altree →
1.3.1-6 →
armhf → 2018-05-23 05:34:29
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| altree 1.3.1-6 (armhf) Wed, 23 May 2018 05:18:49 +0000 |
+==============================================================================+
Package: altree
Version: 1.3.1-6
Source Version: 1.3.1-6
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-983f9e94-ae8c-403a-85f1-41755e8860d6' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.8 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.5 MB]
Fetched 23.3 MB in 14s (1636 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'altree' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/altree.git
Please use:
git clone https://salsa.debian.org/med-team/altree.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 517 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main altree 1.3.1-6 (dsc) [2264 B]
Get:2 http://172.17.0.1/private buster-staging/main altree 1.3.1-6 (tar) [509 kB]
Get:3 http://172.17.0.1/private buster-staging/main altree 1.3.1-6 (diff) [6124 B]
Fetched 517 kB in 1s (766 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/altree-inN52k/altree-1.3.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/altree-inN52k' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ykkq1p/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-ykkq1p/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-ykkq1p/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Packages [431 B]
Fetched 2107 B in 0s (11.5 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 61 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15689 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: bash-completion, debhelper (>= 11~), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl
Filtered Build-Depends: bash-completion, debhelper (>= 11~), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl
dpkg-deb: building package 'sbuild-build-depends-altree-dummy' in '/<<BUILDDIR>>/resolver-ykkq1p/apt_archive/sbuild-build-depends-altree-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-altree-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Sources [597 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ Packages [679 B]
Fetched 2609 B in 0s (14.3 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install altree build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libnss-systemd
libpam-systemd libsasl2-modules openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils cpp-7
debhelper dh-autoreconf dh-strip-nondeterminism fig2dev file
fontconfig-config fonts-dejavu-core fonts-lmodern g++-7 gawk gcc-7
gcc-7-base gettext gettext-base ghostscript groff-base intltool-debian
latex-make libarchive-zip-perl libasan4 libatlas-base-dev libatlas3-base
libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbsd0
libcairo2 libcilkrts5 libcroco3 libcups2 libcupsimage2
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-7-dev
libgfortran4 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev
libgsl23 libgslcblas0 libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b
libice6 libicu57 libijs-0.35 libisl19 libjbig0 libjbig2dec0 libjpeg62-turbo
libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2
libmagic-mgc libmagic1 libmath-tamuanova-perl libncursesw6 libnetpbm10
libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpng12-0
libpotrace0 libptexenc1 libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libsigsegv2 libsm6 libstdc++-7-dev libsynctex2
libtamuanova-0.2 libtest-deep-perl libtexlua52 libtexlua53 libtexluajit2
libtiff5 libtimedate-perl libtinfo6 libtool libubsan0 libx11-6 libx11-data
libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6
libxml2 libxmu6 libxpm4 libxrender1 libxt6 libzzip-0-13 m4 man-db
mime-support netpbm po-debconf poppler-data preview-latex-style python
python-minimal python2.7 python2.7-minimal t1utils tex-common texlive-base
texlive-binaries texlive-fonts-recommended texlive-lang-french
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures ucf x11-common xdg-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-7-locales dh-make dwz xfig gcc-7-doc libstdc++6-7-dbg gawk-doc
libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan4-dbg
liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg
libquadmath0-dbg gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x
groff libatlas-doc liblapack-doc cups-common gsl-ref-psdoc | gsl-doc-pdf
| gsl-doc-info | gsl-ref-html krb5-doc krb5-user liblcms2-utils
libstdc++-7-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
apparmor less www-browser libmail-box-perl poppler-utils
fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic
| fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
python-doc python-tk python2.7-doc binfmt-support perl-tk xpdf-reader
| pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc
python-pygments icc-profiles libfile-which-perl
libspreadsheet-parseexcel-perl texlive-latex-extra-doc
texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
| libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
curl | wget | lynx gsfonts inkscape libcupsfilters1 libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
krb5-locales libgpm2 libltdl-dev libmail-sendmail-perl lmodern tex-gyre tipa
texlive-plain-generic ruby | ruby-interpreter tk libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils
debhelper dh-autoreconf dh-strip-nondeterminism fig2dev file
fontconfig-config fonts-dejavu-core fonts-lmodern gawk gettext gettext-base
ghostscript groff-base intltool-debian latex-make libarchive-zip-perl
libatlas-base-dev libatlas3-base libavahi-client3 libavahi-common-data
libavahi-common3 libblas3 libbsd0 libcairo2 libcroco3 libcups2 libcupsimage2
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran4
libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl23
libgslcblas0 libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6
libicu57 libijs-0.35 libisl19 libjbig0 libjbig2dec0 libjpeg62-turbo
libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2
libmagic-mgc libmagic1 libmath-tamuanova-perl libncursesw6 libnetpbm10
libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpng12-0
libpotrace0 libptexenc1 libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libsigsegv2 libsm6 libsynctex2 libtamuanova-0.2
libtest-deep-perl libtexlua52 libtexlua53 libtexluajit2 libtiff5
libtimedate-perl libtinfo6 libtool libx11-6 libx11-data libxau6 libxaw7
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6
libxpm4 libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support netpbm
po-debconf poppler-data preview-latex-style python python-minimal python2.7
python2.7-minimal sbuild-build-depends-altree-dummy t1utils tex-common
texlive-base texlive-binaries texlive-fonts-recommended texlive-lang-french
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures ucf x11-common xdg-utils
The following packages will be upgraded:
cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libcilkrts5 libgcc-7-dev
libstdc++-7-dev libubsan0
9 upgraded, 129 newly installed, 0 to remove and 52 not upgraded.
Need to get 154 MB/166 MB of archives.
After this operation, 478 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ykkq1p/apt_archive ./ sbuild-build-depends-altree-dummy 0.invalid.0 [960 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf gawk armhf 1:4.1.4+dfsg-1+b1 [506 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-1 [393 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-1 [1077 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15~rc1-1 [41.1 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libtinfo6 armhf 6.1+20180210-3 [307 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libncursesw6 armhf 6.1+20180210-3 [103 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-1 [1841 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-1 [298 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15~rc1-1 [20.5 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15~rc1-1 [155 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.09 [53.2 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libasan4 armhf 7.3.0-19 [301 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libisl19 armhf 0.19-1 [427 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf g++-7 armhf 7.3.0-19 [5593 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf gcc-7 armhf 7.3.0-19 [5488 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf cpp-7 armhf 7.3.0-19 [5139 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libubsan0 armhf 7.3.0-19 [106 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libcilkrts5 armhf 7.3.0-19 [35.2 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libstdc++-7-dev armhf 7.3.0-19 [1506 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libgcc-7-dev armhf 7.3.0-19 [671 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf gcc-7-base armhf 7.3.0-19 [187 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf bash-completion all 1:2.8-1 [207 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-2 [234 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-2 [106 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-2 [64.7 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 17 [16.5 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.041-1 [12.0 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.2.1 [1013 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4 [122 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4 [51.1 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4 [53.7 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.7-5 [284 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.7-5 [128 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.0-5 [280 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.0-5 [325 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-13 [16.7 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.13-6 [52.6 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.9-5 [224 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.22~dfsg-2.1 [5241 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.22~dfsg-2.1 [1809 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf ghostscript armhf 9.22~dfsg-2.1 [95.9 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libnetpbm10 armhf 2:10.0-15.3 [74.4 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libpng12-0 armhf 1.2.54-6 [160 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf netpbm armhf 2:10.0-15.3 [888 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.5-1 [292 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.5-1 [683 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf fig2dev armhf 1:3.2.7a-1 [601 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-3 [4540 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf latex-make all 2.2.3-2 [775 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libatlas3-base armhf 3.10.3-6+rpi1 [2439 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libatlas-base-dev armhf 3.10.3-6+rpi1 [3010 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-1 [103 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.15.10-3 [575 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libgslcblas0 armhf 2.4+dfsg-6 [75.1 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libgsl23 armhf 2.4+dfsg-6 [681 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libgsl-dev armhf 2.4+dfsg-6 [863 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.7.6-1 [799 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 1.7.6-1 [584 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2018.20180416.47457-3 [156 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libtamuanova-0.2 armhf 0.2-4+b2 [7760 B]
Get:84 http://172.17.0.1/private buster-staging/main armhf libmath-tamuanova-perl armhf 1.0.2-2+b4 [12.4 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.14-2 [23.1 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2018.20180416.47457-3 [56.7 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libsynctex2 armhf 2018.20180416.47457-3 [66.2 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libtest-deep-perl all 1.128-1 [48.8 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2018.20180416.47457-3 [86.2 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libtexlua53 armhf 2018.20180416.47457-3 [96.8 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2018.20180416.47457-3 [203 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.1 [51.5 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf preview-latex-style all 11.91-1 [201 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.41-2 [52.0 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2018.20180416.47457-3 [8510 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.2-2 [72.8 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2018.20180505-1 [18.9 MB]
Get:101 http://172.17.0.1/private buster-staging/main armhf texlive-fonts-recommended all 2018.20180505-1 [5292 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf texlive-lang-french all 2018.20180505-1 [25.5 MB]
Get:103 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2018.20180505-1 [983 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf texlive-latex-recommended all 2018.20180505-1 [15.3 MB]
Get:105 http://172.17.0.1/private buster-staging/main armhf texlive-pictures all 2018.20180505-1 [4112 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf texlive-latex-extra all 2018.20180505-1 [11.0 MB]
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Setting up libxcb-shm0:armhf (1.13-1) ...
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Setting up texlive-binaries (2018.20180416.47457-3) ...
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update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up texlive-base (2018.20180505-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
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Processing triggers for libc-bin (2.27-3+rpi1) ...
Processing triggers for tex-common (6.09) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.30-15+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-19 gcc-7_7.3.0-19 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-19 libstdc++6_8-20180414-1+rpi1 linux-libc-dev_4.15.17-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-2+b1 bash-completion_1:2.8-1 binutils_2.30-15+rpi1 binutils-arm-linux-gnueabihf_2.30-15+rpi1 binutils-common_2.30-15+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.4+b1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-19 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 debconf_1.5.66 debhelper_11.2.1 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 e2fsprogs-l10n_1.44.1-2 fakeroot_1.22-2 fdisk_2.31.1-0.5 fig2dev_1:3.2.7a-1 file_1:5.33-2 findutils_4.6.0+git+20171230-2 fontconfig-config_2.13.0-5 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-3 g++_4:7.2.0-1d1 g++-7_7.3.0-19 gawk_1:4.1.4+dfsg-1+b1 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-19 gcc-7-base_7.3.0-19 gcc-8-base_8-20180414-1+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 ghostscript_9.22~dfsg-2.1 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 latex-make_2.2.3-2 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-19 libassuan0_2.5.1-2 libatlas-base-dev_3.10.3-6+rpi1 libatlas3-base_3.10.3-6+rpi1 libatomic1_8-20180414-1+rpi1 libattr1_1:2.4.47-2 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libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-19 libstdc++6_8-20180414-1+rpi1 libsynctex2_2018.20180416.47457-3 libsystemd0_238-4 libtamuanova-0.2_0.2-4+b2 libtasn1-6_4.13-2 libtest-deep-perl_1.128-1 libtexlua52_2018.20180416.47457-3 libtexlua53_2018.20180416.47457-3 libtexluajit2_2018.20180416.47457-3 libtiff5_4.0.9-5 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtinfo6_6.1+20180210-3 libtool_2.4.6-2.1 libubsan0_7.3.0-19 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-render0_1.13-1 libxcb-shm0_1.13-1 libxcb1_1.13-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-6.1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.3.3+dfsg-2+rpi1 libzzip-0-13_0.13.62-3.1 linux-base_4.5 linux-libc-dev_4.15.17-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mime-support_3.60 mount_2.31.1-0.5 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 netbase_5.4 netpbm_2:10.0-15.3 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-2 perl-base_5.26.2-2 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-3 pinentry-curses_1.1.0-1 plymouth_0.9.3-2 po-debconf_1.0.20 poppler-data_0.4.9-2 preview-latex-style_11.91-1 procps_2:3.3.14-1 python_2.7.15~rc1-1 python-minimal_2.7.15~rc1-1 python2.7_2.7.15-1 python2.7-minimal_2.7.15-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-altree-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 t1utils_1.41-2 tar_1.29b-2 tex-common_6.09 texlive-base_2018.20180505-1 texlive-binaries_2018.20180416.47457-3 texlive-fonts-recommended_2018.20180505-1 texlive-lang-french_2018.20180505-1 texlive-latex-base_2018.20180505-1 texlive-latex-extra_2018.20180505-1 texlive-latex-recommended_2018.20180505-1 texlive-pictures_2018.20180505-1 tzdata_2018d-1 ucf_3.0038 udev_238-4 util-linux_2.31.1-0.5 x11-common_1:7.7+19 xdg-utils_1.1.2-2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri May 18 10:59:54 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./altree_1.3.1-6.dsc
dpkg-source: info: extracting altree in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking altree_1.3.1.orig.tar.gz
dpkg-source: info: unpacking altree_1.3.1-6.debian.tar.xz
dpkg-source: info: applying from-upstream-no-nested-functions.patch
dpkg-source: info: applying no-quicksort.patch
Check disk space
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Sufficient free space for build
User Environment
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APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-983f9e94-ae8c-403a-85f1-41755e8860d6
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
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dpkg-buildpackage: info: source package altree
dpkg-buildpackage: info: source version 1.3.1-6
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build altree-1.3.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C Documentation distclean
make[2]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
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dh_auto_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
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perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro"
Checking if your kit is complete...
Looks good
MakeMaker (v7.24)
Warning (non-fatal): Target 'dynamic' depends on targets in skipped section 'dynamic_lib'
Warning (non-fatal): Target 'static' depends on targets in skipped section 'static_lib'
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for altree
Writing MYMETA.yml and MYMETA.json
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C Documentation pdf
make[2]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[3]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[3]: Nothing to be done for 'LU_WATCH_FILES_SAVE'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
======> building manual.pdf <======
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
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Chapter 1.
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[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
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[]\T1/pcr/m/n/10.95 phylip \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-
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Chapter 3.
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Chapter 4.
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Chapter 5.
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[]
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Chapter 6.
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Chapter 7.
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Chapter 1.
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Chapter 2.
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Chapter 1.
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Chapter 1.
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make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[9]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
/usr/bin/make LU_REC_LEVEL=5 manual.pdf
make[10]: Entering directory '/<<PKGBUILDDIR>>/Documentation'
make[10]: 'manual.pdf' is up to date.
make[10]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[8]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Documentation'
dh_auto_build
make -j4 -Oline
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp progs/altree blib/script/altree
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp progs/altree-add-S blib/script/altree-add-S
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp progs/altree-convert blib/script/altree-convert
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cp ALTree/SiteSens.pm blib/lib/ALTree/SiteSens.pm
cp ALTree/Site.pm blib/lib/ALTree/Site.pm
cp ALTree/SiteSensPerForet.pm blib/lib/ALTree/SiteSensPerForet.pm
cp ALTree/Sens.pm blib/lib/ALTree/Sens.pm
cp ALTree/Base.pm blib/lib/ALTree/Base.pm
cp ALTree/Node.pm blib/lib/ALTree/Node.pm
cp ALTree/SiteCollection.pm blib/lib/ALTree/SiteCollection.pm
cp ALTree/SiteSensPerTree.pm blib/lib/ALTree/SiteSensPerTree.pm
cp ALTree/SitePerTree.pm blib/lib/ALTree/SitePerTree.pm
cp ALTree/Utils.pm blib/lib/ALTree/Utils.pm
cp ALTree/Import.pm blib/lib/ALTree/Import.pm
cp ALTree/to_rewrite.pm blib/lib/ALTree/to_rewrite.pm
cp ALTree/Tree.pm blib/lib/ALTree/Tree.pm
cp ALTree/Chi2.pm blib/lib/ALTree/Chi2.pm
cp ALTree/SitePerForet.pm blib/lib/ALTree/SitePerForet.pm
cp ALTree/Nanova.pm blib/lib/ALTree/Nanova.pm
cp ALTree/Foret.pm blib/lib/ALTree/Foret.pm
cp ALTree/Input.pm blib/lib/ALTree/Input.pm
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-convert
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make -C c_sources
make[2]: Entering directory '/<<PKGBUILDDIR>>'
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-add-S
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
cp lib/ALTree/CUtils.pm ../blib/lib/ALTree/CUtils.pm
AutoSplitting ../blib/lib/ALTree/CUtils.pm (../blib/lib/auto/ALTree/CUtils)
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" chisq.c
chisq.c: In function 'pochisq':
chisq.c:81:19: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized]
double a, y, s;
^
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" mt19937ar.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" fisher.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
Running Mkbootstrap for CUtils ()
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" myrand.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
chmod 644 "CUtils.bs"
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" double_permutation.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" z.c
z.c:12:13: warning: 'sccsfid' defined but not used [-Wunused-variable]
static char sccsfid[] = "@(#) z.c 5.1 (|stat) 12/26/85";
^~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" resampling.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" stats.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" rhyper.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" "/usr/share/perl/5.26.2/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.26/ExtUtils/typemap' CUtils.xs > CUtils.xsc
Please specify prototyping behavior for CUtils.xs (see perlxs manual)
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
mv CUtils.xsc CUtils.c
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
ar cr libaltree-cutils.a chisq.o double_permutation.o fisher.o mt19937ar.o myrand.o resampling.o rhyper.o stats.o z.o
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
: libaltree-cutils.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[4]: Nothing to be done for 'all'.
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
arm-linux-gnueabihf-gcc -c -ggdb3 -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"1.1\" -DXS_VERSION=\"1.1\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE" CUtils.c
In file included from CUtils.xs:5:0:
ppport.h:237:0: warning: "PERL_UNUSED_DECL" redefined
# define PERL_UNUSED_DECL
In file included from CUtils.xs:2:0:
/usr/lib/arm-linux-gnueabihf/perl/5.26/CORE/perl.h:323:0: note: this is the location of the previous definition
# define PERL_UNUSED_DECL __attribute__unused__
CUtils.xs: In function 'XS_ALTree__CUtils_RHyper':
CUtils.xs:69:16: warning: implicit declaration of function 'rhyper'; did you mean 'hypot'? [-Wimplicit-function-declaration]
RETVAL=rhyper(n1, n2, k);
^~~~~~
hypot
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
rm -f ../blib/arch/auto/ALTree/CUtils/CUtils.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -shared -L/usr/local/lib -fstack-protector-strong CUtils.o -o ../blib/arch/auto/ALTree/CUtils/CUtils.so c_sources/libaltree-cutils.a \
-lm -lpthread -lgsl -lcblas \
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
chmod 755 ../blib/arch/auto/ALTree/CUtils/CUtils.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
Manifying 1 pod document
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Manifying 3 pod documents
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 -Oline test TEST_VERBOSE=1
make[3]: Nothing to be done for 'all'.
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
Manifying 1 pod document
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Nothing to be done for 'all'.
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[3]: Entering directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
No tests defined for ALTree::CUtils extension.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/CUtils/c_sources'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, '../blib/lib', '../blib/arch')" t/*.t
t/ALTree-CUtils.t .......
1..1
ok 1 - use ALTree::CUtils;
ok
t/double_permutation.t ..
1..3
ok 1 - use ALTree::CUtils;
ok 2 - undef when bad args
ok 3 - double_permutation
ok
All tests successful.
Files=2, Tests=4, 0 wallclock secs ( 0.04 usr 0.02 sys + 0.22 cusr 0.04 csys = 0.32 CPU)
Result: PASS
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/ALTree.t ..
1..1
ok 1 - use ALTree::Import;
ok
All tests successful.
Files=1, Tests=1, 1 wallclock secs ( 0.04 usr 0.00 sys + 0.20 cusr 0.02 csys = 0.26 CPU)
Result: PASS
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 -Oline install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[3]: Nothing to be done for 'all'.
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[2]: Entering directory '/<<PKGBUILDDIR>>/CUtils'
Manifying 1 pod document
make[2]: Leaving directory '/<<PKGBUILDDIR>>/CUtils'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Manifying 3 pod documents
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/CUtils.so
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Import.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Foret.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteCollection.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/to_rewrite.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Input.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Tree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/CUtils.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Chi2.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerForet.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Base.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerTree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Sens.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Node.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerTree.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Utils.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSens.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerForet.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Site.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Nanova.pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/autosplit.ix
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree-add-S.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1/altree-convert.1p
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man3/ALTree::CUtils.3pm
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree-convert
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree
Installing /<<PKGBUILDDIR>>/debian/tmp/usr/bin/altree-add-S
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/altree/usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/CUtils.so was not linked against libcblas.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'altree' in '../altree_1.3.1-6_armhf.deb'.
dpkg-deb: building package 'altree-dbgsym' in '../altree-dbgsym_1.3.1-6_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../altree_1.3.1-6_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build altree-1.3.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-05-23T05:34:26Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
altree_1.3.1-6_armhf.changes:
-----------------------------
Format: 1.8
Date: Fri, 18 May 2018 12:01:00 +0200
Source: altree
Binary: altree altree-examples
Architecture: armhf
Version: 1.3.1-6
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
altree - program to perform phylogeny-based association and localization a
altree-examples - example files for ALTree
Closes: 898989
Changes:
altree (1.3.1-6) unstable; urgency=medium
.
[ Dominic Hargreaves ]
* Remove unused _quicksort sub-pragma, no longer supported in Perl 5.27
Closes: #898989
.
[ Andreas Tille ]
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
* Drop useless get-orig-source target
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Files:
2bb6d9c1dae414a798f5d7d060aed469 288232 debug optional altree-dbgsym_1.3.1-6_armhf.deb
b4440beb1f8db4add3033d5e4b2a6225 7824 science optional altree_1.3.1-6_armhf.buildinfo
9747a2f3df00e65c8df6e7b504921103 333232 science optional altree_1.3.1-6_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
altree-dbgsym_1.3.1-6_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 288232 bytes: control archive=532 bytes.
366 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: altree-dbgsym
Source: altree
Version: 1.3.1-6
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 298
Depends: altree (= 1.3.1-6)
Section: debug
Priority: optional
Description: debug symbols for altree
Build-Ids: 1affcc18f222af4007f93859bd4a41c4b6408e78
drwxr-xr-x root/root 0 2018-05-18 10:01 ./
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/debug/.build-id/1a/
-rw-r--r-- root/root 294592 2018-05-18 10:01 ./usr/lib/debug/.build-id/1a/ffcc18f222af4007f93859bd4a41c4b6408e78.debug
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-05-18 10:01 ./usr/share/doc/altree-dbgsym -> altree
altree_1.3.1-6_armhf.deb
------------------------
new Debian package, version 2.0.
size 333232 bytes: control archive=1672 bytes.
757 bytes, 15 lines control
2790 bytes, 34 lines md5sums
Package: altree
Version: 1.3.1-6
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 535
Depends: libatlas3-base, libc6 (>= 2.4), libgsl23, perl (>= 5.26.2-2), perlapi-5.26.2, libmath-tamuanova-perl
Suggests: altree-examples
Section: science
Priority: optional
Homepage: https://gitlab.inria.fr/NGS/ALTree
Description: program to perform phylogeny-based association and localization analysis
ALTree was designed to perform association detection and localization of
susceptibility sites using haplotype phylogenetic trees: first, it allows the
detection of an association between a candidate gene and a disease, and second,
it enables to make hypothesis about the susceptibility loci.
drwxr-xr-x root/root 0 2018-05-18 10:01 ./
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/bin/
-rwxr-xr-x root/root 55855 2018-05-18 10:01 ./usr/bin/altree
-rwxr-xr-x root/root 15365 2018-05-18 10:01 ./usr/bin/altree-add-S
-rwxr-xr-x root/root 22801 2018-05-18 10:01 ./usr/bin/altree-convert
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/
-rw-r--r-- root/root 342 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Base.pm
-rw-r--r-- root/root 3081 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/CUtils.pm
-rw-r--r-- root/root 2897 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Chi2.pm
-rw-r--r-- root/root 2817 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Foret.pm
-rw-r--r-- root/root 2026 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Import.pm
-rw-r--r-- root/root 24521 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Input.pm
-rw-r--r-- root/root 2371 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Nanova.pm
-rw-r--r-- root/root 5965 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Node.pm
-rw-r--r-- root/root 1455 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Sens.pm
-rw-r--r-- root/root 1895 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Site.pm
-rw-r--r-- root/root 1044 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteCollection.pm
-rw-r--r-- root/root 3569 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerForet.pm
-rw-r--r-- root/root 876 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SitePerTree.pm
-rw-r--r-- root/root 1287 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSens.pm
-rw-r--r-- root/root 905 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerForet.pm
-rw-r--r-- root/root 2781 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/SiteSensPerTree.pm
-rw-r--r-- root/root 4804 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Tree.pm
-rw-r--r-- root/root 1467 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/Utils.pm
-rw-r--r-- root/root 9288 2012-11-03 13:24 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/ALTree/to_rewrite.pm
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/
-rw-r--r-- root/root 60912 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/CUtils.so
-rw-r--r-- root/root 95 2018-05-18 10:01 ./usr/lib/arm-linux-gnueabihf/perl5/5.26/auto/ALTree/CUtils/autosplit.ix
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/doc-base/
-rw-r--r-- root/root 513 2018-05-18 10:01 ./usr/share/doc-base/altree
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/doc/altree/
-rw-r--r-- root/root 1441 2012-10-28 20:50 ./usr/share/doc/altree/README
-rw-r--r-- root/root 2879 2018-05-18 10:01 ./usr/share/doc/altree/changelog.Debian.gz
-rw-r--r-- root/root 2385 2012-11-03 14:11 ./usr/share/doc/altree/changelog.gz
-rw-r--r-- root/root 1202 2018-05-18 10:01 ./usr/share/doc/altree/copyright
-rw-r--r-- root/root 266252 2018-05-18 10:01 ./usr/share/doc/altree/manual.pdf
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/man/
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/man/man1/
-rw-r--r-- root/root 1965 2018-05-18 10:01 ./usr/share/man/man1/altree-add-S.1p.gz
-rw-r--r-- root/root 2029 2018-05-18 10:01 ./usr/share/man/man1/altree-convert.1p.gz
-rw-r--r-- root/root 3046 2018-05-18 10:01 ./usr/share/man/man1/altree.1p.gz
drwxr-xr-x root/root 0 2018-05-18 10:01 ./usr/share/man/man3/
-rw-r--r-- root/root 1802 2018-05-18 10:01 ./usr/share/man/man3/ALTree::CUtils.3pm.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 16524
Build-Time: 27
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 888
Job: altree_1.3.1-6
Machine Architecture: armhf
Package: altree
Package-Time: 937
Source-Version: 1.3.1-6
Space: 16524
Status: successful
Version: 1.3.1-6
--------------------------------------------------------------------------------
Finished at 2018-05-23T05:34:26Z
Build needed 00:15:37, 16524k disk space