ampliconnoise →
1.29-7+b1 →
armhf → 2018-05-03 02:02:44
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| ampliconnoise 1.29-7+b1 (armhf) Thu, 03 May 2018 01:51:25 +0000 |
+==============================================================================+
Package: ampliconnoise
Version: 1.29-7+b1
Source Version: 1.29-7
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-7045c6ef-df49-43c5-8a86-fd7a8ab8555f' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.5 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ampliconnoise' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/ampliconnoise.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/ampliconnoise.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1414 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main ampliconnoise 1.29-7 (dsc) [2065 B]
Get:2 http://172.17.0.1/private buster-staging/main ampliconnoise 1.29-7 (tar) [1403 kB]
Get:3 http://172.17.0.1/private buster-staging/main ampliconnoise 1.29-7 (diff) [8732 B]
Fetched 1414 kB in 1s (2196 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ampliconnoise-IH1WXr/ampliconnoise-1.29' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ampliconnoise-IH1WXr' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-OXY1x9/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-OXY1x9/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-OXY1x9/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Sources [349 B]
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Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded.
Need to get 852 B of archives.
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Get:1 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), libgsl-dev, libopenmpi-dev
Filtered Build-Depends: debhelper (>= 10), libgsl-dev, libopenmpi-dev
dpkg-deb: building package 'sbuild-build-depends-ampliconnoise-dummy' in '/<<BUILDDIR>>/resolver-OXY1x9/apt_archive/sbuild-build-depends-ampliconnoise-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-ampliconnoise-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Sources [507 B]
Get:5 copy:/<<BUILDDIR>>/resolver-OXY1x9/apt_archive ./ Packages [586 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install ampliconnoise build dependencies (apt-based resolver)
-------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
ibverbs-providers intltool-debian libarchive-zip-perl libbsd0 libcroco3
libedit2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6
libfile-stripnondeterminism-perl libgfortran4 libglib2.0-0 libgsl-dev
libgsl23 libgslcblas0 libgssapi-krb5-2 libhwloc-dev libhwloc-plugins
libhwloc5 libibverbs-dev libibverbs1 libicu57 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libltdl-dev libltdl7 libmagic-mgc libmagic1
libnl-3-200 libnl-route-3-200 libopenmpi-dev libopenmpi3 libpciaccess0
libpipeline1 libpmix2 libsigsegv2 libssl1.0.2 libtimedate-perl libtool
libxml2 m4 man-db ocl-icd-libopencl1 openmpi-bin openmpi-common
openssh-client po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff
gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user
libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd
gfortran keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales xauth libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
ibverbs-providers intltool-debian libarchive-zip-perl libbsd0 libcroco3
libedit2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6
libfile-stripnondeterminism-perl libgfortran4 libglib2.0-0 libgsl-dev
libgsl23 libgslcblas0 libgssapi-krb5-2 libhwloc-dev libhwloc-plugins
libhwloc5 libibverbs-dev libibverbs1 libicu57 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libltdl-dev libltdl7 libmagic-mgc libmagic1
libnl-3-200 libnl-route-3-200 libopenmpi-dev libopenmpi3 libpciaccess0
libpipeline1 libpmix2 libsigsegv2 libssl1.0.2 libtimedate-perl libtool
libxml2 m4 man-db ocl-icd-libopencl1 openmpi-bin openmpi-common
openssh-client po-debconf sbuild-build-depends-ampliconnoise-dummy
0 upgraded, 62 newly installed, 0 to remove and 35 not upgraded.
Need to get 18.2 MB/27.7 MB of archives.
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Get:2 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
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Get:5 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2o-1 [888 kB]
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Get:15 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
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Get:22 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
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Get:24 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
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Get:36 http://172.17.0.1/private buster-staging/main armhf libhwloc5 armhf 1.11.10-1+rpi1 [85.7 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libltdl-dev armhf 2.4.6-2.1 [158 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libhwloc-dev armhf 1.11.10-1+rpi1 [141 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libhwloc-plugins armhf 1.11.10-1+rpi1 [15.4 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libibverbs-dev armhf 17.1-1 [89.8 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libpmix2 armhf 2.1.1~rc1-2 [284 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libopenmpi3 armhf 3.0.1-9+rpi1 [1725 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf openmpi-common all 3.0.1-9+rpi1 [158 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf openmpi-bin armhf 3.0.1-9+rpi1 [198 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libopenmpi-dev armhf 3.0.1-9+rpi1 [928 kB]
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No schema files found: removed existing output file.
Setting up gettext-base (0.19.8.1-6) ...
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Setting up m4 (1.4.18-1) ...
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Setting up libbsd0:armhf (0.8.7-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-6.1) ...
Setting up libmagic-mgc (1:5.32-2) ...
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Setting up libcroco3:armhf (0.6.12-2) ...
Setting up libssl1.0.2:armhf (1.0.2o-1) ...
Setting up libevent-pthreads-2.1-6:armhf (2.1.8-stable-4) ...
Setting up openmpi-common (3.0.1-9+rpi1) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Setting up autotools-dev (20180224.1) ...
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Setting up libpciaccess0:armhf (0.14-1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-1) ...
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libnl-3-200:armhf (3.2.27-2) ...
Setting up libgslcblas0:armhf (2.4+dfsg-6) ...
Setting up autopoint (0.19.8.1-6) ...
Setting up libfile-stripnondeterminism-perl (0.041-1) ...
Setting up libedit2:armhf (3.1-20170329-1) ...
Setting up libltdl-dev:armhf (2.4.6-2.1) ...
Setting up libgsl23:armhf (2.4+dfsg-6) ...
Setting up gettext (0.19.8.1-6) ...
Setting up libgsl-dev (2.4+dfsg-6) ...
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Setting up autoconf (2.69-11) ...
Setting up file (1:5.32-2) ...
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Setting up libkrb5support0:armhf (1.16-2) ...
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Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2.1) ...
Setting up libibverbs1:armhf (17.1-1) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up po-debconf (1.0.20) ...
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Setting up libkrb5-3:armhf (1.16-2) ...
Setting up libibverbs-dev:armhf (17.1-1) ...
Setting up libopenmpi3:armhf (3.0.1-9+rpi1) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up openssh-client (1:7.7p1-2) ...
Setting up openmpi-bin (3.0.1-9+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: error: no alternatives for mpi
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libopenmpi-dev:armhf (3.0.1-9+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up dh-autoreconf (17) ...
Setting up dh-strip-nondeterminism (0.041-1) ...
Setting up debhelper (11.2.1) ...
Setting up sbuild-build-depends-ampliconnoise-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-8+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-12 gcc-7_7.3.0-12 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180402-1+rpi1 linux-libc-dev_4.15.11-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.44 bash_4.4.18-2 binutils_2.30-8+rpi1 binutils-arm-linux-gnueabihf_2.30-8+rpi1 binutils-common_2.30-8+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-12 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 debconf_1.5.66 debhelper_11.2.1 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-1 e2fsprogs_1.44.1-1 e2fsprogs-l10n_1.44.1-1 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.32-2 findutils_4.6.0+git+20171230-2 g++_4:7.2.0-1d1 g++-7_7.3.0-12 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-12 gcc-7-base_7.3.0-12 gcc-8-base_8-20180402-1+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 ibverbs-providers_17.1-1 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-1.1 libasan4_7.3.0-12 libassuan0_2.5.1-2 libatomic1_8-20180402-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.30-8+rpi1 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180402-1+rpi1 libcilkrts5_7.3.0-12 libcom-err2_1.44.1-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.91-2+rpi1 libdrm2_2.4.91-2+rpi1 libedit2_3.1-20170329-1 libevent-2.1-6_2.1.8-stable-4 libevent-core-2.1-6_2.1.8-stable-4 libevent-pthreads-2.1-6_2.1.8-stable-4 libexpat1_2.2.5-3 libext2fs2_1.44.1-1 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-1 libgcc-7-dev_7.3.0-12 libgcc1_1:8-20180402-1+rpi1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran4_7.3.0-12 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180402-1+rpi1 libgpg-error0_1.28-2 libgsl-dev_2.4+dfsg-6 libgsl23_2.4+dfsg-6 libgslcblas0_2.4+dfsg-6 libgssapi-krb5-2_1.16-2 libhogweed4_3.4-1 libhwloc-dev_1.11.10-1+rpi1 libhwloc-plugins_1.11.10-1+rpi1 libhwloc5_1.11.10-1+rpi1 libibverbs-dev_17.1-1 libibverbs1_17.1-1 libicu57_57.1-9 libidn11_1.33-2.1 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-4 libjson-c3_0.12.1-1.3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblocale-gettext-perl_1.07-3+b2 libltdl-dev_2.4.6-2.1 libltdl7_2.4.6-2.1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-2 libmagic1_1:5.32-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1-1 libncursesw5_6.1-1 libnettle6_3.4-1 libnl-3-200_3.2.27-2 libnl-route-3-200_3.2.27-2 libnpth0_1.5-3 libnss-systemd_238-4 libopenmpi-dev_3.0.1-9+rpi1 libopenmpi3_3.0.1-9+rpi1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpciaccess0_0.14-1 libpcre3_2:8.39-9 libperl5.24_5.24.1-4 libperl5.26_5.26.1-5 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpmix2_2.1.1~rc1-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-4 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.0-1 libss2_1.44.1-1 libssl1.0.2_1.0.2o-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180402-1+rpi1 libsystemd0_238-4 libtasn1-6_4.13-2 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtool_2.4.6-2.1 libubsan0_7.3.0-12 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libxml2_2.9.4+dfsg1-6.1 libzstd1_1.3.3+dfsg-1+rpi1 linux-base_4.5 linux-libc-dev_4.15.11-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mount_2.31.1-0.5 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 netbase_5.4 ocl-icd-libopencl1_2.2.12-1 openmpi-bin_3.0.1-9+rpi1 openmpi-common_3.0.1-9+rpi1 openssh-client_1:7.7p1-2 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.1-5 perl-base_5.26.1-5 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-5 pinentry-curses_1.1.0-1 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.12-4 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-ampliconnoise-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018d-1 udev_238-4 util-linux_2.31.1-0.5 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Nov 13 13:57:51 2017 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ampliconnoise_1.29-7.dsc
dpkg-source: info: extracting ampliconnoise in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking ampliconnoise_1.29.orig.tar.gz
dpkg-source: info: unpacking ampliconnoise_1.29-7.debian.tar.xz
dpkg-source: info: applying fix-path-for-data.patch
dpkg-source: info: applying fix-segfault-on-non-fasta-input.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying clang-ftbfs.patch
dpkg-source: info: applying mayhem.patch
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 1.29-7+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-7045c6ef-df49-43c5-8a86-fd7a8ab8555f
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package ampliconnoise
dpkg-buildpackage: info: source version 1.29-7+b1
dpkg-buildpackage: info: source distribution buster-staging
dpkg-source --before-build ampliconnoise-1.29
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_auto_clean
make -j4 -Oline clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd FCluster && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
rm -rf *o FCluster
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd FastaUnique && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
rm -rf *.o FastaUnique
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd NDist && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
rm -rf *.o NDist
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroDist && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
rm -rf *.o PyroDist
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroNoise && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
rm -rf *.o PyroNoise
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroNoiseM && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
rm -rf *.o PyroNoiseM
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroNoiseA && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
rm -rf *.o PyroNoiseA
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SeqDist && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
rm -rf *.o SeqDist
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SeqNoise && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
rm -rf *.o SeqNoise
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SplitClusterEven && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
rm -rf *.o SplitClusterEven
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SplitClusterClust && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
rm -rf *.o SplitClusterClust
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd Perseus && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
rm -rf *.o Perseus
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PerseusD && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
rm -rf *.o PerseusD
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd bin && rm -rf *)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean
rm -f *.o
rm -f *.1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 -Oline
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd FCluster && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c FCluster.c
FCluster.c:223:1: warning: return type defaults to 'int' [-Wimplicit-int]
UpdateMinCacheForMarkedRows(struct t_Min* asMin,float** aafDistMatrix,int nN)
^~~~~~~~~~~~~~~~~~~~~~~~~~~
FCluster.c: In function 'UpdateMinCacheForMarkedRows':
FCluster.c:230:13: warning: implicit declaration of function 'UpdateMinCacheForRow'; did you mean 'UpdateMinCacheForMarkedRows'? [-Wimplicit-function-declaration]
UpdateMinCacheForRow(asMin,i,aafDistMatrix);
^~~~~~~~~~~~~~~~~~~~
UpdateMinCacheForMarkedRows
FCluster.c: At top level:
FCluster.c:237:1: warning: return type defaults to 'int' [-Wimplicit-int]
UpdateMinCacheForRow(struct t_Min* asMin,int i,float** aafDistMatrix)
^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
cc -Wl,-z,relro -Wl,-z,now -o FCluster FCluster.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd FastaUnique && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c FastaUnique.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
cc -Wl,-z,relro -Wl,-z,now -o FastaUnique FastaUnique.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd NDist && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
mpicc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c NDist.c
NDist.c: In function 'readData':
NDist.c:707:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
mpicc -Wl,-z,relro -Wl,-z,now -o NDist NDist.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroDist && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
mpicc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PyroDist.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
mpicc -Wl,-z,relro -Wl,-z,now -o PyroDist PyroDist.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroNoise && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
mpicc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PyroNoise.c
PyroNoise.c: In function 'writeCentroids':
PyroNoise.c:2073:21: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
mpicc -Wl,-z,relro -Wl,-z,now -o PyroNoise PyroNoise.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SeqDist && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
mpicc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SeqDist.c
SeqDist.c: In function 'readData':
SeqDist.c:854:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
mpicc -Wl,-z,relro -Wl,-z,now -o SeqDist SeqDist.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroNoiseM && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
mpicc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PyroNoiseM.c
PyroNoiseM.c: In function 'writeCentroids':
PyroNoiseM.c:2139:21: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
mpicc -Wl,-z,relro -Wl,-z,now -o PyroNoiseM PyroNoiseM.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PyroNoiseA && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
mpicc -O3 -c PyroNoiseA.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
mpicc -o PyroNoiseA PyroNoiseA.o -lm -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SeqNoise && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
mpicc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SeqNoise.c
SeqNoise.c: In function 'main':
SeqNoise.c:120:25: warning: too many arguments for format [-Wformat-extra-args]
if(bVerbose){printf("%d: Broadcast distance matrix\n", rank, nSize, nPacket); fflush(stdout);}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SeqNoise.c: In function 'readData':
SeqNoise.c:652:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
mpicc -Wl,-z,relro -Wl,-z,now -o SeqNoise SeqNoise.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SplitClusterEven && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SplitClusterEven.c
SplitClusterEven.c: In function 'readMapFile':
SplitClusterEven.c:681:19: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Failed to open map file\n", szMapFile);
^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
cc -Wl,-z,relro -Wl,-z,now -o SplitClusterEven SplitClusterEven.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd SplitClusterClust && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SplitClusterClust.c
SplitClusterClust.c: In function 'readMapFile':
SplitClusterClust.c:316:19: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Failed to open map file\n", szMapFile);
^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
gcc -Wl,-z,relro -Wl,-z,now -o SplitClusterClust SplitClusterClust.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd Perseus && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c Perseus.c
Perseus.c: In function 'readData':
Perseus.c:856:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
cc -Wl,-z,relro -Wl,-z,now -o Perseus Perseus.o -lm -lgsl -lgslcblas
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd PerseusD && CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PerseusD.c
PerseusD.c: In function 'readData':
PerseusD.c:908:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
linking...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
cc -Wl,-z,relro -Wl,-z,now -o PerseusD PerseusD.o -lm -lgsl -lgslcblas
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make install
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp FCluster/FCluster bin
cp FastaUnique/FastaUnique bin
cp NDist/NDist bin
cp PyroDist/PyroDist bin
cp PyroNoise/PyroNoise bin
cp PyroNoiseM/PyroNoiseM bin
cp PyroNoiseA/PyroNoiseA bin
cp SeqDist/SeqDist bin
cp SeqNoise/SeqNoise bin
cp SplitClusterEven/SplitClusterEven bin
cp SplitClusterClust/SplitClusterClust bin
cp Perseus/Perseus bin
cp PerseusD/PerseusD bin
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install bin/* /usr/bin
dh_install Data/* /usr/share/ampliconnoise/Data/
dh_install Scripts/* /usr/share/ampliconnoise/Scripts/
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
debian/ampliconnoise.pod
pod2man -c AmpliconNoise Documentation debian/ampliconnoise.pod > ampliconnoise.1
dh_installman ampliconnoise.1
( for f in bin/* ; do \
ln -s ampliconnoise.1 debian/ampliconnoise/usr/share/man/man1/`basename "$f"`.1 ; \
done )
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ampliconnoise/usr/bin/Perseus debian/ampliconnoise/usr/bin/FCluster debian/ampliconnoise/usr/bin/PyroNoiseM debian/ampliconnoise/usr/bin/SeqNoise debian/ampliconnoise/usr/bin/PerseusD debian/ampliconnoise/usr/bin/PyroNoise debian/ampliconnoise/usr/bin/SplitClusterEven debian/ampliconnoise/usr/bin/NDist debian/ampliconnoise/usr/bin/FastaUnique debian/ampliconnoise/usr/bin/PyroDist debian/ampliconnoise/usr/bin/SeqDist debian/ampliconnoise/usr/bin/SplitClusterClust were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ampliconnoise/usr/bin/Perseus debian/ampliconnoise/usr/bin/PerseusD were not linked against libgslcblas.so.0 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: package ampliconnoise: unused substitution variable ${perl:Depends}
dpkg-gencontrol: warning: package ampliconnoise: unused substitution variable ${perl:Depends}
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'ampliconnoise' in '../ampliconnoise_1.29-7+b1_armhf.deb'.
dpkg-deb: building package 'ampliconnoise-dbgsym' in '../ampliconnoise-dbgsym_1.29-7+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../ampliconnoise_1.29-7+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build ampliconnoise-1.29
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-05-03T02:02:35Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ampliconnoise_1.29-7+b1_armhf.changes:
--------------------------------------
Format: 1.8
Date: Mon, 13 Nov 2017 14:56:48 +0100
Source: ampliconnoise (1.29-7)
Binary: ampliconnoise
Binary-Only: yes
Architecture: armhf
Version: 1.29-7+b1
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
ampliconnoise - removal of noise from 454 sequenced PCR amplicons
Changes:
ampliconnoise (1.29-7+b1) buster-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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Checksums-Sha256:
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Files:
212ace7d7363356e7646be21634f10f7 259752 debug optional ampliconnoise-dbgsym_1.29-7+b1_armhf.deb
a15077f474a94bbfe79d406fc4adc08e 5917 science optional ampliconnoise_1.29-7+b1_armhf.buildinfo
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ampliconnoise-dbgsym_1.29-7+b1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 259752 bytes: control archive=1144 bytes.
899 bytes, 12 lines control
1378 bytes, 13 lines md5sums
Package: ampliconnoise-dbgsym
Source: ampliconnoise (1.29-7)
Version: 1.29-7+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 367
Depends: ampliconnoise (= 1.29-7+b1)
Section: debug
Priority: optional
Description: debug symbols for ampliconnoise
Build-Ids: 0aae791e9fbe60fb3b86cdb9270f68f29b5cfcd1 1a261b4eb085eacbfb8ee6ba5412f0458a00e37c 29eb631a64f3081ca40e8db46834bd4c9e7293ff 352962e4f534279b8f7b614967a670fd9337d5c9 36b7792ade0ce7981b7d4a488fe6ecc42a5a8411 4acf1c323468e21b3f24b33167dcd547e03fe8b7 61bc6ba3a97830015a41f2d46727d53292da0b8d 6b952aac4e90566ef9aaea1cd89e6f670697f107 75b9cec19a34b3c6e030bc455425d5c838864de0 92423d2ea72c40d0c5561407eff415efdbd2c0a1 96df87e761d67fabb76d5562440d5e373e06001f eab8a56bfa1d89defe51fb3b6e06b31ca7d78263 fb3b408fb62db25a5128bad6172cdeaeb59fb3b7
drwxr-xr-x root/root 0 2017-11-13 13:56 ./
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/
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-rw-r--r-- root/root 10464 2017-11-13 13:56 ./usr/lib/debug/.build-id/0a/ae791e9fbe60fb3b86cdb9270f68f29b5cfcd1.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/1a/
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drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/29/
-rw-r--r-- root/root 21768 2017-11-13 13:56 ./usr/lib/debug/.build-id/29/eb631a64f3081ca40e8db46834bd4c9e7293ff.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/35/
-rw-r--r-- root/root 34064 2017-11-13 13:56 ./usr/lib/debug/.build-id/35/2962e4f534279b8f7b614967a670fd9337d5c9.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/36/
-rw-r--r-- root/root 51152 2017-11-13 13:56 ./usr/lib/debug/.build-id/36/b7792ade0ce7981b7d4a488fe6ecc42a5a8411.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/4a/
-rw-r--r-- root/root 33436 2017-11-13 13:56 ./usr/lib/debug/.build-id/4a/cf1c323468e21b3f24b33167dcd547e03fe8b7.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/61/
-rw-r--r-- root/root 12680 2017-11-13 13:56 ./usr/lib/debug/.build-id/61/bc6ba3a97830015a41f2d46727d53292da0b8d.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/6b/
-rw-r--r-- root/root 16248 2017-11-13 13:56 ./usr/lib/debug/.build-id/6b/952aac4e90566ef9aaea1cd89e6f670697f107.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/75/
-rw-r--r-- root/root 41068 2017-11-13 13:56 ./usr/lib/debug/.build-id/75/b9cec19a34b3c6e030bc455425d5c838864de0.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/92/
-rw-r--r-- root/root 19268 2017-11-13 13:56 ./usr/lib/debug/.build-id/92/423d2ea72c40d0c5561407eff415efdbd2c0a1.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/96/
-rw-r--r-- root/root 21052 2017-11-13 13:56 ./usr/lib/debug/.build-id/96/df87e761d67fabb76d5562440d5e373e06001f.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/ea/
-rw-r--r-- root/root 12208 2017-11-13 13:56 ./usr/lib/debug/.build-id/ea/b8a56bfa1d89defe51fb3b6e06b31ca7d78263.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/lib/debug/.build-id/fb/
-rw-r--r-- root/root 20192 2017-11-13 13:56 ./usr/lib/debug/.build-id/fb/3b408fb62db25a5128bad6172cdeaeb59fb3b7.debug
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/doc/ampliconnoise-dbgsym -> ampliconnoise
ampliconnoise_1.29-7+b1_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 444224 bytes: control archive=2588 bytes.
935 bytes, 23 lines control
4986 bytes, 68 lines md5sums
Package: ampliconnoise
Source: ampliconnoise (1.29-7)
Version: 1.29-7+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1259
Depends: libc6 (>= 2.4), libgsl23, libgslcblas0, libopenmpi3, mafft
Recommends: openmpi-bin
Section: science
Priority: optional
Homepage: http://code.google.com/p/ampliconnoise/
Description: removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput
sequence data. It consists of three main parts:
.
Pyronoise - does flowgram-based clustering to spot misreads
SeqNoise - removes PCR point mutations
Perseus - removes PCR chimeras without the need for a set of reference
sequences
.
Previously there was a standalone "Pyronoise" by the same authors and
this package includes an updated version. There is also a "Denoiser"
in Qiime which is related but distinct.
drwxr-xr-x root/root 0 2017-11-13 13:56 ./
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/bin/
-rwxr-xr-x root/root 17876 2017-11-13 13:56 ./usr/bin/FCluster
-rwxr-xr-x root/root 9720 2017-11-13 13:56 ./usr/bin/FastaUnique
-rwxr-xr-x root/root 13800 2017-11-13 13:56 ./usr/bin/NDist
-rwxr-xr-x root/root 30176 2017-11-13 13:56 ./usr/bin/Perseus
-rwxr-xr-x root/root 30176 2017-11-13 13:56 ./usr/bin/PerseusD
-rwxr-xr-x root/root 17876 2017-11-13 13:56 ./usr/bin/PyroDist
-rwxr-xr-x root/root 50644 2017-11-13 13:56 ./usr/bin/PyroNoise
-rwxr-xr-x root/root 50596 2017-11-13 13:56 ./usr/bin/PyroNoiseA
-rwxr-xr-x root/root 50644 2017-11-13 13:56 ./usr/bin/PyroNoiseM
-rwxr-xr-x root/root 17880 2017-11-13 13:56 ./usr/bin/SeqDist
-rwxr-xr-x root/root 38360 2017-11-13 13:56 ./usr/bin/SeqNoise
-rwxr-xr-x root/root 9684 2017-11-13 13:56 ./usr/bin/SplitClusterClust
-rwxr-xr-x root/root 17876 2017-11-13 13:56 ./usr/bin/SplitClusterEven
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/ampliconnoise/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/ampliconnoise/Data/
-rw-r--r-- root/root 140066 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/LookUp.dat
-rw-r--r-- root/root 140432 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/LookUp_E123.dat
-rw-r--r-- root/root 140348 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/LookUp_Titanium.dat
-rw-r--r-- root/root 156 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/Tran.dat
-rw-r--r-- root/root 44 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/TranN.dat
-rw-r--r-- root/root 156 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/Tran_D.dat
-rw-r--r-- root/root 150 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/Tran_V6.dat
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/ampliconnoise/Scripts/
-rwxr-xr-x root/root 1726 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CSV.pl
-rwxr-xr-x root/root 645 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Class.pl
-rwxr-xr-x root/root 130 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Clean.sh
-rwxr-xr-x root/root 1954 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Clean360.pl
-rwxr-xr-x root/root 2604 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanAcyclic.pl
-rwxr-xr-x root/root 2554 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanBoth.pl
-rwxr-xr-x root/root 2460 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanBothM.pl
-rwxr-xr-x root/root 2468 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanMinMax.pl
-rwxr-xr-x root/root 133 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanMinMax.sh
-rwxr-xr-x root/root 751 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/ConvertDatFasta.pl
-rwxr-xr-x root/root 268 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CountFasta.pl
-rwxr-xr-x root/root 185 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CountSequences.pl
-rwxr-xr-x root/root 1335 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Diversity.pl
-rwxr-xr-x root/root 896 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/FilterGoodClass.pl
-rwxr-xr-x root/root 3001 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/FlowsFA.pl
-rwxr-xr-x root/root 3008 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/FlowsFA360.pl
-rwxr-xr-x root/root 3117 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/FlowsMinMax.pl
-rwxr-xr-x root/root 495 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Join.pl
-rwxr-xr-x root/root 789 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Map.pl
-rwxr-xr-x root/root 374 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/MedianS.sh
-rwxr-xr-x root/root 671 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Parse.pl
-rwxr-xr-x root/root 687 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/ParseBoth.pl
-rwxr-xr-x root/root 1901 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Qiime.pl
-rwxr-xr-x root/root 2772 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Qiime_OTU.pl
-rwxr-xr-x root/root 1746 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Qiime_Typical.pl
-rwxr-xr-x root/root 11538 2013-08-01 14:50 ./usr/share/ampliconnoise/Scripts/RunBoth.sh
-rwxr-xr-x root/root 11534 2013-08-01 14:54 ./usr/share/ampliconnoise/Scripts/RunBothFLX.sh
-rwxr-xr-x root/root 11195 2013-08-01 14:40 ./usr/share/ampliconnoise/Scripts/RunFLX.sh
-rwxr-xr-x root/root 11259 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/RunTitanium.sh
-rwxr-xr-x root/root 11259 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/RunTitaniumA.sh
-rwxr-xr-x root/root 14461 2013-08-01 14:40 ./usr/share/ampliconnoise/Scripts/RunTitaniumFast.sh
-rwxr-xr-x root/root 13951 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/RunTitaniumWeb.sh
-rwxr-xr-x root/root 967 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Split.pl
-rwxr-xr-x root/root 3580 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/SplitKeys.pl
-rwxr-xr-x root/root 3440 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/SplitKeysBoth.pl
-rwxr-xr-x root/root 2839 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/SplitKeysFlower.pl
-rwxr-xr-x root/root 538 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Sub.pl
-rwxr-xr-x root/root 320 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Subsample.sh
-rwxr-xr-x root/root 699 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/SubsampleDat.pl
-rwxr-xr-x root/root 225 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Truncate.pl
-rwxr-xr-x root/root 1747 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Typical.pl
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/doc-base/
-rw-r--r-- root/root 808 2017-11-13 13:56 ./usr/share/doc-base/ampliconnoise
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/doc/ampliconnoise/
-rw-r--r-- root/root 306514 2013-08-01 14:53 ./usr/share/doc/ampliconnoise/Doc.pdf
-rw-r--r-- root/root 353 2017-11-13 13:56 ./usr/share/doc/ampliconnoise/README.Debian
-rw-r--r-- root/root 224 2017-11-13 13:56 ./usr/share/doc/ampliconnoise/changelog.Debian.armhf.gz
-rw-r--r-- root/root 2178 2017-11-13 13:56 ./usr/share/doc/ampliconnoise/changelog.Debian.gz
-rw-r--r-- root/root 1214 2017-11-13 13:56 ./usr/share/doc/ampliconnoise/copyright
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/man/
drwxr-xr-x root/root 0 2017-11-13 13:56 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/FCluster.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/FastaUnique.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/NDist.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/Perseus.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/PerseusD.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/PyroDist.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/PyroNoise.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/PyroNoiseA.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/PyroNoiseM.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/SeqDist.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/SeqNoise.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/SplitClusterClust.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2017-11-13 13:56 ./usr/share/man/man1/SplitClusterEven.1.gz -> ampliconnoise.1.gz
-rw-r--r-- root/root 2797 2017-11-13 13:56 ./usr/share/man/man1/ampliconnoise.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 11916
Build-Time: 147
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 470
Job: ampliconnoise_1.29-7
Machine Architecture: armhf
Package: ampliconnoise
Package-Time: 670
Source-Version: 1.29-7
Space: 11916
Status: successful
Version: 1.29-7+b1
--------------------------------------------------------------------------------
Finished at 2018-05-03T02:02:35Z
Build needed 00:11:10, 11916k disc space