altree →
1.3.1-7 →
armhf → 2018-06-12 05:12:20
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| altree 1.3.1-7 (armhf) Tue, 12 Jun 2018 04:48:08 +0000 |
+==============================================================================+
Package: altree
Version: 1.3.1-7
Source Version: 1.3.1-7
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-b74b020d-f7a6-4e1a-b66f-bb8e728b5004' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.8 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.6 MB]
Fetched 23.4 MB in 28s (828 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'altree' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/altree.git
Please use:
git clone https://salsa.debian.org/med-team/altree.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 517 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main altree 1.3.1-7 (dsc) [2273 B]
Get:2 http://172.17.0.1/private buster-staging/main altree 1.3.1-7 (tar) [509 kB]
Get:3 http://172.17.0.1/private buster-staging/main altree 1.3.1-7 (diff) [6160 B]
Fetched 517 kB in 0s (1583 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/altree-P3DTGe/altree-1.3.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/altree-P3DTGe' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-mlHLjx/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-mlHLjx/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-mlHLjx/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (3297 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 45 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (15.4 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15771 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: bash-completion, debhelper (>= 11~), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl, fig2dev
Filtered Build-Depends: bash-completion, debhelper (>= 11~), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl, fig2dev
dpkg-deb: building package 'sbuild-build-depends-altree-dummy' in '/<<BUILDDIR>>/resolver-mlHLjx/apt_archive/sbuild-build-depends-altree-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-altree-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Sources [600 B]
Get:5 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ Packages [682 B]
Fetched 2615 B in 1s (4027 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install altree build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libnss-systemd
libpam-systemd libsasl2-modules openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils cpp-7
debhelper dh-autoreconf dh-strip-nondeterminism dwz fig2dev file
fontconfig-config fonts-dejavu-core fonts-lmodern g++-7 gawk gcc-7
gcc-7-base gettext gettext-base ghostscript groff-base intltool-debian
latex-make libarchive-zip-perl libasan4 libatlas-base-dev libatlas3-base
libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbsd0
libcairo2 libcilkrts5 libcroco3 libcups2 libcupsimage2 libelf1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-7-dev
libgfortran4 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev
libgsl23 libgslcblas0 libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b
libice6 libicu-le-hb0 libicu60 libijs-0.35 libisl19 libjbig0 libjbig2dec0
libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3
libkrb5support0 liblcms2-2 libmagic-mgc libmagic1 libmath-tamuanova-perl
libnetpbm10 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0
libpng12-0 libpotrace0 libptexenc1 libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libsigsegv2 libsm6 libstdc++-7-dev libsynctex2
libtamuanova-0.2 libtest-deep-perl libtexlua52 libtexlua53 libtexluajit2
libtiff5 libtimedate-perl libtool libubsan0 libx11-6 libx11-data libxau6
libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2
libxmu6 libxpm4 libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support
netpbm po-debconf poppler-data preview-latex-style python python-minimal
python2.7 python2.7-minimal t1utils tex-common texlive-base texlive-binaries
texlive-fonts-recommended texlive-lang-french texlive-latex-base
texlive-latex-extra texlive-latex-recommended texlive-pictures ucf
x11-common xdg-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-7-locales dh-make xfig gcc-7-doc libstdc++6-7-dbg gawk-doc
libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan4-dbg
liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg
libquadmath0-dbg gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x
groff libatlas-doc liblapack-doc cups-common gsl-ref-psdoc | gsl-doc-pdf
| gsl-doc-info | gsl-ref-html krb5-doc krb5-user liblcms2-utils
libstdc++-7-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
apparmor less www-browser libmail-box-perl poppler-utils
fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic
| fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
python-doc python-tk python2.7-doc binfmt-support perl-tk xpdf-reader
| pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc
python-pygments icc-profiles libfile-which-perl
libspreadsheet-parseexcel-perl texlive-latex-extra-doc
texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
| libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
curl | wget | lynx gsfonts inkscape libcupsfilters1 libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
krb5-locales libltdl-dev libmail-sendmail-perl lmodern tex-gyre tipa
texlive-plain-generic ruby | ruby-interpreter tk libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils
debhelper dh-autoreconf dh-strip-nondeterminism dwz fig2dev file
fontconfig-config fonts-dejavu-core fonts-lmodern gawk gettext gettext-base
ghostscript groff-base intltool-debian latex-make libarchive-zip-perl
libatlas-base-dev libatlas3-base libavahi-client3 libavahi-common-data
libavahi-common3 libblas3 libbsd0 libcairo2 libcroco3 libcups2 libcupsimage2
libelf1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libgfortran4 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev
libgsl23 libgslcblas0 libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b
libice6 libicu-le-hb0 libicu60 libijs-0.35 libisl19 libjbig0 libjbig2dec0
libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3
libkrb5support0 liblcms2-2 libmagic-mgc libmagic1 libmath-tamuanova-perl
libnetpbm10 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0
libpng12-0 libpotrace0 libptexenc1 libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libsigsegv2 libsm6 libsynctex2 libtamuanova-0.2
libtest-deep-perl libtexlua52 libtexlua53 libtexluajit2 libtiff5
libtimedate-perl libtool libx11-6 libx11-data libxau6 libxaw7 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4
libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support netpbm po-debconf
poppler-data preview-latex-style python python-minimal python2.7
python2.7-minimal sbuild-build-depends-altree-dummy t1utils tex-common
texlive-base texlive-binaries texlive-fonts-recommended texlive-lang-french
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures ucf x11-common xdg-utils
The following packages will be upgraded:
cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libcilkrts5 libgcc-7-dev
libstdc++-7-dev libubsan0
9 upgraded, 130 newly installed, 0 to remove and 36 not upgraded.
Need to get 162 MB/166 MB of archives.
After this operation, 479 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-mlHLjx/apt_archive ./ sbuild-build-depends-altree-dummy 0.invalid.0 [968 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf gawk armhf 1:4.1.4+dfsg-1+b1 [506 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-1 [393 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-1 [1077 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15~rc1-1 [41.1 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-1 [1841 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-1 [298 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15~rc1-1 [20.5 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15~rc1-1 [155 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.09 [53.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libisl19 armhf 0.19-1 [427 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf g++-7 armhf 7.3.0-19 [5593 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf gcc-7 armhf 7.3.0-19 [5488 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf cpp-7 armhf 7.3.0-19 [5139 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libasan4 armhf 7.3.0-19 [301 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libubsan0 armhf 7.3.0-19 [106 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libcilkrts5 armhf 7.3.0-19 [35.2 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libstdc++-7-dev armhf 7.3.0-19 [1506 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libgcc-7-dev armhf 7.3.0-19 [671 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf gcc-7-base armhf 7.3.0-19 [187 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf bash-completion all 1:2.8-1 [207 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-2 [234 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-2 [106 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-2 [64.7 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.041-2 [20.0 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.041-2 [12.0 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.4 [160 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.7.6-1+b1 [799 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb0 armhf 1.0.3+git161113-5 [12.8 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libicu60 armhf 60.2-6 [7789 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7 [602 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.3.2 [994 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4 [122 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4 [51.1 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4 [53.7 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.8-2 [285 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.8-2 [128 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.0-5 [280 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.0-5 [325 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-13 [16.7 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.14-1 [52.9 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.9-5 [224 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.22~dfsg-2.1 [5241 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.22~dfsg-2.1 [1809 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf ghostscript armhf 9.22~dfsg-2.1 [95.9 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libnetpbm10 armhf 2:10.0-15.3 [74.4 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libpng12-0 armhf 1.2.54-6 [160 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf netpbm armhf 2:10.0-15.3 [888 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.5-1 [292 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.5-1 [683 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf fig2dev armhf 1:3.2.7a-1 [601 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-3 [4540 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf latex-make all 2.2.4-1 [778 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libatlas3-base armhf 3.10.3-6+rpi1 [2439 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libatlas-base-dev armhf 3.10.3-6+rpi1 [3010 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-1 [103 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.15.10-3 [575 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libgslcblas0 armhf 2.4+dfsg-6 [75.1 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libgsl23 armhf 2.4+dfsg-6 [681 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libgsl-dev armhf 2.4+dfsg-6 [863 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 1.7.6-1+b1 [584 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2018.20180416.47457-4 [156 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libtamuanova-0.2 armhf 0.2-4+b2 [7760 B]
Get:88 http://172.17.0.1/private buster-staging/main armhf libmath-tamuanova-perl armhf 1.0.2-2+b4 [12.4 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.15-1 [23.9 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2018.20180416.47457-4 [57.0 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libsynctex2 armhf 2018.20180416.47457-4 [66.6 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libtest-deep-perl all 1.128-1 [48.8 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2018.20180416.47457-4 [86.6 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libtexlua53 armhf 2018.20180416.47457-4 [97.8 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2018.20180416.47457-4 [204 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.1 [51.5 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf preview-latex-style all 11.91-1 [201 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.41-2 [52.0 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2018.20180416.47457-4 [8511 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2018.20180505-1 [18.9 MB]
Get:105 http://172.17.0.1/private buster-staging/main armhf texlive-fonts-recommended all 2018.20180505-1 [5292 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf texlive-lang-french all 2018.20180505-1 [25.5 MB]
Get:107 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2018.20180505-1 [983 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf texlive-latex-recommended all 2018.20180505-1 [15.3 MB]
Get:109 http://172.17.0.1/private buster-staging/main armhf texlive-pictures all 2018.20180505-1 [4112 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf texlive-latex-extra all 2018.20180505-1 [11.0 MB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 162 MB in 53s (3079 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 15771 files and directories currently installed.)
Preparing to unpack .../0-libbsd0_0.9.1-1_armhf.deb ...
Unpacking libbsd0:armhf (0.9.1-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../1-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../2-groff-base_1.22.3-10_armhf.deb ...
Unpacking groff-base (1.22.3-10) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../3-libpipeline1_1.5.0-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.0-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../4-man-db_2.8.3-2_armhf.deb ...
Unpacking man-db (2.8.3-2) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../5-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package gawk.
(Reading database ... 16389 files and directories currently installed.)
Preparing to unpack .../0-gawk_1%3a4.1.4+dfsg-1+b1_armhf.deb ...
Unpacking gawk (1:4.1.4+dfsg-1+b1) ...
Selecting previously unselected package poppler-data.
Preparing to unpack .../1-poppler-data_0.4.9-2_all.deb ...
Unpacking poppler-data (0.4.9-2) ...
Selecting previously unselected package libpython2.7-minimal:armhf.
Preparing to unpack .../2-libpython2.7-minimal_2.7.15-1_armhf.deb ...
Unpacking libpython2.7-minimal:armhf (2.7.15-1) ...
Selecting previously unselected package python2.7-minimal.
Preparing to unpack .../3-python2.7-minimal_2.7.15-1_armhf.deb ...
Unpacking python2.7-minimal (2.7.15-1) ...
Selecting previously unselected package python-minimal.
Preparing to unpack .../4-python-minimal_2.7.15~rc1-1_armhf.deb ...
Unpacking python-minimal (2.7.15~rc1-1) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../5-mime-support_3.60_all.deb ...
Unpacking mime-support (3.60) ...
Selecting previously unselected package libpython2.7-stdlib:armhf.
Preparing to unpack .../6-libpython2.7-stdlib_2.7.15-1_armhf.deb ...
Unpacking libpython2.7-stdlib:armhf (2.7.15-1) ...
Selecting previously unselected package python2.7.
Preparing to unpack .../7-python2.7_2.7.15-1_armhf.deb ...
Unpacking python2.7 (2.7.15-1) ...
Selecting previously unselected package libpython-stdlib:armhf.
Preparing to unpack .../8-libpython-stdlib_2.7.15~rc1-1_armhf.deb ...
Unpacking libpython-stdlib:armhf (2.7.15~rc1-1) ...
Setting up libpython2.7-minimal:armhf (2.7.15-1) ...
Setting up python2.7-minimal (2.7.15-1) ...
Setting up python-minimal (2.7.15~rc1-1) ...
Selecting previously unselected package python.
(Reading database ... 17838 files and directories currently installed.)
Preparing to unpack .../000-python_2.7.15~rc1-1_armhf.deb ...
Unpacking python (2.7.15~rc1-1) ...
Selecting previously unselected package ucf.
Preparing to unpack .../001-ucf_3.0038_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038) ...
Selecting previously unselected package tex-common.
Preparing to unpack .../002-tex-common_6.09_all.deb ...
Unpacking tex-common (6.09) ...
Selecting previously unselected package libisl19:armhf.
Preparing to unpack .../003-libisl19_0.19-1_armhf.deb ...
Unpacking libisl19:armhf (0.19-1) ...
Preparing to unpack .../004-g++-7_7.3.0-19_armhf.deb ...
Unpacking g++-7 (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../005-gcc-7_7.3.0-19_armhf.deb ...
Unpacking gcc-7 (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../006-cpp-7_7.3.0-19_armhf.deb ...
Unpacking cpp-7 (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../007-libasan4_7.3.0-19_armhf.deb ...
Unpacking libasan4:armhf (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../008-libubsan0_7.3.0-19_armhf.deb ...
Unpacking libubsan0:armhf (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../009-libcilkrts5_7.3.0-19_armhf.deb ...
Unpacking libcilkrts5:armhf (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../010-libstdc++-7-dev_7.3.0-19_armhf.deb ...
Unpacking libstdc++-7-dev:armhf (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../011-libgcc-7-dev_7.3.0-19_armhf.deb ...
Unpacking libgcc-7-dev:armhf (7.3.0-19) over (7.3.0-12) ...
Preparing to unpack .../012-gcc-7-base_7.3.0-19_armhf.deb ...
Unpacking gcc-7-base:armhf (7.3.0-19) over (7.3.0-12) ...
Selecting previously unselected package bash-completion.
Preparing to unpack .../013-bash-completion_1%3a2.8-1_all.deb ...
Unpacking bash-completion (1:2.8-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../014-libmagic-mgc_1%3a5.33-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.33-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../015-libmagic1_1%3a5.33-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.33-2) ...
Selecting previously unselected package file.
Preparing to unpack .../016-file_1%3a5.33-2_armhf.deb ...
Unpacking file (1:5.33-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../017-gettext-base_0.19.8.1-6_armhf.deb ...
Unpacking gettext-base (0.19.8.1-6) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../018-libkeyutils1_1.5.9-9.2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.5.9-9.2) ...
Selecting previously unselected package m4.
Preparing to unpack .../019-m4_1.4.18-1_armhf.deb ...
Unpacking m4 (1.4.18-1) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../020-autoconf_2.69-11_all.deb ...
Unpacking autoconf (2.69-11) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../021-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../022-automake_1%3a1.15.1-3.1_all.deb ...
Unpacking automake (1:1.15.1-3.1) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../023-autopoint_0.19.8.1-6_all.deb ...
Unpacking autopoint (0.19.8.1-6) ...
Selecting previously unselected package libtool.
Preparing to unpack .../024-libtool_2.4.6-2.1_all.deb ...
Unpacking libtool (2.4.6-2.1) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../025-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../026-libarchive-zip-perl_1.60-1_all.deb ...
Unpacking libarchive-zip-perl (1.60-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../027-libfile-stripnondeterminism-perl_0.041-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.041-2) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../028-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../029-dh-strip-nondeterminism_0.041-2_all.deb ...
Unpacking dh-strip-nondeterminism (0.041-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../030-libelf1_0.170-0.4_armhf.deb ...
Unpacking libelf1:armhf (0.170-0.4) ...
Selecting previously unselected package dwz.
Preparing to unpack .../031-dwz_0.12-2_armhf.deb ...
Unpacking dwz (0.12-2) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../032-libglib2.0-0_2.56.1-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.56.1-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../033-libfreetype6_2.8.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.8.1-2) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../034-libgraphite2-3_1.3.11-2_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.11-2) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../035-libharfbuzz0b_1.7.6-1+b1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (1.7.6-1+b1) ...
Selecting previously unselected package libicu-le-hb0:armhf.
Preparing to unpack .../036-libicu-le-hb0_1.0.3+git161113-5_armhf.deb ...
Unpacking libicu-le-hb0:armhf (1.0.3+git161113-5) ...
Selecting previously unselected package libicu60:armhf.
Preparing to unpack .../037-libicu60_60.2-6_armhf.deb ...
Unpacking libicu60:armhf (60.2-6) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../038-libxml2_2.9.4+dfsg1-7_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-7) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../039-libcroco3_0.6.12-2_armhf.deb ...
Unpacking libcroco3:armhf (0.6.12-2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../040-gettext_0.19.8.1-6_armhf.deb ...
Unpacking gettext (0.19.8.1-6) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../041-intltool-debian_0.35.0+20060710.4_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../042-po-debconf_1.0.20_all.deb ...
Unpacking po-debconf (1.0.20) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../043-debhelper_11.3.2_all.deb ...
Unpacking debhelper (11.3.2) ...
Selecting previously unselected package libavahi-common-data:armhf.
Preparing to unpack .../044-libavahi-common-data_0.7-4_armhf.deb ...
Unpacking libavahi-common-data:armhf (0.7-4) ...
Selecting previously unselected package libavahi-common3:armhf.
Preparing to unpack .../045-libavahi-common3_0.7-4_armhf.deb ...
Unpacking libavahi-common3:armhf (0.7-4) ...
Selecting previously unselected package libavahi-client3:armhf.
Preparing to unpack .../046-libavahi-client3_0.7-4_armhf.deb ...
Unpacking libavahi-client3:armhf (0.7-4) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../047-libkrb5support0_1.16-2_armhf.deb ...
Unpacking libkrb5support0:armhf (1.16-2) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../048-libk5crypto3_1.16-2_armhf.deb ...
Unpacking libk5crypto3:armhf (1.16-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../049-libkrb5-3_1.16-2_armhf.deb ...
Unpacking libkrb5-3:armhf (1.16-2) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../050-libgssapi-krb5-2_1.16-2_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.16-2) ...
Selecting previously unselected package libcups2:armhf.
Preparing to unpack .../051-libcups2_2.2.8-2_armhf.deb ...
Unpacking libcups2:armhf (2.2.8-2) ...
Selecting previously unselected package libcupsimage2:armhf.
Preparing to unpack .../052-libcupsimage2_2.2.8-2_armhf.deb ...
Unpacking libcupsimage2:armhf (2.2.8-2) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../053-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../054-fontconfig-config_2.13.0-5_all.deb ...
Unpacking fontconfig-config (2.13.0-5) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../055-libfontconfig1_2.13.0-5_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.0-5) ...
Selecting previously unselected package libijs-0.35:armhf.
Preparing to unpack .../056-libijs-0.35_0.35-13_armhf.deb ...
Unpacking libijs-0.35:armhf (0.35-13) ...
Selecting previously unselected package libjbig2dec0:armhf.
Preparing to unpack .../057-libjbig2dec0_0.14-1_armhf.deb ...
Unpacking libjbig2dec0:armhf (0.14-1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../058-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../059-liblcms2-2_2.9-1_armhf.deb ...
Unpacking liblcms2-2:armhf (2.9-1) ...
Selecting previously unselected package libopenjp2-7:armhf.
Preparing to unpack .../060-libopenjp2-7_2.3.0-1_armhf.deb ...
Unpacking libopenjp2-7:armhf (2.3.0-1) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../061-libpaper1_1.1.24+nmu5_armhf.deb ...
Unpacking libpaper1:armhf (1.1.24+nmu5) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../062-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../063-libtiff5_4.0.9-5_armhf.deb ...
Unpacking libtiff5:armhf (4.0.9-5) ...
Selecting previously unselected package libgs9-common.
Preparing to unpack .../064-libgs9-common_9.22~dfsg-2.1_all.deb ...
Unpacking libgs9-common (9.22~dfsg-2.1) ...
Selecting previously unselected package libgs9:armhf.
Preparing to unpack .../065-libgs9_9.22~dfsg-2.1_armhf.deb ...
Unpacking libgs9:armhf (9.22~dfsg-2.1) ...
Selecting previously unselected package ghostscript.
Preparing to unpack .../066-ghostscript_9.22~dfsg-2.1_armhf.deb ...
Unpacking ghostscript (9.22~dfsg-2.1) ...
Selecting previously unselected package libnetpbm10.
Preparing to unpack .../067-libnetpbm10_2%3a10.0-15.3_armhf.deb ...
Unpacking libnetpbm10 (2:10.0-15.3) ...
Selecting previously unselected package libpng12-0:armhf.
Preparing to unpack .../068-libpng12-0_1.2.54-6_armhf.deb ...
Unpacking libpng12-0:armhf (1.2.54-6) ...
Selecting previously unselected package netpbm.
Preparing to unpack .../069-netpbm_2%3a10.0-15.3_armhf.deb ...
Unpacking netpbm (2:10.0-15.3) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../070-x11-common_1%3a7.7+19_all.deb ...
Unpacking x11-common (1:7.7+19) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../071-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../072-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../073-libxcb1_1.13-1_armhf.deb ...
Unpacking libxcb1:armhf (1.13-1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../074-libx11-data_2%3a1.6.5-1_all.deb ...
Unpacking libx11-data (2:1.6.5-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../075-libx11-6_2%3a1.6.5-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.5-1) ...
Selecting previously unselected package libxpm4:armhf.
Preparing to unpack .../076-libxpm4_1%3a3.5.12-1_armhf.deb ...
Unpacking libxpm4:armhf (1:3.5.12-1) ...
Selecting previously unselected package fig2dev.
Preparing to unpack .../077-fig2dev_1%3a3.2.7a-1_armhf.deb ...
Unpacking fig2dev (1:3.2.7a-1) ...
Selecting previously unselected package fonts-lmodern.
Preparing to unpack .../078-fonts-lmodern_2.004.5-3_all.deb ...
Unpacking fonts-lmodern (2.004.5-3) ...
Selecting previously unselected package latex-make.
Preparing to unpack .../079-latex-make_2.2.4-1_all.deb ...
Unpacking latex-make (2.2.4-1) ...
Selecting previously unselected package libgfortran4:armhf.
Preparing to unpack .../080-libgfortran4_7.3.0-19_armhf.deb ...
Unpacking libgfortran4:armhf (7.3.0-19) ...
Selecting previously unselected package libatlas3-base:armhf.
Preparing to unpack .../081-libatlas3-base_3.10.3-6+rpi1_armhf.deb ...
Unpacking libatlas3-base:armhf (3.10.3-6+rpi1) ...
Selecting previously unselected package libatlas-base-dev:armhf.
Preparing to unpack .../082-libatlas-base-dev_3.10.3-6+rpi1_armhf.deb ...
Unpacking libatlas-base-dev:armhf (3.10.3-6+rpi1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../083-libblas3_3.8.0-1_armhf.deb ...
Unpacking libblas3:armhf (3.8.0-1) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../084-libpixman-1-0_0.34.0-2_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.34.0-2) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../085-libxcb-render0_1.13-1_armhf.deb ...
Unpacking libxcb-render0:armhf (1.13-1) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../086-libxcb-shm0_1.13-1_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.13-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../087-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../088-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../089-libcairo2_1.15.10-3_armhf.deb ...
Unpacking libcairo2:armhf (1.15.10-3) ...
Selecting previously unselected package libgslcblas0:armhf.
Preparing to unpack .../090-libgslcblas0_2.4+dfsg-6_armhf.deb ...
Unpacking libgslcblas0:armhf (2.4+dfsg-6) ...
Selecting previously unselected package libgsl23:armhf.
Preparing to unpack .../091-libgsl23_2.4+dfsg-6_armhf.deb ...
Unpacking libgsl23:armhf (2.4+dfsg-6) ...
Selecting previously unselected package libgsl-dev.
Preparing to unpack .../092-libgsl-dev_2.4+dfsg-6_armhf.deb ...
Unpacking libgsl-dev (2.4+dfsg-6) ...
Selecting previously unselected package libharfbuzz-icu0:armhf.
Preparing to unpack .../093-libharfbuzz-icu0_1.7.6-1+b1_armhf.deb ...
Unpacking libharfbuzz-icu0:armhf (1.7.6-1+b1) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../094-libice6_2%3a1.0.9-2_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-2) ...
Selecting previously unselected package libkpathsea6:armhf.
Preparing to unpack .../095-libkpathsea6_2018.20180416.47457-4_armhf.deb ...
Unpacking libkpathsea6:armhf (2018.20180416.47457-4) ...
Selecting previously unselected package libtamuanova-0.2.
Preparing to unpack .../096-libtamuanova-0.2_0.2-4+b2_armhf.deb ...
Unpacking libtamuanova-0.2 (0.2-4+b2) ...
Selecting previously unselected package libmath-tamuanova-perl.
Preparing to unpack .../097-libmath-tamuanova-perl_1.0.2-2+b4_armhf.deb ...
Unpacking libmath-tamuanova-perl (1.0.2-2+b4) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../098-libpaper-utils_1.1.24+nmu5_armhf.deb ...
Unpacking libpaper-utils (1.1.24+nmu5) ...
Selecting previously unselected package libpotrace0:armhf.
Preparing to unpack .../099-libpotrace0_1.15-1_armhf.deb ...
Unpacking libpotrace0:armhf (1.15-1) ...
Selecting previously unselected package libptexenc1:armhf.
Preparing to unpack .../100-libptexenc1_2018.20180416.47457-4_armhf.deb ...
Unpacking libptexenc1:armhf (2018.20180416.47457-4) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../101-libsm6_2%3a1.2.2-1+b3_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.2-1+b3) ...
Selecting previously unselected package libsynctex2:armhf.
Preparing to unpack .../102-libsynctex2_2018.20180416.47457-4_armhf.deb ...
Unpacking libsynctex2:armhf (2018.20180416.47457-4) ...
Selecting previously unselected package libtest-deep-perl.
Preparing to unpack .../103-libtest-deep-perl_1.128-1_all.deb ...
Unpacking libtest-deep-perl (1.128-1) ...
Selecting previously unselected package libtexlua52:armhf.
Preparing to unpack .../104-libtexlua52_2018.20180416.47457-4_armhf.deb ...
Unpacking libtexlua52:armhf (2018.20180416.47457-4) ...
Selecting previously unselected package libtexlua53:armhf.
Preparing to unpack .../105-libtexlua53_2018.20180416.47457-4_armhf.deb ...
Unpacking libtexlua53:armhf (2018.20180416.47457-4) ...
Selecting previously unselected package libtexluajit2:armhf.
Preparing to unpack .../106-libtexluajit2_2018.20180416.47457-4_armhf.deb ...
Unpacking libtexluajit2:armhf (2018.20180416.47457-4) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../107-libxt6_1%3a1.1.5-1_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1) ...
Selecting previously unselected package libxmu6:armhf.
Preparing to unpack .../108-libxmu6_2%3a1.1.2-2_armhf.deb ...
Unpacking libxmu6:armhf (2:1.1.2-2) ...
Selecting previously unselected package libxaw7:armhf.
Preparing to unpack .../109-libxaw7_2%3a1.0.13-1_armhf.deb ...
Unpacking libxaw7:armhf (2:1.0.13-1) ...
Selecting previously unselected package libxi6:armhf.
Preparing to unpack .../110-libxi6_2%3a1.7.9-1_armhf.deb ...
Unpacking libxi6:armhf (2:1.7.9-1) ...
Selecting previously unselected package libzzip-0-13:armhf.
Preparing to unpack .../111-libzzip-0-13_0.13.62-3.1_armhf.deb ...
Unpacking libzzip-0-13:armhf (0.13.62-3.1) ...
Selecting previously unselected package preview-latex-style.
Preparing to unpack .../112-preview-latex-style_11.91-1_all.deb ...
Unpacking preview-latex-style (11.91-1) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../113-t1utils_1.41-2_armhf.deb ...
Unpacking t1utils (1.41-2) ...
Selecting previously unselected package texlive-binaries.
Preparing to unpack .../114-texlive-binaries_2018.20180416.47457-4_armhf.deb ...
Unpacking texlive-binaries (2018.20180416.47457-4) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../115-xdg-utils_1.1.3-1_all.deb ...
Unpacking xdg-utils (1.1.3-1) ...
Selecting previously unselected package texlive-base.
Preparing to unpack .../116-texlive-base_2018.20180505-1_all.deb ...
Unpacking texlive-base (2018.20180505-1) ...
Selecting previously unselected package texlive-fonts-recommended.
Preparing to unpack .../117-texlive-fonts-recommended_2018.20180505-1_all.deb ...
Unpacking texlive-fonts-recommended (2018.20180505-1) ...
Selecting previously unselected package texlive-lang-french.
Preparing to unpack .../118-texlive-lang-french_2018.20180505-1_all.deb ...
Unpacking texlive-lang-french (2018.20180505-1) ...
Selecting previously unselected package texlive-latex-base.
Preparing to unpack .../119-texlive-latex-base_2018.20180505-1_all.deb ...
Unpacking texlive-latex-base (2018.20180505-1) ...
Selecting previously unselected package texlive-latex-recommended.
Preparing to unpack .../120-texlive-latex-recommended_2018.20180505-1_all.deb ...
Unpacking texlive-latex-recommended (2018.20180505-1) ...
Selecting previously unselected package texlive-pictures.
Preparing to unpack .../121-texlive-pictures_2018.20180505-1_all.deb ...
Unpacking texlive-pictures (2018.20180505-1) ...
Selecting previously unselected package texlive-latex-extra.
Preparing to unpack .../122-texlive-latex-extra_2018.20180505-1_all.deb ...
Unpacking texlive-latex-extra (2018.20180505-1) ...
Selecting previously unselected package sbuild-build-depends-altree-dummy.
Preparing to unpack .../123-sbuild-build-depends-altree-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-altree-dummy (0.invalid.0) ...
Setting up libgs9-common (9.22~dfsg-2.1) ...
Setting up libkpathsea6:armhf (2018.20180416.47457-4) ...
Setting up libtexlua52:armhf (2018.20180416.47457-4) ...
Setting up libtest-deep-perl (1.128-1) ...
Setting up libopenjp2-7:armhf (2.3.0-1) ...
Setting up libptexenc1:armhf (2018.20180416.47457-4) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libarchive-zip-perl (1.60-1) ...
Setting up mime-support (3.60) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up liblcms2-2:armhf (2.9-1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up poppler-data (0.4.9-2) ...
Setting up bash-completion (1:2.8-1) ...
find: '/etc/bash_completion.d/': No such file or directory
Setting up libelf1:armhf (0.170-0.4) ...
Setting up groff-base (1.22.3-10) ...
Setting up libglib2.0-0:armhf (2.56.1-2) ...
No schema files found: removed existing output file.
Setting up libnetpbm10 (2:10.0-15.3) ...
Setting up libtexlua53:armhf (2018.20180416.47457-4) ...
Setting up libtiff5:armhf (4.0.9-5) ...
Setting up gettext-base (0.19.8.1-6) ...
Setting up libsynctex2:armhf (2018.20180416.47457-4) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up m4 (1.4.18-1) ...
Setting up gawk (1:4.1.4+dfsg-1+b1) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up libpng12-0:armhf (1.2.54-6) ...
Setting up ucf (3.0038) ...
Setting up libfreetype6:armhf (2.8.1-2) ...
Setting up libmagic-mgc (1:5.33-2) ...
Setting up libmagic1:armhf (1:5.33-2) ...
Setting up libgraphite2-3:armhf (1.3.11-2) ...
Setting up gcc-7-base:armhf (7.3.0-19) ...
Setting up libjbig2dec0:armhf (0.14-1) ...
Setting up libpixman-1-0:armhf (0.34.0-2) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Setting up dwz (0.12-2) ...
Setting up autotools-dev (20180224.1) ...
Setting up t1utils (1.41-2) ...
Processing triggers for systemd (238-4) ...
Setting up libijs-0.35:armhf (0.35-13) ...
Setting up netpbm (2:10.0-15.3) ...
Setting up libpotrace0:armhf (1.15-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libzzip-0-13:armhf (0.13.62-3.1) ...
Setting up libgslcblas0:armhf (2.4+dfsg-6) ...
Setting up xdg-utils (1.1.3-1) ...
Setting up libtexluajit2:armhf (2018.20180416.47457-4) ...
Setting up libx11-data (2:1.6.5-1) ...
Setting up libpython2.7-stdlib:armhf (2.7.15-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-6) ...
Setting up fonts-lmodern (2.004.5-3) ...
Setting up libavahi-common-data:armhf (0.7-4) ...
Setting up libfile-stripnondeterminism-perl (0.041-2) ...
Setting up libisl19:armhf (0.19-1) ...
Setting up libpaper1:armhf (1.1.24+nmu5) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu5) ...
Setting up fontconfig-config (2.13.0-5) ...
Installing new version of config file /etc/fonts/fonts.conf ...
Setting up tex-common (6.09) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libasan4:armhf (7.3.0-19) ...
Setting up libgfortran4:armhf (7.3.0-19) ...
Setting up libgsl23:armhf (2.4+dfsg-6) ...
Setting up libgsl-dev (2.4+dfsg-6) ...
Setting up libcilkrts5:armhf (7.3.0-19) ...
Setting up libubsan0:armhf (7.3.0-19) ...
Setting up python2.7 (2.7.15-1) ...
Setting up libharfbuzz0b:armhf (1.7.6-1+b1) ...
Setting up preview-latex-style (11.91-1) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.33-2) ...
Setting up libkrb5support0:armhf (1.16-2) ...
Setting up libgcc-7-dev:armhf (7.3.0-19) ...
Setting up cpp-7 (7.3.0-19) ...
Setting up libtamuanova-0.2 (0.2-4+b2) ...
Setting up libstdc++-7-dev:armhf (7.3.0-19) ...
Setting up libpython-stdlib:armhf (2.7.15~rc1-1) ...
Setting up libblas3:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libavahi-common3:armhf (0.7-4) ...
Setting up libxcb1:armhf (1.13-1) ...
Setting up python (2.7.15~rc1-1) ...
Setting up libtool (2.4.6-2.1) ...
Setting up libfontconfig1:armhf (2.13.0-5) ...
Setting up libatlas3-base:armhf (3.10.3-6+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up libxcb-render0:armhf (1.13-1) ...
Setting up libmath-tamuanova-perl (1.0.2-2+b4) ...
Setting up gcc-7 (7.3.0-19) ...
Setting up g++-7 (7.3.0-19) ...
Setting up libx11-6:armhf (2:1.6.5-1) ...
Setting up latex-make (2.2.4-1) ...
Setting up libatlas-base-dev:armhf (3.10.3-6+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libxcb-shm0:armhf (1.13-1) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libavahi-client3:armhf (0.7-4) ...
Setting up libkrb5-3:armhf (1.16-2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up libcups2:armhf (2.2.8-2) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libcairo2:armhf (1.15.10-3) ...
Setting up libcupsimage2:armhf (2.2.8-2) ...
Setting up libgs9:armhf (9.22~dfsg-2.1) ...
Setting up ghostscript (9.22~dfsg-2.1) ...
Setting up fig2dev (1:3.2.7a-1) ...
Setting up dh-autoreconf (19) ...
Setting up libicu-le-hb0:armhf (1.0.3+git161113-5) ...
Setting up dh-strip-nondeterminism (0.041-2) ...
Setting up libicu60:armhf (60.2-6) ...
Setting up libharfbuzz-icu0:armhf (1.7.6-1+b1) ...
Setting up texlive-binaries (2018.20180416.47457-4) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libxml2:armhf (2.9.4+dfsg1-7) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up texlive-base (2018.20180505-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up texlive-fonts-recommended (2018.20180505-1) ...
Setting up texlive-latex-base (2018.20180505-1) ...
Setting up texlive-lang-french (2018.20180505-1) ...
Setting up texlive-latex-recommended (2018.20180505-1) ...
Setting up gettext (0.19.8.1-6) ...
Setting up texlive-pictures (2018.20180505-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up texlive-latex-extra (2018.20180505-1) ...
Setting up po-debconf (1.0.20) ...
Setting up debhelper (11.3.2) ...
Setting up sbuild-build-depends-altree-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Processing triggers for tex-common (6.09) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-15+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-19 gcc-7_7.3.0-19 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-19 libstdc++6_8.1.0-3+rpi1 linux-libc-dev_4.16.5-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-2+b1 bash-completion_1:2.8-1 binutils_2.30-15+rpi1 binutils-arm-linux-gnueabihf_2.30-15+rpi1 binutils-common_2.30-15+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32-0.1 build-essential_12.4+b1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-19 dash_0.5.8-2.10 dbus_1.12.8-2 dbus-user-session_1.12.8-2 debconf_1.5.66 debhelper_11.3.2 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.041-2 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1+b4 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 dwz_0.12-2 e2fslibs_1.44.2-1 e2fsprogs_1.44.2-1 e2fsprogs-l10n_1.44.2-1 fakeroot_1.22-2 fdisk_2.31.1-0.5 fig2dev_1:3.2.7a-1 file_1:5.33-2 findutils_4.6.0+git+20171230-2 fontconfig-config_2.13.0-5 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-3 g++_4:7.2.0-1d1 g++-7_7.3.0-19 gawk_1:4.1.4+dfsg-1+b1 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-19 gcc-7-base_7.3.0-19 gcc-8-base_8.1.0-3+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 ghostscript_9.22~dfsg-2.1 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 latex-make_2.2.4-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-19 libassuan0_2.5.1-2 libatlas-base-dev_3.10.3-6+rpi1 libatlas3-base_3.10.3-6+rpi1 libatomic1_8.1.0-3+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libavahi-client3_0.7-4 libavahi-common-data_0.7-4 libavahi-common3_0.7-4 libbinutils_2.30-15+rpi1 libblas3_3.8.0-1 libblkid1_2.32-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcairo2_1.15.10-3 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-3+rpi1 libcilkrts5_7.3.0-19 libcom-err2_1.44.2-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.8-2 libcupsimage2_2.2.8-2 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.8-2 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1+b4 libdpkg-perl_1.19.0.5 libdrm-common_2.4.91-2+rpi1 libdrm2_2.4.91-2+rpi1 libelf1_0.170-0.4 libexpat1_2.2.5-3 libext2fs2_1.44.2-1 libfakeroot_1.22-2 libfdisk1_2.32-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-2 libfontconfig1_2.13.0-5 libfreetype6_2.8.1-2 libgcc-7-dev_7.3.0-19 libgcc1_1:8.1.0-3+rpi1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran4_7.3.0-19 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8.1.0-3+rpi1 libgpg-error0_1.31-1 libgraphite2-3_1.3.11-2 libgs9_9.22~dfsg-2.1 libgs9-common_9.22~dfsg-2.1 libgsl-dev_2.4+dfsg-6 libgsl23_2.4+dfsg-6 libgslcblas0_2.4+dfsg-6 libgssapi-krb5-2_1.16-2 libharfbuzz-icu0_1.7.6-1+b1 libharfbuzz0b_1.7.6-1+b1 libhogweed4_3.4-1 libice6_2:1.0.9-2 libicu-le-hb0_1.0.3+git161113-5 libicu60_60.2-6 libidn11_1.33-2.2 libidn2-0_2.0.4-1.1 libijs-0.35_0.35-13 libip4tc0_1.6.2-1 libisl15_0.18-4 libisl19_0.19-1 libjbig0_2.1-3.1+b2 libjbig2dec0_0.14-1 libjpeg62-turbo_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkpathsea6_2018.20180416.47457-4 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 liblcms2-2_2.9-1 libldap-2.4-2_2.4.46+dfsg-5+rpi1 libldap-common_2.4.46+dfsg-5+rpi1 liblocale-gettext-perl_1.07-3+b2 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmath-tamuanova-perl_1.0.2-2+b4 libmount1_2.32-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180210-4 libncurses6_6.1+20180210-4 libncursesw5_6.1+20180210-4 libncursesw6_6.1+20180210-4 libnetpbm10_2:10.0-15.3 libnettle6_3.4-1 libnpth0_1.5-3 libnss-systemd_238-4 libopenjp2-7_2.3.0-1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre3_2:8.39-9 libperl5.24_5.24.1-4 libperl5.26_5.26.2-5 libpipeline1_1.5.0-1 libpixman-1-0_0.34.0-2 libplymouth4_0.9.3-3 libpng12-0_1.2.54-6 libpng16-16_1.6.34-1 libpotrace0_1.15-1 libprocps7_2:3.3.15-1 libptexenc1_2018.20180416.47457-4 libpython-stdlib_2.7.15~rc1-1 libpython2.7-minimal_2.7.15-1 libpython2.7-stdlib_2.7.15-1 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-2 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-2 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.32-0.1 libsqlite3-0_3.23.1-1 libss2_1.44.2-1 libssl1.1_1.1.0h-4 libstdc++-7-dev_7.3.0-19 libstdc++6_8.1.0-3+rpi1 libsynctex2_2018.20180416.47457-4 libsystemd0_238-4 libtamuanova-0.2_0.2-4+b2 libtasn1-6_4.13-3 libtest-deep-perl_1.128-1 libtexlua52_2018.20180416.47457-4 libtexlua53_2018.20180416.47457-4 libtexluajit2_2018.20180416.47457-4 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtiff5_4.0.9-5 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-4 libtinfo6_6.1+20180210-4 libtool_2.4.6-2.1 libubsan0_7.3.0-19 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32-0.1 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-render0_1.13-1 libxcb-shm0_1.13-1 libxcb1_1.13-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-7 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.3.4+dfsg-3+rpi1 libzzip-0-13_0.13.62-3.1 linux-base_4.5 linux-libc-dev_4.16.5-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mime-support_3.60 mount_2.32-0.1 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1+20180210-4 ncurses-bin_6.1-1 netbase_5.4 netpbm_2:10.0-15.3 openssl_1.1.0h-4 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-5 perl-base_5.26.2-5 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-5 pinentry-curses_1.1.0-1 plymouth_0.9.3-3 po-debconf_1.0.20 poppler-data_0.4.9-2 preview-latex-style_11.91-1 procps_2:3.3.15-1 python_2.7.15~rc1-1 python-minimal_2.7.15~rc1-1 python2.7_2.7.15-1 python2.7-minimal_2.7.15-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-altree-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 t1utils_1.41-2 tar_1.30+dfsg-2 tex-common_6.09 texlive-base_2018.20180505-1 texlive-binaries_2018.20180416.47457-4 texlive-fonts-recommended_2018.20180505-1 texlive-lang-french_2018.20180505-1 texlive-latex-base_2018.20180505-1 texlive-latex-extra_2018.20180505-1 texlive-latex-recommended_2018.20180505-1 texlive-pictures_2018.20180505-1 tzdata_2018e-1 ucf_3.0038 udev_238-4 util-linux_2.31.1-0.5 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Jun 7 08:02:13 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./altree_1.3.1-7.dsc
dpkg-source: info: extracting altree in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking altree_1.3.1.orig.tar.gz
dpkg-source: info: unpacking altree_1.3.1-7.debian.tar.xz
dpkg-source: info: applying from-upstream-no-nested-functions.patch
dpkg-source: info: applying no-quicksort.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-b74b020d-f7a6-4e1a-b66f-bb8e728b5004
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package altree
dpkg-buildpackage: info: source version 1.3.1-7
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build altree-1.3.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C Documentation distclean
make[2]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[2]: Nothing to be done for 'distclean'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
dh_auto_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro"
Checking if your kit is complete...
Looks good
MakeMaker (v7.24)
Warning (non-fatal): Target 'dynamic' depends on targets in skipped section 'dynamic_lib'
Warning (non-fatal): Target 'static' depends on targets in skipped section 'static_lib'
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for altree
Writing MYMETA.yml and MYMETA.json
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C Documentation pdf
make[2]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[3]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[3]: Nothing to be done for 'LU_WATCH_FILES_SAVE'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.pdf <======
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx) Please, consider switching to 'figlatex' package
(texgraphicx) on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps'
(texdepends) Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: Reference `fig:altree' on page 2 undefined on input line 121.
Package texdepends Warning: No 'fig/overview.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 124.
Package texdepends Warning: Figure 'fig/overview.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 124.
LaTeX Warning: Reference `fig:nesting_algo' on page 2 undefined on input line 143.
Package natbib Warning: Citation `Bardel05' on page 2 undefined on input line 143.
Package natbib Warning: Citation `Ge03' on page 2 undefined on input line 146.
Package natbib Warning: Citation `Becker04' on page 2 undefined on input line 146.
Package texdepends Warning: No 'fig/altree-q.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 150.
Package texdepends Warning: Figure 'fig/altree-q.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 150.
LaTeX Warning: `h' float specifier changed to `ht'.
Package natbib Warning: Citation `Bardel05' on page 4 undefined on input line 180.
Package natbib Warning: Citation `Stephens01' on page 5 undefined on input line 197.
Package natbib Warning: Citation `Stephens03' on page 5 undefined on input line 197.
Package natbib Warning: Citation `Becker04' on page 5 undefined on input line 198.
Package natbib Warning: Citation `Swofford02' on page 5 undefined on input line 199.
Package natbib Warning: Citation `Felsenstein04' on page 5 undefined on input line 200.
Package natbib Warning: Citation `YangPAML' on page 5 undefined on input line 200.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Package natbib Warning: Citation `Swofford02' on page 7 undefined on input line 278.
Package natbib Warning: Citation `Felsenstein04' on page 7 undefined on input line 281.
Underfull \hbox (badness 1142) in paragraph at lines 281--284
[]\T1/pcr/m/n/10.95 phylip \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-
Package natbib Warning: Citation `YangPAML' on page 7 undefined on input line 284.
Package natbib Warning: Citation `Guindon03' on page 7 undefined on input line 288.
Underfull \hbox (badness 2486) in paragraph at lines 284--290
[]\T1/pcr/m/n/10.95 paml \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-ab
Underfull \hbox (badness 10000) in paragraph at lines 314--315
Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
[]
Underfull \hbox (badness 10000) in paragraph at lines 396--397
Underfull \hbox (badness 10000) in paragraph at lines 400--401
Underfull \hbox (badness 10000) in paragraph at lines 416--417
Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
[]
LaTeX Warning: Reference `help' on page 13 undefined on input line 564.
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$
LaTeX Warning: Reference `description_etiquette' on page 14 undefined on input line 632.
LaTeX Warning: Reference `description_etiquette' on page 14 undefined on input line 633.
Package natbib Warning: Citation `Bardel05' on page 14 undefined on input line 634.
LaTeX Warning: Reference `description_etiquette' on page 15 undefined on input line 649.
LaTeX Warning: Reference `description_etiquette' on page 15 undefined on input line 649.
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
[]
LaTeX Warning: Reference `help' on page 16 undefined on input line 701.
Underfull \hbox (badness 10000) in paragraph at lines 735--738
Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Package natbib Warning: Citation `Ge03' on page 19 undefined on input line 830.
Package natbib Warning: Citation `Becker04' on page 19 undefined on input line 830.
LaTeX Warning: Reference `fig:option_b' on page 19 undefined on input line 846.
LaTeX Warning: File `option_b.fig' not found on input line 852.
Package texdepends Warning: No 'fig/option_b_1.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 852.
Package texdepends Warning: Figure 'fig/option_b_1.fig' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 852.
LaTeX Warning: File `option_b.fig' not found on input line 853.
Package texdepends Warning: No 'fig/option_b_2.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 853.
Package texdepends Warning: Figure 'fig/option_b_2.fig' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 853.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 921.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 941.
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Package texdepends Warning: No 'fig/create_file_paup.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1009.
Package texdepends Warning: Figure 'fig/create_file_paup.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1009.
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put
Package texdepends Warning: No 'fig/create_file_phy.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1043.
Package texdepends Warning: Figure 'fig/create_file_phy.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1043.
Package texdepends Warning: No 'fig/association_paup.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1104.
Package texdepends Warning: Figure 'fig/association_paup.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1104.
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Package texdepends Warning: No 'fig/localisation_paup.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1130.
Package texdepends Warning: Figure 'fig/localisation_paup.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1130.
Package texdepends Warning: No 'fig/association_phylip.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1168.
Package texdepends Warning: Figure 'fig/association_phylip.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1168.
Package natbib Warning: Citation `Guindon03' on page 28 undefined on input line 1181.
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Package texdepends Warning: No 'fig/association_paml.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1217.
Package texdepends Warning: Figure 'fig/association_paml.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1217.
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Package texdepends Warning: No 'fig/localisation_paml.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 1252.
Package texdepends Warning: Figure 'fig/localisation_paml.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 1252.
Chapter 7.
Package texdepends Warning: Figure(s) missing. Check dependencies again.
Package natbib Warning: There were undefined citations.
Package rerunfilecheck Warning: File `manual.out' has changed.
(rerunfilecheck) Rerun to get outlines right
(rerunfilecheck) or use package `bookmark'.
LaTeX Warning: There were undefined references.
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[3]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
LaTeX.mk:801: fig/option_b.subfig.mk: No such file or directory
======> building fig/option_b.subfig.mk <======
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[3]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
********************************************
*********** New build needed ***************
********************************************
New manual.aux file
LU_rebuild_latex: new run needed (LaTeX message 'Rerun to get...')
LU_rebuild_texdepends: new depends required
********************************************
/usr/bin/make LU_REC_LEVEL=2 manual.pdf
make[4]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.bbl <======
This is BibTeX, Version 0.99d (TeX Live 2018/Debian)
The top-level auxiliary file: manual.aux
The style file: plainnat.bst
Database file #1: stage.bib
Warning--empty year in YangPAML
(There was 1 warning)
======> building fig/overview.pdftex <======
======> building fig/overview.pdftex_t <======
======> building fig/altree-q.pdftex <======
======> building fig/altree-q.pdftex_t <======
======> building fig/option_b_1.fig <======
======> building fig/option_b_2.fig <======
======> building fig/create_file_paup.pdftex <======
======> building fig/create_file_paup.pdftex_t <======
======> building fig/create_file_phy.pdftex <======
======> building fig/create_file_phy.pdftex_t <======
======> building fig/association_paup.pdftex <======
======> building fig/association_paup.pdftex_t <======
======> building fig/localisation_paup.pdftex <======
======> building fig/localisation_paup.pdftex_t <======
======> building fig/association_phylip.pdftex <======
======> building fig/association_phylip.pdftex_t <======
======> building fig/association_paml.pdftex <======
======> building fig/association_paml.pdftex_t <======
======> building fig/localisation_paml.pdftex <======
======> building fig/localisation_paml.pdftex_t <======
Previous compilation failed. Rerun needed
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[5]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.pdf <======
removed 'manual.pdf_NEED_REBUILD'
removed 'manual.pdf.mk'
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx) Please, consider switching to 'figlatex' package
(texgraphicx) on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps'
(texdepends) Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
Package natbib Warning: Citation `Bardel05' on page 3 undefined on input line 143.
Package natbib Warning: Citation `Ge03' on page 3 undefined on input line 146.
Package natbib Warning: Citation `Becker04' on page 3 undefined on input line 146.
LaTeX Warning: `h' float specifier changed to `ht'.
Package natbib Warning: Citation `Bardel05' on page 4 undefined on input line 180.
Package natbib Warning: Citation `Stephens01' on page 4 undefined on input line 197.
Package natbib Warning: Citation `Stephens03' on page 4 undefined on input line 197.
Package natbib Warning: Citation `Becker04' on page 4 undefined on input line 198.
Package natbib Warning: Citation `Swofford02' on page 4 undefined on input line 199.
Package natbib Warning: Citation `Felsenstein04' on page 4 undefined on input line 200.
Package natbib Warning: Citation `YangPAML' on page 4 undefined on input line 200.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Package natbib Warning: Citation `Swofford02' on page 7 undefined on input line 278.
Package natbib Warning: Citation `Felsenstein04' on page 7 undefined on input line 281.
Underfull \hbox (badness 1142) in paragraph at lines 281--284
[]\T1/pcr/m/n/10.95 phylip \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-
Package natbib Warning: Citation `YangPAML' on page 7 undefined on input line 284.
Package natbib Warning: Citation `Guindon03' on page 7 undefined on input line 288.
Underfull \hbox (badness 2486) in paragraph at lines 284--290
[]\T1/pcr/m/n/10.95 paml \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-ab
Underfull \hbox (badness 10000) in paragraph at lines 314--315
Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
[]
Underfull \hbox (badness 10000) in paragraph at lines 396--397
Underfull \hbox (badness 10000) in paragraph at lines 400--401
Underfull \hbox (badness 10000) in paragraph at lines 416--417
Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
[]
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$
Package natbib Warning: Citation `Bardel05' on page 14 undefined on input line 634.
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
[]
Underfull \hbox (badness 10000) in paragraph at lines 735--738
Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Package natbib Warning: Citation `Ge03' on page 19 undefined on input line 830.
Package natbib Warning: Citation `Becker04' on page 19 undefined on input line 830.
Package texdepends Warning: No 'fig/option_b_1.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 852.
Package texdepends Warning: Figure 'fig/option_b_1.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 852.
Package texdepends Warning: No 'fig/option_b_2.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 853.
Package texdepends Warning: Figure 'fig/option_b_2.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 853.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 921.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 941.
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Package natbib Warning: Citation `Guindon03' on page 26 undefined on input line 1181.
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Chapter 7.
Underfull \hbox (badness 10000) in paragraph at lines 58--61
[]\T1/ptm/m/n/10.95 Z Yang. Phy-lo-ge-netic anal-y-sis by max-i-mum like-li-ho
Package texdepends Warning: Figure(s) missing. Check dependencies again.
Package natbib Warning: There were undefined citations.
Package natbib Warning: Citation(s) may have changed.
(natbib) Rerun to get citations correct.
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[5]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[5]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
********************************************
*********** New build needed ***************
********************************************
New manual.aux file
LU_rebuild_latex: new run needed (LaTeX message 'Rerun to get...')
LU_rebuild_texdepends: new depends required
********************************************
/usr/bin/make LU_REC_LEVEL=3 manual.pdf
make[6]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.bbl <======
This is BibTeX, Version 0.99d (TeX Live 2018/Debian)
The top-level auxiliary file: manual.aux
The style file: plainnat.bst
Database file #1: stage.bib
Warning--empty year in YangPAML
(There was 1 warning)
======> building fig/option_b_1.pdftex <======
======> building fig/option_b_1.pdftex_t <======
======> building fig/option_b_2.pdftex <======
======> building fig/option_b_2.pdftex_t <======
Previous compilation failed. Rerun needed
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[7]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.pdf <======
removed 'manual.pdf_NEED_REBUILD'
removed 'manual.pdf.mk'
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx) Please, consider switching to 'figlatex' package
(texgraphicx) on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps'
(texdepends) Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: `h' float specifier changed to `ht'.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Underfull \hbox (badness 10000) in paragraph at lines 314--315
Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
[]
Underfull \hbox (badness 10000) in paragraph at lines 396--397
Underfull \hbox (badness 10000) in paragraph at lines 400--401
Underfull \hbox (badness 10000) in paragraph at lines 416--417
Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
[]
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
[]
Underfull \hbox (badness 10000) in paragraph at lines 735--738
Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Chapter 7.
Underfull \hbox (badness 10000) in paragraph at lines 58--61
[]\T1/ptm/m/n/10.95 Z Yang. Phy-lo-ge-netic anal-y-sis by max-i-mum like-li-ho
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[7]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[7]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
********************************************
*********** New build needed ***************
********************************************
New manual.aux file
LU_rebuild_latex: new run needed (LaTeX message 'Rerun to get...')
********************************************
/usr/bin/make LU_REC_LEVEL=4 manual.pdf
make[8]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.bbl <======
This is BibTeX, Version 0.99d (TeX Live 2018/Debian)
The top-level auxiliary file: manual.aux
The style file: plainnat.bst
Database file #1: stage.bib
Warning--empty year in YangPAML
(There was 1 warning)
Previous compilation failed. Rerun needed
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[9]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.pdf <======
removed 'manual.pdf_NEED_REBUILD'
removed 'manual.pdf.mk'
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx) Please, consider switching to 'figlatex' package
(texgraphicx) on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps'
(texdepends) Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: `h' float specifier changed to `ht'.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Underfull \hbox (badness 10000) in paragraph at lines 314--315
Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
[]
Underfull \hbox (badness 10000) in paragraph at lines 396--397
Underfull \hbox (badness 10000) in paragraph at lines 400--401
Underfull \hbox (badness 10000) in paragraph at lines 416--417
Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
[]
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
[]
Underfull \hbox (badness 10000) in paragraph at lines 735--738
Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Chapter 7.
Underfull \hbox (badness 10000) in paragraph at lines 58--61
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[9]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[9]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
/usr/bin/make LU_REC_LEVEL=5 manual.pdf
make[10]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[10]: 'manual.pdf' is up to date.
make[10]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[8]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
dh_auto_build
make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp progs/altree blib/script/altree
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree
cp progs/altree-convert blib/script/altree-convert
cp progs/altree-add-S blib/script/altree-add-S
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-add-S
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-convert
cp ALTree/Tree.pm blib/lib/ALTree/Tree.pm
cp ALTree/Base.pm blib/lib/ALTree/Base.pm
cp ALTree/Node.pm blib/lib/ALTree/Node.pm
cp ALTree/Nanova.pm blib/lib/ALTree/Nanova.pm
cp ALTree/Chi2.pm blib/lib/ALTree/Chi2.pm
cp ALTree/Input.pm blib/lib/ALTree/Input.pm
cp ALTree/SitePerTree.pm blib/lib/ALTree/SitePerTree.pm
cp ALTree/Foret.pm blib/lib/ALTree/Foret.pm
cp ALTree/Site.pm blib/lib/ALTree/Site.pm
cp ALTree/to_rewrite.pm blib/lib/ALTree/to_rewrite.pm
cp ALTree/Utils.pm blib/lib/ALTree/Utils.pm
cp ALTree/Sens.pm blib/lib/ALTree/Sens.pm
cp ALTree/SitePerForet.pm blib/lib/ALTree/SitePerForet.pm
cp ALTree/SiteSensPerForet.pm blib/lib/ALTree/SiteSensPerForet.pm
cp ALTree/Import.pm blib/lib/ALTree/Import.pm
cp ALTree/SiteSens.pm blib/lib/ALTree/SiteSens.pm
cp ALTree/SiteCollection.pm blib/lib/ALTree/SiteCollection.pm
cp ALTree/SiteSensPerTree.pm blib/lib/ALTree/SiteSensPerTree.pm
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
make -C c_sources
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" chisq.c
Running Mkbootstrap for CUtils ()
chmod 644 "CUtils.bs"
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" double_permutation.c
cp lib/ALTree/CUtils.pm ../blib/lib/ALTree/CUtils.pm
AutoSplitting ../blib/lib/ALTree/CUtils.pm (../blib/lib/auto/ALTree/CUtils)
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" fisher.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" mt19937ar.c
chisq.c: In function 'pochisq':
chisq.c:81:19: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized]
double a, y, s;
^
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" myrand.c
"/usr/bin/perl" "/usr/share/perl/5.26.2/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.26/ExtUtils/typemap' CUtils.xs > CUtils.xsc
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" resampling.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" rhyper.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" stats.c
Please specify prototyping behavior for CUtils.xs (see perlxs manual)
mv CUtils.xsc CUtils.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" z.c
z.c:12:13: warning: 'sccsfid' defined but not used [-Wunused-variable]
static char sccsfid[] = "@(#) z.c 5.1 (|stat) 12/26/85";
^~~~~~~
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
arm-linux-gnueabihf-gcc -c -ggdb3 -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"1.1\" -DXS_VERSION=\"1.1\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" CUtils.c
ar cr libaltree-cutils.a chisq.o double_permutation.o fisher.o mt19937ar.o myrand.o resampling.o rhyper.o stats.o z.o
: libaltree-cutils.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
In file included from CUtils.xs:5:0:
ppport.h:237:0: warning: "PERL_UNUSED_DECL" redefined
# define PERL_UNUSED_DECL
In file included from CUtils.xs:2:0:
/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE/perl.h:323:0: note: this is the location of the previous definition
# define PERL_UNUSED_DECL __attribute__unused__
CUtils.xs: In function 'XS_ALTree__CUtils_RHyper':
CUtils.xs:69:16: warning: implicit declaration of function 'rhyper'; did you mean 'hypot'? [-Wimplicit-function-declaration]
RETVAL=rhyper(n1, n2, k);
^~~~~~
hypot
rm -f ../blib/arch/auto/ALTree/CUtils/CUtils.so
arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -shared -L/usr/local/lib -fstack-protector-strong CUtils.o -o ../blib/arch/auto/ALTree/CUtils/CUtils.so c_sources/libaltree-cutils.a \
-lm -lpthread -lgsl -lcblas \
chmod 755 ../blib/arch/auto/ALTree/CUtils/CUtils.so
Manifying 1 pod document
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
Manifying 3 pod documents
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 test TEST_VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
Manifying 1 pod document
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
No tests defined for ALTree::CUtils extension.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, '../blib/lib', '../blib/arch')" t/*.t
t/ALTree-CUtils.t .......
1..1
ok 1 - use ALTree::CUtils;
ok
t/double_permutation.t ..
1..3
ok 1 - use ALTree::CUtils;
ok 2 - undef when bad args
ok 3 - double_permutation
ok
All tests successful.
Files=2, Tests=4, 2 wallclock secs ( 0.15 usr 0.03 sys + 0.83 cusr 0.11 csys = 1.12 CPU)
Result: PASS
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/ALTree.t ..
1..1
ok 1 - use ALTree::Import;
ok
All tests successful.
Files=1, Tests=1, 1 wallclock secs ( 0.13 usr 0.02 sys + 0.70 cusr 0.08 csys = 0.93 CPU)
Result: PASS
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
Manifying 1 pod document
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
Manifying 3 pod documents
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/CUtils.so
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/autosplit.ix
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Tree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Base.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Node.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Nanova.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Chi2.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Input.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerTree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Foret.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Site.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/to_rewrite.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Utils.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Sens.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerForet.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerForet.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Import.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSens.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteCollection.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerTree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/CUtils.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree-add-S.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree-convert.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man3/ALTree::CUtils.3pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree-add-S
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree-convert
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/altree/usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/CUtils.so was not linked against libcblas.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'altree' in '../altree_1.3.1-7_armhf.deb'.
dpkg-deb: building package 'altree-dbgsym' in '../altree-dbgsym_1.3.1-7_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../altree_1.3.1-7_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build altree-1.3.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-06-12T05:12:10Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
altree_1.3.1-7_armhf.changes:
-----------------------------
Format: 1.8
Date: Thu, 07 Jun 2018 09:52:24 +0200
Source: altree
Binary: altree altree-examples
Architecture: armhf
Version: 1.3.1-7
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
altree - program to perform phylogeny-based association and localization a
altree-examples - example files for ALTree
Closes: 900836
Changes:
altree (1.3.1-7) unstable; urgency=medium
.
* Build-Depends: fig2dev
Closes: #900836
Checksums-Sha1:
42eda3ad339ab24fba16b5ef3bc150eab1116934 288156 altree-dbgsym_1.3.1-7_armhf.deb
1491893073d40051af41e9b501bea3c0b08e7cce 7825 altree_1.3.1-7_armhf.buildinfo
0b63c15fadc2410a4818b4e0d471fa83c76df653 332984 altree_1.3.1-7_armhf.deb
Checksums-Sha256:
9764df5b0e9a212378ed4ebd2d310f714fc008ededc1d4186593b5efb2ce3491 288156 altree-dbgsym_1.3.1-7_armhf.deb
5d51f8f37228529fb7e138c615d28acae4f580eee1957035570842d2336096ab 7825 altree_1.3.1-7_armhf.buildinfo
79e004d0c4ce33815093701e0275ffc7fdcc7d04abaebc65044fd098648daaea 332984 altree_1.3.1-7_armhf.deb
Files:
87881eae95b87dc4286b60e377956138 288156 debug optional altree-dbgsym_1.3.1-7_armhf.deb
b17adec0887c1ead8f1bab04f9fb61a6 7825 science optional altree_1.3.1-7_armhf.buildinfo
2f96a21b594c50ba5cdca89457f8f8ca 332984 science optional altree_1.3.1-7_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
altree-dbgsym_1.3.1-7_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 288156 bytes: control archive=532 bytes.
366 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: altree-dbgsym
Source: altree
Version: 1.3.1-7
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 298
Depends: altree (= 1.3.1-7)
Section: debug
Priority: optional
Description: debug symbols for altree
Build-Ids: 697236402030a6519256229e4effbc8b781a1835
drwxr-xr-x root/root 0 2018-06-07 07:52 ./
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/debug/.build-id/69/
-rw-r--r-- root/root 294592 2018-06-07 07:52 ./usr/lib/debug/.build-id/69/7236402030a6519256229e4effbc8b781a1835.debug
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-06-07 07:52 ./usr/share/doc/altree-dbgsym -> altree
altree_1.3.1-7_armhf.deb
------------------------
new Debian package, version 2.0.
size 332984 bytes: control archive=1672 bytes.
757 bytes, 15 lines control
2790 bytes, 34 lines md5sums
Package: altree
Version: 1.3.1-7
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 534
Depends: libatlas3-base, libc6 (>= 2.4), libgsl23, perl (>= 5.26.2-5), perlapi-5.26.2, libmath-tamuanova-perl
Suggests: altree-examples
Section: science
Priority: optional
Homepage: https://gitlab.inria.fr/NGS/ALTree
Description: program to perform phylogeny-based association and localization analysis
ALTree was designed to perform association detection and localization of
susceptibility sites using haplotype phylogenetic trees: first, it allows the
detection of an association between a candidate gene and a disease, and second,
it enables to make hypothesis about the susceptibility loci.
drwxr-xr-x root/root 0 2018-06-07 07:52 ./
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/bin/
-rwxr-xr-x root/root 55855 2018-06-07 07:52 ./usr/bin/altree
-rwxr-xr-x root/root 15365 2018-06-07 07:52 ./usr/bin/altree-add-S
-rwxr-xr-x root/root 22801 2018-06-07 07:52 ./usr/bin/altree-convert
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/
-rw-r--r-- root/root 342 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Base.pm
-rw-r--r-- root/root 3081 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/CUtils.pm
-rw-r--r-- root/root 2897 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Chi2.pm
-rw-r--r-- root/root 2817 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Foret.pm
-rw-r--r-- root/root 2026 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Import.pm
-rw-r--r-- root/root 24521 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Input.pm
-rw-r--r-- root/root 2371 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Nanova.pm
-rw-r--r-- root/root 5965 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Node.pm
-rw-r--r-- root/root 1455 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Sens.pm
-rw-r--r-- root/root 1895 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Site.pm
-rw-r--r-- root/root 1044 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteCollection.pm
-rw-r--r-- root/root 3569 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerForet.pm
-rw-r--r-- root/root 876 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerTree.pm
-rw-r--r-- root/root 1287 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSens.pm
-rw-r--r-- root/root 905 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerForet.pm
-rw-r--r-- root/root 2781 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerTree.pm
-rw-r--r-- root/root 4804 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Tree.pm
-rw-r--r-- root/root 1467 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Utils.pm
-rw-r--r-- root/root 9288 2012-11-03 13:24 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/to_rewrite.pm
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/
-rw-r--r-- root/root 60912 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/CUtils.so
-rw-r--r-- root/root 95 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/autosplit.ix
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc-base/
-rw-r--r-- root/root 513 2018-06-07 07:52 ./usr/share/doc-base/altree
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc/altree/
-rw-r--r-- root/root 1441 2012-10-28 20:50 ./usr/share/doc/altree/README
-rw-r--r-- root/root 2921 2018-06-07 07:52 ./usr/share/doc/altree/changelog.Debian.gz
-rw-r--r-- root/root 2385 2012-11-03 14:11 ./usr/share/doc/altree/changelog.gz
-rw-r--r-- root/root 1202 2018-06-07 07:52 ./usr/share/doc/altree/copyright
-rw-r--r-- root/root 265990 2018-06-07 07:52 ./usr/share/doc/altree/manual.pdf
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/man/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/man/man1/
-rw-r--r-- root/root 1965 2018-06-07 07:52 ./usr/share/man/man1/altree-add-S.1p.gz
-rw-r--r-- root/root 2030 2018-06-07 07:52 ./usr/share/man/man1/altree-convert.1p.gz
-rw-r--r-- root/root 3047 2018-06-07 07:52 ./usr/share/man/man1/altree.1p.gz
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/man/man3/
-rw-r--r-- root/root 1803 2018-06-07 07:52 ./usr/share/man/man3/ALTree::CUtils.3pm.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 16024
Build-Time: 97
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1293
Job: altree_1.3.1-7
Machine Architecture: armhf
Package: altree
Package-Time: 1442
Source-Version: 1.3.1-7
Space: 16024
Status: successful
Version: 1.3.1-7
--------------------------------------------------------------------------------
Finished at 2018-06-12T05:12:10Z
Build needed 00:24:02, 16024k disc space