ampliconnoise →
1.29-5+b1 →
armhf → 2016-03-10 04:15:27
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on bm-wb-04
+==============================================================================+
| ampliconnoise 1.29-5+b1 (armhf) 10 Mar 2016 04:02 |
+==============================================================================+
Package: ampliconnoise
Version: 1.29-5+b1
Source Version: 1.29-5
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/ampliconnoise-36nra1/ampliconnoise-1.29' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ampliconnoise-36nra1' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-127046fa-0b39-4308-a02b-b412c57dcda5' with '<<CHROOT>>'
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| Update chroot |
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Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8789 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.9 MB]
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NOTICE: 'ampliconnoise' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debian-med/trunk/packages/ampliconnoise/trunk/
Need to get 1414 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main ampliconnoise 1.29-5 (dsc) [2056 B]
Get:2 http://172.17.0.1/private stretch-staging/main ampliconnoise 1.29-5 (tar) [1403 kB]
Get:3 http://172.17.0.1/private stretch-staging/main ampliconnoise 1.29-5 (diff) [8328 B]
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Merged Build-Depends: build-essential, fakeroot
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dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-PC3vol/apt_archive/sbuild-build-depends-core-dummy.deb'.
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The following NEW packages will be installed:
sbuild-build-depends-core-dummy
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dpkg-deb: building package 'sbuild-build-depends-ampliconnoise-dummy' in '/<<BUILDDIR>>/resolver-JxGhYd/apt_archive/sbuild-build-depends-ampliconnoise-dummy.deb'.
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+------------------------------------------------------------------------------+
| Install ampliconnoise build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
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Building dependency tree...
Reading state information...
The following additional packages will be installed:
autotools-dev bsdmainutils cpp-5 debhelper dh-strip-nondeterminism file
g++-5 gcc-5 gcc-5-base gettext gettext-base groff-base intltool-debian
libarchive-zip-perl libasan2 libatomic1 libcc1-0 libcroco3 libffi6
libfile-stripnondeterminism-perl libgcc-5-dev libgcc1 libgfortran3
libglib2.0-0 libgomp1 libgsl-dev libgsl2 libhwloc-dev libhwloc5
libibverbs-dev libibverbs1 libicu55 libltdl-dev libltdl7 libmagic1
libopenmpi-dev libopenmpi1.10 libpipeline1 libstdc++-5-dev libstdc++6
libubsan0 libunistring0 libxml2 man-db openmpi-common po-debconf
Suggested packages:
wamerican | wordlist whois vacation gcc-5-locales dh-make gcc-5-doc
libstdc++6-5-dbg libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
libasan2-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg
libmpx0-dbg libquadmath0-dbg gettext-doc autopoint libasprintf-dev
libgettextpo-dev groff gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info
| gsl-ref-html libhwloc-contrib-plugins libtool-doc opennmpi-doc
libstdc++-5-doc less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
libhwloc-plugins libtool openmpi-bin xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autotools-dev bsdmainutils debhelper dh-strip-nondeterminism file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3
libffi6 libfile-stripnondeterminism-perl libgfortran3 libglib2.0-0
libgsl-dev libgsl2 libhwloc-dev libhwloc5 libibverbs-dev libibverbs1
libicu55 libltdl-dev libltdl7 libmagic1 libopenmpi-dev libopenmpi1.10
libpipeline1 libunistring0 libxml2 man-db openmpi-common po-debconf
sbuild-build-depends-ampliconnoise-dummy
The following packages will be upgraded:
cpp-5 g++-5 gcc-5 gcc-5-base libasan2 libatomic1 libcc1-0 libgcc-5-dev
libgcc1 libgomp1 libstdc++-5-dev libstdc++6 libubsan0
13 upgraded, 34 newly installed, 0 to remove and 61 not upgraded.
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Get:47 http://172.17.0.1/private stretch-staging/main armhf libopenmpi-dev armhf 1.10.2-8+rpi1 [625 kB]
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Preparing to unpack .../libltdl-dev_2.4.6-0.1_armhf.deb ...
Unpacking libltdl-dev:armhf (2.4.6-0.1) ...
Selecting previously unselected package libhwloc5:armhf.
Preparing to unpack .../libhwloc5_1.11.2-3_armhf.deb ...
Unpacking libhwloc5:armhf (1.11.2-3) ...
Selecting previously unselected package libhwloc-dev:armhf.
Preparing to unpack .../libhwloc-dev_1.11.2-3_armhf.deb ...
Unpacking libhwloc-dev:armhf (1.11.2-3) ...
Selecting previously unselected package libibverbs1.
Preparing to unpack .../libibverbs1_1.1.8-1.1_armhf.deb ...
Unpacking libibverbs1 (1.1.8-1.1) ...
Selecting previously unselected package libibverbs-dev.
Preparing to unpack .../libibverbs-dev_1.1.8-1.1_armhf.deb ...
Unpacking libibverbs-dev (1.1.8-1.1) ...
Selecting previously unselected package libopenmpi1.10.
Preparing to unpack .../libopenmpi1.10_1.10.2-8+rpi1_armhf.deb ...
Unpacking libopenmpi1.10 (1.10.2-8+rpi1) ...
Selecting previously unselected package openmpi-common.
Preparing to unpack .../openmpi-common_1.10.2-8+rpi1_all.deb ...
Unpacking openmpi-common (1.10.2-8+rpi1) ...
Selecting previously unselected package libopenmpi-dev.
Preparing to unpack .../libopenmpi-dev_1.10.2-8+rpi1_armhf.deb ...
Unpacking libopenmpi-dev (1.10.2-8+rpi1) ...
Selecting previously unselected package sbuild-build-depends-ampliconnoise-dummy.
Preparing to unpack .../sbuild-build-depends-ampliconnoise-dummy.deb ...
Unpacking sbuild-build-depends-ampliconnoise-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.21-7) ...
Setting up libgomp1:armhf (5.3.1-10) ...
Setting up libatomic1:armhf (5.3.1-10) ...
Setting up libasan2:armhf (5.3.1-10) ...
Setting up libubsan0:armhf (5.3.1-10) ...
Setting up cpp-5 (5.3.1-10) ...
Setting up libcc1-0:armhf (5.3.1-10) ...
Setting up libgcc-5-dev:armhf (5.3.1-10) ...
Setting up gcc-5 (5.3.1-10) ...
Setting up libstdc++-5-dev:armhf (5.3.1-10) ...
Setting up g++-5 (5.3.1-10) ...
Setting up groff-base (1.22.3-7) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.7-2) ...
Setting up libicu55:armhf (55.1-7) ...
Setting up libxml2:armhf (2.9.3+dfsg1-1) ...
Setting up autotools-dev (20150820.1) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up libglib2.0-0:armhf (2.46.2-3) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up gettext (0.19.7-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.19) ...
Setting up libarchive-zip-perl (1.56-2) ...
Setting up libfile-stripnondeterminism-perl (0.016-1) ...
Setting up libgfortran3:armhf (5.3.1-10) ...
Setting up libgsl2:armhf (2.1+dfsg-2) ...
Setting up libgsl-dev (2.1+dfsg-2) ...
Setting up libltdl7:armhf (2.4.6-0.1) ...
Setting up libltdl-dev:armhf (2.4.6-0.1) ...
Setting up libhwloc5:armhf (1.11.2-3) ...
Setting up libhwloc-dev:armhf (1.11.2-3) ...
Setting up libibverbs1 (1.1.8-1.1) ...
Setting up libibverbs-dev (1.1.8-1.1) ...
Setting up libopenmpi1.10 (1.10.2-8+rpi1) ...
Setting up openmpi-common (1.10.2-8+rpi1) ...
Setting up libopenmpi-dev (1.10.2-8+rpi1) ...
update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode
Setting up debhelper (9.20160115) ...
Setting up sbuild-build-depends-ampliconnoise-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (0.016-1) ...
Processing triggers for libc-bin (2.21-7) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26-3 dpkg-dev_1.18.4 g++-5_5.3.1-10 gcc-5_5.3.1-10 libc6-dev_2.21-7 libstdc++-4.9-dev_4.9.3-10 libstdc++-5-dev_5.3.1-10 libstdc++6_5.3.1-10 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-3 adduser_3.113+nmu3 apt_1.2.3 autotools-dev_20150820.1 base-files_9.5+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.26-3 bsdmainutils_9.0.6 bsdutils_1:2.27.1-3 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.24-1 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-10 dash_0.5.8-2.1 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20160115 debianutils_4.7 dh-strip-nondeterminism_0.016-1 diffutils_1:3.3-3 dmsetup_2:1.02.115-2 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.6.0+git+20160126-2 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-10 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-10 gcc-5-base_5.3.1-10 gettext_0.19.7-2 gettext-base_0.19.7-2 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-7 gzip_1.6-4 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5.2 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-7+rpi1 kmod_22-1 libacl1_2.2.52-3 libapparmor1_2.10-3 libapt-pkg4.12_1.0.9.10 libapt-pkg5.0_1.2.3 libarchive-zip-perl_1.56-2 libasan1_4.9.3-10 libasan2_5.3.1-10 libatomic1_5.3.1-10 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libblkid1_2.27.1-3 libbz2-1.0_1.0.6-8 libc-bin_2.21-7 libc-dev-bin_2.21-7 libc6_2.21-7 libc6-dev_2.21-7 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-10 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.204 libdevmapper1.02.1_2:1.02.115-2 libdpkg-perl_1.18.4 libdrm2_2.4.66-2 libfakeroot_1.20.2-1 libfdisk1_2.27.1-3 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.016-1 libgc1c2_1:7.4.2-7.3 libgcc-4.9-dev_4.9.3-10 libgcc-5-dev_5.3.1-10 libgcc1_1:5.3.1-10 libgcrypt20_1.6.4-5 libgdbm3_1.8.3-13.1 libgfortran3_5.3.1-10 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgomp1_5.3.1-10 libgpg-error0_1.21-1 libgsl-dev_2.1+dfsg-2 libgsl2_2.1+dfsg-2 libhwloc-dev_1.11.2-3 libhwloc5_1.11.2-3 libibverbs-dev_1.1.8-1.1 libibverbs1_1.1.8-1.1 libicu55_55.1-7 libisl15_0.16.1-1 libklibc_2.0.4-7+rpi1 libkmod2_22-1 libltdl-dev_2.4.6-0.1 libltdl7_2.4.6-0.1 liblz4-1_0.0~r131-1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.27.1-3 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libopenmpi-dev_1.10.2-8+rpi1 libopenmpi1.10_1.10.2-8+rpi1 libpam-modules_1.1.8-3.2 libpam-modules-bin_1.1.8-3.2 libpam-runtime_1.1.8-3.2 libpam0g_1.1.8-3.2 libpcre3_2:8.38-1 libperl5.22_5.22.1-5 libpipeline1_1.4.1-2 libpng12-0_1.2.54-1 libprocps3_2:3.3.9-9 libprocps5_2:3.3.11-3 libreadline6_6.3-8+b3 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libslang2_2.3.0-2+b1 libsmartcols1_2.27.1-3 libss2_1.42.13-1 libstdc++-4.9-dev_4.9.3-10 libstdc++-5-dev_5.3.1-10 libstdc++6_5.3.1-10 libsystemd0_228-6 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-10 libudev1_228-6 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-3 libxml2_2.9.3+dfsg1-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_9.20160110+rpi1 make_4.1-5 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.04-1 mawk_1.3.3-17 mount_2.27.1-3 multiarch-support_2.21-7 nano_2.5.1-1 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 openmpi-common_1.10.2-8+rpi1 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-5 perl-base_5.22.1-5 perl-modules-5.22_5.22.1-7 po-debconf_1.0.19 procps_2:3.3.11-3 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-ampliconnoise-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-6 systemd-sysv_228-6 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2016a-1 udev_228-6 util-linux_2.27.1-3 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Fri Dec 18 15:10:34 2015 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./ampliconnoise_1.29-5.dsc
dpkg-source: info: extracting ampliconnoise in ampliconnoise-1.29
dpkg-source: info: unpacking ampliconnoise_1.29.orig.tar.gz
dpkg-source: info: unpacking ampliconnoise_1.29-5.debian.tar.xz
dpkg-source: info: applying fix-path-for-data.patch
dpkg-source: info: applying fix-segfault-on-non-fasta-input.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying clang-ftbfs.patch
dpkg-source: info: applying mayhem.patch
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 1.29-5+b1
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-127046fa-0b39-4308-a02b-b412c57dcda5
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: source package ampliconnoise
dpkg-buildpackage: source version 1.29-5+b1
dpkg-buildpackage: source distribution stretch-staging
dpkg-source --before-build ampliconnoise-1.29
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
make -j1 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd FCluster && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
rm -rf *o FCluster
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
(cd FastaUnique && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
rm -rf *.o FastaUnique
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
(cd NDist && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
rm -rf *.o NDist
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
(cd PyroDist && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
rm -rf *.o PyroDist
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
(cd PyroNoise && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
rm -rf *.o PyroNoise
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
(cd PyroNoiseM && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
rm -rf *.o PyroNoiseM
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
(cd PyroNoiseA && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
rm -rf *.o PyroNoiseA
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
(cd SeqDist && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
rm -rf *.o SeqDist
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
(cd SeqNoise && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
rm -rf *.o SeqNoise
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
(cd SplitClusterEven && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
rm -rf *.o SplitClusterEven
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
(cd SplitClusterClust && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
rm -rf *.o SplitClusterClust
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
(cd Perseus && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
rm -rf *.o Perseus
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
(cd PerseusD && make clean)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
rm -rf *.o PerseusD
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
(cd bin && rm -rf *)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean
rm -f *.o
rm -f *.1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_update_autotools_config -a
dh_auto_configure -a
dh_auto_build -a
make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd FCluster && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FCluster'
cc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c FCluster.c
FCluster.c:223:1: warning: return type defaults to 'int' [-Wimplicit-int]
UpdateMinCacheForMarkedRows(struct t_Min* asMin,float** aafDistMatrix,int nN)
^
FCluster.c: In function 'UpdateMinCacheForMarkedRows':
FCluster.c:230:13: warning: implicit declaration of function 'UpdateMinCacheForRow' [-Wimplicit-function-declaration]
UpdateMinCacheForRow(asMin,i,aafDistMatrix);
^
FCluster.c: At top level:
FCluster.c:237:1: warning: return type defaults to 'int' [-Wimplicit-int]
UpdateMinCacheForRow(struct t_Min* asMin,int i,float** aafDistMatrix)
^
linking...
cc -Wl,-z,relro -o FCluster FCluster.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FCluster'
(cd FastaUnique && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/FastaUnique'
cc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c FastaUnique.c
linking...
cc -Wl,-z,relro -o FastaUnique FastaUnique.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/FastaUnique'
(cd NDist && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/NDist'
mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c NDist.c
NDist.c: In function 'readData':
NDist.c:707:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^
linking...
mpicc -Wl,-z,relro -o NDist NDist.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/NDist'
(cd PyroDist && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroDist'
mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PyroDist.c
linking...
mpicc -Wl,-z,relro -o PyroDist PyroDist.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroDist'
(cd PyroNoise && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoise'
mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PyroNoise.c
PyroNoise.c: In function 'writeCentroids':
PyroNoise.c:2073:21: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile);
^
linking...
mpicc -Wl,-z,relro -o PyroNoise PyroNoise.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoise'
(cd SeqDist && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqDist'
mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SeqDist.c
SeqDist.c: In function 'readData':
SeqDist.c:854:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^
linking...
mpicc -Wl,-z,relro -o SeqDist SeqDist.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqDist'
(cd PyroNoiseM && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseM'
mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PyroNoiseM.c
PyroNoiseM.c: In function 'writeCentroids':
PyroNoiseM.c:2139:21: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile);
^
linking...
mpicc -Wl,-z,relro -o PyroNoiseM PyroNoiseM.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseM'
(cd PyroNoiseA && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PyroNoiseA'
mpicc -O3 -c PyroNoiseA.c
linking...
mpicc -o PyroNoiseA PyroNoiseA.o -lm -Wl,-z,relro
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PyroNoiseA'
(cd SeqNoise && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SeqNoise'
mpicc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SeqNoise.c
SeqNoise.c: In function 'main':
SeqNoise.c:120:25: warning: too many arguments for format [-Wformat-extra-args]
if(bVerbose){printf("%d: Broadcast distance matrix\n", rank, nSize, nPacket); fflush(stdout);}
^
SeqNoise.c: In function 'readData':
SeqNoise.c:652:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^
linking...
mpicc -Wl,-z,relro -o SeqNoise SeqNoise.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SeqNoise'
(cd SplitClusterEven && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterEven'
cc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SplitClusterEven.c
SplitClusterEven.c: In function 'readMapFile':
SplitClusterEven.c:681:19: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Failed to open map file\n", szMapFile);
^
linking...
cc -Wl,-z,relro -o SplitClusterEven SplitClusterEven.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterEven'
(cd SplitClusterClust && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/SplitClusterClust'
gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c SplitClusterClust.c
SplitClusterClust.c: In function 'readMapFile':
SplitClusterClust.c:316:19: warning: too many arguments for format [-Wformat-extra-args]
fprintf(stderr, "Failed to open map file\n", szMapFile);
^
linking...
gcc -Wl,-z,relro -o SplitClusterClust SplitClusterClust.o -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/SplitClusterClust'
(cd Perseus && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Perseus'
cc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c Perseus.c
Perseus.c: In function 'readData':
Perseus.c:856:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^
linking...
cc -Wl,-z,relro -o Perseus Perseus.o -lm -lgsl -lgslcblas
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Perseus'
(cd PerseusD && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make)
make[2]: Entering directory '/<<PKGBUILDDIR>>/PerseusD'
cc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -c PerseusD.c
PerseusD.c: In function 'readData':
PerseusD.c:908:52: warning: implicit declaration of function 'toupper' [-Wimplicit-function-declaration]
ptData->acSequences[(nSequences - 1)*nM + nPos] = toupper(szLine[i]);
^
linking...
cc -Wl,-z,relro -o PerseusD PerseusD.o -lm -lgsl -lgslcblas
make[2]: Leaving directory '/<<PKGBUILDDIR>>/PerseusD'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make install
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp FCluster/FCluster bin
cp FastaUnique/FastaUnique bin
cp NDist/NDist bin
cp PyroDist/PyroDist bin
cp PyroNoise/PyroNoise bin
cp PyroNoiseM/PyroNoiseM bin
cp PyroNoiseA/PyroNoiseA bin
cp SeqDist/SeqDist bin
cp SeqNoise/SeqNoise bin
cp SplitClusterEven/SplitClusterEven bin
cp SplitClusterClust/SplitClusterClust bin
cp Perseus/Perseus bin
cp PerseusD/PerseusD bin
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install bin/* /usr/bin
dh_install Data/* /usr/share/ampliconnoise/Data/
dh_install Scripts/* /usr/share/ampliconnoise/Scripts/
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
debian/ampliconnoise.pod
pod2man -c AmpliconNoise Documentation debian/ampliconnoise.pod > ampliconnoise.1
dh_installman ampliconnoise.1
( for f in bin/* ; do \
ln -s ampliconnoise.1 debian/ampliconnoise/usr/share/man/man1/`basename "$f"`.1 ; \
done )
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ampliconnoise/usr/bin/PyroNoiseM debian/ampliconnoise/usr/bin/Perseus debian/ampliconnoise/usr/bin/NDist debian/ampliconnoise/usr/bin/PerseusD debian/ampliconnoise/usr/bin/PyroDist debian/ampliconnoise/usr/bin/SeqDist debian/ampliconnoise/usr/bin/FastaUnique debian/ampliconnoise/usr/bin/SplitClusterClust debian/ampliconnoise/usr/bin/SeqNoise debian/ampliconnoise/usr/bin/PyroNoise debian/ampliconnoise/usr/bin/SplitClusterEven debian/ampliconnoise/usr/bin/FCluster were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ampliconnoise/usr/bin/Perseus debian/ampliconnoise/usr/bin/PerseusD were not linked against libgslcblas.so.0 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package ampliconnoise: unused substitution variable ${perl:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package ampliconnoise: unused substitution variable ${perl:Depends}
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'ampliconnoise-dbgsym' in '../ampliconnoise-dbgsym_1.29-5+b1_armhf.deb'.
dpkg-deb: building package 'ampliconnoise' in '../ampliconnoise_1.29-5+b1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../ampliconnoise_1.29-5+b1_armhf.changes
dpkg-genchanges: warning: package ampliconnoise-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build ampliconnoise-1.29
dpkg-buildpackage: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160310-0411
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ampliconnoise_1.29-5+b1_armhf.changes:
--------------------------------------
Format: 1.8
Date: Fri, 18 Dec 2015 16:05:09 +0100
Source: ampliconnoise (1.29-5)
Binary: ampliconnoise
Binary-Only: yes
Architecture: armhf
Version: 1.29-5+b1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
ampliconnoise - removal of noise from 454 sequenced PCR amplicons
Changes:
ampliconnoise (1.29-5+b1) stretch-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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6c638dbba56e0c2dfea8948d5978708873518d57 441656 ampliconnoise_1.29-5+b1_armhf.deb
Checksums-Sha256:
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0bdcb22ea2e97a7a9a82c7c3f41f7823b267e7b648ff62b029b13aea248a536a 441656 ampliconnoise_1.29-5+b1_armhf.deb
Files:
3fadbb105f04ddf60678f92a3fd4c18b 255432 debug extra ampliconnoise-dbgsym_1.29-5+b1_armhf.deb
bec67e170efefbdcc825e3d82043584e 441656 science optional ampliconnoise_1.29-5+b1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ampliconnoise-dbgsym_1.29-5+b1_armhf.deb
----------------------------------------
new debian package, version 2.0.
size 255432 bytes: control archive=1152 bytes.
946 bytes, 13 lines control
1378 bytes, 13 lines md5sums
Package: ampliconnoise-dbgsym
Source: ampliconnoise (1.29-5)
Version: 1.29-5+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 365
Depends: ampliconnoise (= 1.29-5+b1)
Section: debug
Priority: extra
Homepage: http://code.google.com/p/ampliconnoise/
Description: Debug symbols for ampliconnoise
Auto-Built-Package: debug-symbols
Build-Ids: 008a1e40024881c276d0f86bbd74e41c8c98cb0b 20ea3fa9a97221726a0a89a81dccbec234a98ce4 31a6817b566e297d19e13aa7fcdfd33714566da8 36a31032fa1f78a155b2b4ffff3970a8da8e75ed 3a78ba8892c685d15fb1e0c528795c85b466e38c 3d2629c007cef33408d91998b9d1418b6e9d4e76 641cd4d16238238f2f5e01ec8924a8e515c40872 68f82fe6e32428a8fef38830845949e61d3d5e00 7919af4f53919dcf2c31b648905bd14f998f4d3e 9d693bdb53cb23ff13c0b9a5caf0f68698878f99 b3fd58f4528593cc399b49ac3cf2376f662eccc0 cc3c2f6f9af19caa23000344869bf63eb4ee9959 d1c88e3c224760a3e6f844ff366385a4524c6d24
drwxr-xr-x root/root 0 2016-03-10 04:10 ./
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/00/
-rw-r--r-- root/root 40876 2016-03-10 04:10 ./usr/lib/debug/.build-id/00/8a1e40024881c276d0f86bbd74e41c8c98cb0b.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/20/
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drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/31/
-rw-r--r-- root/root 20256 2016-03-10 04:10 ./usr/lib/debug/.build-id/31/a6817b566e297d19e13aa7fcdfd33714566da8.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/36/
-rw-r--r-- root/root 22864 2016-03-10 04:10 ./usr/lib/debug/.build-id/36/a31032fa1f78a155b2b4ffff3970a8da8e75ed.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/3a/
-rw-r--r-- root/root 20216 2016-03-10 04:10 ./usr/lib/debug/.build-id/3a/78ba8892c685d15fb1e0c528795c85b466e38c.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/3d/
-rw-r--r-- root/root 19888 2016-03-10 04:10 ./usr/lib/debug/.build-id/3d/2629c007cef33408d91998b9d1418b6e9d4e76.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/64/
-rw-r--r-- root/root 15744 2016-03-10 04:10 ./usr/lib/debug/.build-id/64/1cd4d16238238f2f5e01ec8924a8e515c40872.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/68/
-rw-r--r-- root/root 10708 2016-03-10 04:10 ./usr/lib/debug/.build-id/68/f82fe6e32428a8fef38830845949e61d3d5e00.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/79/
-rw-r--r-- root/root 13292 2016-03-10 04:10 ./usr/lib/debug/.build-id/79/19af4f53919dcf2c31b648905bd14f998f4d3e.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/9d/
-rw-r--r-- root/root 32852 2016-03-10 04:10 ./usr/lib/debug/.build-id/9d/693bdb53cb23ff13c0b9a5caf0f68698878f99.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/b3/
-rw-r--r-- root/root 50124 2016-03-10 04:10 ./usr/lib/debug/.build-id/b3/fd58f4528593cc399b49ac3cf2376f662eccc0.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/cc/
-rw-r--r-- root/root 33916 2016-03-10 04:10 ./usr/lib/debug/.build-id/cc/3c2f6f9af19caa23000344869bf63eb4ee9959.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/lib/debug/.build-id/d1/
-rw-r--r-- root/root 12632 2016-03-10 04:10 ./usr/lib/debug/.build-id/d1/c88e3c224760a3e6f844ff366385a4524c6d24.debug
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/doc/ampliconnoise-dbgsym -> ampliconnoise
ampliconnoise_1.29-5+b1_armhf.deb
---------------------------------
new debian package, version 2.0.
size 441656 bytes: control archive=2640 bytes.
923 bytes, 23 lines control
4986 bytes, 68 lines md5sums
Package: ampliconnoise
Source: ampliconnoise (1.29-5)
Version: 1.29-5+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1254
Depends: libc6 (>= 2.4), libgsl2, libopenmpi1.10, mafft
Recommends: openmpi-bin
Section: science
Priority: optional
Homepage: http://code.google.com/p/ampliconnoise/
Description: removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput
sequence data. It consists of three main parts:
.
Pyronoise - does flowgram-based clustering to spot misreads
SeqNoise - removes PCR point mutations
Perseus - removes PCR chimeras without the need for a set of reference
sequences
.
Previously there was a standalone "Pyronoise" by the same authors and
this package includes an updated version. There is also a "Denoiser"
in Qiime which is related but distinct.
drwxr-xr-x root/root 0 2016-03-10 04:10 ./
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/bin/
-rwxr-xr-x root/root 18000 2016-03-10 04:10 ./usr/bin/FCluster
-rwxr-xr-x root/root 9816 2016-03-10 04:10 ./usr/bin/FastaUnique
-rwxr-xr-x root/root 13932 2016-03-10 04:10 ./usr/bin/NDist
-rwxr-xr-x root/root 30320 2016-03-10 04:10 ./usr/bin/Perseus
-rwxr-xr-x root/root 30328 2016-03-10 04:10 ./usr/bin/PerseusD
-rwxr-xr-x root/root 18036 2016-03-10 04:10 ./usr/bin/PyroDist
-rwxr-xr-x root/root 46732 2016-03-10 04:10 ./usr/bin/PyroNoise
-rwxr-xr-x root/root 50832 2016-03-10 04:10 ./usr/bin/PyroNoiseA
-rwxr-xr-x root/root 50828 2016-03-10 04:10 ./usr/bin/PyroNoiseM
-rwxr-xr-x root/root 18036 2016-03-10 04:10 ./usr/bin/SeqDist
-rwxr-xr-x root/root 38548 2016-03-10 04:10 ./usr/bin/SeqNoise
-rwxr-xr-x root/root 9780 2016-03-10 04:10 ./usr/bin/SplitClusterClust
-rwxr-xr-x root/root 17988 2016-03-10 04:10 ./usr/bin/SplitClusterEven
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/ampliconnoise/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/ampliconnoise/Data/
-rw-r--r-- root/root 140066 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/LookUp.dat
-rw-r--r-- root/root 140432 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/LookUp_E123.dat
-rw-r--r-- root/root 140348 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/LookUp_Titanium.dat
-rw-r--r-- root/root 156 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/Tran.dat
-rw-r--r-- root/root 44 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/TranN.dat
-rw-r--r-- root/root 156 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/Tran_D.dat
-rw-r--r-- root/root 150 2013-08-01 14:37 ./usr/share/ampliconnoise/Data/Tran_V6.dat
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/ampliconnoise/Scripts/
-rwxr-xr-x root/root 1726 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CSV.pl
-rwxr-xr-x root/root 645 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Class.pl
-rwxr-xr-x root/root 130 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Clean.sh
-rwxr-xr-x root/root 1954 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Clean360.pl
-rwxr-xr-x root/root 2604 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanAcyclic.pl
-rwxr-xr-x root/root 2554 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CleanBoth.pl
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-rwxr-xr-x root/root 268 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/CountFasta.pl
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-rwxr-xr-x root/root 1901 2013-08-01 14:37 ./usr/share/ampliconnoise/Scripts/Qiime.pl
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drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/doc-base/
-rw-r--r-- root/root 808 2013-09-12 08:57 ./usr/share/doc-base/ampliconnoise
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/doc/ampliconnoise/
-rw-r--r-- root/root 306514 2013-08-01 14:53 ./usr/share/doc/ampliconnoise/Doc.pdf
-rw-r--r-- root/root 353 2013-09-12 08:57 ./usr/share/doc/ampliconnoise/README.Debian
-rw-r--r-- root/root 224 2016-03-10 04:08 ./usr/share/doc/ampliconnoise/changelog.Debian.armhf.gz
-rw-r--r-- root/root 1976 2016-03-10 04:08 ./usr/share/doc/ampliconnoise/changelog.Debian.gz
-rw-r--r-- root/root 1287 2015-12-06 20:56 ./usr/share/doc/ampliconnoise/copyright
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/man/
drwxr-xr-x root/root 0 2016-03-10 04:10 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/FCluster.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/FastaUnique.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/NDist.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/Perseus.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/PerseusD.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/PyroDist.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/PyroNoise.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/PyroNoiseA.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/PyroNoiseM.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/SeqDist.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/SeqNoise.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/SplitClusterClust.1.gz -> ampliconnoise.1.gz
lrwxrwxrwx root/root 0 2016-03-10 04:10 ./usr/share/man/man1/SplitClusterEven.1.gz -> ampliconnoise.1.gz
-rw-r--r-- root/root 2828 2016-03-10 04:10 ./usr/share/man/man1/ampliconnoise.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 11864
Build-Time: 140
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 314
Job: ampliconnoise_1.29-5
Machine Architecture: armhf
Package: ampliconnoise
Package-Time: 499
Source-Version: 1.29-5
Space: 11864
Status: successful
Version: 1.29-5+b1
--------------------------------------------------------------------------------
Finished at 20160310-0411
Build needed 00:08:19, 11864k disc space