altree →
1.3.1-7+b2 →
armhf → 2019-10-14 12:18:27
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| altree 1.3.1-7+b2 (armhf) Mon, 14 Oct 2019 11:43:06 +0000 |
+==============================================================================+
Package: altree
Version: 1.3.1-7+b2
Source Version: 1.3.1-7
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-c453b364-2970-4466-9645-5b61aa490288' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.4 MB in 29s (853 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'altree' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/altree.git
Please use:
git clone https://salsa.debian.org/med-team/altree.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 517 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main altree 1.3.1-7 (dsc) [2273 B]
Get:2 http://172.17.0.1/private bullseye-staging/main altree 1.3.1-7 (tar) [509 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main altree 1.3.1-7 (diff) [6160 B]
Fetched 517 kB in 0s (1499 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/altree-SMdir9/altree-1.3.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/altree-SMdir9' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-mvrwA6/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-mvrwA6/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-mvrwA6/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Packages [430 B]
Fetched 2106 B in 1s (2789 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libperl5.28 netbase perl-modules-5.28
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14039 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: bash-completion, debhelper (>= 11~), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl, fig2dev
Filtered Build-Depends: bash-completion, debhelper (>= 11~), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl, fig2dev
dpkg-deb: building package 'sbuild-build-depends-altree-dummy' in '/<<BUILDDIR>>/resolver-mvrwA6/apt_archive/sbuild-build-depends-altree-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-altree-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Sources [600 B]
Get:5 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ Packages [682 B]
Fetched 2615 B in 1s (3426 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install altree build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libperl5.28 netbase perl-modules-5.28
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils
debhelper dh-autoreconf dh-strip-nondeterminism dwz fig2dev file
fontconfig-config fonts-dejavu-core fonts-lmodern fonts-urw-base35 gawk
gettext gettext-base ghostscript groff-base intltool-debian latex-make
libarchive-zip-perl libatlas-base-dev libatlas3-base libavahi-client3
libavahi-common-data libavahi-common3 libbsd0 libcairo2 libcroco3 libcups2
libcupsimage2 libdbus-1-3 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5
libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl23
libgslcblas0 libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6
libicu63 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo
libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2
libmagic-mgc libmagic1 libmath-tamuanova-perl libmpdec2 libncurses6
libnetpbm10 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0
libpng16-16 libptexenc1 libpython-stdlib libpython2-stdlib
libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsm6 libssl1.1
libsub-override-perl libsynctex2 libtamuanova-0.2 libteckit0
libtest-deep-perl libtexlua53 libtexluajit2 libtiff5 libtinfo5 libtool
libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4
libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support netpbm po-debconf
poppler-data preview-latex-style python python-minimal python2
python2-minimal python2.7 python2.7-minimal python3 python3-minimal
python3.7 python3.7-minimal sensible-utils t1utils tex-common texlive-base
texlive-binaries texlive-fonts-recommended texlive-lang-french
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures ucf x11-common xdg-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make xfig fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre
gawk-doc gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x groff
libatlas-doc liblapack-doc cups-common gsl-ref-psdoc | gsl-doc-pdf
| gsl-doc-info | gsl-ref-html krb5-doc krb5-user liblcms2-utils libtool-doc
gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho
fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai
fonts-arphic-uming fonts-nanum python-doc python-tk python2-doc
python2.7-doc binfmt-support python3-doc python3-tk python3-venv
python3.7-venv python3.7-doc perl-tk xpdf | pdf-viewer xzdec
texlive-fonts-recommended-doc texlive-latex-base-doc python-pygments
icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl
texlive-latex-extra-doc texlive-latex-recommended-doc texlive-luatex
texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby
texlive-pictures-doc vprerex
Recommended packages:
curl | wget | lynx inkscape libcupsfilters1 dbus libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
krb5-locales libgpm2 libltdl-dev libmail-sendmail-perl lmodern dvisvgm
tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils
debhelper dh-autoreconf dh-strip-nondeterminism dwz fig2dev file
fontconfig-config fonts-dejavu-core fonts-lmodern fonts-urw-base35 gawk
gettext gettext-base ghostscript groff-base intltool-debian latex-make
libarchive-zip-perl libatlas-base-dev libatlas3-base libavahi-client3
libavahi-common-data libavahi-common3 libbsd0 libcairo2 libcroco3 libcups2
libcupsimage2 libdbus-1-3 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5
libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl23
libgslcblas0 libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6
libicu63 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo
libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2
libmagic-mgc libmagic1 libmath-tamuanova-perl libmpdec2 libncurses6
libnetpbm10 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0
libpng16-16 libptexenc1 libpython-stdlib libpython2-stdlib
libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsm6 libssl1.1
libsub-override-perl libsynctex2 libtamuanova-0.2 libteckit0
libtest-deep-perl libtexlua53 libtexluajit2 libtiff5 libtinfo5 libtool
libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4
libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support netpbm po-debconf
poppler-data preview-latex-style python python-minimal python2
python2-minimal python2.7 python2.7-minimal python3 python3-minimal
python3.7 python3.7-minimal sbuild-build-depends-altree-dummy sensible-utils
t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended
texlive-lang-french texlive-latex-base texlive-latex-extra
texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils
0 upgraded, 148 newly installed, 0 to remove and 4 not upgraded.
Need to get 196 MB of archives.
After this operation, 570 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-mvrwA6/apt_archive ./ sbuild-build-depends-altree-dummy 0.invalid.0 [968 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20190803-1 [314 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.8.7-3 [1254 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf gawk armhf 1:4.2.1+dfsg-1.1+b1 [590 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-minimal armhf 2.7.17~rc1-1 [395 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf python2.7-minimal armhf 2.7.17~rc1-1 [1093 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python2-minimal armhf 2.7.16-1 [41.4 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf python-minimal armhf 2.7.16-1 [21.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-1 [1269 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-stdlib armhf 2.7.17~rc1-1 [1821 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf python2.7 armhf 2.7.17~rc1-1 [309 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libpython2-stdlib armhf 2.7.16-1 [20.8 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libpython-stdlib armhf 2.7.16-1 [20.8 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf python2 armhf 2.7.16-1 [41.6 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf python armhf 2.7.16-1 [22.8 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.5~rc1-2 [584 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.5~rc1-2 [1524 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.5-1 [36.6 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.5~rc1-2 [1667 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.5~rc1-2 [347 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.5-1 [20.1 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.5-1 [61.5 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.12 [53.1 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf bash-completion all 1:2.8-6 [208 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.37-5 [253 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.37-5 [111 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.37-5 [66.2 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-11 [547 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.65-1 [95.8 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.0-1 [23.3 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.0-1 [14.3 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-1 [69.7 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.6.1 [172 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.1-1 [1134 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b2 [571 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20190803-1 [79.3 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.6.1 [993 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf fonts-urw-base35 all 20170801.1-3 [6333 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libgs9-common all 9.27~dfsg-3.1 [721 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.7-4+b2 [122 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.7-4+b2 [51.0 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.16-2 [189 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.7-4+b2 [54.1 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6-6 [14.0 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.3.0-5+rpi1 [304 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libcupsimage2 armhf 2.3.0-5+rpi1 [120 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-1 [274 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.9.1-4 [317 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libidn11 armhf 1.33-2.2 [113 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libijs-0.35 armhf 0.35-15 [14.7 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libjbig2dec0 armhf 0.17-1 [55.5 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.0.10+git191003-1 [241 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libgs9 armhf 9.27~dfsg-3.1 [1843 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf ghostscript armhf 9.27~dfsg-3.1 [94.5 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libnetpbm10 armhf 2:10.0-15.3+b1 [75.3 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf netpbm armhf 2:10.0-15.3+b1 [881 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf fig2dev armhf 1:3.2.7a-7 [602 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf latex-make all 2.3.0-1 [800 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-8+rpi1 [231 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libatlas3-base armhf 3.10.3-8+rpi1 [2399 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libatlas-base-dev armhf 3.10.3-8+rpi1 [2966 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-8 [70.5 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.5+dfsg-6 [79.0 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libgsl23 armhf 2.5+dfsg-6 [704 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libgsl-dev armhf 2.5+dfsg-6 [893 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.2-1 [1286 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz-icu0 armhf 2.6.2-1 [967 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2019.20190605.51237-3 [159 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libtamuanova-0.2 armhf 0.2-4+b2 [7760 B]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libmath-tamuanova-perl armhf 1.0.2-2+b7 [12.4 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2019.20190605.51237-3 [60.0 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2019.20190605.51237-3 [68.8 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libtest-deep-perl all 1.128-1 [48.8 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2019.20190605.51237-3 [99.7 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2019.20190605.51237-3 [206 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2019.20190605.51237-3 [5748 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2019.20190930-1 [20.6 MB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2019.20190930-1 [5228 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf texlive-lang-french all 2019.20190930-1 [59.1 MB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2019.20190930-1 [989 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2019.20190930-1 [15.2 MB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2019.20190930-1 [11.0 MB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2019.20190930-3 [12.7 MB]
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update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
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Setting up libharfbuzz0b:armhf (2.6.2-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up python (2.7.16-1) ...
Setting up libavahi-client3:armhf (0.7-4+b2) ...
Setting up libpython3-stdlib:armhf (3.7.5-1) ...
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up python3.7 (3.7.5~rc1-2) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libharfbuzz-icu0:armhf (2.6.2-1) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python3 (3.7.5-1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up man-db (2.8.7-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up tex-common (6.12) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up latex-make (2.3.0-1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up libcups2:armhf (2.3.0-5+rpi1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up po-debconf (1.0.21) ...
Setting up preview-latex-style (11.91-2) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libcupsimage2:armhf (2.3.0-5+rpi1) ...
Setting up texlive-binaries (2019.20190605.51237-3) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up texlive-base (2019.20190930-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up libgs9:armhf (9.27~dfsg-3.1) ...
Setting up ghostscript (9.27~dfsg-3.1) ...
Setting up fig2dev (1:3.2.7a-7) ...
Setting up texlive-lang-french (2019.20190930-1) ...
Setting up texlive-latex-base (2019.20190930-1) ...
Setting up texlive-latex-recommended (2019.20190930-1) ...
Setting up texlive-pictures (2019.20190930-1) ...
Setting up texlive-fonts-recommended (2019.20190930-1) ...
Setting up texlive-latex-extra (2019.20190930-3) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.6.0-1) ...
Setting up debhelper (12.6.1) ...
Setting up sbuild-build-depends-altree-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-2+rpi1) ...
Processing triggers for tex-common (6.12) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.32.51.20190909-1+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-8+rpi1 gcc-9_9.2.1-8+rpi1 libc6-dev_2.29-2+rpi1 libstdc++-9-dev_9.2.1-8+rpi1 libstdc++6_9.2.1-8+rpi1 linux-libc-dev_4.18.20-2+rpi1+b1
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.46 bash_5.0-4 bash-completion_1:2.8-6 binutils_2.32.51.20190909-1+rpi1 binutils-arm-linux-gnueabihf_2.32.51.20190909-1+rpi1 binutils-common_2.32.51.20190909-1+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3 cpp_4:9.2.1-3+rpi1 cpp-9_9.2.1-8+rpi1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.6.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.0-1 diffutils_1:3.7-3 dirmngr_2.2.17-3+b1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-1 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 fig2dev_1:3.2.7a-7 file_1:5.37-5 findutils_4.7.0-1 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 fonts-urw-base35_20170801.1-3 g++_4:9.2.1-3+rpi1 g++-9_9.2.1-8+rpi1 gawk_1:4.2.1+dfsg-1.1+b1 gcc_4:9.2.1-3+rpi1 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-6-base_6.5.0-1+rpi1+b3 gcc-7-base_7.4.0-14 gcc-9_9.2.1-8+rpi1 gcc-9-base_9.2.1-8+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 ghostscript_9.27~dfsg-3.1 gnupg_2.2.17-3 gnupg-l10n_2.2.17-3 gnupg-utils_2.2.17-3+b1 gpg_2.2.17-3+b1 gpg-agent_2.2.17-3+b1 gpg-wks-client_2.2.17-3+b1 gpg-wks-server_2.2.17-3+b1 gpgconf_2.2.17-3+b1 gpgsm_2.2.17-3+b1 gpgv_2.2.17-3+b1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.22 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 latex-make_2.3.0-1 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.65-1 libasan5_9.2.1-8+rpi1 libassuan0_2.5.3-7 libatlas-base-dev_3.10.3-8+rpi1 libatlas3-base_3.10.3-8+rpi1 libatomic1_9.2.1-8+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libavahi-client3_0.7-4+b2 libavahi-common-data_0.7-4+b2 libavahi-common3_0.7-4+b2 libbinutils_2.32.51.20190909-1+rpi1 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-2+rpi1 libc-dev-bin_2.29-2+rpi1 libc6_2.29-2+rpi1 libc6-dev_2.29-2+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2 libcc1-0_9.2.1-8+rpi1 libcom-err2_1.45.4-1 libcroco3_0.6.13-1 libcups2_2.3.0-5+rpi1 libcupsimage2_2.3.0-5+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.16-2 libdebconfclient0_0.249 libdebhelper-perl_12.6.1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.0-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-4 libgcc-9-dev_9.2.1-8+rpi1 libgcc1_1:9.2.1-8+rpi1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-8+rpi1 libglib2.0-0_2.62.1-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-5 libgomp1_9.2.1-8+rpi1 libgpg-error0_1.36-7 libgraphite2-3_1.3.13-8 libgs9_9.27~dfsg-3.1 libgs9-common_9.27~dfsg-3.1 libgsl-dev_2.5+dfsg-6 libgsl23_2.5+dfsg-6 libgslcblas0_2.5+dfsg-6 libgssapi-krb5-2_1.17-6+b1 libharfbuzz-icu0_2.6.2-1 libharfbuzz0b_2.6.2-1 libhogweed4_3.4.1-1 libice6_2:1.0.9-2 libicu63_63.2-2 libidn11_1.33-2.2 libidn2-0_2.2.0-2 libijs-0.35_0.35-15 libisl19_0.20-2 libisl21_0.21-2 libjbig0_2.1-3.1+b2 libjbig2dec0_0.17-1 libjpeg62-turbo_1:1.5.2-2+b1 libk5crypto3_1.17-6+b1 libkeyutils1_1.6-6 libkpathsea6_2019.20190605.51237-3 libkrb5-3_1.17-6+b1 libkrb5support0_1.17-6+b1 libksba8_1.3.5-2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.48+dfsg-1 libldap-common_2.4.48+dfsg-1 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-5 libmagic1_1:5.37-5 libmath-tamuanova-perl_1.0.2-2+b7 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20190803-1 libncursesw6_6.1+20190803-1 libnetpbm10_2:10.0-15.3+b1 libnettle6_3.4.1-1 libnpth0_1.6-1 libopenjp2-7_2.3.1-1 libp11-kit0_0.23.17-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre2-8-0_10.32-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libperl5.30_5.30.0-6 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.37-1 libptexenc1_2019.20190605.51237-3 libpython-stdlib_2.7.16-1 libpython2-stdlib_2.7.16-1 libpython2.7-minimal_2.7.17~rc1-1 libpython2.7-stdlib_2.7.17~rc1-1 libpython3-stdlib_3.7.5-1 libpython3.7-minimal_3.7.5~rc1-2 libpython3.7-stdlib_3.7.5~rc1-2 libreadline7_7.0-5 libreadline8_8.0-3 libsasl2-2_2.1.27+dfsg-1+b1 libsasl2-modules-db_2.1.27+dfsg-1+b1 libseccomp2_2.4.1-2+rpi1 libselinux1_2.9-2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsqlite3-0_3.29.0-2 libss2_1.45.4-1 libssl1.1_1.1.1d-1 libstdc++-9-dev_9.2.1-8+rpi1 libstdc++6_9.2.1-8+rpi1 libsub-override-perl_0.09-2 libsynctex2_2019.20190605.51237-3 libsystemd0_242-7+rpi1 libtamuanova-0.2_0.2-4+b2 libtasn1-6_4.14-3 libteckit0_2.5.8+ds2-5 libtest-deep-perl_1.128-1 libtexlua53_2019.20190605.51237-3 libtexluajit2_2019.20190605.51237-3 libtiff5_4.0.10+git191003-1 libtinfo5_6.1+20190803-1 libtinfo6_6.1+20190803-1 libtool_2.4.6-11 libubsan1_9.2.1-8+rpi1 libuchardet0_0.0.6-3 libudev1_242-7+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-7+b2 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.3+dfsg-1+rpi1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_4.18.20-2+rpi1+b1 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.7-3 mawk_1.3.3-17 mime-support_3.64 mount_2.34-0.1 ncurses-base_6.1+20190803-1 ncurses-bin_6.1+20190803-1 netbase_5.6 netpbm_2:10.0-15.3+b1 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-6 perl-base_5.30.0-6 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-6 pinentry-curses_1.1.0-3 po-debconf_1.0.21 poppler-data_0.4.9-2 preview-latex-style_11.91-2 python_2.7.16-1 python-minimal_2.7.16-1 python2_2.7.16-1 python2-minimal_2.7.16-1 python2.7_2.7.17~rc1-1 python2.7-minimal_2.7.17~rc1-1 python3_3.7.5-1 python3-minimal_3.7.5-1 python3.7_3.7.5~rc1-2 python3.7-minimal_3.7.5~rc1-2 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-altree-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96~beta-3 t1utils_1.41-3 tar_1.30+dfsg-6 tex-common_6.12 texlive-base_2019.20190930-1 texlive-binaries_2019.20190605.51237-3 texlive-fonts-recommended_2019.20190930-1 texlive-lang-french_2019.20190930-1 texlive-latex-base_2019.20190930-1 texlive-latex-extra_2019.20190930-3 texlive-latex-recommended_2019.20190930-1 texlive-pictures_2019.20190930-1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Jun 7 08:02:13 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./altree_1.3.1-7.dsc
dpkg-source: info: extracting altree in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking altree_1.3.1.orig.tar.gz
dpkg-source: info: unpacking altree_1.3.1-7.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying from-upstream-no-nested-functions.patch
dpkg-source: info: applying no-quicksort.patch
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 1.3.1-7+b2
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-c453b364-2970-4466-9645-5b61aa490288
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package altree
dpkg-buildpackage: info: source version 1.3.1-7+b2
dpkg-buildpackage: info: source distribution bullseye-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C Documentation distclean
make[2]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[2]: Nothing to be done for 'distclean'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
dh_auto_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro"
Checking if your kit is complete...
Looks good
MakeMaker (v7.34)
Warning (non-fatal): Target 'dynamic' depends on targets in skipped section 'dynamic_lib'
Warning (non-fatal): Target 'static' depends on targets in skipped section 'static_lib'
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for altree
Writing MYMETA.yml and MYMETA.json
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C Documentation pdf
make[2]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[3]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[3]: Nothing to be done for 'LU_WATCH_FILES_SAVE'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.pdf <======
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx) Please, consider switching to 'figlatex' package
(texgraphicx) on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps'
(texdepends) Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
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Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: Reference `fig:altree' on page 2 undefined on input line 121.
Package texdepends Warning: No 'fig/overview.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 124.
Package texdepends Warning: Figure 'fig/overview.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 124.
LaTeX Warning: Reference `fig:nesting_algo' on page 2 undefined on input line 143.
Package natbib Warning: Citation `Bardel05' on page 2 undefined on input line 143.
Package natbib Warning: Citation `Ge03' on page 2 undefined on input line 146.
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Package texdepends Warning: No 'fig/altree-q.pdftex' file
(texdepends) using 1 for graphic dimensions on input line 150.
Package texdepends Warning: Figure 'fig/altree-q.pdftex_t' needed
(texdepends) Skipping it this time (the last one however)
(texdepends) on input line 150.
LaTeX Warning: `h' float specifier changed to `ht'.
Package natbib Warning: Citation `Bardel05' on page 4 undefined on input line 180.
Package natbib Warning: Citation `Stephens01' on page 5 undefined on input line 197.
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[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
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[]\T1/pcr/m/n/10.95 phylip \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-
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Package natbib Warning: Citation `Guindon03' on page 7 undefined on input line 288.
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Chapter 3.
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[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
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[]
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Chapter 7.
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Chapter 1.
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Chapter 2.
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Chapter 1.
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Chapter 3.
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[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
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[]
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Chapter 4.
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[]
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\T1/ptm/m/n/10.95 Examples: $[]$ $[]$
Chapter 5.
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[]|\T1/pcr/m/n/10.95 --data-qual|-q
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[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
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[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
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[]|\T1/pcr/m/n/10.95 --s-site-characters
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[]
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\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Chapter 6.
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[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
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[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put
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\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
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[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run
Chapter 7.
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/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[9]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[9]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
/usr/bin/make LU_REC_LEVEL=5 manual.pdf
make[10]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[10]: 'manual.pdf' is up to date.
make[10]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[8]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
dh_auto_build
make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
make -C c_sources
Running Mkbootstrap for CUtils ()
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" chisq.c
chmod 644 "CUtils.bs"
"/usr/bin/perl" "/usr/share/perl/5.30.0/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.30/ExtUtils/typemap' CUtils.xs > CUtils.xsc
cp lib/ALTree/CUtils.pm ../blib/lib/ALTree/CUtils.pm
AutoSplitting ../blib/lib/ALTree/CUtils.pm (../blib/lib/auto/ALTree/CUtils)
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" double_permutation.c
cp ALTree/Sens.pm blib/lib/ALTree/Sens.pm
cp ALTree/Nanova.pm blib/lib/ALTree/Nanova.pm
cp ALTree/to_rewrite.pm blib/lib/ALTree/to_rewrite.pm
cp ALTree/Site.pm blib/lib/ALTree/Site.pm
cp ALTree/Node.pm blib/lib/ALTree/Node.pm
cp ALTree/Import.pm blib/lib/ALTree/Import.pm
cp ALTree/SiteCollection.pm blib/lib/ALTree/SiteCollection.pm
cp ALTree/SitePerTree.pm blib/lib/ALTree/SitePerTree.pm
cp ALTree/Input.pm blib/lib/ALTree/Input.pm
cp ALTree/SitePerForet.pm blib/lib/ALTree/SitePerForet.pm
cp ALTree/Base.pm blib/lib/ALTree/Base.pm
cp ALTree/Tree.pm blib/lib/ALTree/Tree.pm
cp ALTree/SiteSensPerForet.pm blib/lib/ALTree/SiteSensPerForet.pm
cp ALTree/Utils.pm blib/lib/ALTree/Utils.pm
cp ALTree/Chi2.pm blib/lib/ALTree/Chi2.pm
cp ALTree/SiteSens.pm blib/lib/ALTree/SiteSens.pm
cp ALTree/Foret.pm blib/lib/ALTree/Foret.pm
cp ALTree/SiteSensPerTree.pm blib/lib/ALTree/SiteSensPerTree.pm
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" fisher.c
Please specify prototyping behavior for CUtils.xs (see perlxs manual)
mv CUtils.xsc CUtils.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" mt19937ar.c
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" myrand.c
arm-linux-gnueabihf-gcc -c -ggdb3 -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"1.1\" -DXS_VERSION=\"1.1\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" CUtils.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" resampling.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" rhyper.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" stats.c
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE" z.c
z.c:12:13: warning: 'sccsfid' defined but not used [-Wunused-variable]
12 | static char sccsfid[] = "@(#) z.c 5.1 (|stat) 12/26/85";
| ^~~~~~~
ar cr libaltree-cutils.a chisq.o double_permutation.o fisher.o mt19937ar.o myrand.o resampling.o rhyper.o stats.o z.o
: libaltree-cutils.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
In file included from CUtils.xs:5:
ppport.h:237: warning: "PERL_UNUSED_DECL" redefined
237 | # define PERL_UNUSED_DECL
|
In file included from CUtils.xs:2:
/usr/lib/arm-linux-gnueabihf/perl/5.30/CORE/perl.h:328: note: this is the location of the previous definition
328 | # define PERL_UNUSED_DECL __attribute__unused__
|
CUtils.xs: In function 'XS_ALTree__CUtils_RHyper':
CUtils.xs:69:16: warning: implicit declaration of function 'rhyper' [-Wimplicit-function-declaration]
69 | RETVAL=rhyper(n1, n2, k);
| ^~~~~~
rm -f ../blib/arch/auto/ALTree/CUtils/CUtils.so
arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -shared -L/usr/local/lib -fstack-protector-strong CUtils.o -o ../blib/arch/auto/ALTree/CUtils/CUtils.so c_sources/libaltree-cutils.a \
-lm -lpthread -lgsl -lcblas \
chmod 755 ../blib/arch/auto/ALTree/CUtils/CUtils.so
Manifying 1 pod document
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
cp progs/altree blib/script/altree
cp progs/altree-add-S blib/script/altree-add-S
cp progs/altree-convert blib/script/altree-convert
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-convert
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-add-S
Manifying 3 pod documents
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 test TEST_VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
Manifying 1 pod document
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
No tests defined for ALTree::CUtils extension.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, '../blib/lib', '../blib/arch')" t/*.t
t/ALTree-CUtils.t .......
1..1
ok 1 - use ALTree::CUtils;
ok
t/double_permutation.t ..
1..3
ok 1 - use ALTree::CUtils;
ok 2 - undef when bad args
ok 3 - double_permutation
ok
All tests successful.
Files=2, Tests=4, 2 wallclock secs ( 0.17 usr 0.02 sys + 1.20 cusr 0.12 csys = 1.51 CPU)
Result: PASS
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/ALTree.t ..
1..1
ok 1 - use ALTree::Import;
ok
All tests successful.
Files=1, Tests=1, 1 wallclock secs ( 0.14 usr 0.02 sys + 0.96 cusr 0.06 csys = 1.18 CPU)
Result: PASS
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
Manifying 1 pod document
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
Manifying 3 pod documents
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/CUtils/CUtils.so
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/CUtils/autosplit.ix
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Sens.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/CUtils.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Nanova.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/to_rewrite.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Site.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Node.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Import.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteCollection.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SitePerTree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Input.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SitePerForet.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Base.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Tree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteSensPerForet.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Utils.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Chi2.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteSens.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Foret.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteSensPerTree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree-add-S.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree-convert.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man3/ALTree::CUtils.3pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree-convert
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree-add-S
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/altree/usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/CUtils/CUtils.so was not linked against libcblas.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'altree' in '../altree_1.3.1-7+b2_armhf.deb'.
dpkg-deb: building package 'altree-dbgsym' in '../altree-dbgsym_1.3.1-7+b2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../altree_1.3.1-7+b2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-10-14T12:18:18Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
altree_1.3.1-7+b2_armhf.changes:
--------------------------------
Format: 1.8
Date: Thu, 07 Jun 2018 09:52:24 +0200
Source: altree (1.3.1-7)
Binary: altree altree-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 1.3.1-7+b2
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
altree - program to perform phylogeny-based association and localization a
Changes:
altree (1.3.1-7+b2) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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bdfbf43b8ed3ae8e364362c8bcd0cf0ebb5682b7 8531 altree_1.3.1-7+b2_armhf.buildinfo
d6a811f0983c54eea02d3b4eaef489d15e54296b 333504 altree_1.3.1-7+b2_armhf.deb
Checksums-Sha256:
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Files:
394fc86985cbe3d54d8947efb5a3b9ca 306196 debug optional altree-dbgsym_1.3.1-7+b2_armhf.deb
e22326c699d5054fee1d90c6dded2e7c 8531 science optional altree_1.3.1-7+b2_armhf.buildinfo
1c1a8201fda2309295156f325aa76cce 333504 science optional altree_1.3.1-7+b2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
altree-dbgsym_1.3.1-7+b2_armhf.deb
----------------------------------
new Debian package, version 2.0.
size 306196 bytes: control archive=540 bytes.
382 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: altree-dbgsym
Source: altree (1.3.1-7)
Version: 1.3.1-7+b2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 315
Depends: altree (= 1.3.1-7+b2)
Section: debug
Priority: optional
Description: debug symbols for altree
Build-Ids: e81e42f6584d53d608ed8d592ebdcde6b9cbf73e
drwxr-xr-x root/root 0 2018-06-07 07:52 ./
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/debug/.build-id/e8/
-rw-r--r-- root/root 312216 2018-06-07 07:52 ./usr/lib/debug/.build-id/e8/1e42f6584d53d608ed8d592ebdcde6b9cbf73e.debug
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-06-07 07:52 ./usr/share/doc/altree-dbgsym -> altree
altree_1.3.1-7+b2_armhf.deb
---------------------------
new Debian package, version 2.0.
size 333504 bytes: control archive=1712 bytes.
795 bytes, 16 lines control
2871 bytes, 35 lines md5sums
Package: altree
Source: altree (1.3.1-7)
Version: 1.3.1-7+b2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 537
Depends: libatlas3-base, libc6 (>= 2.29), libgsl23 (>= 2.5), perl (>= 5.30.0-6), perlapi-5.30.0, libmath-tamuanova-perl
Suggests: altree-examples
Section: science
Priority: optional
Homepage: https://gitlab.inria.fr/NGS/ALTree
Description: program to perform phylogeny-based association and localization analysis
ALTree was designed to perform association detection and localization of
susceptibility sites using haplotype phylogenetic trees: first, it allows the
detection of an association between a candidate gene and a disease, and second,
it enables to make hypothesis about the susceptibility loci.
drwxr-xr-x root/root 0 2018-06-07 07:52 ./
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/bin/
-rwxr-xr-x root/root 55855 2018-06-07 07:52 ./usr/bin/altree
-rwxr-xr-x root/root 15365 2018-06-07 07:52 ./usr/bin/altree-add-S
-rwxr-xr-x root/root 22801 2018-06-07 07:52 ./usr/bin/altree-convert
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/
-rw-r--r-- root/root 342 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Base.pm
-rw-r--r-- root/root 3081 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/CUtils.pm
-rw-r--r-- root/root 2897 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Chi2.pm
-rw-r--r-- root/root 2817 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Foret.pm
-rw-r--r-- root/root 2026 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Import.pm
-rw-r--r-- root/root 24521 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Input.pm
-rw-r--r-- root/root 2371 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Nanova.pm
-rw-r--r-- root/root 5965 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Node.pm
-rw-r--r-- root/root 1455 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Sens.pm
-rw-r--r-- root/root 1895 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Site.pm
-rw-r--r-- root/root 1044 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteCollection.pm
-rw-r--r-- root/root 3569 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SitePerForet.pm
-rw-r--r-- root/root 876 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SitePerTree.pm
-rw-r--r-- root/root 1287 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteSens.pm
-rw-r--r-- root/root 905 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteSensPerForet.pm
-rw-r--r-- root/root 2781 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/SiteSensPerTree.pm
-rw-r--r-- root/root 4804 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Tree.pm
-rw-r--r-- root/root 1467 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/Utils.pm
-rw-r--r-- root/root 9288 2012-11-03 13:24 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/ALTree/to_rewrite.pm
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/CUtils/
-rw-r--r-- root/root 60920 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/CUtils/CUtils.so
-rw-r--r-- root/root 95 2018-06-07 07:52 ./usr/lib/arm-linux-gnueabihf/perl5/5.30/auto/ALTree/CUtils/autosplit.ix
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc-base/
-rw-r--r-- root/root 513 2018-06-07 07:52 ./usr/share/doc-base/altree
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/doc/altree/
-rw-r--r-- root/root 1441 2012-10-28 20:50 ./usr/share/doc/altree/README
-rw-r--r-- root/root 221 2018-06-07 07:52 ./usr/share/doc/altree/changelog.Debian.armhf.gz
-rw-r--r-- root/root 2921 2018-06-07 07:52 ./usr/share/doc/altree/changelog.Debian.gz
-rw-r--r-- root/root 2385 2012-11-03 14:11 ./usr/share/doc/altree/changelog.gz
-rw-r--r-- root/root 1202 2018-06-07 07:52 ./usr/share/doc/altree/copyright
-rw-r--r-- root/root 266176 2018-06-07 07:52 ./usr/share/doc/altree/manual.pdf
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/man/
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/man/man1/
-rw-r--r-- root/root 1995 2018-06-07 07:52 ./usr/share/man/man1/altree-add-S.1p.gz
-rw-r--r-- root/root 2058 2018-06-07 07:52 ./usr/share/man/man1/altree-convert.1p.gz
-rw-r--r-- root/root 3079 2018-06-07 07:52 ./usr/share/man/man1/altree.1p.gz
drwxr-xr-x root/root 0 2018-06-07 07:52 ./usr/share/man/man3/
-rw-r--r-- root/root 1831 2018-06-07 07:52 ./usr/share/man/man3/ALTree::CUtils.3pm.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 16236
Build-Time: 96
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1965
Job: altree_1.3.1-7
Machine Architecture: armhf
Package: altree
Package-Time: 2112
Source-Version: 1.3.1-7
Space: 16236
Status: successful
Version: 1.3.1-7+b2
--------------------------------------------------------------------------------
Finished at 2019-10-14T12:18:18Z
Build needed 00:35:12, 16236k disc space