Raspbian Package Auto-Building

Build log for altree (1.3.1-4+b1) on armhf

altree1.3.1-4+b1armhf → 2016-01-03 16:59:03

sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-03

╔══════════════════════════════════════════════════════════════════════════════╗
║ altree 1.3.1-4+b1 (armhf)                                  03 Jan 2016 16:38 ║
╚══════════════════════════════════════════════════════════════════════════════╝

Package: altree
Version: 1.3.1-4+b1
Source Version: 1.3.1-4
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/altree-P4y4yD/altree-1.3.1' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/altree-P4y4yD' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-a30e4895-dcaf-424e-9326-086e6d9464c4' with '«CHROOT»'

┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot                                                                │
└──────────────────────────────────────────────────────────────────────────────┘

Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8574 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.6 MB]
Fetched 19.2 MB in 22s (871 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files                                                           │
└──────────────────────────────────────────────────────────────────────────────┘


Check APT
─────────

Checking available source versions...

Download source files with APT
──────────────────────────────

Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'altree' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debian-med/trunk/packages/altree/trunk/
Need to get 517 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main altree 1.3.1-4 (dsc) [2275 B]
Get:2 http://172.17.0.1/private stretch-staging/main altree 1.3.1-4 (tar) [509 kB]
Get:3 http://172.17.0.1/private stretch-staging/main altree 1.3.1-4 (diff) [5876 B]
Fetched 517 kB in 0s (5143 kB/s)
Download complete and in download only mode

Check architectures
───────────────────


Check dependencies
──────────────────

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-rbIxPo/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ Sources [208 B]
Get:5 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ Packages [528 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded.
Need to get 0 B/762 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/«BUILDDIR»/resolver-rbIxPo/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [762 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 12701 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), bash-completion, debhelper (>= 9), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), bash-completion, debhelper (>= 9), latex-make, ghostscript, texlive-lang-french, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, libmath-tamuanova-perl, libgsl-dev, libatlas-base-dev, libtest-deep-perl
dpkg-deb: building package 'sbuild-build-depends-altree-dummy' in '/«BUILDDIR»/resolver-4sJAQi/apt_archive/sbuild-build-depends-altree-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ Sources [410 B]
Get:5 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ Packages [669 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install altree build dependencies (apt-based resolver)                       │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  bash-completion bsdmainutils debhelper dh-strip-nondeterminism file
  fontconfig-config fonts-dejavu-core gawk gettext gettext-base gfortran
  gfortran-5 ghostscript groff-base gsfonts intltool-debian latex-make
  libarchive-zip-perl libatlas-base-dev libatlas-dev libatlas3-base
  libavahi-client3 libavahi-common-data libavahi-common3 libblas-common
  libblas-dev libblas3 libcroco3 libcups2 libcupsfilters1 libcupsimage2
  libexpat1 libffi6 libfile-stripnondeterminism-perl libfontconfig1
  libfreetype6 libgfortran-5-dev libgfortran3 libglib2.0-0 libgnutls-deb0-28
  libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl2 libgssapi-krb5-2
  libharfbuzz-icu0 libharfbuzz0b libhogweed4 libice6 libicu55 libidn11
  libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libmagic1
  libmath-tamuanova-perl libnettle6 libopenjpeg5 libp11-kit0 libpaper-utils
  libpaper1 libpipeline1 libpixman-1-0 libpoppler57 libpotrace0 libptexenc1
  libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libsasl2-2
  libsasl2-modules-db libsigsegv2 libsm6 libsqlite3-0 libssl1.0.2 libsynctex1
  libtamuanova-0.2 libtasn1-6 libtest-deep-perl libtexlua52 libtexluajit2
  libtiff5 libtimedate-perl libtrio2 libunistring0 libx11-6 libx11-data
  libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4
  libxt6 libzzip-0-13 man-db mime-support po-debconf poppler-data
  preview-latex-style python python-minimal python2.7 python2.7-minimal
  t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended
  texlive-lang-french texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures transfig ucf x11-common xdg-utils
Suggested packages:
  wamerican | wordlist whois vacation dh-make gawk-doc gettext-doc autopoint
  libasprintf-dev libgettextpo-dev gfortran-doc gfortran-5-doc
  libgfortran3-dbg ghostscript-x groff libblas-doc liblapack-doc liblapack-dev
  liblapack3 cups-common gnutls-bin gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info
  | gsl-ref-html krb5-doc krb5-user liblcms2-utils less www-browser
  libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho
  fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai
  fonts-arphic-uming fonts-nanum python-doc python-tk python2.7-doc
  binfmt-support perl-tk xpdf-reader | pdf-viewer libfile-which-perl
  libspreadsheet-parseexcel-perl python-pygments texlive-pstricks dot2tex
  libtcltk-ruby prerex xfig gvfs-bin
Recommended packages:
  curl | wget | lynx-cur inkscape libglib2.0-data shared-mime-info
  xdg-user-dirs fonts-droid krb5-locales libsasl2-modules xml-core
  libmail-sendmail-perl lmodern ruby wish tipa tex-gyre
  texlive-fonts-recommended-doc texlive-latex-base-doc texlive-latex-extra-doc
  texlive-latex-recommended-doc prosper texlive-pictures-doc tk ruby
  | ruby-interpreter netpbm libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  bash-completion bsdmainutils debhelper dh-strip-nondeterminism file
  fontconfig-config fonts-dejavu-core gawk gettext gettext-base gfortran
  gfortran-5 ghostscript groff-base gsfonts intltool-debian latex-make
  libarchive-zip-perl libatlas-base-dev libatlas-dev libatlas3-base
  libavahi-client3 libavahi-common-data libavahi-common3 libblas-common
  libblas-dev libblas3 libcroco3 libcups2 libcupsfilters1 libcupsimage2
  libexpat1 libffi6 libfile-stripnondeterminism-perl libfontconfig1
  libfreetype6 libgfortran-5-dev libgfortran3 libglib2.0-0 libgnutls-deb0-28
  libgraphite2-3 libgs9 libgs9-common libgsl-dev libgsl2 libgssapi-krb5-2
  libharfbuzz-icu0 libharfbuzz0b libhogweed4 libice6 libicu55 libidn11
  libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libmagic1
  libmath-tamuanova-perl libnettle6 libopenjpeg5 libp11-kit0 libpaper-utils
  libpaper1 libpipeline1 libpixman-1-0 libpoppler57 libpotrace0 libptexenc1
  libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libsasl2-2
  libsasl2-modules-db libsigsegv2 libsm6 libsqlite3-0 libssl1.0.2 libsynctex1
  libtamuanova-0.2 libtasn1-6 libtest-deep-perl libtexlua52 libtexluajit2
  libtiff5 libtimedate-perl libtrio2 libunistring0 libx11-6 libx11-data
  libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4
  libxt6 libzzip-0-13 man-db mime-support po-debconf poppler-data
  preview-latex-style python python-minimal python2.7 python2.7-minimal
  sbuild-build-depends-altree-dummy t1utils tex-common texlive-base
  texlive-binaries texlive-fonts-recommended texlive-lang-french
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures transfig ucf x11-common xdg-utils
0 upgraded, 131 newly installed, 0 to remove and 1 not upgraded.
Need to get 146 MB/146 MB of archives.
After this operation, 541 MB of additional disk space will be used.
Get:1 file:/«BUILDDIR»/resolver-4sJAQi/apt_archive ./ sbuild-build-depends-altree-dummy 0.invalid.0 [904 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-4 [1084 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-1 [23.9 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf bash-completion all 1:2.1-4.2 [179 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.11-2 [380 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.11-2 [1081 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf python-minimal armhf 2.7.11-1 [40.0 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf mime-support all 3.59 [36.4 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.1.0-7 [59.8 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libsqlite3-0 armhf 3.9.2-1 [404 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2e-1 [883 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.11-2 [1836 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf python2.7 armhf 2.7.11-2 [266 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.11-1 [19.5 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf python armhf 2.7.11-1 [150 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-4 [28.2 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf gawk armhf 1:4.1.3+dfsg-0.1 [509 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libfreetype6 armhf 2.6.1-0.1 [411 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf ucf all 3.0031 [68.9 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf fonts-dejavu-core all 2.35-1 [1064 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf fontconfig-config all 2.11.0-6.3 [273 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libfontconfig1 armhf 2.11.0-6.3 [311 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libjbig0 armhf 2.1-3.1 [27.5 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf liblcms2-2 armhf 2.6-3 [113 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libpaper1 armhf 1.1.24+nmu4 [21.4 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libxdmcp6 armhf 1:1.1.2-1 [25.0 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libxcb1 armhf 1.10-3+b1 [40.6 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libx11-data all 2:1.6.3-1 [128 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libx11-6 armhf 2:1.6.3-1 [678 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libzzip-0-13 armhf 0.13.62-3 [51.3 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf poppler-data all 0.4.7-6 [1469 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libtrio2 armhf 1.16+dfsg1-3 [39.0 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.6-1 [119 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libnettle6 armhf 3.1.1-4 [200 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libhogweed4 armhf 3.1.1-4 [126 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.2-3 [93.3 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6 armhf 4.7-3 [44.4 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libgnutls-deb0-28 armhf 3.3.19-1 [647 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-8 [11.5 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.13.2+dfsg-4+b1 [56.5 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.13.2+dfsg-4+b1 [110 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.13.2+dfsg-4+b1 [261 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.13.2+dfsg-4+b1 [129 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf libidn11 armhf 1.32-3 [110 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.26.dfsg1-14+b1 [65.8 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.26.dfsg1-14+b1 [97.1 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b1 [199 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-6 [7379 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.6-1 [1393 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.18 [248 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.55-1 [97.4 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.014-1 [10.6 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.014-1 [7472 B]
Get:67 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20151225 [830 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 5.3.1-4+rpi1 [154 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf libgfortran-5-dev armhf 5.3.1-4+rpi1 [183 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf gfortran-5 armhf 5.3.1-4+rpi1 [23.7 MB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf gfortran armhf 4:5.3.1-1+rpi1 [1362 B]
Get:72 http://172.17.0.1/private stretch-staging/main armhf libavahi-common-data armhf 0.6.32~rc+dfsg-1 [99.5 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf libavahi-common3 armhf 0.6.32~rc+dfsg-1 [48.1 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf libavahi-client3 armhf 0.6.32~rc+dfsg-1 [50.7 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf libcups2 armhf 2.1.2-1 [266 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo armhf 1:1.4.1-2 [103 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf libtiff5 armhf 4.0.5-1 [200 kB]
Get:78 http://172.17.0.1/private stretch-staging/main armhf libcupsfilters1 armhf 1.4.0-1 [107 kB]
Get:79 http://172.17.0.1/private stretch-staging/main armhf libcupsimage2 armhf 2.1.2-1 [116 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf libijs-0.35 armhf 0.35-11 [16.1 kB]
Get:81 http://172.17.0.1/private stretch-staging/main armhf libjbig2dec0 armhf 0.12+20150918-1 [50.7 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf libgs9-common all 9.16~dfsg-2 [2983 kB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf libgs9 armhf 9.16~dfsg-2 [1699 kB]
Get:84 http://172.17.0.1/private stretch-staging/main armhf gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.2 [3364 kB]
Get:85 http://172.17.0.1/private stretch-staging/main armhf ghostscript armhf 9.16~dfsg-2 [92.2 kB]
Get:86 http://172.17.0.1/private stretch-staging/main armhf tex-common all 6.04 [564 kB]
Get:87 http://172.17.0.1/private stretch-staging/main armhf libxpm4 armhf 1:3.5.11-1+b1 [42.4 kB]
Get:88 http://172.17.0.1/private stretch-staging/main armhf x11-common all 1:7.7+12 [251 kB]
Get:89 http://172.17.0.1/private stretch-staging/main armhf transfig armhf 1:3.2.5.e-4 [603 kB]
Get:90 http://172.17.0.1/private stretch-staging/main armhf latex-make all 2.1.19-2 [804 kB]
Get:91 http://172.17.0.1/private stretch-staging/main armhf libblas-common armhf 1.2.20110419-11 [8490 B]
Get:92 http://172.17.0.1/private stretch-staging/main armhf libatlas3-base armhf 3.10.2-7+rpi1 [1841 kB]
Get:93 http://172.17.0.1/private stretch-staging/main armhf libblas3 armhf 1.2.20110419-11 [118 kB]
Get:94 http://172.17.0.1/private stretch-staging/main armhf libblas-dev armhf 1.2.20110419-11 [113 kB]
Get:95 http://172.17.0.1/private stretch-staging/main armhf libatlas-dev all 3.10.2-7+rpi1 [65.0 kB]
Get:96 http://172.17.0.1/private stretch-staging/main armhf libatlas-base-dev armhf 3.10.2-7+rpi1 [2462 kB]
Get:97 http://172.17.0.1/private stretch-staging/main armhf libgraphite2-3 armhf 1.3.3-1 [61.1 kB]
Get:98 http://172.17.0.1/private stretch-staging/main armhf libgsl2 armhf 2.1+dfsg-2 [697 kB]
Get:99 http://172.17.0.1/private stretch-staging/main armhf libgsl-dev armhf 2.1+dfsg-2 [812 kB]
Get:100 http://172.17.0.1/private stretch-staging/main armhf libharfbuzz0b armhf 1.0.1-1+b1 [501 kB]
Get:101 http://172.17.0.1/private stretch-staging/main armhf libharfbuzz-icu0 armhf 1.0.1-1+b1 [390 kB]
Get:102 http://172.17.0.1/private stretch-staging/main armhf libice6 armhf 2:1.0.9-1+b1 [51.9 kB]
Get:103 http://172.17.0.1/private stretch-staging/main armhf libkpathsea6 armhf 2015.20150524.37493-7+b1 [148 kB]
Get:104 http://172.17.0.1/private stretch-staging/main armhf libtamuanova-0.2 armhf 0.2-4 [7260 B]
Get:105 http://172.17.0.1/private stretch-staging/main armhf libmath-tamuanova-perl armhf 1.0.2-2+b2 [12.4 kB]
Get:106 http://172.17.0.1/private stretch-staging/main armhf libpaper-utils armhf 1.1.24+nmu4 [17.2 kB]
Get:107 http://172.17.0.1/private stretch-staging/main armhf libpixman-1-0 armhf 0.33.4-1 [453 kB]
Get:108 http://172.17.0.1/private stretch-staging/main armhf libopenjpeg5 armhf 1:1.5.2-3.1+b4 [93.0 kB]
Get:109 http://172.17.0.1/private stretch-staging/main armhf libpoppler57 armhf 0.38.0-2 [1117 kB]
Get:110 http://172.17.0.1/private stretch-staging/main armhf libpotrace0 armhf 1.13-2 [22.8 kB]
Get:111 http://172.17.0.1/private stretch-staging/main armhf libptexenc1 armhf 2015.20150524.37493-7+b1 [53.8 kB]
Get:112 http://172.17.0.1/private stretch-staging/main armhf libsm6 armhf 2:1.2.2-1+b1 [31.2 kB]
Get:113 http://172.17.0.1/private stretch-staging/main armhf libsynctex1 armhf 2015.20150524.37493-7+b1 [56.4 kB]
Get:114 http://172.17.0.1/private stretch-staging/main armhf libtest-deep-perl all 1.120-1 [46.4 kB]
Get:115 http://172.17.0.1/private stretch-staging/main armhf libtexlua52 armhf 2015.20150524.37493-7+b1 [84.1 kB]
Get:116 http://172.17.0.1/private stretch-staging/main armhf libtexluajit2 armhf 2015.20150524.37493-7+b1 [186 kB]
Get:117 http://172.17.0.1/private stretch-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:118 http://172.17.0.1/private stretch-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:119 http://172.17.0.1/private stretch-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:120 http://172.17.0.1/private stretch-staging/main armhf libxi6 armhf 2:1.7.5-1 [75.4 kB]
Get:121 http://172.17.0.1/private stretch-staging/main armhf preview-latex-style all 11.87-3+deb8u1 [318 kB]
Get:122 http://172.17.0.1/private stretch-staging/main armhf t1utils armhf 1.38-4 [50.1 kB]
Get:123 http://172.17.0.1/private stretch-staging/main armhf texlive-binaries armhf 2015.20150524.37493-7+b1 [6842 kB]
Get:124 http://172.17.0.1/private stretch-staging/main armhf xdg-utils all 1.1.1-1 [71.1 kB]
Get:125 http://172.17.0.1/private stretch-staging/main armhf texlive-base all 2015.20151225-1 [18.1 MB]
Get:126 http://172.17.0.1/private stretch-staging/main armhf texlive-fonts-recommended all 2015.20151225-1 [5685 kB]
Get:127 http://172.17.0.1/private stretch-staging/main armhf texlive-lang-french all 2015.20151225-1 [16.6 MB]
Get:128 http://172.17.0.1/private stretch-staging/main armhf texlive-latex-base all 2015.20151225-1 [897 kB]
Get:129 http://172.17.0.1/private stretch-staging/main armhf texlive-latex-recommended all 2015.20151225-1 [8436 kB]
Get:130 http://172.17.0.1/private stretch-staging/main armhf texlive-pictures all 2015.20151225-1 [3154 kB]
Get:131 http://172.17.0.1/private stretch-staging/main armhf texlive-latex-extra all 2015.20151225-2 [10.9 MB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 146 MB in 19s (7615 kB/s)
Selecting previously unselected package groff-base.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 12701 files and directories currently installed.)
Preparing to unpack .../groff-base_1.22.3-4_armhf.deb ...
Unpacking groff-base (1.22.3-4) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../bsdmainutils_9.0.6_armhf.deb ...
Unpacking bsdmainutils (9.0.6) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../libpipeline1_1.4.1-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.4.1-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../man-db_2.7.5-1_armhf.deb ...
Unpacking man-db (2.7.5-1) ...
Selecting previously unselected package bash-completion.
Preparing to unpack .../bash-completion_1%3a2.1-4.2_all.deb ...
Unpacking bash-completion (1:2.1-4.2) ...
Selecting previously unselected package libpython2.7-minimal:armhf.
Preparing to unpack .../libpython2.7-minimal_2.7.11-2_armhf.deb ...
Unpacking libpython2.7-minimal:armhf (2.7.11-2) ...
Selecting previously unselected package python2.7-minimal.
Preparing to unpack .../python2.7-minimal_2.7.11-2_armhf.deb ...
Unpacking python2.7-minimal (2.7.11-2) ...
Selecting previously unselected package python-minimal.
Preparing to unpack .../python-minimal_2.7.11-1_armhf.deb ...
Unpacking python-minimal (2.7.11-1) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../mime-support_3.59_all.deb ...
Unpacking mime-support (3.59) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.1.0-7_armhf.deb ...
Unpacking libexpat1:armhf (2.1.0-7) ...
Selecting previously unselected package libffi6:armhf.
Preparing to unpack .../libffi6_3.2.1-4_armhf.deb ...
Unpacking libffi6:armhf (3.2.1-4) ...
Selecting previously unselected package libsqlite3-0:armhf.
Preparing to unpack .../libsqlite3-0_3.9.2-1_armhf.deb ...
Unpacking libsqlite3-0:armhf (3.9.2-1) ...
Selecting previously unselected package libssl1.0.2:armhf.
Preparing to unpack .../libssl1.0.2_1.0.2e-1_armhf.deb ...
Unpacking libssl1.0.2:armhf (1.0.2e-1) ...
Selecting previously unselected package libpython2.7-stdlib:armhf.
Preparing to unpack .../libpython2.7-stdlib_2.7.11-2_armhf.deb ...
Unpacking libpython2.7-stdlib:armhf (2.7.11-2) ...
Selecting previously unselected package python2.7.
Preparing to unpack .../python2.7_2.7.11-2_armhf.deb ...
Unpacking python2.7 (2.7.11-2) ...
Selecting previously unselected package libpython-stdlib:armhf.
Preparing to unpack .../libpython-stdlib_2.7.11-1_armhf.deb ...
Unpacking libpython-stdlib:armhf (2.7.11-1) ...
Processing triggers for libc-bin (2.21-6) ...
Setting up libpython2.7-minimal:armhf (2.7.11-2) ...
Setting up python2.7-minimal (2.7.11-2) ...
Setting up python-minimal (2.7.11-1) ...
Selecting previously unselected package python.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 14643 files and directories currently installed.)
Preparing to unpack .../python_2.7.11-1_armhf.deb ...
Unpacking python (2.7.11-1) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../libsigsegv2_2.10-4_armhf.deb ...
Unpacking libsigsegv2:armhf (2.10-4) ...
Setting up libsigsegv2:armhf (2.10-4) ...
Processing triggers for libc-bin (2.21-6) ...
Selecting previously unselected package gawk.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 14712 files and directories currently installed.)
Preparing to unpack .../gawk_1%3a4.1.3+dfsg-0.1_armhf.deb ...
Unpacking gawk (1:4.1.3+dfsg-0.1) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../libfreetype6_2.6.1-0.1_armhf.deb ...
Unpacking libfreetype6:armhf (2.6.1-0.1) ...
Selecting previously unselected package ucf.
Preparing to unpack .../archives/ucf_3.0031_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0031) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../fonts-dejavu-core_2.35-1_all.deb ...
Unpacking fonts-dejavu-core (2.35-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../fontconfig-config_2.11.0-6.3_all.deb ...
Unpacking fontconfig-config (2.11.0-6.3) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../libfontconfig1_2.11.0-6.3_armhf.deb ...
Unpacking libfontconfig1:armhf (2.11.0-6.3) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../libjbig0_2.1-3.1_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../liblcms2-2_2.6-3_armhf.deb ...
Unpacking liblcms2-2:armhf (2.6-3) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../libpaper1_1.1.24+nmu4_armhf.deb ...
Unpacking libpaper1:armhf (1.1.24+nmu4) ...
Selecting previously unselected package libunistring0:armhf.
Preparing to unpack .../libunistring0_0.9.3-5.2_armhf.deb ...
Unpacking libunistring0:armhf (0.9.3-5.2) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../libxau6_1%3a1.0.8-1_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../libxdmcp6_1%3a1.1.2-1_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-1) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../libxcb1_1.10-3+b1_armhf.deb ...
Unpacking libxcb1:armhf (1.10-3+b1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../libx11-data_2%3a1.6.3-1_all.deb ...
Unpacking libx11-data (2:1.6.3-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../libx11-6_2%3a1.6.3-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.3-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../libxext6_2%3a1.3.3-1_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1) ...
Selecting previously unselected package libzzip-0-13:armhf.
Preparing to unpack .../libzzip-0-13_0.13.62-3_armhf.deb ...
Unpacking libzzip-0-13:armhf (0.13.62-3) ...
Selecting previously unselected package poppler-data.
Preparing to unpack .../poppler-data_0.4.7-6_all.deb ...
Unpacking poppler-data (0.4.7-6) ...
Selecting previously unselected package libtrio2:armhf.
Preparing to unpack .../libtrio2_1.16+dfsg1-3_armhf.deb ...
Unpacking libtrio2:armhf (1.16+dfsg1-3) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../libmagic1_1%3a5.25-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.25-2) ...
Selecting previously unselected package file.
Preparing to unpack .../file_1%3a5.25-2_armhf.deb ...
Unpacking file (1:5.25-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../gettext-base_0.19.6-1_armhf.deb ...
Unpacking gettext-base (0.19.6-1) ...
Selecting previously unselected package libnettle6:armhf.
Preparing to unpack .../libnettle6_3.1.1-4_armhf.deb ...
Unpacking libnettle6:armhf (3.1.1-4) ...
Selecting previously unselected package libhogweed4:armhf.
Preparing to unpack .../libhogweed4_3.1.1-4_armhf.deb ...
Unpacking libhogweed4:armhf (3.1.1-4) ...
Selecting previously unselected package libp11-kit0:armhf.
Preparing to unpack .../libp11-kit0_0.23.2-3_armhf.deb ...
Unpacking libp11-kit0:armhf (0.23.2-3) ...
Selecting previously unselected package libtasn1-6:armhf.
Preparing to unpack .../libtasn1-6_4.7-3_armhf.deb ...
Unpacking libtasn1-6:armhf (4.7-3) ...
Selecting previously unselected package libgnutls-deb0-28:armhf.
Preparing to unpack .../libgnutls-deb0-28_3.3.19-1_armhf.deb ...
Unpacking libgnutls-deb0-28:armhf (3.3.19-1) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../libkeyutils1_1.5.9-8_armhf.deb ...
Unpacking libkeyutils1:armhf (1.5.9-8) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../libkrb5support0_1.13.2+dfsg-4+b1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.13.2+dfsg-4+b1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../libk5crypto3_1.13.2+dfsg-4+b1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.13.2+dfsg-4+b1) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../libkrb5-3_1.13.2+dfsg-4+b1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.13.2+dfsg-4+b1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../libgssapi-krb5-2_1.13.2+dfsg-4+b1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.13.2+dfsg-4+b1) ...
Selecting previously unselected package libidn11:armhf.
Preparing to unpack .../libidn11_1.32-3_armhf.deb ...
Unpacking libidn11:armhf (1.32-3) ...
Selecting previously unselected package libsasl2-modules-db:armhf.
Preparing to unpack .../libsasl2-modules-db_2.1.26.dfsg1-14+b1_armhf.deb ...
Unpacking libsasl2-modules-db:armhf (2.1.26.dfsg1-14+b1) ...
Selecting previously unselected package libsasl2-2:armhf.
Preparing to unpack .../libsasl2-2_2.1.26.dfsg1-14+b1_armhf.deb ...
Unpacking libsasl2-2:armhf (2.1.26.dfsg1-14+b1) ...
Selecting previously unselected package libldap-2.4-2:armhf.
Preparing to unpack .../libldap-2.4-2_2.4.42+dfsg-2+rpi1+b1_armhf.deb ...
Unpacking libldap-2.4-2:armhf (2.4.42+dfsg-2+rpi1+b1) ...
Selecting previously unselected package libicu55:armhf.
Preparing to unpack .../libicu55_55.1-6_armhf.deb ...
Unpacking libicu55:armhf (55.1-6) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../libxml2_2.9.3+dfsg1-1_armhf.deb ...
Unpacking libxml2:armhf (2.9.3+dfsg1-1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../libglib2.0-0_2.46.2-3_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.46.2-3) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../libcroco3_0.6.11-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.11-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../gettext_0.19.6-1_armhf.deb ...
Unpacking gettext (0.19.6-1) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../intltool-debian_0.35.0+20060710.4_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../po-debconf_1.0.18_all.deb ...
Unpacking po-debconf (1.0.18) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../libarchive-zip-perl_1.55-1_all.deb ...
Unpacking libarchive-zip-perl (1.55-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../libfile-stripnondeterminism-perl_0.014-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.014-1) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../dh-strip-nondeterminism_0.014-1_all.deb ...
Unpacking dh-strip-nondeterminism (0.014-1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../debhelper_9.20151225_all.deb ...
Unpacking debhelper (9.20151225) ...
Selecting previously unselected package libgfortran3:armhf.
Preparing to unpack .../libgfortran3_5.3.1-4+rpi1_armhf.deb ...
Unpacking libgfortran3:armhf (5.3.1-4+rpi1) ...
Selecting previously unselected package libgfortran-5-dev:armhf.
Preparing to unpack .../libgfortran-5-dev_5.3.1-4+rpi1_armhf.deb ...
Unpacking libgfortran-5-dev:armhf (5.3.1-4+rpi1) ...
Selecting previously unselected package gfortran-5.
Preparing to unpack .../gfortran-5_5.3.1-4+rpi1_armhf.deb ...
Unpacking gfortran-5 (5.3.1-4+rpi1) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../gfortran_4%3a5.3.1-1+rpi1_armhf.deb ...
Unpacking gfortran (4:5.3.1-1+rpi1) ...
Selecting previously unselected package libavahi-common-data:armhf.
Preparing to unpack .../libavahi-common-data_0.6.32~rc+dfsg-1_armhf.deb ...
Unpacking libavahi-common-data:armhf (0.6.32~rc+dfsg-1) ...
Selecting previously unselected package libavahi-common3:armhf.
Preparing to unpack .../libavahi-common3_0.6.32~rc+dfsg-1_armhf.deb ...
Unpacking libavahi-common3:armhf (0.6.32~rc+dfsg-1) ...
Selecting previously unselected package libavahi-client3:armhf.
Preparing to unpack .../libavahi-client3_0.6.32~rc+dfsg-1_armhf.deb ...
Unpacking libavahi-client3:armhf (0.6.32~rc+dfsg-1) ...
Selecting previously unselected package libcups2:armhf.
Preparing to unpack .../libcups2_2.1.2-1_armhf.deb ...
Unpacking libcups2:armhf (2.1.2-1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../libjpeg62-turbo_1%3a1.4.1-2_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.4.1-2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../libtiff5_4.0.5-1_armhf.deb ...
Unpacking libtiff5:armhf (4.0.5-1) ...
Selecting previously unselected package libcupsfilters1:armhf.
Preparing to unpack .../libcupsfilters1_1.4.0-1_armhf.deb ...
Unpacking libcupsfilters1:armhf (1.4.0-1) ...
Selecting previously unselected package libcupsimage2:armhf.
Preparing to unpack .../libcupsimage2_2.1.2-1_armhf.deb ...
Unpacking libcupsimage2:armhf (2.1.2-1) ...
Selecting previously unselected package libijs-0.35:armhf.
Preparing to unpack .../libijs-0.35_0.35-11_armhf.deb ...
Unpacking libijs-0.35:armhf (0.35-11) ...
Selecting previously unselected package libjbig2dec0.
Preparing to unpack .../libjbig2dec0_0.12+20150918-1_armhf.deb ...
Unpacking libjbig2dec0 (0.12+20150918-1) ...
Selecting previously unselected package libgs9-common.
Preparing to unpack .../libgs9-common_9.16~dfsg-2_all.deb ...
Unpacking libgs9-common (9.16~dfsg-2) ...
Selecting previously unselected package libgs9.
Preparing to unpack .../libgs9_9.16~dfsg-2_armhf.deb ...
Unpacking libgs9 (9.16~dfsg-2) ...
Selecting previously unselected package gsfonts.
Preparing to unpack .../gsfonts_1%3a8.11+urwcyr1.0.7~pre44-4.2_all.deb ...
Unpacking gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2) ...
Selecting previously unselected package ghostscript.
Preparing to unpack .../ghostscript_9.16~dfsg-2_armhf.deb ...
Unpacking ghostscript (9.16~dfsg-2) ...
Selecting previously unselected package tex-common.
Preparing to unpack .../tex-common_6.04_all.deb ...
Unpacking tex-common (6.04) ...
Selecting previously unselected package libxpm4:armhf.
Preparing to unpack .../libxpm4_1%3a3.5.11-1+b1_armhf.deb ...
Unpacking libxpm4:armhf (1:3.5.11-1+b1) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../x11-common_1%3a7.7+12_all.deb ...
Unpacking x11-common (1:7.7+12) ...
Selecting previously unselected package transfig.
Preparing to unpack .../transfig_1%3a3.2.5.e-4_armhf.deb ...
Unpacking transfig (1:3.2.5.e-4) ...
Selecting previously unselected package latex-make.
Preparing to unpack .../latex-make_2.1.19-2_all.deb ...
Unpacking latex-make (2.1.19-2) ...
Selecting previously unselected package libblas-common.
Preparing to unpack .../libblas-common_1.2.20110419-11_armhf.deb ...
Unpacking libblas-common (1.2.20110419-11) ...
Selecting previously unselected package libatlas3-base.
Preparing to unpack .../libatlas3-base_3.10.2-7+rpi1_armhf.deb ...
Unpacking libatlas3-base (3.10.2-7+rpi1) ...
Selecting previously unselected package libblas3.
Preparing to unpack .../libblas3_1.2.20110419-11_armhf.deb ...
Unpacking libblas3 (1.2.20110419-11) ...
Selecting previously unselected package libblas-dev.
Preparing to unpack .../libblas-dev_1.2.20110419-11_armhf.deb ...
Unpacking libblas-dev (1.2.20110419-11) ...
Selecting previously unselected package libatlas-dev.
Preparing to unpack .../libatlas-dev_3.10.2-7+rpi1_all.deb ...
Unpacking libatlas-dev (3.10.2-7+rpi1) ...
Selecting previously unselected package libatlas-base-dev.
Preparing to unpack .../libatlas-base-dev_3.10.2-7+rpi1_armhf.deb ...
Unpacking libatlas-base-dev (3.10.2-7+rpi1) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../libgraphite2-3_1.3.3-1_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.3-1) ...
Selecting previously unselected package libgsl2:armhf.
Preparing to unpack .../libgsl2_2.1+dfsg-2_armhf.deb ...
Unpacking libgsl2:armhf (2.1+dfsg-2) ...
Selecting previously unselected package libgsl-dev.
Preparing to unpack .../libgsl-dev_2.1+dfsg-2_armhf.deb ...
Unpacking libgsl-dev (2.1+dfsg-2) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../libharfbuzz0b_1.0.1-1+b1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (1.0.1-1+b1) ...
Selecting previously unselected package libharfbuzz-icu0:armhf.
Preparing to unpack .../libharfbuzz-icu0_1.0.1-1+b1_armhf.deb ...
Unpacking libharfbuzz-icu0:armhf (1.0.1-1+b1) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../libice6_2%3a1.0.9-1+b1_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-1+b1) ...
Selecting previously unselected package libkpathsea6:armhf.
Preparing to unpack .../libkpathsea6_2015.20150524.37493-7+b1_armhf.deb ...
Unpacking libkpathsea6:armhf (2015.20150524.37493-7+b1) ...
Selecting previously unselected package libtamuanova-0.2.
Preparing to unpack .../libtamuanova-0.2_0.2-4_armhf.deb ...
Unpacking libtamuanova-0.2 (0.2-4) ...
Selecting previously unselected package libmath-tamuanova-perl.
Preparing to unpack .../libmath-tamuanova-perl_1.0.2-2+b2_armhf.deb ...
Unpacking libmath-tamuanova-perl (1.0.2-2+b2) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../libpaper-utils_1.1.24+nmu4_armhf.deb ...
Unpacking libpaper-utils (1.1.24+nmu4) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../libpixman-1-0_0.33.4-1_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.33.4-1) ...
Selecting previously unselected package libopenjpeg5:armhf.
Preparing to unpack .../libopenjpeg5_1%3a1.5.2-3.1+b4_armhf.deb ...
Unpacking libopenjpeg5:armhf (1:1.5.2-3.1+b4) ...
Selecting previously unselected package libpoppler57:armhf.
Preparing to unpack .../libpoppler57_0.38.0-2_armhf.deb ...
Unpacking libpoppler57:armhf (0.38.0-2) ...
Selecting previously unselected package libpotrace0.
Preparing to unpack .../libpotrace0_1.13-2_armhf.deb ...
Unpacking libpotrace0 (1.13-2) ...
Selecting previously unselected package libptexenc1:armhf.
Preparing to unpack .../libptexenc1_2015.20150524.37493-7+b1_armhf.deb ...
Unpacking libptexenc1:armhf (2015.20150524.37493-7+b1) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../libsm6_2%3a1.2.2-1+b1_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.2-1+b1) ...
Selecting previously unselected package libsynctex1:armhf.
Preparing to unpack .../libsynctex1_2015.20150524.37493-7+b1_armhf.deb ...
Unpacking libsynctex1:armhf (2015.20150524.37493-7+b1) ...
Selecting previously unselected package libtest-deep-perl.
Preparing to unpack .../libtest-deep-perl_1.120-1_all.deb ...
Unpacking libtest-deep-perl (1.120-1) ...
Selecting previously unselected package libtexlua52:armhf.
Preparing to unpack .../libtexlua52_2015.20150524.37493-7+b1_armhf.deb ...
Unpacking libtexlua52:armhf (2015.20150524.37493-7+b1) ...
Selecting previously unselected package libtexluajit2:armhf.
Preparing to unpack .../libtexluajit2_2015.20150524.37493-7+b1_armhf.deb ...
Unpacking libtexluajit2:armhf (2015.20150524.37493-7+b1) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../libxt6_1%3a1.1.5-1_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1) ...
Selecting previously unselected package libxmu6:armhf.
Preparing to unpack .../libxmu6_2%3a1.1.2-2_armhf.deb ...
Unpacking libxmu6:armhf (2:1.1.2-2) ...
Selecting previously unselected package libxaw7:armhf.
Preparing to unpack .../libxaw7_2%3a1.0.13-1_armhf.deb ...
Unpacking libxaw7:armhf (2:1.0.13-1) ...
Selecting previously unselected package libxi6:armhf.
Preparing to unpack .../libxi6_2%3a1.7.5-1_armhf.deb ...
Unpacking libxi6:armhf (2:1.7.5-1) ...
Selecting previously unselected package preview-latex-style.
Preparing to unpack .../preview-latex-style_11.87-3+deb8u1_all.deb ...
Unpacking preview-latex-style (11.87-3+deb8u1) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../t1utils_1.38-4_armhf.deb ...
Unpacking t1utils (1.38-4) ...
Selecting previously unselected package texlive-binaries.
Preparing to unpack .../texlive-binaries_2015.20150524.37493-7+b1_armhf.deb ...
Unpacking texlive-binaries (2015.20150524.37493-7+b1) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../xdg-utils_1.1.1-1_all.deb ...
Unpacking xdg-utils (1.1.1-1) ...
Selecting previously unselected package texlive-base.
Preparing to unpack .../texlive-base_2015.20151225-1_all.deb ...
Unpacking texlive-base (2015.20151225-1) ...
Selecting previously unselected package texlive-fonts-recommended.
Preparing to unpack .../texlive-fonts-recommended_2015.20151225-1_all.deb ...
Unpacking texlive-fonts-recommended (2015.20151225-1) ...
Selecting previously unselected package texlive-lang-french.
Preparing to unpack .../texlive-lang-french_2015.20151225-1_all.deb ...
Unpacking texlive-lang-french (2015.20151225-1) ...
Selecting previously unselected package texlive-latex-base.
Preparing to unpack .../texlive-latex-base_2015.20151225-1_all.deb ...
Unpacking texlive-latex-base (2015.20151225-1) ...
Selecting previously unselected package texlive-latex-recommended.
Preparing to unpack .../texlive-latex-recommended_2015.20151225-1_all.deb ...
Unpacking texlive-latex-recommended (2015.20151225-1) ...
Selecting previously unselected package texlive-pictures.
Preparing to unpack .../texlive-pictures_2015.20151225-1_all.deb ...
Unpacking texlive-pictures (2015.20151225-1) ...
Selecting previously unselected package texlive-latex-extra.
Preparing to unpack .../texlive-latex-extra_2015.20151225-2_all.deb ...
Unpacking texlive-latex-extra (2015.20151225-2) ...
Selecting previously unselected package sbuild-build-depends-altree-dummy.
Preparing to unpack .../sbuild-build-depends-altree-dummy.deb ...
Unpacking sbuild-build-depends-altree-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.21-6) ...
Processing triggers for systemd (228-2) ...
Setting up groff-base (1.22.3-4) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-1) ...
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up bash-completion (1:2.1-4.2) ...
Setting up mime-support (3.59) ...
Setting up libexpat1:armhf (2.1.0-7) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up libsqlite3-0:armhf (3.9.2-1) ...
Setting up libssl1.0.2:armhf (1.0.2e-1) ...
Setting up libpython2.7-stdlib:armhf (2.7.11-2) ...
Setting up python2.7 (2.7.11-2) ...
Setting up libpython-stdlib:armhf (2.7.11-1) ...
Setting up python (2.7.11-1) ...
Setting up gawk (1:4.1.3+dfsg-0.1) ...
Setting up libfreetype6:armhf (2.6.1-0.1) ...
Setting up ucf (3.0031) ...
Setting up fonts-dejavu-core (2.35-1) ...
Setting up fontconfig-config (2.11.0-6.3) ...
Setting up libfontconfig1:armhf (2.11.0-6.3) ...
Setting up libjbig0:armhf (2.1-3.1) ...
Setting up liblcms2-2:armhf (2.6-3) ...
Setting up libpaper1:armhf (1.1.24+nmu4) ...

Creating config file /etc/papersize with new version
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-1) ...
Setting up libxcb1:armhf (1.10-3+b1) ...
Setting up libx11-data (2:1.6.3-1) ...
Setting up libx11-6:armhf (2:1.6.3-1) ...
Setting up libxext6:armhf (2:1.3.3-1) ...
Setting up libzzip-0-13:armhf (0.13.62-3) ...
Setting up poppler-data (0.4.7-6) ...
Setting up libtrio2:armhf (1.16+dfsg1-3) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.6-1) ...
Setting up libnettle6:armhf (3.1.1-4) ...
Setting up libhogweed4:armhf (3.1.1-4) ...
Setting up libp11-kit0:armhf (0.23.2-3) ...
Setting up libtasn1-6:armhf (4.7-3) ...
Setting up libgnutls-deb0-28:armhf (3.3.19-1) ...
Setting up libkeyutils1:armhf (1.5.9-8) ...
Setting up libkrb5support0:armhf (1.13.2+dfsg-4+b1) ...
Setting up libk5crypto3:armhf (1.13.2+dfsg-4+b1) ...
Setting up libkrb5-3:armhf (1.13.2+dfsg-4+b1) ...
Setting up libgssapi-krb5-2:armhf (1.13.2+dfsg-4+b1) ...
Setting up libidn11:armhf (1.32-3) ...
Setting up libsasl2-modules-db:armhf (2.1.26.dfsg1-14+b1) ...
Setting up libsasl2-2:armhf (2.1.26.dfsg1-14+b1) ...
Setting up libldap-2.4-2:armhf (2.4.42+dfsg-2+rpi1+b1) ...
Setting up libicu55:armhf (55.1-6) ...
Setting up libxml2:armhf (2.9.3+dfsg1-1) ...
Setting up libglib2.0-0:armhf (2.46.2-3) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up gettext (0.19.6-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.18) ...
Setting up libarchive-zip-perl (1.55-1) ...
Setting up libfile-stripnondeterminism-perl (0.014-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libgfortran3:armhf (5.3.1-4+rpi1) ...
Setting up libgfortran-5-dev:armhf (5.3.1-4+rpi1) ...
Setting up gfortran-5 (5.3.1-4+rpi1) ...
Setting up gfortran (4:5.3.1-1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libavahi-common-data:armhf (0.6.32~rc+dfsg-1) ...
Setting up libavahi-common3:armhf (0.6.32~rc+dfsg-1) ...
Setting up libavahi-client3:armhf (0.6.32~rc+dfsg-1) ...
Setting up libcups2:armhf (2.1.2-1) ...
Setting up libjpeg62-turbo:armhf (1:1.4.1-2) ...
Setting up libtiff5:armhf (4.0.5-1) ...
Setting up libijs-0.35:armhf (0.35-11) ...
Setting up libjbig2dec0 (0.12+20150918-1) ...
Setting up libgs9-common (9.16~dfsg-2) ...
Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2) ...
Setting up tex-common (6.04) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libxpm4:armhf (1:3.5.11-1+b1) ...
Setting up x11-common (1:7.7+12) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up transfig (1:3.2.5.e-4) ...
Setting up libblas-common (1.2.20110419-11) ...
Setting up libatlas3-base (3.10.2-7+rpi1) ...
update-alternatives: using /usr/lib/atlas-base/atlas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
update-alternatives: using /usr/lib/atlas-base/atlas/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up libblas3 (1.2.20110419-11) ...
Setting up libblas-dev (1.2.20110419-11) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libatlas-dev (3.10.2-7+rpi1) ...
Setting up libatlas-base-dev (3.10.2-7+rpi1) ...
update-alternatives: using /usr/lib/atlas-base/atlas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
update-alternatives: using /usr/lib/atlas-base/atlas/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up libgraphite2-3:armhf (1.3.3-1) ...
Setting up libgsl2:armhf (2.1+dfsg-2) ...
Setting up libgsl-dev (2.1+dfsg-2) ...
Setting up libharfbuzz0b:armhf (1.0.1-1+b1) ...
Setting up libharfbuzz-icu0:armhf (1.0.1-1+b1) ...
Setting up libice6:armhf (2:1.0.9-1+b1) ...
Setting up libkpathsea6:armhf (2015.20150524.37493-7+b1) ...
Setting up libtamuanova-0.2 (0.2-4) ...
Setting up libmath-tamuanova-perl (1.0.2-2+b2) ...
Setting up libpaper-utils (1.1.24+nmu4) ...
Setting up libpixman-1-0:armhf (0.33.4-1) ...
Setting up libopenjpeg5:armhf (1:1.5.2-3.1+b4) ...
Setting up libpoppler57:armhf (0.38.0-2) ...
Setting up libpotrace0 (1.13-2) ...
Setting up libptexenc1:armhf (2015.20150524.37493-7+b1) ...
Setting up libsm6:armhf (2:1.2.2-1+b1) ...
Setting up libsynctex1:armhf (2015.20150524.37493-7+b1) ...
Setting up libtest-deep-perl (1.120-1) ...
Setting up libtexlua52:armhf (2015.20150524.37493-7+b1) ...
Setting up libtexluajit2:armhf (2015.20150524.37493-7+b1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libxi6:armhf (2:1.7.5-1) ...
Setting up preview-latex-style (11.87-3+deb8u1) ...
update-language: texlive-base not installed and configured, doing nothing!
Regenerating '/var/lib/texmf/fmtutil.cnf-DEBIAN'... done.
Regenerating '/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST'... done.
update-fmtutil has updated the following file(s):
	/var/lib/texmf/fmtutil.cnf-DEBIAN
	/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST
If you want to activate the changes in the above file(s),
you should run fmtutil-sys or fmtutil.
Setting up t1utils (1.38-4) ...
Setting up xdg-utils (1.1.1-1) ...
Setting up dh-strip-nondeterminism (0.014-1) ...
Setting up debhelper (9.20151225) ...
Setting up libcupsfilters1:armhf (1.4.0-1) ...
Setting up libcupsimage2:armhf (2.1.2-1) ...
Setting up libgs9 (9.16~dfsg-2) ...
Setting up ghostscript (9.16~dfsg-2) ...
Setting up latex-make (2.1.19-2) ...
update-language: texlive-base not installed and configured, doing nothing!
Regenerating '/var/lib/texmf/fmtutil.cnf-DEBIAN'... done.
Regenerating '/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST'... done.
update-fmtutil has updated the following file(s):
	/var/lib/texmf/fmtutil.cnf-DEBIAN
	/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST
If you want to activate the changes in the above file(s),
you should run fmtutil-sys or fmtutil.
Setting up texlive-binaries (2015.20150524.37493-7+b1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Processing triggers for tex-common (6.04) ...
update-language: texlive-base not installed and configured, doing nothing!
texlive-base is not ready, skipping fmtutil-sys --all call
Setting up texlive-base (2015.20151225-1) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Processing triggers for tex-common (6.04) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Setting up texlive-lang-french (2015.20151225-1) ...
Setting up texlive-latex-base (2015.20151225-1) ...
Setting up texlive-fonts-recommended (2015.20151225-1) ...
Processing triggers for tex-common (6.04) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Setting up texlive-latex-recommended (2015.20151225-1) ...
Setting up texlive-pictures (2015.20151225-1) ...
Processing triggers for tex-common (6.04) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-latex-extra (2015.20151225-2) ...
Processing triggers for tex-common (6.04) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up sbuild-build-depends-altree-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.21-6) ...
Processing triggers for systemd (228-2) ...
W: No sandbox user '_apt' on the system, can not drop privileges

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.90.20151209-1 dpkg-dev_1.18.4 g++-5_5.3.1-4+rpi1 gcc-5_5.3.1-4+rpi1 libc6-dev_2.21-6 libstdc++-5-dev_5.3.1-4+rpi1 libstdc++6_5.3.1-4+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.113+nmu3 apt_1.1.5 base-files_9.4+rpi1 base-passwd_3.5.38 bash_4.3-14 bash-completion_1:2.1-4.2 binutils_2.25.90.20151209-1 bsdmainutils_9.0.6 bsdutils_1:2.27.1-1 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-4+rpi1 dash_0.5.7-4 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20151225 debianutils_4.5.1 dh-strip-nondeterminism_0.014-1 diffutils_1:3.3-3 dmsetup_2:1.02.114-1 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-10 fontconfig-config_2.11.0-6.3 fonts-dejavu-core_2.35-1 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-4+rpi1 gawk_1:4.1.3+dfsg-0.1 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-3 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-4+rpi1 gcc-5-base_5.3.1-4+rpi1 gettext_0.19.6-1 gettext-base_0.19.6-1 gfortran_4:5.3.1-1+rpi1 gfortran-5_5.3.1-4+rpi1 ghostscript_9.16~dfsg-2 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-4 gsfonts_1:8.11+urwcyr1.0.7~pre44-4.2 gzip_1.6-4 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-4+rpi1 kmod_21-1 latex-make_2.1.19-2 libacl1_2.2.52-2 libapparmor1_2.10-2+b2 libapt-pkg4.16_1.0.10.2 libapt-pkg5.0_1.1.5 libarchive-zip-perl_1.55-1 libasan2_5.3.1-4+rpi1 libatlas-base-dev_3.10.2-7+rpi1 libatlas-dev_3.10.2-7+rpi1 libatlas3-base_3.10.2-7+rpi1 libatomic1_5.3.1-4+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libavahi-client3_0.6.32~rc+dfsg-1 libavahi-common-data_0.6.32~rc+dfsg-1 libavahi-common3_0.6.32~rc+dfsg-1 libblas-common_1.2.20110419-11 libblas-dev_1.2.20110419-11 libblas3_1.2.20110419-11 libblkid1_2.27.1-1 libbz2-1.0_1.0.6-8 libc-bin_2.21-6 libc-dev-bin_2.21-6 libc6_2.21-6 libc6-dev_2.21-6 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-4+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.6.6-5 libcups2_2.1.2-1 libcupsfilters1_1.4.0-1 libcupsimage2_2.1.2-1 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.201 libdevmapper1.02.1_2:1.02.114-1 libdpkg-perl_1.18.4 libdrm2_2.4.65-3 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.27.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.014-1 libfontconfig1_2.11.0-6.3 libfreetype6_2.6.1-0.1 libgc1c2_1:7.4.2-7.3 libgcc-5-dev_5.3.1-4+rpi1 libgcc1_1:5.3.1-4+rpi1 libgcrypt20_1.6.4-4 libgdbm3_1.8.3-13.1 libgfortran-5-dev_5.3.1-4+rpi1 libgfortran3_5.3.1-4+rpi1 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgnutls-deb0-28_3.3.19-1 libgomp1_5.3.1-4+rpi1 libgpg-error0_1.21-1 libgraphite2-3_1.3.3-1 libgs9_9.16~dfsg-2 libgs9-common_9.16~dfsg-2 libgsl-dev_2.1+dfsg-2 libgsl2_2.1+dfsg-2 libgssapi-krb5-2_1.13.2+dfsg-4+b1 libharfbuzz-icu0_1.0.1-1+b1 libharfbuzz0b_1.0.1-1+b1 libhogweed4_3.1.1-4 libice6_2:1.0.9-1+b1 libicu55_55.1-6 libidn11_1.32-3 libijs-0.35_0.35-11 libisl13_0.14-2 libisl15_0.15-3 libjbig0_2.1-3.1 libjbig2dec0_0.12+20150918-1 libjpeg62-turbo_1:1.4.1-2 libk5crypto3_1.13.2+dfsg-4+b1 libkeyutils1_1.5.9-8 libklibc_2.0.4-4+rpi1 libkmod2_21-1 libkpathsea6_2015.20150524.37493-7+b1 libkrb5-3_1.13.2+dfsg-4+b1 libkrb5support0_1.13.2+dfsg-4+b1 liblcms2-2_2.6-3 libldap-2.4-2_2.4.42+dfsg-2+rpi1+b1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmath-tamuanova-perl_1.0.2-2+b2 libmount1_2.27.1-1 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libnettle6_3.1.1-4 libopenjpeg5_1:1.5.2-3.1+b4 libp11-kit0_0.23.2-3 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpaper-utils_1.1.24+nmu4 libpaper1_1.1.24+nmu4 libpcre3_2:8.35-8 libperl5.22_5.22.1-3 libpipeline1_1.4.1-1 libpixman-1-0_0.33.4-1 libplymouth4_0.9.2-3 libpng12-0_1.2.54-1 libpoppler57_0.38.0-2 libpotrace0_1.13-2 libprocps4_2:3.3.10-2 libptexenc1_2015.20150524.37493-7+b1 libpython-stdlib_2.7.11-1 libpython2.7-minimal_2.7.11-2 libpython2.7-stdlib_2.7.11-2 libreadline6_6.3-8+b3 libsasl2-2_2.1.26.dfsg1-14+b1 libsasl2-modules-db_2.1.26.dfsg1-14+b1 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libsigsegv2_2.10-4 libsm6_2:1.2.2-1+b1 libsmartcols1_2.27.1-1 libsqlite3-0_3.9.2-1 libss2_1.42.13-1 libssl1.0.2_1.0.2e-1 libstdc++-5-dev_5.3.1-4+rpi1 libstdc++6_5.3.1-4+rpi1 libsynctex1_2015.20150524.37493-7+b1 libsystemd0_228-2 libtamuanova-0.2_0.2-4 libtasn1-6_4.7-3 libtest-deep-perl_1.120-1 libtexlua52_2015.20150524.37493-7+b1 libtexluajit2_2015.20150524.37493-7+b1 libtiff5_4.0.5-1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libtrio2_1.16+dfsg1-3 libubsan0_5.3.1-4+rpi1 libudev1_228-2 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1 libx11-6_2:1.6.3-1 libx11-data_2:1.6.3-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb1_1.10-3+b1 libxdmcp6_1:1.1.2-1 libxext6_2:1.3.3-1 libxi6_2:1.7.5-1 libxml2_2.9.3+dfsg1-1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.11-1+b1 libxt6_1:1.1.5-1 libzzip-0-13_0.13.62-3 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.5-1 manpages_3.74-1 mawk_1.3.3-17 mime-support_3.59 mount_2.27.1-1 multiarch-support_2.21-6 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-3 perl-base_5.22.1-3 perl-modules-5.22_5.22.1-3 plymouth_0.9.2-3 po-debconf_1.0.18 poppler-data_0.4.7-6 preview-latex-style_11.87-3+deb8u1 procps_2:3.3.10-2 python_2.7.11-1 python-minimal_2.7.11-1 python2.7_2.7.11-2 python2.7-minimal_2.7.11-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-altree-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-2 systemd-sysv_228-2 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 t1utils_1.38-4 tar_1.28-2.1 tex-common_6.04 texlive-base_2015.20151225-1 texlive-binaries_2015.20150524.37493-7+b1 texlive-fonts-recommended_2015.20151225-1 texlive-lang-french_2015.20151225-1 texlive-latex-base_2015.20151225-1 texlive-latex-extra_2015.20151225-2 texlive-latex-recommended_2015.20151225-1 texlive-pictures_2015.20151225-1 transfig_1:3.2.5.e-4 tzdata_2015g-1 ucf_3.0031 udev_228-2 util-linux_2.27.1-1 x11-common_1:7.7+12 xdg-utils_1.1.1-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Wed Dec  9 22:25:33 2015 UTC using RSA key ID 7EC7B751
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./altree_1.3.1-4.dsc
dpkg-source: info: extracting altree in altree-1.3.1
dpkg-source: info: unpacking altree_1.3.1.orig.tar.gz
dpkg-source: info: unpacking altree_1.3.1-4.debian.tar.xz
dpkg-source: info: applying from-upstream-no-nested-functions.patch

Check disc space
────────────────

Sufficient free space for build

Hack binNMU version
───────────────────

Created changelog entry for binNMU version 1.3.1-4+b1

User Environment
────────────────

DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-a30e4895-dcaf-424e-9326-086e6d9464c4
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package altree
dpkg-buildpackage: source version 1.3.1-4+b1
dpkg-buildpackage: source distribution stretch-staging
 dpkg-source --before-build altree-1.3.1
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean
   dh_testdir
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/«PKGBUILDDIR»'
/usr/bin/make -C Documentation distclean
make[2]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[2]: Nothing to be done for 'distclean'.
make[2]: Leaving directory '/«PKGBUILDDIR»/Documentation'
dh_auto_clean
make[1]: Leaving directory '/«PKGBUILDDIR»'
   dh_clean
 debian/rules build-arch
dh build-arch
   dh_testdir -a
   dh_auto_configure -a
	perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro"
Checking if your kit is complete...
Looks good
MakeMaker (v7.0401)
Warning (non-fatal): Target 'dynamic' depends on targets in skipped section 'dynamic_lib'
Warning (non-fatal): Target 'static' depends on targets in skipped section 'static_lib'
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for ALTree::CUtils
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for altree
Writing MYMETA.yml and MYMETA.json
   debian/rules override_dh_auto_build
make[1]: Entering directory '/«PKGBUILDDIR»'
/usr/bin/make -C Documentation pdf
make[2]: Entering directory '/«PKGBUILDDIR»/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[3]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[3]: Nothing to be done for 'LU_WATCH_FILES_SAVE'.
make[3]: Leaving directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.pdf <======
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx)                Please, consider switching to 'figlatex' package
(texgraphicx)                 on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps' 
(texdepends)                Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: Reference `fig:altree' on page 2 undefined on input line 121.
Package texdepends Warning: No 'fig/overview.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 124.
Package texdepends Warning: Figure 'fig/overview.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 124.
LaTeX Warning: Reference `fig:nesting_algo' on page 2 undefined on input line 143.
Package natbib Warning: Citation `Bardel05' on page 2 undefined on input line 143.
Package natbib Warning: Citation `Ge03' on page 2 undefined on input line 146.
Package natbib Warning: Citation `Becker04' on page 2 undefined on input line 146.
Package texdepends Warning: No 'fig/altree-q.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 150.
Package texdepends Warning: Figure 'fig/altree-q.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 150.
LaTeX Warning: `h' float specifier changed to `ht'.
Package natbib Warning: Citation `Bardel05' on page 4 undefined on input line 180.
Package natbib Warning: Citation `Stephens01' on page 5 undefined on input line 197.
Package natbib Warning: Citation `Stephens03' on page 5 undefined on input line 197.
Package natbib Warning: Citation `Becker04' on page 5 undefined on input line 198.
Package natbib Warning: Citation `Swofford02' on page 5 undefined on input line 199.
Package natbib Warning: Citation `Felsenstein04' on page 5 undefined on input line 200.
Package natbib Warning: Citation `YangPAML' on page 5 undefined on input line 200.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Package natbib Warning: Citation `Swofford02' on page 7 undefined on input line 278.
Package natbib Warning: Citation `Felsenstein04' on page 7 undefined on input line 281.
Underfull \hbox (badness 1142) in paragraph at lines 281--284
[]\T1/pcr/m/n/10.95 phylip \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-
Package natbib Warning: Citation `YangPAML' on page 7 undefined on input line 284.
Package natbib Warning: Citation `Guindon03' on page 7 undefined on input line 288.
Underfull \hbox (badness 2486) in paragraph at lines 284--290
[]\T1/pcr/m/n/10.95 paml \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-ab
Underfull \hbox (badness 10000) in paragraph at lines 314--315

Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 396--397

Underfull \hbox (badness 10000) in paragraph at lines 400--401

Underfull \hbox (badness 10000) in paragraph at lines 416--417

Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
 [] 
LaTeX Warning: Reference `help' on page 13 undefined on input line 564.
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$ 
LaTeX Warning: Reference `description_etiquette' on page 14 undefined on input line 632.
LaTeX Warning: Reference `description_etiquette' on page 14 undefined on input line 633.
Package natbib Warning: Citation `Bardel05' on page 14 undefined on input line 634.
LaTeX Warning: Reference `description_etiquette' on page 15 undefined on input line 649.
LaTeX Warning: Reference `description_etiquette' on page 15 undefined on input line 649.
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
 [] 
LaTeX Warning: Reference `help' on page 16 undefined on input line 701.
Underfull \hbox (badness 10000) in paragraph at lines 735--738

Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Package natbib Warning: Citation `Ge03' on page 19 undefined on input line 830.
Package natbib Warning: Citation `Becker04' on page 19 undefined on input line 830.
LaTeX Warning: Reference `fig:option_b' on page 19 undefined on input line 846.
LaTeX Warning: File `option_b.fig' not found on input line 852.
Package texdepends Warning: No 'fig/option_b_1.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 852.
Package texdepends Warning: Figure 'fig/option_b_1.fig' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 852.
LaTeX Warning: File `option_b.fig' not found on input line 853.
Package texdepends Warning: No 'fig/option_b_2.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 853.
Package texdepends Warning: Figure 'fig/option_b_2.fig' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 853.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 921.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 941.
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Package texdepends Warning: No 'fig/create_file_paup.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1009.
Package texdepends Warning: Figure 'fig/create_file_paup.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1009.
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put 
Package texdepends Warning: No 'fig/create_file_phy.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1043.
Package texdepends Warning: Figure 'fig/create_file_phy.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1043.
Package texdepends Warning: No 'fig/association_paup.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1104.
Package texdepends Warning: Figure 'fig/association_paup.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1104.
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Package texdepends Warning: No 'fig/localisation_paup.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1130.
Package texdepends Warning: Figure 'fig/localisation_paup.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1130.
Package texdepends Warning: No 'fig/association_phylip.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1168.
Package texdepends Warning: Figure 'fig/association_phylip.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1168.
Package natbib Warning: Citation `Guindon03' on page 28 undefined on input line 1181.
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Package texdepends Warning: No 'fig/association_paml.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1217.
Package texdepends Warning: Figure 'fig/association_paml.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1217.
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Package texdepends Warning: No 'fig/localisation_paml.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 1252.
Package texdepends Warning: Figure 'fig/localisation_paml.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 1252.
Chapter 7.
Package texdepends Warning: Figure(s) missing. Check dependencies again.
Package natbib Warning: There were undefined citations.
Package rerunfilecheck Warning: File `manual.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.
LaTeX Warning: There were undefined references.
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[3]: Entering directory '/«PKGBUILDDIR»/Documentation'
LaTeX.mk:787: fig/option_b.subfig.mk: No such file or directory
         ======> building  fig/option_b.subfig.mk <======
make[3]: Leaving directory '/«PKGBUILDDIR»/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[3]: Entering directory '/«PKGBUILDDIR»/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
********************************************
*********** New build needed ***************
********************************************
New manual.aux file
LU_rebuild_latex: new run needed (LaTeX message 'Rerun to get...')
LU_rebuild_texdepends: new depends required
********************************************
/usr/bin/make LU_REC_LEVEL=2 manual.pdf
make[4]: Entering directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.bbl <======
This is BibTeX, Version 0.99d (TeX Live 2015/Debian)
The top-level auxiliary file: manual.aux
The style file: plainnat.bst
Database file #1: stage.bib
Warning--empty year in YangPAML
(There was 1 warning)
         ======> building  fig/overview.pdftex <======
         ======> building  fig/overview.pdftex_t <======
         ======> building  fig/altree-q.pdftex <======
         ======> building  fig/altree-q.pdftex_t <======
         ======> building  fig/option_b_1.fig <======
         ======> building  fig/option_b_2.fig <======
         ======> building  fig/create_file_paup.pdftex <======
         ======> building  fig/create_file_paup.pdftex_t <======
         ======> building  fig/create_file_phy.pdftex <======
         ======> building  fig/create_file_phy.pdftex_t <======
         ======> building  fig/association_paup.pdftex <======
         ======> building  fig/association_paup.pdftex_t <======
         ======> building  fig/localisation_paup.pdftex <======
         ======> building  fig/localisation_paup.pdftex_t <======
         ======> building  fig/association_phylip.pdftex <======
         ======> building  fig/association_phylip.pdftex_t <======
         ======> building  fig/association_paml.pdftex <======
         ======> building  fig/association_paml.pdftex_t <======
         ======> building  fig/localisation_paml.pdftex <======
         ======> building  fig/localisation_paml.pdftex_t <======
Previous compilation failed. Rerun needed
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[5]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[5]: Leaving directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.pdf <======
removed 'manual.pdf_NEED_REBUILD'
removed 'manual.pdf.mk'
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx)                Please, consider switching to 'figlatex' package
(texgraphicx)                 on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps' 
(texdepends)                Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
Package natbib Warning: Citation `Bardel05' on page 3 undefined on input line 143.
Package natbib Warning: Citation `Ge03' on page 3 undefined on input line 146.
Package natbib Warning: Citation `Becker04' on page 3 undefined on input line 146.
LaTeX Warning: `h' float specifier changed to `ht'.
Package natbib Warning: Citation `Bardel05' on page 4 undefined on input line 180.
Package natbib Warning: Citation `Stephens01' on page 4 undefined on input line 197.
Package natbib Warning: Citation `Stephens03' on page 4 undefined on input line 197.
Package natbib Warning: Citation `Becker04' on page 4 undefined on input line 198.
Package natbib Warning: Citation `Swofford02' on page 4 undefined on input line 199.
Package natbib Warning: Citation `Felsenstein04' on page 4 undefined on input line 200.
Package natbib Warning: Citation `YangPAML' on page 4 undefined on input line 200.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Package natbib Warning: Citation `Swofford02' on page 7 undefined on input line 278.
Package natbib Warning: Citation `Felsenstein04' on page 7 undefined on input line 281.
Underfull \hbox (badness 1142) in paragraph at lines 281--284
[]\T1/pcr/m/n/10.95 phylip \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-
Package natbib Warning: Citation `YangPAML' on page 7 undefined on input line 284.
Package natbib Warning: Citation `Guindon03' on page 7 undefined on input line 288.
Underfull \hbox (badness 2486) in paragraph at lines 284--290
[]\T1/pcr/m/n/10.95 paml \T1/ptm/b/n/10.95 ?\T1/ptm/m/n/10.95 : freely avail-ab
Underfull \hbox (badness 10000) in paragraph at lines 314--315

Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 396--397

Underfull \hbox (badness 10000) in paragraph at lines 400--401

Underfull \hbox (badness 10000) in paragraph at lines 416--417

Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
 [] 
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$ 
Package natbib Warning: Citation `Bardel05' on page 14 undefined on input line 634.
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 735--738

Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Package natbib Warning: Citation `Ge03' on page 19 undefined on input line 830.
Package natbib Warning: Citation `Becker04' on page 19 undefined on input line 830.
Package texdepends Warning: No 'fig/option_b_1.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 852.
Package texdepends Warning: Figure 'fig/option_b_1.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 852.
Package texdepends Warning: No 'fig/option_b_2.pdftex' file 
(texdepends)                using 1 for graphic dimensions on input line 853.
Package texdepends Warning: Figure 'fig/option_b_2.pdftex_t' needed
(texdepends)                Skipping it this time (the last one however)
(texdepends)                 on input line 853.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 921.
Package natbib Warning: Citation `Bardel05' on page 21 undefined on input line 941.
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put 
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Package natbib Warning: Citation `Guindon03' on page 26 undefined on input line 1181.
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Chapter 7.
Underfull \hbox (badness 10000) in paragraph at lines 58--61
[]\T1/ptm/m/n/10.95 Z Yang.  Phy-lo-ge-netic anal-y-sis by max-i-mum like-li-ho
Package texdepends Warning: Figure(s) missing. Check dependencies again.
Package natbib Warning: There were undefined citations.
Package natbib Warning: Citation(s) may have changed.
(natbib)                Rerun to get citations correct.
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[5]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[5]: Leaving directory '/«PKGBUILDDIR»/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[5]: Entering directory '/«PKGBUILDDIR»/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
********************************************
*********** New build needed ***************
********************************************
New manual.aux file
LU_rebuild_latex: new run needed (LaTeX message 'Rerun to get...')
LU_rebuild_texdepends: new depends required
********************************************
/usr/bin/make LU_REC_LEVEL=3 manual.pdf
make[6]: Entering directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.bbl <======
This is BibTeX, Version 0.99d (TeX Live 2015/Debian)
The top-level auxiliary file: manual.aux
The style file: plainnat.bst
Database file #1: stage.bib
Warning--empty year in YangPAML
(There was 1 warning)
         ======> building  fig/option_b_1.pdftex <======
         ======> building  fig/option_b_1.pdftex_t <======
         ======> building  fig/option_b_2.pdftex <======
         ======> building  fig/option_b_2.pdftex_t <======
Previous compilation failed. Rerun needed
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[7]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[7]: Leaving directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.pdf <======
removed 'manual.pdf_NEED_REBUILD'
removed 'manual.pdf.mk'
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx)                Please, consider switching to 'figlatex' package
(texgraphicx)                 on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps' 
(texdepends)                Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: `h' float specifier changed to `ht'.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Underfull \hbox (badness 10000) in paragraph at lines 314--315

Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 396--397

Underfull \hbox (badness 10000) in paragraph at lines 400--401

Underfull \hbox (badness 10000) in paragraph at lines 416--417

Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
 [] 
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$ 
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 735--738

Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put 
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Chapter 7.
Underfull \hbox (badness 10000) in paragraph at lines 58--61
[]\T1/ptm/m/n/10.95 Z Yang.  Phy-lo-ge-netic anal-y-sis by max-i-mum like-li-ho
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[7]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[7]: Leaving directory '/«PKGBUILDDIR»/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[7]: Entering directory '/«PKGBUILDDIR»/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
********************************************
*********** New build needed ***************
********************************************
New manual.aux file
LU_rebuild_latex: new run needed (LaTeX message 'Rerun to get...')
********************************************
/usr/bin/make LU_REC_LEVEL=4 manual.pdf
make[8]: Entering directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.bbl <======
This is BibTeX, Version 0.99d (TeX Live 2015/Debian)
The top-level auxiliary file: manual.aux
The style file: plainnat.bst
Database file #1: stage.bib
Warning--empty year in YangPAML
(There was 1 warning)
Previous compilation failed. Rerun needed
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_SAVE
make[9]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[9]: Leaving directory '/«PKGBUILDDIR»/Documentation'
         ======> building  manual.pdf <======
removed 'manual.pdf_NEED_REBUILD'
removed 'manual.pdf.mk'
Running: 'pdflatex' '--interaction' 'errorstopmode' '--jobname' 'manual' '\RequirePackage[extension=.pdf]{texdepends}\input{manual.tex}'
Package thumbpdf Warning: Compressed PDF objects of PDF 1.5 are not supported.
Package thumbpdf Warning: Thumbnail data file `manual.tpt' not found.
Package texgraphicx Warning: 'texgraphicx' is now deprecated
(texgraphicx)                Please, consider switching to 'figlatex' package
(texgraphicx)                 on input line 47.
Package texdepends Warning: graphicspath already redefined. Skipping it. on input line 34.
Package texdepends Warning: Diverting empty macro 'Ginclude@eps' 
(texdepends)                Probably a bug in texdepends.sty.
Package texdepends Warning: Gin@getbase already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Ginclude@pdf already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@eps already redefined. Skipping it. on input line 87.
Package texdepends Warning: Gread@pdf already redefined. Skipping it. on input line 87.
Chapter 1.
LaTeX Warning: `h' float specifier changed to `ht'.
Underfull \hbox (badness 1454) in paragraph at lines 196--201
[]\T1/ptm/m/n/10.95 Currently, \T1/pcr/m/n/10.95 ALTree-convert \T1/ptm/m/n/10.
Chapter 2.
Underfull \hbox (badness 10000) in paragraph at lines 314--315

Chapter 3.
Underfull \hbox (badness 10000) in paragraph at lines 369--369
[]|\T1/ptm/m/n/10.95 Output con-tain-ing the num-ber of
Overfull \hbox (2.0805pt too wide) in paragraph at lines 355--370
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 396--397

Underfull \hbox (badness 10000) in paragraph at lines 400--401

Underfull \hbox (badness 10000) in paragraph at lines 416--417

Underfull \hbox (badness 1112) in paragraph at lines 505--507
[]\T1/ptm/m/n/10.95 Other ex-am-ples may be found in the test di-rec-tory. Thes
Chapter 4.
Overfull \hbox (2.0805pt too wide) in paragraph at lines 537--553
 [] 
Overfull \hbox (8.63097pt too wide) in paragraph at lines 584--605
\T1/ptm/m/n/10.95 Examples: $[]$ $[]$ 
Chapter 5.
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --data-qual|-q
Underfull \hbox (badness 1281) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 remove the out-group se-quence for the
Underfull \hbox (badness 5681) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 ancestral se-quence (only use-ful with
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --tree-building-program|-p
Underfull \hbox (badness 10000) in paragraph at lines 697--697
[]|\T1/pcr/m/n/10.95 --s-site-characters
Underfull \hbox (badness 1565) in paragraph at lines 697--697
[]|\T1/ptm/m/n/10.95 print the tree with the char-ac-ter state
Overfull \hbox (2.0805pt too wide) in paragraph at lines 664--698
 [] 
Underfull \hbox (badness 10000) in paragraph at lines 735--738

Underfull \hbox (badness 1622) in paragraph at lines 747--755
\T1/ptm/m/n/10.95 Example of such files are given in the test di-rec-tory. Thes
Chapter 6.
Underfull \hbox (badness 5519) in paragraph at lines 968--971
[]\T1/ptm/b/n/10.95 create_file \T1/ptm/m/n/10.95 which con-tains files and in-
Underfull \hbox (badness 10000) in paragraph at lines 1024--1026
[]\T1/ptm/m/n/10.95 the two \T1/pcr/m/n/10.95 FamHap \T1/ptm/m/n/10.95 out-put 
Underfull \hbox (badness 10000) in paragraph at lines 1125--1127
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Underfull \hbox (badness 2662) in paragraph at lines 1188--1195
\T1/ptm/m/n/10.95 The files nec-es-sary for the phy-lo-ge-netic re-con-struc-ti
Underfull \hbox (badness 10000) in paragraph at lines 1247--1249
[]\T1/ptm/m/n/10.95 a bash script con-tain-ing the three com-mand lines to run 
Chapter 7.
Underfull \hbox (badness 10000) in paragraph at lines 58--61
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" LU_WATCH_FILES_RESTORE
make[9]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[9]: Leaving directory '/«PKGBUILDDIR»/Documentation'
/usr/bin/make LU_REC_MASTER="manual" LU_REC_FLAVOR="PDF" LU_REC_TARGET="manual.pdf" manual.pdf_NEED_REBUILD
make[9]: Entering directory '/«PKGBUILDDIR»/Documentation'
*** Checking rebuild with rule 'latex'
*** Checking rebuild with rule 'texdepends'
/usr/bin/make LU_REC_LEVEL=5 manual.pdf
make[10]: Entering directory '/«PKGBUILDDIR»/Documentation'
make[10]: 'manual.pdf' is up to date.
make[10]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[9]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[8]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[7]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[6]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[5]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[4]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[3]: Leaving directory '/«PKGBUILDDIR»/Documentation'
make[2]: Leaving directory '/«PKGBUILDDIR»/Documentation'
dh_auto_build
	make -j1
make[2]: Entering directory '/«PKGBUILDDIR»'
cp ALTree/Utils.pm blib/lib/ALTree/Utils.pm
cp ALTree/Nanova.pm blib/lib/ALTree/Nanova.pm
cp ALTree/Input.pm blib/lib/ALTree/Input.pm
cp ALTree/Import.pm blib/lib/ALTree/Import.pm
cp ALTree/Chi2.pm blib/lib/ALTree/Chi2.pm
cp ALTree/Tree.pm blib/lib/ALTree/Tree.pm
cp ALTree/Foret.pm blib/lib/ALTree/Foret.pm
cp ALTree/SiteSensPerForet.pm blib/lib/ALTree/SiteSensPerForet.pm
cp ALTree/Site.pm blib/lib/ALTree/Site.pm
cp ALTree/SiteSens.pm blib/lib/ALTree/SiteSens.pm
cp ALTree/Base.pm blib/lib/ALTree/Base.pm
cp ALTree/SitePerTree.pm blib/lib/ALTree/SitePerTree.pm
cp ALTree/SitePerForet.pm blib/lib/ALTree/SitePerForet.pm
cp ALTree/to_rewrite.pm blib/lib/ALTree/to_rewrite.pm
cp ALTree/SiteSensPerTree.pm blib/lib/ALTree/SiteSensPerTree.pm
cp ALTree/Sens.pm blib/lib/ALTree/Sens.pm
cp ALTree/SiteCollection.pm blib/lib/ALTree/SiteCollection.pm
cp ALTree/Node.pm blib/lib/ALTree/Node.pm
make[3]: Entering directory '/«PKGBUILDDIR»/CUtils'
cp lib/ALTree/CUtils.pm ../blib/lib/ALTree/CUtils.pm
AutoSplitting ../blib/lib/ALTree/CUtils.pm (../blib/lib/auto/ALTree/CUtils)
make -C c_sources 
make[4]: Entering directory '/«PKGBUILDDIR»/CUtils/c_sources'
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   chisq.c
chisq.c: In function 'pochisq':
chisq.c:81:19: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized]
        double  a, y, s;
                   ^
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   double_permutation.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   fisher.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   mt19937ar.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   myrand.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   resampling.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   rhyper.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   stats.c
arm-linux-gnueabihf-gcc -c  -Wall -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   z.c
z.c:12:13: warning: 'sccsfid' defined but not used [-Wunused-variable]
 static char sccsfid[] = "@(#) z.c 5.1 (|stat) 12/26/85";
             ^
ar cr libaltree-cutils.a chisq.o double_permutation.o fisher.o mt19937ar.o myrand.o resampling.o rhyper.o stats.o z.o
: libaltree-cutils.a
make[4]: Leaving directory '/«PKGBUILDDIR»/CUtils/c_sources'
make[4]: Entering directory '/«PKGBUILDDIR»/CUtils/c_sources'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«PKGBUILDDIR»/CUtils/c_sources'
Running Mkbootstrap for ALTree::CUtils ()
chmod 644 "CUtils.bs"
"/usr/bin/perl" "/usr/share/perl/5.22.1/ExtUtils/xsubpp"  -typemap "/usr/share/perl/5.22/ExtUtils/typemap"  CUtils.xs > CUtils.xsc && mv CUtils.xsc CUtils.c
Please specify prototyping behavior for CUtils.xs (see perlxs manual)
arm-linux-gnueabihf-gcc -c  -ggdb3 -I. -Ic_sources -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"1.1\" -DXS_VERSION=\"1.1\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE"   CUtils.c
In file included from CUtils.xs:5:0:
ppport.h:237:0: warning: "PERL_UNUSED_DECL" redefined
 #  define PERL_UNUSED_DECL
 ^
In file included from CUtils.xs:2:0:
/usr/lib/arm-linux-gnueabihf/perl/5.22/CORE/perl.h:313:0: note: this is the location of the previous definition
 #    define PERL_UNUSED_DECL __attribute__unused__
 ^
CUtils.xs: In function 'XS_ALTree__CUtils_RHyper':
CUtils.xs:69:16: warning: implicit declaration of function 'rhyper' [-Wimplicit-function-declaration]
         RETVAL=rhyper(n1, n2, k);
                ^
rm -f ../blib/arch/auto/ALTree/CUtils/CUtils.so
arm-linux-gnueabihf-gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro  -shared -L/usr/local/lib -fstack-protector-strong CUtils.o  -o ../blib/arch/auto/ALTree/CUtils/CUtils.so c_sources/libaltree-cutils.a	\
   -lm -lpthread -lgsl -lcblas  	\
  
chmod 755 ../blib/arch/auto/ALTree/CUtils/CUtils.so
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CUtils.bs ../blib/arch/auto/ALTree/CUtils/CUtils.bs 644
Manifying 1 pod document
make[3]: Leaving directory '/«PKGBUILDDIR»/CUtils'
cp progs/altree-add-S blib/script/altree-add-S
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-add-S
cp progs/altree blib/script/altree
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree
cp progs/altree-convert blib/script/altree-convert
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/altree-convert
Manifying 3 pod documents
make[2]: Leaving directory '/«PKGBUILDDIR»'
make[1]: Leaving directory '/«PKGBUILDDIR»'
   dh_auto_test -a
	make -j1 test TEST_VERBOSE=1
make[1]: Entering directory '/«PKGBUILDDIR»'
make[2]: Entering directory '/«PKGBUILDDIR»/CUtils'
make[3]: Entering directory '/«PKGBUILDDIR»/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/«PKGBUILDDIR»/CUtils/c_sources'
Running Mkbootstrap for ALTree::CUtils ()
chmod 644 "CUtils.bs"
Manifying 1 pod document
make[2]: Leaving directory '/«PKGBUILDDIR»/CUtils'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/ALTree.t .. 
1..1
ok 1 - use ALTree::Import;
ok
All tests successful.
Files=1, Tests=1,  1 wallclock secs ( 0.13 usr  0.04 sys +  0.54 cusr  0.04 csys =  0.75 CPU)
Result: PASS
make[2]: Entering directory '/«PKGBUILDDIR»/CUtils'
make[3]: Entering directory '/«PKGBUILDDIR»/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/«PKGBUILDDIR»/CUtils/c_sources'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, '../blib/lib', '../blib/arch')" t/*.t
t/ALTree-CUtils.t ....... 
1..1
ok 1 - use ALTree::CUtils;
ok
t/double_permutation.t .. 
1..3
ok 1 - use ALTree::CUtils;
ok 2 - undef when bad args
ok 3 - double_permutation
ok
All tests successful.
Files=2, Tests=4,  1 wallclock secs ( 0.14 usr  0.02 sys +  0.50 cusr  0.15 csys =  0.81 CPU)
Result: PASS
make[3]: Entering directory '/«PKGBUILDDIR»/CUtils/c_sources'
No tests defined for ALTree::CUtils extension.
make[3]: Leaving directory '/«PKGBUILDDIR»/CUtils/c_sources'
make[2]: Leaving directory '/«PKGBUILDDIR»/CUtils'
make[1]: Leaving directory '/«PKGBUILDDIR»'
 fakeroot debian/rules binary-arch
dh binary-arch
   dh_testroot -a
   dh_prep -a
   dh_auto_install -a
	make -j1 install DESTDIR=/«PKGBUILDDIR»/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/«PKGBUILDDIR»'
make[2]: Entering directory '/«PKGBUILDDIR»/CUtils'
make[3]: Entering directory '/«PKGBUILDDIR»/CUtils/c_sources'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/«PKGBUILDDIR»/CUtils/c_sources'
Manifying 1 pod document
make[2]: Leaving directory '/«PKGBUILDDIR»/CUtils'
Manifying 3 pod documents
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/CUtils/CUtils.so
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/CUtils/autosplit.ix
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Utils.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Nanova.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Input.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Import.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Chi2.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Tree.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Foret.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteSensPerForet.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Site.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteSens.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Base.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SitePerTree.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SitePerForet.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/to_rewrite.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteSensPerTree.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Sens.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteCollection.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Node.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/CUtils.pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/altree.1p
Installing /«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/altree-add-S.1p
Installing /«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/altree-convert.1p
Installing /«PKGBUILDDIR»/debian/tmp/usr/share/man/man3/ALTree::CUtils.3pm
Installing /«PKGBUILDDIR»/debian/tmp/usr/bin/altree-add-S
Installing /«PKGBUILDDIR»/debian/tmp/usr/bin/altree
Installing /«PKGBUILDDIR»/debian/tmp/usr/bin/altree-convert
make[1]: Leaving directory '/«PKGBUILDDIR»'
   dh_install -a
   dh_installdocs -a
   dh_installchangelogs -a
   dh_installman -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   debian/rules override_dh_compress
make[1]: Entering directory '/«PKGBUILDDIR»'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/«PKGBUILDDIR»'
   dh_fixperms -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/altree/usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/CUtils/CUtils.so was not linked against libcblas.so.3 (it uses none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'altree-dbgsym' in '../altree-dbgsym_1.3.1-4+b1_armhf.deb'.
dpkg-deb: building package 'altree' in '../altree_1.3.1-4+b1_armhf.deb'.
 dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../altree_1.3.1-4+b1_armhf.changes
dpkg-genchanges: warning: package altree-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build altree-1.3.1
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20160103-1656

Finished
────────

I: Built successfully

┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot                                                            │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘


altree_1.3.1-4+b1_armhf.changes:
────────────────────────────────

Format: 1.8
Date: Wed, 09 Dec 2015 22:37:46 +0100
Source: altree (1.3.1-4)
Binary: altree altree-examples
Binary-Only: yes
Architecture: armhf
Version: 1.3.1-4+b1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
 altree     - program to perform phylogeny-based association and localization a
 altree-examples - example files for ALTree
Changes:
 altree (1.3.1-4+b1) stretch-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
 e615375c3ce6e88c2cf8a6b14234a33dcb51f044 268558 altree-dbgsym_1.3.1-4+b1_armhf.deb
 cd23b58c908d412faff125ce7215f831282a1084 334336 altree_1.3.1-4+b1_armhf.deb
Checksums-Sha256:
 da51d8fec7cb0d611fe982690398f62484e096b66a39ce239e519c6f1e11580a 268558 altree-dbgsym_1.3.1-4+b1_armhf.deb
 380246be3c861b51060fce2ea6e34faacb6cd96ea1933c594fcebb718cecd49f 334336 altree_1.3.1-4+b1_armhf.deb
Files:
 a7576538f3c9dacadb91dca8c3744519 268558 debug extra altree-dbgsym_1.3.1-4+b1_armhf.deb
 80394fc1fa4777f72d79d2b50af124e0 334336 science optional altree_1.3.1-4+b1_armhf.deb

┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents                                                             │
└──────────────────────────────────────────────────────────────────────────────┘


altree-dbgsym_1.3.1-4+b1_armhf.deb
──────────────────────────────────

 new debian package, version 2.0.
 size 268558 bytes: control archive=502 bytes.
     432 bytes,    13 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: altree-dbgsym
 Source: altree (1.3.1-4)
 Version: 1.3.1-4+b1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 280
 Depends: altree (= 1.3.1-4+b1)
 Section: debug
 Priority: extra
 Homepage: http://claire.bardel.free.fr/software.html
 Description: Debug symbols for altree
 Auto-Built-Package: debug-symbols
 Build-Ids: dc82c1bcdaf264e4cdebfa806e7766a43d9d7cfb

drwxr-xr-x root/root         0 2016-01-03 16:56 ./
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/debug/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/debug/.build-id/dc/
-rw-r--r-- root/root    275572 2016-01-03 16:56 ./usr/lib/debug/.build-id/dc/82c1bcdaf264e4cdebfa806e7766a43d9d7cfb.debug
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/doc/
lrwxrwxrwx root/root         0 2016-01-03 16:56 ./usr/share/doc/altree-dbgsym -> altree


altree_1.3.1-4+b1_armhf.deb
───────────────────────────

 new debian package, version 2.0.
 size 334336 bytes: control archive=1696 bytes.
     792 bytes,    16 lines      control              
    2871 bytes,    35 lines      md5sums              
 Package: altree
 Source: altree (1.3.1-4)
 Version: 1.3.1-4+b1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 538
 Depends: libatlas3-base, libc6 (>= 2.4), libgsl2, perl (>= 5.22.1-3), perlapi-5.22.1, libmath-tamuanova-perl
 Suggests: altree-examples
 Section: science
 Priority: optional
 Homepage: http://claire.bardel.free.fr/software.html
 Description: program to perform phylogeny-based association and localization analysis
  ALTree was designed to perform association detection and localization of
  susceptibility sites using haplotype phylogenetic trees: first, it allows the
  detection of an association between a candidate gene and a disease, and second,
  it enables to make hypothesis about the susceptibility loci.

drwxr-xr-x root/root         0 2016-01-03 16:56 ./
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/bin/
-rwxr-xr-x root/root     55855 2016-01-03 16:56 ./usr/bin/altree
-rwxr-xr-x root/root     15365 2016-01-03 16:56 ./usr/bin/altree-add-S
-rwxr-xr-x root/root     22801 2016-01-03 16:56 ./usr/bin/altree-convert
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/
-rw-r--r-- root/root       342 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Base.pm
-rw-r--r-- root/root      3081 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/CUtils.pm
-rw-r--r-- root/root      2897 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Chi2.pm
-rw-r--r-- root/root      2817 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Foret.pm
-rw-r--r-- root/root      2026 2013-06-30 21:45 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Import.pm
-rw-r--r-- root/root     24521 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Input.pm
-rw-r--r-- root/root      2371 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Nanova.pm
-rw-r--r-- root/root      5965 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Node.pm
-rw-r--r-- root/root      1455 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Sens.pm
-rw-r--r-- root/root      1895 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Site.pm
-rw-r--r-- root/root      1044 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteCollection.pm
-rw-r--r-- root/root      3592 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SitePerForet.pm
-rw-r--r-- root/root       876 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SitePerTree.pm
-rw-r--r-- root/root      1287 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteSens.pm
-rw-r--r-- root/root       905 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteSensPerForet.pm
-rw-r--r-- root/root      2781 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/SiteSensPerTree.pm
-rw-r--r-- root/root      4804 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Tree.pm
-rw-r--r-- root/root      1467 2012-10-28 20:50 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/Utils.pm
-rw-r--r-- root/root      9288 2012-11-03 13:24 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/ALTree/to_rewrite.pm
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/CUtils/
-rw-r--r-- root/root     60972 2016-01-03 16:56 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/CUtils/CUtils.so
-rw-r--r-- root/root        95 2016-01-03 16:55 ./usr/lib/arm-linux-gnueabihf/perl5/5.22/auto/ALTree/CUtils/autosplit.ix
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/doc-base/
-rw-r--r-- root/root       517 2008-06-21 08:06 ./usr/share/doc-base/altree
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/doc/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/doc/altree/
-rw-r--r-- root/root      1441 2012-10-28 20:50 ./usr/share/doc/altree/README
-rw-r--r-- root/root       221 2016-01-03 16:55 ./usr/share/doc/altree/changelog.Debian.armhf.gz
-rw-r--r-- root/root      2661 2016-01-03 16:55 ./usr/share/doc/altree/changelog.Debian.gz
-rw-r--r-- root/root      2385 2012-11-03 14:11 ./usr/share/doc/altree/changelog.gz
-rw-r--r-- root/root      1363 2012-04-22 06:52 ./usr/share/doc/altree/copyright
-rw-r--r-- root/root    266895 2016-01-03 16:55 ./usr/share/doc/altree/manual.pdf
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/man/
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/man/man1/
-rw-r--r-- root/root      1995 2016-01-03 16:56 ./usr/share/man/man1/altree-add-S.1p.gz
-rw-r--r-- root/root      2059 2016-01-03 16:56 ./usr/share/man/man1/altree-convert.1p.gz
-rw-r--r-- root/root      3080 2016-01-03 16:56 ./usr/share/man/man1/altree.1p.gz
drwxr-xr-x root/root         0 2016-01-03 16:56 ./usr/share/man/man3/
-rw-r--r-- root/root      1832 2016-01-03 16:56 ./usr/share/man/man3/ALTree::CUtils.3pm.gz


┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build                                                                   │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use

┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Build Architecture: armhf
Build-Space: 15832
Build-Time: 102
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 926
Job: altree_1.3.1-4
Machine Architecture: armhf
Package: altree
Package-Time: 1073
Source-Version: 1.3.1-4
Space: 15832
Status: successful
Version: 1.3.1-4+b1
────────────────────────────────────────────────────────────────────────────────
Finished at 20160103-1656
Build needed 00:17:53, 15832k disc space