .]
Excluding peak [chr4 56194226 56194485 both.broad_peak_26481] which overlaps excluded region [chr4 56194229 56194584 Low_mappability_island 1000 .]
Excluding peak [chr4 68264592 68266730 both.broad_peak_26530] which overlaps excluded region [chr4 68264186 68266830 centromeric_repeat 1000 .]
Excluding peak [chr4 191032545 191032745 both.broad_peak_27751] which overlaps excluded region [chr4 191026302 191044344 telomeric_repeat 1000 .]
Excluding peak [chr5 46364115 46364315 both.broad_peak_28116] which overlaps excluded region [chr5 45908253 46411114 centromeric_repeat 1000 .]
Excluding peak [chr5 49450550 49450756 both.broad_peak_28117] which overlaps excluded region [chr5 49405493 49554574 centromeric_repeat 1000 .]
Excluding peak [chr5 49547478 49547699 both.broad_peak_28118] which overlaps excluded region [chr5 49405493 49554574 centromeric_repeat 1000 .]
Excluding peak [chr5 134259765 134260404 both.broad_peak_29117] which overlaps excluded region [chr5 134258949 134264271 Low_mappability_island 1000 .]
Excluding peak [chr5 134262625 134262877 both.broad_peak_29118] which overlaps excluded region [chr5 134258949 134264271 Low_mappability_island 1000 .]
Excluding peak [chr6 58776533 58779369 both.broad_peak_30874] which overlaps excluded region [chr6 58745955 58780547 centromeric_repeat 1000 .]
Excluding peak [chr7 43878412 43878832 both.broad_peak_32927] which overlaps excluded region [chr7 43878355 43878530 TAR1 1000 .]
Excluding peak [chr7 45291476 45291676 both.broad_peak_32976] which overlaps excluded region [chr7 45291517 45291740 Low_mappability_island 1000 .]
Excluding peak [chr7 57549361 57549585 both.broad_peak_33054] which overlaps excluded region [chr7 57544726 57556913 Satellite_repeat 1000 .]
Excluding peak [chr7 57957789 57957996 both.broad_peak_33055] which overlaps excluded region [chr7 57939184 58055539 centromeric_repeat 1000 .]
Excluding peak [chr7 61968705 61969761 both.broad_peak_33056] which overlaps excluded region [chr7 61054285 62454680 centromeric_repeat 1000 .]
Excluding peak [chr7 61986136 61986336 both.broad_peak_33057] which overlaps excluded region [chr7 61054285 62454680 centromeric_repeat 1000 .]
Excluding peak [chr7 64099785 64100002 both.broad_peak_33067] which overlaps excluded region [chr7 64090864 64105357 BSR/Beta 1000 .]
Excluding peak [chr7 64100838 64101105 both.broad_peak_33068] which overlaps excluded region [chr7 64090864 64105357 BSR/Beta 1000 .]
Excluding peak [chr7 100550706 100551292 both.broad_peak_33481] which overlaps excluded region [chr7 100550640 100551321 Low_mappability_island 1000 .]
Excluding peak [chr8 43092778 43097038 both.broad_peak_34830] which overlaps excluded region [chr8 43092737 43097573 Satellite_repeat 1000 .]
Excluding peak [chr8 43779474 43779699 both.broad_peak_34831] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 43794100 43794746 both.broad_peak_34832] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 43820539 43820739 both.broad_peak_34833] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 43821992 43822192 both.broad_peak_34834] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 46845309 46845549 both.broad_peak_34835] which overlaps excluded region [chr8 46838215 47457541 centromeric_repeat 1000 .]
Excluding peak [chr8 46852362 46852861 both.broad_peak_34836] which overlaps excluded region [chr8 46838215 47457541 centromeric_repeat 1000 .]
Excluding peak [chr8 100507997 100508253 both.broad_peak_35355] which overlaps excluded region [chr8 100508010 100508287 Low_mappability_island 1000 .]
Excluding peak [chr9 45356920 45357350 both.broad_peak_36413] which overlaps excluded region [chr9 45355954 45357644 telomeric_repeat 1000 .]
Excluding peak [chr9 45439723 45439970 both.broad_peak_36414] which overlaps excluded region [chr9 45435109 45443517 centromeric_repeat 1000 .]
Excluding peak [chr9 45441747 45442443 both.broad_peak_36415] which overlaps excluded region [chr9 45435109 45443517 centromeric_repeat 1000 .]
Excluding peak [chr9 66494045 66494608 both.broad_peak_36419] which overlaps excluded region [chr9 66494170 66494805 TAR1 1000 .]
Excluding peak [chr9 66824178 66824684 both.broad_peak_36421] which overlaps excluded region [chr9 66767710 66864329 centromeric_repeat 1000 .]
Excluding peak [chr9 66833083 66833633 both.broad_peak_36422] which overlaps excluded region [chr9 66767710 66864329 centromeric_repeat 1000 .]
Excluding peak [chr9 67339988 67340844 both.broad_peak_36425] which overlaps excluded region [chr9 67340080 67340661 TAR1 1000 .]
Excluding peak [chr9 68377361 68377574 both.broad_peak_36426] which overlaps excluded region [chr9 68376841 68377466 TAR1 1000 .]
Excluding peak [chr9 68412991 68414393 both.broad_peak_36427] which overlaps excluded region [chr9 68410775 68435115 Low_mappability_island 1000 .]
Excluding peak [chr9 70648541 70648768 both.broad_peak_36436] which overlaps excluded region [chr9 70648394 70648886 TAR1 1000 .]
chr1 peak count: 3667
chr2 peak count: 3154
chr3 peak count: 2528
chr4 peak count: 1814
chr5 peak count: 2042
chr6 peak count: 2483
chr7 peak count: 1999
chr8 peak count: 1647
chr9 peak count: 1475
chr10 peak count: 1815
chr11 peak count: 1878
chr12 peak count: 2078
chr13 peak count: 1026
chr14 peak count: 1275
chr15 peak count: 1140
chr16 peak count: 1211
chr17 peak count: 1664
chr18 peak count: 772
chr19 peak count: 1595
chr20 peak count: 864
chr21 peak count: 487
chr22 peak count: 662
Loaded 37276 peaks in 19.1036 seconds. (1951.26 peaks/second).
Logging problematic reads to SRR891278.problems.
Loading peaks for read group SRR891278 from test.peaks.gz.
Excluding peak [chr1 569780 570073 both.broad_peak_1] which overlaps excluded region [chr1 564449 570371 High_Mappability_island 1000 .]
Excluding peak [chr1 5727305 5727512 both.broad_peak_97] which overlaps excluded region [chr1 5725866 5736651 Low_mappability_island 1000 .]
Excluding peak [chr1 16840415 16841121 both.broad_peak_297] which overlaps excluded region [chr1 16839923 16841396 Low_mappability_island 1000 .]
Excluding peak [chr1 121354253 121354849 both.broad_peak_1896] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000 .]
Excluding peak [chr1 121478396 121478755 both.broad_peak_1897] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000 .]
Excluding peak [chr1 121484326 121485516 both.broad_peak_1898] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000 .]
Excluding peak [chr1 142538265 142538603 both.broad_peak_1899] which overlaps excluded region [chr1 142535434 142543081 Satellite_repeat 1000 .]
Excluding peak [chr1 148928074 148928756 both.broad_peak_1971] which overlaps excluded region [chr1 148927799 148928362 TAR1 1000 .]
Excluding peak [chr10 38804202 38804431 both.broad_peak_4296] which overlaps excluded region [chr10 38772277 38819357 Satellite_repeat 1000 .]
Excluding peak [chr10 38817221 38818020 both.broad_peak_4297] which overlaps excluded region [chr10 38772277 38819357 Satellite_repeat 1000 .]
Excluding peak [chr10 38872037 38872278 both.broad_peak_4298] which overlaps excluded region [chr10 38868892 38889025 Satellite_repeat 1000 .]
Excluding peak [chr10 42355450 42355650 both.broad_peak_4299] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42358135 42358433 both.broad_peak_4300] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42364634 42365245 both.broad_peak_4301] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42379790 42380383 both.broad_peak_4302] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42384574 42385679 both.broad_peak_4303] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42392602 42392861 both.broad_peak_4304] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42396775 42396995 both.broad_peak_4305] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42398498 42400769 both.broad_peak_4306] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42404317 42404537 both.broad_peak_4307] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42408166 42408438 both.broad_peak_4308] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42442445 42442676 both.broad_peak_4309] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42527244 42528189 both.broad_peak_4310] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42529217 42530048 both.broad_peak_4311] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42534598 42534872 both.broad_peak_4312] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000 .]
Excluding peak [chr10 42596780 42597198 both.broad_peak_4313] which overlaps excluded region [chr10 42596676 42602082 Satellite_repeat 1000 .]
Excluding peak [chr10 42599471 42600289 both.broad_peak_4314] which overlaps excluded region [chr10 42596676 42602082 Satellite_repeat 1000 .]
Excluding peak [chr10 42817448 42818278 both.broad_peak_4315] which overlaps excluded region [chr10 42790522 42818398 Satellite_repeat 1000 .]
Excluding peak [chr11 189746 190314 both.broad_peak_5511] which overlaps excluded region [chr11 189419 190691 TAR1 1000 .]
Excluding peak [chr11 50731852 50732074 both.broad_peak_6138] which overlaps excluded region [chr11 50318471 50784078 centromeric_repeat 1000 .]
Excluding peak [chr11 51572059 51572261 both.broad_peak_6139] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000 .]
Excluding peak [chr11 51579362 51580694 both.broad_peak_6140] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000 .]
Excluding peak [chr11 51591018 51591457 both.broad_peak_6141] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000 .]
Excluding peak [chr11 55006615 55007430 both.broad_peak_6142] which overlaps excluded region [chr11 54694046 55027975 centromeric_repeat 1000 .]
Excluding peak [chr11 73221686 73221937 both.broad_peak_6590] which overlaps excluded region [chr11 73221660 73221946 Low_mappability_island 1000 .]
Excluding peak [chr12 94193 94658 both.broad_peak_7396] which overlaps excluded region [chr12 94147 95158 TAR1 1000 .]
Excluding peak [chr12 34841382 34841617 both.broad_peak_7957] which overlaps excluded region [chr12 34432130 34857010 centromeric_repeat 1000 .]
Excluding peak [chr12 34846246 34846543 both.broad_peak_7958] which overlaps excluded region [chr12 34432130 34857010 centromeric_repeat 1000 .]
Excluding peak [chr12 38008155 38008894 both.broad_peak_7959] which overlaps excluded region [chr12 37989447 38441828 centromeric_repeat 1000 .]
Excluding peak [chr12 38023173 38023373 both.broad_peak_7960] which overlaps excluded region [chr12 37989447 38441828 centromeric_repeat 1000 .]
Excluding peak [chr12 118573678 118574095 both.broad_peak_9235] which overlaps excluded region [chr12 118573638 118573695 LSU-rRNA_Hsa 1000 .]
Excluding peak [chr12 127650467 127651165 both.broad_peak_9421] which overlaps excluded region [chr12 127650407 127651075 LSU-rRNA_Hsa 1000 .]
Excluding peak [chr14 32953483 32953821 both.broad_peak_10712] which overlaps excluded region [chr14 32953263 32954381 Low_mappability_island 1000 .]
Excluding peak [chr15 80444564 80445859 both.broad_peak_12630] which overlaps excluded region [chr15 80445513 80445569 (GAGTG)n 1000 .]
Excluding peak [chr16 60436 61192 both.broad_peak_12924] which overlaps excluded region [chr16 60058 61142 TAR1 1000 .]
Excluding peak [chr16 33866265 33866524 both.broad_peak_13513] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000 .]
Excluding peak [chr16 33918664 33919304 both.broad_peak_13514] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000 .]
Excluding peak [chr16 34009313 34009561 both.broad_peak_13515] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000 .]
Excluding peak [chr16 46386270 46386795 both.broad_peak_13516] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46391235 46392140 both.broad_peak_13517] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46403548 46403849 both.broad_peak_13518] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46416804 46417405 both.broad_peak_13519] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr16 46427429 46427991 both.broad_peak_13520] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000 .]
Excluding peak [chr17 22020593 22020916 both.broad_peak_14569] which overlaps excluded region [chr17 22018524 22032049 Low_mappability_island 1000 .]
Excluding peak [chr17 22252084 22253296 both.broad_peak_14570] which overlaps excluded region [chr17 22221073 22263006 centromeric_repeat 1000 .]
Excluding peak [chr17 22261278 22261740 both.broad_peak_14571] which overlaps excluded region [chr17 22221073 22263006 centromeric_repeat 1000 .]
Excluding peak [chr17 25264883 25265249 both.broad_peak_14572] which overlaps excluded region [chr17 25263010 25268059 Satellite_repeat 1000 .]
Excluding peak [chr17 41381728 41382265 both.broad_peak_14950] which overlaps excluded region [chr17 41381502 41382591 High_Mappability_island 1000 .]
Excluding peak [chr17 41465631 41466936 both.broad_peak_14957] which overlaps excluded region [chr17 41465562 41467288 High_Mappability_island 1000 .]
Excluding peak [chr17 51183057 51183341 both.broad_peak_15172] which overlaps excluded region [chr17 51183038 51183763 Low_mappability_island 1000 .]
Excluding peak [chr17 58602907 58603721 both.broad_peak_15290] which overlaps excluded region [chr17 58603715 58603738 (GAGTG)n 1000 .]
Excluding peak [chr18 111564 112042 both.broad_peak_15816] which overlaps excluded region [chr18 105658 112233 Satellite_repeat 1000 .]
Excluding peak [chr18 18512827 18513193 both.broad_peak_16011] which overlaps excluded region [chr18 18510894 18520356 centromeric_repeat 1000 .]
Excluding peak [chr18 18516045 18520399 both.broad_peak_16012] which overlaps excluded region [chr18 18510894 18520356 centromeric_repeat 1000 .]
Excluding peak [chr19 21776802 21777550 both.broad_peak_17342] which overlaps excluded region [chr19 21776132 21780768 BSR/Beta 1000 .]
Excluding peak [chr19 24169382 24170027 both.broad_peak_17364] which overlaps excluded region [chr19 24156856 24171961 BSR/Beta 1000 .]
Excluding peak [chr19 24474565 24474765 both.broad_peak_17369] which overlaps excluded region [chr19 24385474 24633168 centromeric_repeat 1000 .]
Excluding peak [chr19 24526069 24526320 both.broad_peak_17370] which overlaps excluded region [chr19 24385474 24633168 centromeric_repeat 1000 .]
Excluding peak [chr19 27731880 27733339 both.broad_peak_17371] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 27738359 27738668 both.broad_peak_17372] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 27756701 27756901 both.broad_peak_17373] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 27801311 27801531 both.broad_peak_17374] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000 .]
Excluding peak [chr19 37784325 37784692 both.broad_peak_17536] which overlaps excluded region [chr19 37759473 37797722 centromeric_repeat 1000 .]
Excluding peak [chr19 42069917 42070450 both.broad_peak_17680] which overlaps excluded region [chr19 42069989 42071891 LSU-rRNA_Hsa 1000 .]
Excluding peak [chr2 89848588 89848836 both.broad_peak_19338] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000 .]
Excluding peak [chr2 89872032 89872646 both.broad_peak_19339] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000 .]
Excluding peak [chr2 89878336 89879257 both.broad_peak_19340] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000 .]
Excluding peak [chr2 90449580 90449808 both.broad_peak_19342] which overlaps excluded region [chr2 90443001 90545431 Low_mappability_island 1000 .]
Excluding peak [chr2 91847848 91848177 both.broad_peak_19344] which overlaps excluded region [chr2 91847957 91848503 TAR1 1000 .]
Excluding peak [chr2 92272876 92273767 both.broad_peak_19345] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92281197 92281779 both.broad_peak_19346] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92284237 92284462 both.broad_peak_19347] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92290435 92291262 both.broad_peak_19348] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92296588 92297023 both.broad_peak_19349] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92305535 92305892 both.broad_peak_19350] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 92317234 92317870 both.broad_peak_19351] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000 .]
Excluding peak [chr2 114361072 114362020 both.broad_peak_19697] which overlaps excluded region [chr2 114361054 114362417 TAR1 1000 .]
Excluding peak [chr2 132559385 132560425 both.broad_peak_19833] which overlaps excluded region [chr2 132560214 132560696 TAR1 1000 .]
Excluding peak [chr2 132996509 132996755 both.broad_peak_19834] which overlaps excluded region [chr2 132994855 133007983 ALR/Alpha 1000 .]
Excluding peak [chr2 149639210 149639450 both.broad_peak_19986] which overlaps excluded region [chr2 149639207 149639515 Low_mappability_island 1000 .]
Excluding peak [chr2 162135291 162136055 both.broad_peak_20150] which overlaps excluded region [chr2 162135000 162139241 Low_mappability_island 1000 .]
Excluding peak [chr20 26269111 26270030 both.broad_peak_21666] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26278258 26278484 both.broad_peak_21667] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26289332 26290609 both.broad_peak_21668] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26305634 26305887 both.broad_peak_21669] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 26317322 26318676 both.broad_peak_21670] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000 .]
Excluding peak [chr20 29512475 29512675 both.broad_peak_21671] which overlaps excluded region [chr20 29511127 29514978 ALR/Alpha 1000 .]
Excluding peak [chr20 29517798 29518922 both.broad_peak_21672] which overlaps excluded region [chr20 29517710 29521147 centromeric_repeat 1000 .]
Excluding peak [chr20 29813756 29813985 both.broad_peak_21678] which overlaps excluded region [chr20 29803876 29833334 centromeric_repeat 1000 .]
Excluding peak [chr20 29831826 29832026 both.broad_peak_21679] which overlaps excluded region [chr20 29803876 29833334 centromeric_repeat 1000 .]
Excluding peak [chr20 62917250 62917592 both.broad_peak_22240] which overlaps excluded region [chr20 62916702 62918053 telomeric_repeat 1000 .]
Excluding peak [chr21 9825749 9827187 both.broad_peak_22241] which overlaps excluded region [chr21 9825451 9827612 High_Mappability_island 1000 .]
Excluding peak [chr21 10773372 10773572 both.broad_peak_22242] which overlaps excluded region [chr21 10697886 10860890 centromeric_repeat 1000 .]
Excluding peak [chr21 11186125 11187338 both.broad_peak_22243] which overlaps excluded region [chr21 11186054 11188131 Satellite_repeat 1000 .]
Excluding peak [chr22 18878342 18878659 both.broad_peak_22759] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000 .]
Excluding peak [chr22 18879876 18880128 both.broad_peak_22760] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000 .]
Excluding peak [chr22 18883583 18883799 both.broad_peak_22761] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000 .]
Excluding peak [chr22 22652231 22653042 both.broad_peak_22847] which overlaps excluded region [chr22 22652105 22652554 TAR1 1000 .]
Excluding peak [chr3 25508907 25509133 both.broad_peak_23723] which overlaps excluded region [chr3 25508897 25509131 Low_mappability_island 1000 .]
Excluding peak [chr3 73159761 73160669 both.broad_peak_24512] which overlaps excluded region [chr3 73159606 73161131 snRNA 1000 .]
Excluding peak [chr3 96336804 96337073 both.broad_peak_24578] which overlaps excluded region [chr3 96335934 96337436 Low_mappability_island 1000 .]
Excluding peak [chr3 196625608 196625808 both.broad_peak_25903] which overlaps excluded region [chr3 196625514 196625860 Satellite_repeat 1000 .]
Excluding peak [chr4 49094768 49094968 both.broad_peak_26437] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49107449 49107766 both.broad_peak_26438] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49122928 49123231 both.broad_peak_26439] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49151102 49151911 both.broad_peak_26440] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000 .]
Excluding peak [chr4 49645060 49645303 both.broad_peak_26441] which overlaps excluded region [chr4 49488472 49662085 centromeric_repeat 1000 .]
Excluding peak [chr4 49659456 49659760 both.broad_peak_26442] which overlaps excluded region [chr4 49488472 49662085 centromeric_repeat 1000 .]
Excluding peak [chr4 56194226 56194485 both.broad_peak_26481] which overlaps excluded region [chr4 56194229 56194584 Low_mappability_island 1000 .]
Excluding peak [chr4 68264592 68266730 both.broad_peak_26530] which overlaps excluded region [chr4 68264186 68266830 centromeric_repeat 1000 .]
Excluding peak [chr4 191032545 191032745 both.broad_peak_27751] which overlaps excluded region [chr4 191026302 191044344 telomeric_repeat 1000 .]
Excluding peak [chr5 46364115 46364315 both.broad_peak_28116] which overlaps excluded region [chr5 45908253 46411114 centromeric_repeat 1000 .]
Excluding peak [chr5 49450550 49450756 both.broad_peak_28117] which overlaps excluded region [chr5 49405493 49554574 centromeric_repeat 1000 .]
Excluding peak [chr5 49547478 49547699 both.broad_peak_28118] which overlaps excluded region [chr5 49405493 49554574 centromeric_repeat 1000 .]
Excluding peak [chr5 134259765 134260404 both.broad_peak_29117] which overlaps excluded region [chr5 134258949 134264271 Low_mappability_island 1000 .]
Excluding peak [chr5 134262625 134262877 both.broad_peak_29118] which overlaps excluded region [chr5 134258949 134264271 Low_mappability_island 1000 .]
Excluding peak [chr6 58776533 58779369 both.broad_peak_30874] which overlaps excluded region [chr6 58745955 58780547 centromeric_repeat 1000 .]
Excluding peak [chr7 43878412 43878832 both.broad_peak_32927] which overlaps excluded region [chr7 43878355 43878530 TAR1 1000 .]
Excluding peak [chr7 45291476 45291676 both.broad_peak_32976] which overlaps excluded region [chr7 45291517 45291740 Low_mappability_island 1000 .]
Excluding peak [chr7 57549361 57549585 both.broad_peak_33054] which overlaps excluded region [chr7 57544726 57556913 Satellite_repeat 1000 .]
Excluding peak [chr7 57957789 57957996 both.broad_peak_33055] which overlaps excluded region [chr7 57939184 58055539 centromeric_repeat 1000 .]
Excluding peak [chr7 61968705 61969761 both.broad_peak_33056] which overlaps excluded region [chr7 61054285 62454680 centromeric_repeat 1000 .]
Excluding peak [chr7 61986136 61986336 both.broad_peak_33057] which overlaps excluded region [chr7 61054285 62454680 centromeric_repeat 1000 .]
Excluding peak [chr7 64099785 64100002 both.broad_peak_33067] which overlaps excluded region [chr7 64090864 64105357 BSR/Beta 1000 .]
Excluding peak [chr7 64100838 64101105 both.broad_peak_33068] which overlaps excluded region [chr7 64090864 64105357 BSR/Beta 1000 .]
Excluding peak [chr7 100550706 100551292 both.broad_peak_33481] which overlaps excluded region [chr7 100550640 100551321 Low_mappability_island 1000 .]
Excluding peak [chr8 43092778 43097038 both.broad_peak_34830] which overlaps excluded region [chr8 43092737 43097573 Satellite_repeat 1000 .]
Excluding peak [chr8 43779474 43779699 both.broad_peak_34831] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 43794100 43794746 both.broad_peak_34832] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 43820539 43820739 both.broad_peak_34833] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 43821992 43822192 both.broad_peak_34834] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000 .]
Excluding peak [chr8 46845309 46845549 both.broad_peak_34835] which overlaps excluded region [chr8 46838215 47457541 centromeric_repeat 1000 .]
Excluding peak [chr8 46852362 46852861 both.broad_peak_34836] which overlaps excluded region [chr8 46838215 47457541 centromeric_repeat 1000 .]
Excluding peak [chr8 100507997 100508253 both.broad_peak_35355] which overlaps excluded region [chr8 100508010 100508287 Low_mappability_island 1000 .]
Excluding peak [chr9 45356920 45357350 both.broad_peak_36413] which overlaps excluded region [chr9 45355954 45357644 telomeric_repeat 1000 .]
Excluding peak [chr9 45439723 45439970 both.broad_peak_36414] which overlaps excluded region [chr9 45435109 45443517 centromeric_repeat 1000 .]
Excluding peak [chr9 45441747 45442443 both.broad_peak_36415] which overlaps excluded region [chr9 45435109 45443517 centromeric_repeat 1000 .]
Excluding peak [chr9 66494045 66494608 both.broad_peak_36419] which overlaps excluded region [chr9 66494170 66494805 TAR1 1000 .]
Excluding peak [chr9 66824178 66824684 both.broad_peak_36421] which overlaps excluded region [chr9 66767710 66864329 centromeric_repeat 1000 .]
Excluding peak [chr9 66833083 66833633 both.broad_peak_36422] which overlaps excluded region [chr9 66767710 66864329 centromeric_repeat 1000 .]
Excluding peak [chr9 67339988 67340844 both.broad_peak_36425] which overlaps excluded region [chr9 67340080 67340661 TAR1 1000 .]
Excluding peak [chr9 68377361 68377574 both.broad_peak_36426] which overlaps excluded region [chr9 68376841 68377466 TAR1 1000 .]
Excluding peak [chr9 68412991 68414393 both.broad_peak_36427] which overlaps excluded region [chr9 68410775 68435115 Low_mappability_island 1000 .]
Excluding peak [chr9 70648541 70648768 both.broad_peak_36436] which overlaps excluded region [chr9 70648394 70648886 TAR1 1000 .]
chr1 peak count: 3667
chr2 peak count: 3154
chr3 peak count: 2528
chr4 peak count: 1814
chr5 peak count: 2042
chr6 peak count: 2483
chr7 peak count: 1999
chr8 peak count: 1647
chr9 peak count: 1475
chr10 peak count: 1815
chr11 peak count: 1878
chr12 peak count: 2078
chr13 peak count: 1026
chr14 peak count: 1275
chr15 peak count: 1140
chr16 peak count: 1211
chr17 peak count: 1664
chr18 peak count: 772
chr19 peak count: 1595
chr20 peak count: 864
chr21 peak count: 487
chr22 peak count: 662
Loaded 37276 peaks in 19.0984 seconds. (1951.79 peaks/second).
New maximum proper pair fragment length: 42 from [SRR891275.608 1123 chr1 569907 57 42M = 569907 42 CACTAACCATATACCAATGATGGCGCGATGTAACACGAGAAA @@@FFFEFFDHFBHIJIEFHJIGGF:CFGEDF?FFHEG@FGG XA:Z:chrM,+9359,42M,1; MD:Z:42 NM:i:0 AS:i:42 XS:i:37 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 330 from [SRR891278.50 1123 chr1 569913 27 50M = 570193 330 NCATATACCAATGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGC #1=DDFFFHHGHHJJJJIJJJGEGHIGGIIIJJJJIIFGGIJHIIJICHH XA:Z:chrM,+9365,50M,2; MD:Z:0C49 NM:i:1 AS:i:49 XS:i:44 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 53 from [SRR891275.421 1187 chr1 569924 15 50M = 569927 53 TGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGCCACCACACACC CCCFFFFFGHHHHIGIJIJIEHIGIIIJJGIJJJJGGGJJJJJGIIJJFI XA:Z:chrM,+9376,50M,1; MD:Z:50 NM:i:0 AS:i:50 XS:i:47 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 67 from [SRR891275.1617 99 chr1 2059335 60 50M = 2059352 67 CACCTTAGCTCTGGACACGAATTTGCGGTCATTGCTGTTCTTGTGTCTCT ???DB?D8C:CD42C<EB))3ACDEAEAD6D><<*?DB<9?BBBD?9DD4 MD:Z:50 NM:i:0 AS:i:50 XS:i:0 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 112 from [SRR891275.176 99 chr1 2419720 60 50M = 2419782 112 ATCCCTGGGACTGTAGGTGGGAAGGGCATTGCAAGGCACAGGGGCGGGGA @BCFFDEDDHHHHHIJICGHI=GHIGIJJJJJIJIJIGHFHIJBHHDB87 MD:Z:50 NM:i:0 AS:i:50 XS:i:0 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 361 from [SRR891278.227 99 chr1 17047555 60 50M = 17047866 361 GACTCCCTCAAGGGCAGCTGAGAGGGAGGACTCAGGGCACTGGGGAAAGT @CCFFFFFHGHHHJGEHIIJGGJIIJDIIGGEHIIJJBFGGHGEHHIJFC XA:Z:chr1,+144886802,48M2S,2; MD:Z:50 NM:i:0 AS:i:50 XS:i:42 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 216 from [SRR891275.1770 163 chr1 18154381 60 50M = 18154547 216 CAACTGTTTTGCTTACTCTGACTAATACAGAGAAGGGAGCCACAATATAC C@CFFFDFGHHHHJJJJJJJJJJJJJIEIIHIJJJIGIJIJJJCHHIJJJ MD:Z:50 NM:i:0 AS:i:50 XS:i:21 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 562 from [SRR891275.385 163 chr1 43042844 60 50M = 43043356 562 AACCTACAGGAAAAGCTGGTTCAGGAGAAATCTAAAGTTGCTGATGCAGA CCCFFFFFHGGHGJJJJFIEHHHJJGIIJIIJJJJJIHGIJIJGIIJIII MD:Z:50 NM:i:0 AS:i:50 XS:i:0 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 609 from [SRR891275.714 99 chr1 79875808 60 50M = 79876367 609 GGCCCAGCCAAGTTGACACATAAAATAAACTTTCACAATATTGCAGGCAG @@@DDDFFFHAH<EFGGGG@EGECHIDHHAE<<*11?DB?9*?*:336?B MD:Z:50 NM:i:0 AS:i:50 XS:i:30 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 424 from [SRR891278.592 163 chr1 238449255 60 50M = 238449629 424 CCTGCAATTCTGAATAGGTCTGTGAATATACAGACTTTTTATTTGTACAT B@@BDDFFHGHGHJGEHDFHGHDHHJCEGIIGGEHIJGIGEHIIIIGEIH MD:Z:50 NM:i:0 AS:i:50 XS:i:0 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 633 from [SRR891278.342 99 chr2 4228733 60 50M = 4229316 633 CATTTAATGCAAACTAATCTAGCTATTATCATCTGGAGCTGCAGGCTATA CCCFFFFDHHGFHABDIGIIEGIIGCHCHIIIIIGHAEF):CCF;F;BDH MD:Z:50 NM:i:0 AS:i:50 XS:i:20 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 649 from [SRR891278.1592 99 chr2 55845390 60 50M = 55845989 649 GTGTGTTGACGATTTCCTGTTTCTTGCAGAGCGATTCACCGTTAAGGCTC ;1=+AB3BB<<?AC?EEAE+3A<B4CC93*:9C)?;DBD?68)?###### MD:Z:33C16 NM:i:1 AS:i:45 XS:i:0 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
Calculating TSS coverage...
Added TSS coverage for chr22; thread count=1
Added TSS coverage for chr21; thread count=1
Added TSS coverage for chr20; thread count=1
Added TSS coverage for chr19; thread count=1
Added TSS coverage for chr18; thread count=1
Added TSS coverage for chr17; thread count=1
Added TSS coverage for chr16; thread count=1
Added TSS coverage for chr15; thread count=1
Added TSS coverage for chr14; thread count=1
Added TSS coverage for chr13; thread count=1
Added TSS coverage for chr12; thread count=1
Added TSS coverage for chr11; thread count=1
Added TSS coverage for chr10; thread count=1
Added TSS coverage for chr9; thread count=1
Added TSS coverage for chr8; thread count=1
Added TSS coverage for chr7; thread count=1
Added TSS coverage for chr6; thread count=1
Added TSS coverage for chr5; thread count=1
Added TSS coverage for chr4; thread count=1
Added TSS coverage for chr3; thread count=1
Added TSS coverage for chr2; thread count=1
Added TSS coverage for chr1; thread count=1
All TSS jobs started. Waiting for last ones to complete.
Calculated TSS coverage in 0.116528 seconds.
Calculating TSS metrics...
Calculated TSS metrics in 0.000316868 seconds.
Calculating TSS metrics...
Calculated TSS metrics in 0.000320462 seconds.
Analyzed 1040 reads in 0.216513 seconds (4803.41 reads/second).
ataqv 1.3.1
Operating parameters
====================
Thread limit: 1
Ignoring read groups: no
Is single nucleus: no
TSS extension: 1000
Experiment information
======================
Organism: human
Description: a collector for unit tests
URL: https://theparkerlab.org
Reference genome configuration
==============================
Mitochondrial reference: chrM
Autosomal references:
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19,
20, 21, 22, chr1, chr2, chr3, chr4, chr5, chr6, chr7, chr8, chr9,
chr10, chr11, chr12, chr13, chr14, chr15, chr16, chr17, chr18,
chr19, chr20, chr21, chr22
Read Group
==========
ID: SRR891275
Library: SRR891275
Sample: GSM1155964
Description: a library of brutal tests?
Sequencing center:
Sequencing date:
Sequencing platform: ILLUMINA
Platform model:
Platform unit:
Flow order:
Key sequence:
Predicted median insert size:
Programs:
Metrics
-------
Read Mapping Metrics
--------------------
Total reads: 520
Total problems: 104 (20.000%)
Properly paired and mapped reads: 416 (80.000%)
Secondary reads: 10 (1.923%)
Supplementary reads: 0 (0.000%)
Duplicate reads: 155 (29.808% of all reads)
Quality Indicators
------------------
Short to mononucleosomal ratio: 1.281
High quality, nonduplicate, properly paired, uniquely mapped autosomal alignments: 200
as a percentage of autosomal reads: 91.324%
as a percentage of all reads: 38.462%
TSS enrichment: 6.000
Paired Read Metrics
-------------------
Paired reads: 520 (100.000%)
Paired and mapped reads: 424 (81.538%)
FR reads: 416 (80.000000%)
First of pair: 260 (50.000%)
Second of pair: 260 (50.000%)
Forward reads: 268 (51.538%)
Reverse reads: 252 (48.462%)
Forward mate reads: 261 (50.192%)
Reverse mate reads: 259 (49.808%)
Unmapped Read Metrics
---------------------
Unmapped reads: 9 (1.731%)
Unmapped mate reads: 2 (0.385%)
Reads not passing quality controls: 0 (0.000%)
Unpaired reads: 0 (0.000%)
Reads with zero mapping quality: 62 (11.923%)
Aberrant Mapping Metrics
------------------------
RF reads: 9 (1.730769%)
FF reads: 6 (1.153846%)
RR reads: 8 (1.538462%)
Reads that paired and mapped but...
on different chromosomes: 6 (1.154%)
probably too far from their mates: 2 (0.385%) (longest proper fragment seems to be 609)
just not properly: 0 (0.000%)
Autosomal/Mitochondrial Metrics
-------------------------------
Total autosomal reads: 219 (42.115% of all reads)
Total mitochondrial reads: 177 (34.038% of all reads)
Duplicate autosomal reads: 18 (8.219% of all autosomal reads)
Duplicate mitochondrial reads: 93 (52.542% of all mitochondrial reads)
Mapping Quality
---------------
Mean MAPQ: 47.033
Median MAPQ: 60.000
Reads with MAPQ >=...
5: 439 (84.423%)
10: 439 (84.423%)
15: 438 (84.231%)
20: 436 (83.846%)
25: 435 (83.654%)
30: 420 (80.769%)
Peak Metrics
------------
Peak count: 37276
High quality autosomal alignments that overlapped peaks: 23 (11.500% of all high quality autosomal alignments)
Number of high quality autosomal alignments overlapping the top 10,000 peaks:
Top peak: 2 (1.000% of all high quality autosomal alignments)
Top 10 peaks: 20 (10.000% of all high quality autosomal alignments)
Top 100 peaks: 23 (11.500% of all high quality autosomal alignments)
Top 1000 peaks: 23 (11.500% of all high quality autosomal alignments)
Top 10,000 peaks: 23 (11.500% of all high quality autosomal alignments)
Read Group
==========
ID: SRR891278
Library: SRR891278
Sample: GSM1155967
Description: a library of brutal tests?
Sequencing center:
Sequencing date:
Sequencing platform: ILLUMINA
Platform model:
Platform unit:
Flow order:
Key sequence:
Predicted median insert size:
Programs:
Metrics
-------
Read Mapping Metrics
--------------------
Total reads: 520
Total problems: 90 (17.308%)
Properly paired and mapped reads: 430 (82.692%)
Secondary reads: 10 (1.923%)
Supplementary reads: 0 (0.000%)
Duplicate reads: 158 (30.385% of all reads)
Quality Indicators
------------------
Short to mononucleosomal ratio: 2.357
High quality, nonduplicate, properly paired, uniquely mapped autosomal alignments: 200
as a percentage of autosomal reads: 91.743%
as a percentage of all reads: 38.462%
TSS enrichment: 3.687
Paired Read Metrics
-------------------
Paired reads: 520 (100.000%)
Paired and mapped reads: 440 (84.615%)
FR reads: 430 (82.692308%)
First of pair: 259 (49.808%)
Second of pair: 261 (50.192%)
Forward reads: 261 (50.192%)
Reverse reads: 259 (49.808%)
Forward mate reads: 260 (50.000%)
Reverse mate reads: 260 (50.000%)
Unmapped Read Metrics
---------------------
Unmapped reads: 8 (1.538%)
Unmapped mate reads: 4 (0.769%)
Reads not passing quality controls: 0 (0.000%)
Unpaired reads: 0 (0.000%)
Reads with zero mapping quality: 49 (9.423%)
Aberrant Mapping Metrics
------------------------
RF reads: 6 (1.153846%)
FF reads: 4 (0.769231%)
RR reads: 9 (1.730769%)
Reads that paired and mapped but...
on different chromosomes: 8 (1.538%)
probably too far from their mates: 2 (0.385%) (longest proper fragment seems to be 649)
just not properly: 0 (0.000%)
Autosomal/Mitochondrial Metrics
-------------------------------
Total autosomal reads: 218 (41.923% of all reads)
Total mitochondrial reads: 192 (36.923% of all reads)
Duplicate autosomal reads: 17 (7.798% of all autosomal reads)
Duplicate mitochondrial reads: 92 (47.917% of all mitochondrial reads)
Mapping Quality
---------------
Mean MAPQ: 48.044
Median MAPQ: 60.000
Reads with MAPQ >=...
5: 449 (86.346%)
10: 445 (85.577%)
15: 443 (85.192%)
20: 442 (85.000%)
25: 442 (85.000%)
30: 417 (80.192%)
Peak Metrics
------------
Peak count: 37276
High quality autosomal alignments that overlapped peaks: 92 (46.000% of all high quality autosomal alignments)
Number of high quality autosomal alignments overlapping the top 10,000 peaks:
Top peak: 2 (1.000% of all high quality autosomal alignments)
Top 10 peaks: 20 (10.000% of all high quality autosomal alignments)
Top 100 peaks: 92 (46.000% of all high quality autosomal alignments)
Top 1000 peaks: 92 (46.000% of all high quality autosomal alignments)
Top 10,000 peaks: 92 (46.000% of all high quality autosomal alignments)
[E::hts_open_format] Failed to open file "missing_alignment_file.bam" : No such file or directory
Read 411 excluded regions from exclude.dac.bed.gz.
Read 1649 excluded regions from exclude.duke.bed.gz.
Collecting metrics from test.bam.
Logging problematic reads to Test collector.problems.
Loading peaks for read group Test collector from test.peaks.gz.
Excluding peak [chr1 569780 570073 both.broad_peak_1] which overlaps excluded region [chr1 564449 570371 High_Mappability_island 1000.000 .]
Excluding peak [chr1 5727305 5727512 both.broad_peak_97] which overlaps excluded region [chr1 5725866 5736651 Low_mappability_island 1000.000 .]
Excluding peak [chr1 16840415 16841121 both.broad_peak_297] which overlaps excluded region [chr1 16839923 16841396 Low_mappability_island 1000.000 .]
Excluding peak [chr1 121354253 121354849 both.broad_peak_1896] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000.000 .]
Excluding peak [chr1 121478396 121478755 both.broad_peak_1897] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000.000 .]
Excluding peak [chr1 121484326 121485516 both.broad_peak_1898] which overlaps excluded region [chr1 121351474 121487059 centromeric_repeat 1000.000 .]
Excluding peak [chr1 142538265 142538603 both.broad_peak_1899] which overlaps excluded region [chr1 142535434 142543081 Satellite_repeat 1000.000 .]
Excluding peak [chr1 148928074 148928756 both.broad_peak_1971] which overlaps excluded region [chr1 148927799 148928362 TAR1 1000.000 .]
Excluding peak [chr10 38804202 38804431 both.broad_peak_4296] which overlaps excluded region [chr10 38772277 38819357 Satellite_repeat 1000.000 .]
Excluding peak [chr10 38817221 38818020 both.broad_peak_4297] which overlaps excluded region [chr10 38772277 38819357 Satellite_repeat 1000.000 .]
Excluding peak [chr10 38872037 38872278 both.broad_peak_4298] which overlaps excluded region [chr10 38868892 38889025 Satellite_repeat 1000.000 .]
Excluding peak [chr10 42355450 42355650 both.broad_peak_4299] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42358135 42358433 both.broad_peak_4300] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42364634 42365245 both.broad_peak_4301] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42379790 42380383 both.broad_peak_4302] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42384574 42385679 both.broad_peak_4303] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42392602 42392861 both.broad_peak_4304] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42396775 42396995 both.broad_peak_4305] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42398498 42400769 both.broad_peak_4306] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42404317 42404537 both.broad_peak_4307] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42408166 42408438 both.broad_peak_4308] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42442445 42442676 both.broad_peak_4309] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42527244 42528189 both.broad_peak_4310] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42529217 42530048 both.broad_peak_4311] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42534598 42534872 both.broad_peak_4312] which overlaps excluded region [chr10 42354835 42548642 centromeric_repeat 1000.000 .]
Excluding peak [chr10 42596780 42597198 both.broad_peak_4313] which overlaps excluded region [chr10 42596676 42602082 Satellite_repeat 1000.000 .]
Excluding peak [chr10 42599471 42600289 both.broad_peak_4314] which overlaps excluded region [chr10 42596676 42602082 Satellite_repeat 1000.000 .]
Excluding peak [chr10 42817448 42818278 both.broad_peak_4315] which overlaps excluded region [chr10 42790522 42818398 Satellite_repeat 1000.000 .]
Excluding peak [chr11 189746 190314 both.broad_peak_5511] which overlaps excluded region [chr11 189419 190691 TAR1 1000.000 .]
Excluding peak [chr11 50731852 50732074 both.broad_peak_6138] which overlaps excluded region [chr11 50318471 50784078 centromeric_repeat 1000.000 .]
Excluding peak [chr11 51572059 51572261 both.broad_peak_6139] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000.000 .]
Excluding peak [chr11 51579362 51580694 both.broad_peak_6140] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000.000 .]
Excluding peak [chr11 51591018 51591457 both.broad_peak_6141] which overlaps excluded region [chr11 51567242 51594226 centromeric_repeat 1000.000 .]
Excluding peak [chr11 55006615 55007430 both.broad_peak_6142] which overlaps excluded region [chr11 54694046 55027975 centromeric_repeat 1000.000 .]
Excluding peak [chr11 73221686 73221937 both.broad_peak_6590] which overlaps excluded region [chr11 73221660 73221946 Low_mappability_island 1000.000 .]
Excluding peak [chr12 94193 94658 both.broad_peak_7396] which overlaps excluded region [chr12 94147 95158 TAR1 1000.000 .]
Excluding peak [chr12 34841382 34841617 both.broad_peak_7957] which overlaps excluded region [chr12 34432130 34857010 centromeric_repeat 1000.000 .]
Excluding peak [chr12 34846246 34846543 both.broad_peak_7958] which overlaps excluded region [chr12 34432130 34857010 centromeric_repeat 1000.000 .]
Excluding peak [chr12 38008155 38008894 both.broad_peak_7959] which overlaps excluded region [chr12 37989447 38441828 centromeric_repeat 1000.000 .]
Excluding peak [chr12 38023173 38023373 both.broad_peak_7960] which overlaps excluded region [chr12 37989447 38441828 centromeric_repeat 1000.000 .]
Excluding peak [chr12 118573678 118574095 both.broad_peak_9235] which overlaps excluded region [chr12 118573638 118573695 LSU-rRNA_Hsa 1000.000 .]
Excluding peak [chr12 127650467 127651165 both.broad_peak_9421] which overlaps excluded region [chr12 127650407 127651075 LSU-rRNA_Hsa 1000.000 .]
Excluding peak [chr14 32953483 32953821 both.broad_peak_10712] which overlaps excluded region [chr14 32953263 32954381 Low_mappability_island 1000.000 .]
Excluding peak [chr15 80444564 80445859 both.broad_peak_12630] which overlaps excluded region [chr15 80445513 80445569 (GAGTG)n 1000.000 .]
Excluding peak [chr16 60436 61192 both.broad_peak_12924] which overlaps excluded region [chr16 60058 61142 TAR1 1000.000 .]
Excluding peak [chr16 33866265 33866524 both.broad_peak_13513] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000.000 .]
Excluding peak [chr16 33918664 33919304 both.broad_peak_13514] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000.000 .]
Excluding peak [chr16 34009313 34009561 both.broad_peak_13515] which overlaps excluded region [chr16 33864355 34023306 centromeric_repeat 1000.000 .]
Excluding peak [chr16 46386270 46386795 both.broad_peak_13516] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000.000 .]
Excluding peak [chr16 46391235 46392140 both.broad_peak_13517] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000.000 .]
Excluding peak [chr16 46403548 46403849 both.broad_peak_13518] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000.000 .]
Excluding peak [chr16 46416804 46417405 both.broad_peak_13519] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000.000 .]
Excluding peak [chr16 46427429 46427991 both.broad_peak_13520] which overlaps excluded region [chr16 46385718 46456668 Satellite_repeat 1000.000 .]
Excluding peak [chr17 22020593 22020916 both.broad_peak_14569] which overlaps excluded region [chr17 22018524 22032049 Low_mappability_island 1000.000 .]
Excluding peak [chr17 22252084 22253296 both.broad_peak_14570] which overlaps excluded region [chr17 22221073 22263006 centromeric_repeat 1000.000 .]
Excluding peak [chr17 22261278 22261740 both.broad_peak_14571] which overlaps excluded region [chr17 22221073 22263006 centromeric_repeat 1000.000 .]
Excluding peak [chr17 25264883 25265249 both.broad_peak_14572] which overlaps excluded region [chr17 25263010 25268059 Satellite_repeat 1000.000 .]
Excluding peak [chr17 41381728 41382265 both.broad_peak_14950] which overlaps excluded region [chr17 41381502 41382591 High_Mappability_island 1000.000 .]
Excluding peak [chr17 41465631 41466936 both.broad_peak_14957] which overlaps excluded region [chr17 41465562 41467288 High_Mappability_island 1000.000 .]
Excluding peak [chr17 51183057 51183341 both.broad_peak_15172] which overlaps excluded region [chr17 51183038 51183763 Low_mappability_island 1000.000 .]
Excluding peak [chr17 58602907 58603721 both.broad_peak_15290] which overlaps excluded region [chr17 58603715 58603738 (GAGTG)n 1000.000 .]
Excluding peak [chr18 111564 112042 both.broad_peak_15816] which overlaps excluded region [chr18 105658 112233 Satellite_repeat 1000.000 .]
Excluding peak [chr18 18512827 18513193 both.broad_peak_16011] which overlaps excluded region [chr18 18510894 18520356 centromeric_repeat 1000.000 .]
Excluding peak [chr18 18516045 18520399 both.broad_peak_16012] which overlaps excluded region [chr18 18510894 18520356 centromeric_repeat 1000.000 .]
Excluding peak [chr19 21776802 21777550 both.broad_peak_17342] which overlaps excluded region [chr19 21776132 21780768 BSR/Beta 1000.000 .]
Excluding peak [chr19 24169382 24170027 both.broad_peak_17364] which overlaps excluded region [chr19 24156856 24171961 BSR/Beta 1000.000 .]
Excluding peak [chr19 24474565 24474765 both.broad_peak_17369] which overlaps excluded region [chr19 24385474 24633168 centromeric_repeat 1000.000 .]
Excluding peak [chr19 24526069 24526320 both.broad_peak_17370] which overlaps excluded region [chr19 24385474 24633168 centromeric_repeat 1000.000 .]
Excluding peak [chr19 27731880 27733339 both.broad_peak_17371] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000.000 .]
Excluding peak [chr19 27738359 27738668 both.broad_peak_17372] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000.000 .]
Excluding peak [chr19 27756701 27756901 both.broad_peak_17373] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000.000 .]
Excluding peak [chr19 27801311 27801531 both.broad_peak_17374] which overlaps excluded region [chr19 27730611 28262682 centromeric_repeat 1000.000 .]
Excluding peak [chr19 37784325 37784692 both.broad_peak_17536] which overlaps excluded region [chr19 37759473 37797722 centromeric_repeat 1000.000 .]
Excluding peak [chr19 42069917 42070450 both.broad_peak_17680] which overlaps excluded region [chr19 42069989 42071891 LSU-rRNA_Hsa 1000.000 .]
Excluding peak [chr2 89848588 89848836 both.broad_peak_19338] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000.000 .]
Excluding peak [chr2 89872032 89872646 both.broad_peak_19339] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000.000 .]
Excluding peak [chr2 89878336 89879257 both.broad_peak_19340] which overlaps excluded region [chr2 89830421 89880514 Satellite_repeat 1000.000 .]
Excluding peak [chr2 90449580 90449808 both.broad_peak_19342] which overlaps excluded region [chr2 90443001 90545431 Low_mappability_island 1000.000 .]
Excluding peak [chr2 91847848 91848177 both.broad_peak_19344] which overlaps excluded region [chr2 91847957 91848503 TAR1 1000.000 .]
Excluding peak [chr2 92272876 92273767 both.broad_peak_19345] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 92281197 92281779 both.broad_peak_19346] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 92284237 92284462 both.broad_peak_19347] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 92290435 92291262 both.broad_peak_19348] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 92296588 92297023 both.broad_peak_19349] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 92305535 92305892 both.broad_peak_19350] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 92317234 92317870 both.broad_peak_19351] which overlaps excluded region [chr2 92267428 92326280 centromeric_repeat 1000.000 .]
Excluding peak [chr2 114361072 114362020 both.broad_peak_19697] which overlaps excluded region [chr2 114361054 114362417 TAR1 1000.000 .]
Excluding peak [chr2 132559385 132560425 both.broad_peak_19833] which overlaps excluded region [chr2 132560214 132560696 TAR1 1000.000 .]
Excluding peak [chr2 132996509 132996755 both.broad_peak_19834] which overlaps excluded region [chr2 132994855 133007983 ALR/Alpha 1000.000 .]
Excluding peak [chr2 149639210 149639450 both.broad_peak_19986] which overlaps excluded region [chr2 149639207 149639515 Low_mappability_island 1000.000 .]
Excluding peak [chr2 162135291 162136055 both.broad_peak_20150] which overlaps excluded region [chr2 162135000 162139241 Low_mappability_island 1000.000 .]
Excluding peak [chr20 26269111 26270030 both.broad_peak_21666] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000.000 .]
Excluding peak [chr20 26278258 26278484 both.broad_peak_21667] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000.000 .]
Excluding peak [chr20 26289332 26290609 both.broad_peak_21668] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000.000 .]
Excluding peak [chr20 26305634 26305887 both.broad_peak_21669] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000.000 .]
Excluding peak [chr20 26317322 26318676 both.broad_peak_21670] which overlaps excluded region [chr20 26257032 26320267 centromeric_repeat 1000.000 .]
Excluding peak [chr20 29512475 29512675 both.broad_peak_21671] which overlaps excluded region [chr20 29511127 29514978 ALR/Alpha 1000.000 .]
Excluding peak [chr20 29517798 29518922 both.broad_peak_21672] which overlaps excluded region [chr20 29517710 29521147 centromeric_repeat 1000.000 .]
Excluding peak [chr20 29813756 29813985 both.broad_peak_21678] which overlaps excluded region [chr20 29803876 29833334 centromeric_repeat 1000.000 .]
Excluding peak [chr20 29831826 29832026 both.broad_peak_21679] which overlaps excluded region [chr20 29803876 29833334 centromeric_repeat 1000.000 .]
Excluding peak [chr20 62917250 62917592 both.broad_peak_22240] which overlaps excluded region [chr20 62916702 62918053 telomeric_repeat 1000.000 .]
Excluding peak [chr21 9825749 9827187 both.broad_peak_22241] which overlaps excluded region [chr21 9825451 9827612 High_Mappability_island 1000.000 .]
Excluding peak [chr21 10773372 10773572 both.broad_peak_22242] which overlaps excluded region [chr21 10697886 10860890 centromeric_repeat 1000.000 .]
Excluding peak [chr21 11186125 11187338 both.broad_peak_22243] which overlaps excluded region [chr21 11186054 11188131 Satellite_repeat 1000.000 .]
Excluding peak [chr22 18878342 18878659 both.broad_peak_22759] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000.000 .]
Excluding peak [chr22 18879876 18880128 both.broad_peak_22760] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000.000 .]
Excluding peak [chr22 18883583 18883799 both.broad_peak_22761] which overlaps excluded region [chr22 18876789 18884510 Satellite_repeat 1000.000 .]
Excluding peak [chr22 22652231 22653042 both.broad_peak_22847] which overlaps excluded region [chr22 22652105 22652554 TAR1 1000.000 .]
Excluding peak [chr3 25508907 25509133 both.broad_peak_23723] which overlaps excluded region [chr3 25508897 25509131 Low_mappability_island 1000.000 .]
Excluding peak [chr3 73159761 73160669 both.broad_peak_24512] which overlaps excluded region [chr3 73159606 73161131 snRNA 1000.000 .]
Excluding peak [chr3 96336804 96337073 both.broad_peak_24578] which overlaps excluded region [chr3 96335934 96337436 Low_mappability_island 1000.000 .]
Excluding peak [chr3 196625608 196625808 both.broad_peak_25903] which overlaps excluded region [chr3 196625514 196625860 Satellite_repeat 1000.000 .]
Excluding peak [chr4 49094768 49094968 both.broad_peak_26437] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000.000 .]
Excluding peak [chr4 49107449 49107766 both.broad_peak_26438] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000.000 .]
Excluding peak [chr4 49122928 49123231 both.broad_peak_26439] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000.000 .]
Excluding peak [chr4 49151102 49151911 both.broad_peak_26440] which overlaps excluded region [chr4 49085372 49342114 centromeric_repeat 1000.000 .]
Excluding peak [chr4 49645060 49645303 both.broad_peak_26441] which overlaps excluded region [chr4 49488472 49662085 centromeric_repeat 1000.000 .]
Excluding peak [chr4 49659456 49659760 both.broad_peak_26442] which overlaps excluded region [chr4 49488472 49662085 centromeric_repeat 1000.000 .]
Excluding peak [chr4 56194226 56194485 both.broad_peak_26481] which overlaps excluded region [chr4 56194229 56194584 Low_mappability_island 1000.000 .]
Excluding peak [chr4 68264592 68266730 both.broad_peak_26530] which overlaps excluded region [chr4 68264186 68266830 centromeric_repeat 1000.000 .]
Excluding peak [chr4 191032545 191032745 both.broad_peak_27751] which overlaps excluded region [chr4 191026302 191044344 telomeric_repeat 1000.000 .]
Excluding peak [chr5 46364115 46364315 both.broad_peak_28116] which overlaps excluded region [chr5 45908253 46411114 centromeric_repeat 1000.000 .]
Excluding peak [chr5 49450550 49450756 both.broad_peak_28117] which overlaps excluded region [chr5 49405493 49554574 centromeric_repeat 1000.000 .]
Excluding peak [chr5 49547478 49547699 both.broad_peak_28118] which overlaps excluded region [chr5 49405493 49554574 centromeric_repeat 1000.000 .]
Excluding peak [chr5 134259765 134260404 both.broad_peak_29117] which overlaps excluded region [chr5 134258949 134264271 Low_mappability_island 1000.000 .]
Excluding peak [chr5 134262625 134262877 both.broad_peak_29118] which overlaps excluded region [chr5 134258949 134264271 Low_mappability_island 1000.000 .]
Excluding peak [chr6 58776533 58779369 both.broad_peak_30874] which overlaps excluded region [chr6 58745955 58780547 centromeric_repeat 1000.000 .]
Excluding peak [chr7 43878412 43878832 both.broad_peak_32927] which overlaps excluded region [chr7 43878355 43878530 TAR1 1000.000 .]
Excluding peak [chr7 45291476 45291676 both.broad_peak_32976] which overlaps excluded region [chr7 45291517 45291740 Low_mappability_island 1000.000 .]
Excluding peak [chr7 57549361 57549585 both.broad_peak_33054] which overlaps excluded region [chr7 57544726 57556913 Satellite_repeat 1000.000 .]
Excluding peak [chr7 57957789 57957996 both.broad_peak_33055] which overlaps excluded region [chr7 57939184 58055539 centromeric_repeat 1000.000 .]
Excluding peak [chr7 61968705 61969761 both.broad_peak_33056] which overlaps excluded region [chr7 61054285 62454680 centromeric_repeat 1000.000 .]
Excluding peak [chr7 61986136 61986336 both.broad_peak_33057] which overlaps excluded region [chr7 61054285 62454680 centromeric_repeat 1000.000 .]
Excluding peak [chr7 64099785 64100002 both.broad_peak_33067] which overlaps excluded region [chr7 64090864 64105357 BSR/Beta 1000.000 .]
Excluding peak [chr7 64100838 64101105 both.broad_peak_33068] which overlaps excluded region [chr7 64090864 64105357 BSR/Beta 1000.000 .]
Excluding peak [chr7 100550706 100551292 both.broad_peak_33481] which overlaps excluded region [chr7 100550640 100551321 Low_mappability_island 1000.000 .]
Excluding peak [chr8 43092778 43097038 both.broad_peak_34830] which overlaps excluded region [chr8 43092737 43097573 Satellite_repeat 1000.000 .]
Excluding peak [chr8 43779474 43779699 both.broad_peak_34831] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000.000 .]
Excluding peak [chr8 43794100 43794746 both.broad_peak_34832] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000.000 .]
Excluding peak [chr8 43820539 43820739 both.broad_peak_34833] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000.000 .]
Excluding peak [chr8 43821992 43822192 both.broad_peak_34834] which overlaps excluded region [chr8 43399486 43843604 centromeric_repeat 1000.000 .]
Excluding peak [chr8 46845309 46845549 both.broad_peak_34835] which overlaps excluded region [chr8 46838215 47457541 centromeric_repeat 1000.000 .]
Excluding peak [chr8 46852362 46852861 both.broad_peak_34836] which overlaps excluded region [chr8 46838215 47457541 centromeric_repeat 1000.000 .]
Excluding peak [chr8 100507997 100508253 both.broad_peak_35355] which overlaps excluded region [chr8 100508010 100508287 Low_mappability_island 1000.000 .]
Excluding peak [chr9 45356920 45357350 both.broad_peak_36413] which overlaps excluded region [chr9 45355954 45357644 telomeric_repeat 1000.000 .]
Excluding peak [chr9 45439723 45439970 both.broad_peak_36414] which overlaps excluded region [chr9 45435109 45443517 centromeric_repeat 1000.000 .]
Excluding peak [chr9 45441747 45442443 both.broad_peak_36415] which overlaps excluded region [chr9 45435109 45443517 centromeric_repeat 1000.000 .]
Excluding peak [chr9 66494045 66494608 both.broad_peak_36419] which overlaps excluded region [chr9 66494170 66494805 TAR1 1000.000 .]
Excluding peak [chr9 66824178 66824684 both.broad_peak_36421] which overlaps excluded region [chr9 66767710 66864329 centromeric_repeat 1000.000 .]
Excluding peak [chr9 66833083 66833633 both.broad_peak_36422] which overlaps excluded region [chr9 66767710 66864329 centromeric_repeat 1000.000 .]
Excluding peak [chr9 67339988 67340844 both.broad_peak_36425] which overlaps excluded region [chr9 67340080 67340661 TAR1 1000.000 .]
Excluding peak [chr9 68377361 68377574 both.broad_peak_36426] which overlaps excluded region [chr9 68376841 68377466 TAR1 1000.000 .]
Excluding peak [chr9 68412991 68414393 both.broad_peak_36427] which overlaps excluded region [chr9 68410775 68435115 Low_mappability_island 1000.000 .]
Excluding peak [chr9 70648541 70648768 both.broad_peak_36436] which overlaps excluded region [chr9 70648394 70648886 TAR1 1000.000 .]
chr1 peak count: 3667
chr2 peak count: 3154
chr3 peak count: 2528
chr4 peak count: 1814
chr5 peak count: 2042
chr6 peak count: 2483
chr7 peak count: 1999
chr8 peak count: 1647
chr9 peak count: 1475
chr10 peak count: 1815
chr11 peak count: 1878
chr12 peak count: 2078
chr13 peak count: 1026
chr14 peak count: 1275
chr15 peak count: 1140
chr16 peak count: 1211
chr17 peak count: 1664
chr18 peak count: 772
chr19 peak count: 1595
chr20 peak count: 864
chr21 peak count: 487
chr22 peak count: 662
Loaded 37276 peaks in 19.087 seconds. (1952.912 peaks/second).
New maximum proper pair fragment length: 42 from [SRR891275.608 1123 chr1 569907 57 42M = 569907 42 CACTAACCATATACCAATGATGGCGCGATGTAACACGAGAAA @@@FFFEFFDHFBHIJIEFHJIGGF:CFGEDF?FFHEG@FGG XA:Z:chrM,+9359,42M,1; MD:Z:42 NM:i:0 AS:i:42 XS:i:37 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 330 from [SRR891278.50 1123 chr1 569913 27 50M = 570193 330 NCATATACCAATGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGC #1=DDFFFHHGHHJJJJIJJJGEGHIGGIIIJJJJIIFGGIJHIIJICHH XA:Z:chrM,+9365,50M,2; MD:Z:0C49 NM:i:1 AS:i:49 XS:i:44 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 361 from [SRR891278.227 99 chr1 17047555 60 50M = 17047866 361 GACTCCCTCAAGGGCAGCTGAGAGGGAGGACTCAGGGCACTGGGGAAAGT @CCFFFFFHGHHHJGEHIIJGGJIIJDIIGGEHIIJJBFGGHGEHHIJFC XA:Z:chr1,+144886802,48M2S,2; MD:Z:50 NM:i:0 AS:i:50 XS:i:42 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 562 from [SRR891275.385 163 chr1 43042844 60 50M = 43043356 562 AACCTACAGGAAAAGCTGGTTCAGGAGAAATCTAAAGTTGCTGATGCAGA CCCFFFFFHGGHGJJJJFIEHHHJJGIIJIIJJJJJIHGIJIJGIIJIII MD:Z:50 NM:i:0 AS:i:50 XS:i:0 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 609 from [SRR891275.714 99 chr1 79875808 60 50M = 79876367 609 GGCCCAGCCAAGTTGACACATAAAATAAACTTTCACAATATTGCAGGCAG @@@DDDFFFHAH<EFGGGG@EGECHIDHHAE<<*11?DB?9*?*:336?B MD:Z:50 NM:i:0 AS:i:50 XS:i:30 RG:Z:SRR891275 PG:Z:MarkDuplicates]
New maximum proper pair fragment length: 633 from [SRR891278.342 99 chr2 4228733 60 50M = 4229316 633 CATTTAATGCAAACTAATCTAGCTATTATCATCTGGAGCTGCAGGCTATA CCCFFFFDHHGFHABDIGIIEGIIGCHCHIIIIIGHAEF):CCF;F;BDH MD:Z:50 NM:i:0 AS:i:50 XS:i:20 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
New maximum proper pair fragment length: 649 from [SRR891278.1592 99 chr2 55845390 60 50M = 55845989 649 GTGTGTTGACGATTTCCTGTTTCTTGCAGAGCGATTCACCGTTAAGGCTC ;1=+AB3BB<<?AC?EEAE+3A<B4CC93*:9C)?;DBD?68)?###### MD:Z:33C16 NM:i:1 AS:i:45 XS:i:0 RG:Z:SRR891278 PG:Z:MarkDuplicates-4FB7F45F]
Analyzed 1040 reads in 0.043 seconds (24369.382 reads/second).
ataqv 1.3.1
Operating parameters
====================
Thread limit: 1
Ignoring read groups: yes
Is single nucleus: no
Experiment information
======================
Organism: human
Description: a collector for unit tests
URL: https://theparkerlab.org
Reference genome configuration
==============================
Mitochondrial reference: chrM
Autosomal references:
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19,
20, 21, 22, chr1, chr2, chr3, chr4, chr5, chr6, chr7, chr8, chr9,
chr10, chr11, chr12, chr13, chr14, chr15, chr16, chr17, chr18,
chr19, chr20, chr21, chr22
Read Group
==========
ID: Test collector
Library: Test collector
Sample: Test collector
Description: a library of brutal tests?
Sequencing center:
Sequencing date:
Sequencing platform:
Platform model:
Platform unit:
Flow order:
Key sequence:
Predicted median insert size:
Programs:
Metrics
-------
Read Mapping Metrics
--------------------
Total reads: 1040
Total problems: 194 (18.654%)
Properly paired and mapped reads: 846 (81.346%)
Secondary reads: 20 (1.923%)
Supplementary reads: 0 (0.000%)
Duplicate reads: 313 (30.096% of all reads)
Quality Indicators
------------------
Short to mononucleosomal ratio: 1.783
High quality, nonduplicate, properly paired, uniquely mapped autosomal alignments: 400
as a percentage of autosomal reads: 91.533%
as a percentage of all reads: 38.462%
Paired Read Metrics
-------------------
Paired reads: 1040 (100.000%)
Paired and mapped reads: 864 (83.077%)
FR reads: 846 (81.346154%)
First of pair: 519 (49.904%)
Second of pair: 521 (50.096%)
Forward reads: 529 (50.865%)
Reverse reads: 511 (49.135%)
Forward mate reads: 521 (50.096%)
Reverse mate reads: 519 (49.904%)
Unmapped Read Metrics
---------------------
Unmapped reads: 17 (1.635%)
Unmapped mate reads: 6 (0.577%)
Reads not passing quality controls: 0 (0.000%)
Unpaired reads: 0 (0.000%)
Reads with zero mapping quality: 111 (10.673%)
Aberrant Mapping Metrics
------------------------
RF reads: 15 (1.442308%)
FF reads: 10 (0.961538%)
RR reads: 17 (1.634615%)
Reads that paired and mapped but...
on different chromosomes: 14 (1.346%)
probably too far from their mates: 4 (0.385%) (longest proper fragment seems to be 649)
just not properly: 0 (0.000%)
Autosomal/Mitochondrial Metrics
-------------------------------
Total autosomal reads: 437 (42.019% of all reads)
Total mitochondrial reads: 369 (35.481% of all reads)
Duplicate autosomal reads: 35 (8.009% of all autosomal reads)
Duplicate mitochondrial reads: 185 (50.136% of all mitochondrial reads)
Mapping Quality
---------------
Mean MAPQ: 47.538
Median MAPQ: 60.000
Reads with MAPQ >=...
5: 888 (85.385%)
10: 884 (85.000%)
15: 881 (84.712%)
20: 878 (84.423%)
25: 877 (84.327%)
30: 837 (80.481%)
Peak Metrics
------------
Peak count: 37276
High quality autosomal alignments that overlapped peaks: 115 (28.750% of all high quality autosomal alignments)
Number of high quality autosomal alignments overlapping the top 10,000 peaks:
Top peak: 2 (0.500% of all high quality autosomal alignments)
Top 10 peaks: 20 (5.000% of all high quality autosomal alignments)
Top 100 peaks: 115 (28.750% of all high quality autosomal alignments)
Top 1000 peaks: 115 (28.750% of all high quality autosomal alignments)
Top 10,000 peaks: 115 (28.750% of all high quality autosomal alignments)
Read 411 excluded regions from exclude.dac.bed.gz.
Read 1649 excluded regions from exclude.duke.bed.gz.
Collecting metrics from test.bam.
Logging problematic reads to Test collector.problems.
Loading peaks for read group Test collector from notthere.peaks.gz.
Read 411 excluded regions from exclude.dac.bed.gz.
Read 1649 excluded regions from exclude.duke.bed.gz.
Loading TSS file 'notthere.bed.gz'.
===============================================================================
All tests passed (241 assertions in 54 test cases)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -- prefix=/usr
make -j4 install DESTDIR=/<<BUILDDIR>>/ataqv-1.3.1\+ds/debian/ataqv AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" prefix=/usr
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Installing to /usr
install -d -m 0755 /<<PKGBUILDDIR>>/debian/ataqv/usr/bin
install -d -m 0755 /<<PKGBUILDDIR>>/debian/ataqv/usr/bin
install -d -m 0755 /<<PKGBUILDDIR>>/debian/ataqv/usr/share/ataqv/web
install -m 0755 build/ataqv /<<PKGBUILDDIR>>/debian/ataqv/usr/bin
for f in src/scripts/make_ataqv_pipeline src/scripts/mkarv src/scripts/run_ataqv_example src/scripts/srvarv; do sed -e 's/{{VERSION}}/1.3.1/g' $f > build/$(basename $f); install -m 0755 build/$(basename $f) /<<PKGBUILDDIR>>/debian/ataqv/usr/bin; done
cp -a src/web/* /<<PKGBUILDDIR>>/debian/ataqv/usr/share/ataqv/web
find /<<PKGBUILDDIR>>/debian/ataqv/usr/share/ataqv/web -type d -exec chmod 755 {} \;
find /<<PKGBUILDDIR>>/debian/ataqv/usr/share/ataqv/web -type f -exec chmod 644 {} \;
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
help2man --no-info --name="QC metrics for ATAC-seq data" build/ataqv > debian/ataqv.1
help2man --no-info --name="Turns ataqv results into a web app" src/scripts/mkarv > debian/mkarv.1
help2man --no-info --name="serve an instance of the ataqv web results viewer" --version-string 1.3.1+ds src/scripts/srvarv > debian/srvarv.1
dh_installman
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/ataqv/usr/bin/ataqv contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ataqv/usr/lib/ataqv/run_ataqv_tests contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'ataqv-dbgsym' in '../ataqv-dbgsym_1.3.1+ds-2_armhf.deb'.
dpkg-deb: building package 'ataqv' in '../ataqv_1.3.1+ds-2_armhf.deb'.
dpkg-genbuildinfo --build=any -O../ataqv_1.3.1+ds-2_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian pi5 test autobuilder <root@raspbian.org> -O../ataqv_1.3.1+ds-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-12-18T05:36:25Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ataqv_1.3.1+ds-2_armhf.changes:
-------------------------------
Format: 1.8
Date: Thu, 14 Dec 2023 22:46:56 +0700
Source: ataqv
Binary: ataqv ataqv-dbgsym
Architecture: armhf
Version: 1.3.1+ds-2
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian pi5 test autobuilder <root@raspbian.org>
Changed-By: Lance Lin <lq27267@gmail.com>
Description:
ataqv - ATAC-seq QC and visualization
Closes: 1044021 1049553
Changes:
ataqv (1.3.1+ds-2) unstable; urgency=medium
.
* Team upload.
* d/clean: Clean files copied during configure (Closes: #1044021, #1049553)
Checksums-Sha1:
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Files:
35908ecb3564208f58db05636e451576 6788940 debug optional ataqv-dbgsym_1.3.1+ds-2_armhf.deb
c34ae6cbb05901b381afa5deacbb3c11 8655 science optional ataqv_1.3.1+ds-2_armhf.buildinfo
1fcdc8471990b47e6533ce979477b037 3316056 science optional ataqv_1.3.1+ds-2_armhf.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: ataqv
Binary: ataqv ataqv-dbgsym
Architecture: armhf
Version: 1.3.1+ds-2
Checksums-Md5:
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Checksums-Sha1:
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Checksums-Sha256:
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6ba5b328c56a878d23baff36c7e8cc5849deb7f3b003e51f35634e50a7fe49e0 3316056 ataqv_1.3.1+ds-2_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Mon, 18 Dec 2023 05:36:24 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
autoconf (= 2.71-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.21-14),
autotools-dev (= 20220109.1),
base-files (= 13+rpi1),
base-passwd (= 3.6.2),
bash (= 5.2.15-2),
binutils (= 2.41-6+rpi1),
binutils-arm-linux-gnueabihf (= 2.41-6+rpi1),
binutils-common (= 2.41-6+rpi1),
bsdextrautils (= 2.39.3-2),
bsdutils (= 1:2.39.3-2),
build-essential (= 12.9),
bzip2 (= 1.0.8-5+b2),
coreutils (= 9.1-1),
cpp (= 4:13.2.0-1+rpi1),
cpp-12 (= 12.3.0-10+rpi1),
cpp-13 (= 13.2.0-5+rpi1),
dash (= 0.5.12-6),
debconf (= 1.5.82),
debhelper (= 13.11.8),
debianutils (= 5.14),
dh-autoreconf (= 20),
dh-strip-nondeterminism (= 1.13.1-1),
diffutils (= 1:3.10-1),
dpkg (= 1.22.1+rpi1),
dpkg-dev (= 1.22.1+rpi1),
dwz (= 0.15-1),
file (= 1:5.45-2),
findutils (= 4.9.0-5),
fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1),
g++ (= 4:13.2.0-1+rpi1),
g++-13 (= 13.2.0-5+rpi1),
gcc (= 4:13.2.0-1+rpi1),
gcc-12 (= 12.3.0-10+rpi1),
gcc-12-base (= 12.3.0-10+rpi1),
gcc-13 (= 13.2.0-5+rpi1),
gcc-13-base (= 13.2.0-5+rpi1),
gettext (= 0.21-14),
gettext-base (= 0.21-14),
grep (= 3.11-3),
groff-base (= 1.23.0-3),
gzip (= 1.12-1),
help2man (= 1.49.3),
hostname (= 3.23+nmu1),
icu-devtools (= 72.1-4),
init-system-helpers (= 1.65.2),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.1-3),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 13.2.0-5+rpi1),
libatomic1 (= 13.2.0-5+rpi1),
libattr1 (= 1:2.5.1-4),
libaudit-common (= 1:3.1.1-1),
libaudit1 (= 1:3.1.1-1),
libbinutils (= 2.41-6+rpi1),
libblkid1 (= 2.39.3-2),
libboost-chrono-dev (= 1.74.0.3+b4),
libboost-chrono1.74-dev (= 1.74.0+ds1-23),
libboost-chrono1.74.0 (= 1.74.0+ds1-23),
libboost-filesystem-dev (= 1.74.0.3+b4),
libboost-filesystem1.74-dev (= 1.74.0+ds1-23),
libboost-filesystem1.74.0 (= 1.74.0+ds1-23),
libboost-iostreams-dev (= 1.74.0.3+b4),
libboost-iostreams1.74-dev (= 1.74.0+ds1-23),
libboost-iostreams1.74.0 (= 1.74.0+ds1-23),
libboost-regex1.74-dev (= 1.74.0+ds1-23),
libboost-regex1.74.0 (= 1.74.0+ds1-23),
libboost-system-dev (= 1.74.0.3+b4),
libboost-system1.74-dev (= 1.74.0+ds1-23),
libboost-system1.74.0 (= 1.74.0+ds1-23),
libboost1.74-dev (= 1.74.0+ds1-23),
libbrotli1 (= 1.1.0-2),
libbz2-1.0 (= 1.0.8-5+b2),
libc-bin (= 2.37-12+rpi2),
libc-dev-bin (= 2.37-12+rpi2),
libc6 (= 2.37-12+rpi2),
libc6-dev (= 2.37-12+rpi2),
libcap-ng0 (= 0.8.3-1+b1),
libcap2 (= 1:2.66-4),
libcc1-0 (= 13.2.0-5+rpi1),
libcom-err2 (= 1.47.0-2),
libcrypt-dev (= 1:4.4.36-2),
libcrypt1 (= 1:4.4.36-2),
libctf-nobfd0 (= 2.41-6+rpi1),
libctf0 (= 2.41-6+rpi1),
libcurl3-gnutls (= 8.4.0-2+rpi1),
libcurl4-gnutls-dev (= 8.4.0-2+rpi1),
libdb5.3 (= 5.3.28+dfsg2-2),
libdebconfclient0 (= 0.271),
libdebhelper-perl (= 13.11.8),
libdeflate-dev (= 1.18-1),
libdeflate0 (= 1.18-1),
libdpkg-perl (= 1.22.1+rpi1),
libelf1 (= 0.188-2.1+rpi1),
libexpat1 (= 2.5.0-2),
libffi8 (= 3.4.4-1),
libfile-stripnondeterminism-perl (= 1.13.1-1),
libgcc-12-dev (= 12.3.0-10+rpi1),
libgcc-13-dev (= 13.2.0-5+rpi1),
libgcc-s1 (= 13.2.0-5+rpi1),
libgcrypt20 (= 1.10.2-3),
libgdbm-compat4 (= 1.23-3),
libgdbm6 (= 1.23-3),
libgmp10 (= 2:6.3.0+dfsg-2),
libgnutls30 (= 3.8.1-4),
libgomp1 (= 13.2.0-5+rpi1),
libgpg-error0 (= 1.47-2),
libgssapi-krb5-2 (= 1.20.1-4),
libhogweed6 (= 3.9.1-2),
libhts-dev (= 1.18+ds-1),
libhts3 (= 1.18+ds-1),
libhtscodecs2 (= 1.5.2-1),
libicu-dev (= 72.1-4),
libicu72 (= 72.1-4),
libidn2-0 (= 2.3.4-1),
libisl23 (= 0.26-3),
libjansson4 (= 2.14-2),
libjs-d3-format (= 1:1.4.5+~1.4.2-2),
libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
libjs-jquery-datatables (= 1.11.5+dfsg-2),
libjs-jquery-datatables-extensions (= 0.0+git20150910.28fd64e+dfsg-5),
libk5crypto3 (= 1.20.1-4),
libkeyutils1 (= 1.6.3-2),
libkrb5-3 (= 1.20.1-4),
libkrb5support0 (= 1.20.1-4),
libldap-2.5-0 (= 2.5.13+dfsg-5+rpi1),
liblocale-gettext-perl (= 1.07-6),
liblz4-1 (= 1.9.4-1+rpi1+b1),
liblzma-dev (= 5.4.5-0.1),
liblzma5 (= 5.4.5-0.1),
libmagic-mgc (= 1:5.45-2),
libmagic1 (= 1:5.45-2),
libmd0 (= 1.1.0-1),
libmount1 (= 2.39.3-2),
libmpc3 (= 1.3.1-1),
libmpfr6 (= 4.2.1-1),
libncurses-dev (= 6.4+20231209-1),
libncurses6 (= 6.4+20231209-1),
libncursesw6 (= 6.4+20231209-1),
libnettle8 (= 3.9.1-2),
libnghttp2-14 (= 1.58.0-1),
libnsl-dev (= 1.3.0-2),
libnsl2 (= 1.3.0-2),
libp11-kit0 (= 0.25.0-5),
libpam-modules (= 1.5.2-9.1),
libpam-modules-bin (= 1.5.2-9.1),
libpam-runtime (= 1.5.2-9.1),
libpam0g (= 1.5.2-9.1),
libpcre2-8-0 (= 10.42-4),
libperl5.36 (= 5.36.0-9),
libpipeline1 (= 1.5.7-1),
libpsl5 (= 0.21.2-1+b1),
libpython3-stdlib (= 3.11.4-5),
libpython3.11-minimal (= 3.11.7-2),
libpython3.11-stdlib (= 3.11.7-2),
libreadline8 (= 8.2-1.3),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
libsasl2-2 (= 2.1.28+dfsg1-3),
libsasl2-modules-db (= 2.1.28+dfsg1-3),
libseccomp2 (= 2.5.4-1+rpi1+b1),
libselinux1 (= 3.5-1),
libsframe1 (= 2.41-6+rpi1),
libsmartcols1 (= 2.39.3-2),
libsqlite3-0 (= 3.43.2-1),
libssh2-1 (= 1.11.0-3),
libssl3 (= 3.0.11-1),
libstdc++-12-dev (= 12.3.0-10+rpi1),
libstdc++-13-dev (= 13.2.0-5+rpi1),
libstdc++6 (= 13.2.0-5+rpi1),
libsub-override-perl (= 0.10-1),
libsystemd0 (= 254.5-1+rpi1),
libtasn1-6 (= 4.19.0-3),
libtinfo6 (= 6.4+20231209-1),
libtirpc-common (= 1.3.3+ds-1),
libtirpc-dev (= 1.3.3+ds-1),
libtirpc3 (= 1.3.3+ds-1),
libtool (= 2.4.7-7),
libubsan1 (= 13.2.0-5+rpi1),
libuchardet0 (= 0.0.8-1),
libudev1 (= 254.5-1+rpi1),
libunistring5 (= 1.1-2),
libuuid1 (= 2.39.3-2),
libxml2 (= 2.9.14+dfsg-1.3),
libzstd1 (= 1.5.5+dfsg2-2),
linux-libc-dev (= 6.5.6-1+rpi1),
login (= 1:4.13+dfsg1-3),
m4 (= 1.4.19-4),
make (= 4.3-4.1),
man-db (= 2.12.0-1),
mawk (= 1.3.4.20230808-1),
media-types (= 10.1.0),
ncurses-base (= 6.4+20231209-1),
ncurses-bin (= 6.4+20231209-1),
netbase (= 6.4),
node-commander (= 9.4.1-1),
node-d3 (= 5.16.0+~cs5.28.10-1),
node-d3-array (= 3.2.0+~cs5.0.6-2),
node-d3-axis (= 1.0.12+~1.0.16-1),
node-d3-brush (= 1.1.6+~1.1.5-1),
node-d3-chord (= 1.0.6+~1.0.11-1),
node-d3-collection (= 1.0.7+~1.0.10-1),
node-d3-color (= 1.4.1+~1.4.2-1),
node-d3-contour (= 1.3.2+~1.3.3-1),
node-d3-dispatch (= 1.0.6+~1.0.9-1),
node-d3-drag (= 1.2.5+~1.2.5-1),
node-d3-dsv (= 1.2.0+~1.2.3-1),
node-d3-ease (= 1.0.7+~1.0.11-1),
node-d3-fetch (= 1.2.0+~1.2.2-1),
node-d3-force (= 2.1.1+~2.1.4-1),
node-d3-format (= 1:1.4.5+~1.4.2-2),
node-d3-geo (= 1.12.1+~1.12.4-1),
node-d3-hierarchy (= 1.1.9+~1.1.8-1),
node-d3-interpolate (= 1.4.0+~1.4.2-1),
node-d3-path (= 1.0.9+~1.0.9-1),
node-d3-polygon (= 1.0.6+~1.0.8-1),
node-d3-quadtree (= 1.0.7+~1.0.9-1),
node-d3-queue (= 3.0.7-13),
node-d3-random (= 1.1.2+~1.1.3-1),
node-d3-scale (= 2.2.2+~2.2.6-1),
node-d3-scale-chromatic (= 1.5.0+~1.5.1-1),
node-d3-selection (= 1.4.1+~1.4.3-1),
node-d3-shape (= 1.3.7+~1.3.8-1),
node-d3-time (= 1.1.0+~1.1.1-1),
node-d3-time-format (= 2.3.0+~2.3.1-1),
node-d3-timer (= 1.0.10+~1.0.10-1),
node-d3-transition (= 1.3.2+~1.3.2-1),
node-d3-voronoi (= 1.1.4+~1.1.9-1),
node-d3-zoom (= 1.8.3+~1.8.4-1),
node-iconv-lite (= 0.6.3-3),
node-normalize.css (= 8.0.1-5),
node-rw (= 1.3.3-5),
node-safe-buffer (= 5.2.1+~cs2.1.2-3),
patch (= 2.7.6-7),
perl (= 5.36.0-9),
perl-base (= 5.36.0-9),
perl-modules-5.36 (= 5.36.0-9),
po-debconf (= 1.0.21+nmu1),
python3 (= 3.11.4-5),
python3-minimal (= 3.11.4-5),
python3.11 (= 3.11.7-2),
python3.11-minimal (= 3.11.7-2),
readline-common (= 8.2-1.3),
rpcsvc-proto (= 1.4.3-1),
sed (= 4.9-1),
sensible-utils (= 0.0.20),
sysvinit-utils (= 3.08-3),
tar (= 1.34+dfsg-1.2),
tzdata (= 2023c-10),
usr-is-merged (= 37),
util-linux (= 2.39.3-2),
xz-utils (= 5.4.5-0.1),
zlib1g (= 1:1.2.13.dfsg-3),
zlib1g-dev (= 1:1.2.13.dfsg-3)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="C.UTF-8"
LC_COLLATE="C.UTF-8"
SOURCE_DATE_EPOCH="1702568816"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ataqv-dbgsym_1.3.1+ds-2_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 6788940 bytes: control archive=640 bytes.
410 bytes, 12 lines control
297 bytes, 3 lines md5sums
Package: ataqv-dbgsym
Source: ataqv
Version: 1.3.1+ds-2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 7063
Depends: ataqv (= 1.3.1+ds-2)
Section: debug
Priority: optional
Description: debug symbols for ataqv
Build-Ids: 187552e8cd37e4aa35b8832545b5f8afa77c55da 59b392eb1085fa6e1863bf37377736b5f7b5184f
drwxr-xr-x root/root 0 2023-12-14 15:46 ./
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/debug/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/debug/.build-id/18/
-rw-r--r-- root/root 1894356 2023-12-14 15:46 ./usr/lib/debug/.build-id/18/7552e8cd37e4aa35b8832545b5f8afa77c55da.debug
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/debug/.build-id/59/
-rw-r--r-- root/root 4627300 2023-12-14 15:46 ./usr/lib/debug/.build-id/59/b392eb1085fa6e1863bf37377736b5f7b5184f.debug
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 696332 2023-12-14 15:46 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/ataqv.debug
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/doc/ataqv-dbgsym -> ataqv
ataqv_1.3.1+ds-2_armhf.deb
--------------------------
new Debian package, version 2.0.
size 3316056 bytes: control archive=1768 bytes.
979 bytes, 16 lines control
2422 bytes, 32 lines md5sums
Package: ataqv
Version: 1.3.1+ds-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 6211
Depends: libboost-chrono1.74.0 (>= 1.74.0+ds1), libboost-filesystem1.74.0 (>= 1.74.0+ds1), libboost-iostreams1.74.0 (>= 1.74.0+ds1), libc6 (>= 2.34), libgcc-s1 (>= 3.5), libhts3 (>= 1.17), libncurses6 (>= 6), libstdc++6 (>= 13.1), libjs-jquery, libjs-jquery-datatables, libjs-jquery-datatables-extensions, fonts-font-awesome, node-normalize.css, python3, node-d3
Suggests: picard-tools, samtools, macs, wget
Section: science
Priority: optional
Homepage: https://github.com/ParkerLab/ataqv/
Description: ATAC-seq QC and visualization
A toolkit for measuring and comparing ATAC-seq results, made in the
Parker lab at the University of Michigan. They wrote it to help
understand how well their ATAC-seq assays had worked, and to make it
easier to spot differences that might be caused by library prep or
sequencing.
drwxr-xr-x root/root 0 2023-12-14 15:46 ./
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/bin/
-rwxr-xr-x root/root 436216 2023-12-14 15:46 ./usr/bin/ataqv
-rwxr-xr-x root/root 3020 2023-12-14 15:46 ./usr/bin/make_ataqv_pipeline
-rwxr-xr-x root/root 36049 2023-12-14 15:46 ./usr/bin/mkarv
-rwxr-xr-x root/root 1634 2023-12-14 15:46 ./usr/bin/run_ataqv_example
-rwxr-xr-x root/root 1142 2023-12-14 15:46 ./usr/bin/srvarv
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/lib/ataqv/
-rwxr-xr-x root/root 948296 2023-12-14 15:46 ./usr/lib/ataqv/run_ataqv_tests
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/ataqv/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/css/
-rw-r--r-- root/root 18865 2023-02-17 16:44 ./usr/share/ataqv/web/css/ataqv.css
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/css/datatables.buttons.min.css -> ../../../javascript/jquery-datatables-extensions/Buttons/css/buttons.dataTables.min.css
-rw-r--r-- root/root 3362 2023-02-17 16:44 ./usr/share/ataqv/web/css/datatables.fontawesome.css
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/css/datatables.min.css -> ../../../javascript/jquery-datatables/css/jquery.dataTables.min.css
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/css/font-awesome.min.css -> ../../../fonts-font-awesome/css/font-awesome.min.css
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/css/normalize.css -> ../../../javascript/normalize.css/normalize.css
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/FontAwesome.otf -> ../../../fonts-font-awesome/fonts/FontAwesome.otf
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/fontawesome-webfont.eot -> ../../../fonts-font-awesome/fonts/fontawesome-webfont.eot
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/fontawesome-webfont.svg -> ../../../fonts-font-awesome/fonts/fontawesome-webfont.svg
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/fontawesome-webfont.ttf -> ../../../fonts-font-awesome/fonts/fontawesome-webfont.ttf
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/fontawesome-webfont.woff -> ../../../fonts-font-awesome/fonts/fontawesome-webfont.woff
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/fonts/fontawesome-webfont.woff2 -> ../../../fonts-font-awesome/fonts/fontawesome-webfont.woff2
-rw-r--r-- root/root 34052 2023-02-17 16:44 ./usr/share/ataqv/web/fonts/sourcesanspro-regular.woff
-rw-r--r-- root/root 28724 2023-02-17 16:44 ./usr/share/ataqv/web/fonts/sourcesanspro-regularit.woff
-rw-r--r-- root/root 33848 2023-02-17 16:44 ./usr/share/ataqv/web/fonts/sourcesanspro-semibold.woff
-rw-r--r-- root/root 28624 2023-02-17 16:44 ./usr/share/ataqv/web/fonts/sourcesanspro-semiboldit.woff
-rw-r--r-- root/root 51122 2023-12-14 15:46 ./usr/share/ataqv/web/index.html
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/
-rw-r--r-- root/root 69250 2023-02-17 16:44 ./usr/share/ataqv/web/js/ataqv.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/buttons.colVis.min.js -> ../../../javascript/jquery-datatables-extensions/Buttons/js/buttons.colVis.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/buttons.html5.min.js -> ../../../javascript/jquery-datatables-extensions/Buttons/js/buttons.html5.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/buttons.print.min.js -> ../../../javascript/jquery-datatables-extensions/Buttons/js/buttons.print.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/d3.min.js -> ../../../nodejs/d3/dist/d3.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/dataTables.buttons.min.js -> ../../../javascript/jquery-datatables-extensions/Buttons/js/dataTables.buttons.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/dataTables.responsive.min.js -> ../../../javascript/jquery-datatables-extensions/Responsive/js/dataTables.responsive.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/jquery.dataTables.min.js -> ../../../javascript/jquery-datatables/jquery.dataTables.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/jquery.min.js -> ../../../javascript/jquery/jquery.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/jszip.min.js -> ../../../javascript/jquery-datatables-extensions/JSZip/jszip.min.js
lrwxrwxrwx root/root 0 2023-12-14 15:46 ./usr/share/ataqv/web/js/pdfmake.min.js -> ../../../javascript/jquery-datatables-extensions/pdfmake/build/pdfmake.min.js
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/doc/ataqv/
-rw-r--r-- root/root 6072 2023-02-17 16:44 ./usr/share/doc/ataqv/README.rst.gz
-rw-r--r-- root/root 801 2023-12-14 15:46 ./usr/share/doc/ataqv/changelog.Debian.gz
-rw-r--r-- root/root 8547 2023-12-14 15:46 ./usr/share/doc/ataqv/copyright
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/
-rw-r--r-- root/root 37149 2023-02-17 16:44 ./usr/share/doc/ataqv/examples/testdata/SRR891275.bam
-rw-r--r-- root/root 773256 2023-02-17 16:44 ./usr/share/doc/ataqv/examples/testdata/SRR891275.bam.bai
-rw-r--r-- root/root 418285 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/SRR891275.peaks.gz
-rw-r--r-- root/root 37198 2023-02-17 16:44 ./usr/share/doc/ataqv/examples/testdata/SRR891278.bam
-rw-r--r-- root/root 952573 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/SRR891278.peaks.gz
-rw-r--r-- root/root 4708 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/exclude.dac.bed.gz
-rw-r--r-- root/root 17130 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/exclude.duke.bed.gz
-rw-r--r-- root/root 288924 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/hg19.tss.refseq.bed.gz
-rwxr-xr-x root/root 2617 2023-02-17 16:44 ./usr/share/doc/ataqv/examples/testdata/mktd.sh
-rw-r--r-- root/root 72177 2023-02-17 16:44 ./usr/share/doc/ataqv/examples/testdata/test.bam
-rw-r--r-- root/root 1017208 2023-02-17 16:44 ./usr/share/doc/ataqv/examples/testdata/test.bam.bai
-rw-r--r-- root/root 968461 2023-12-14 15:46 ./usr/share/doc/ataqv/examples/testdata/test.peaks.gz
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/man/
drwxr-xr-x root/root 0 2023-12-14 15:46 ./usr/share/man/man1/
-rw-r--r-- root/root 2084 2023-12-14 15:46 ./usr/share/man/man1/ataqv.1.gz
-rw-r--r-- root/root 1631 2023-12-14 15:46 ./usr/share/man/man1/mkarv.1.gz
-rw-r--r-- root/root 381 2023-12-14 15:46 ./usr/share/man/man1/srvarv.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 102304
Build-Time: 136
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 86
Job: ataqv_1.3.1+ds-2
Machine Architecture: arm64
Package: ataqv
Package-Time: 230
Source-Version: 1.3.1+ds-2
Space: 102304
Status: successful
Version: 1.3.1+ds-2
--------------------------------------------------------------------------------
Finished at 2023-12-18T05:36:25Z
Build needed 00:03:50, 102304k disk space