aevol →
5.0-2 →
armhf → 2018-09-30 04:57:29
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| aevol 5.0-2 (armhf) Sun, 30 Sep 2018 04:41:30 +0000 |
+==============================================================================+
Package: aevol
Version: 5.0-2
Source Version: 5.0-2
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-df02deb1-b3d1-4f77-acd0-8417de2b7d6a' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.1 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.8 MB]
Fetched 23.9 MB in 31s (769 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'aevol' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/aevol.git
Please use:
git clone https://salsa.debian.org/med-team/aevol.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 578 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main aevol 5.0-2 (dsc) [1960 B]
Get:2 http://172.17.0.1/private buster-staging/main aevol 5.0-2 (tar) [570 kB]
Get:3 http://172.17.0.1/private buster-staging/main aevol 5.0-2 (diff) [6136 B]
Fetched 578 kB in 1s (1097 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/aevol-coCuFX/aevol-5.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/aevol-coCuFX' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-FlPHQp/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-FlPHQp/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-FlPHQp/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3102 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 74 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (44.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15733 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), zlib1g-dev, libx11-dev, libboost-dev, libboost-system-dev, libboost-filesystem-dev
Filtered Build-Depends: debhelper (>= 11~), zlib1g-dev, libx11-dev, libboost-dev, libboost-system-dev, libboost-filesystem-dev
dpkg-deb: building package 'sbuild-build-depends-aevol-dummy' in '/<<BUILDDIR>>/resolver-FlPHQp/apt_archive/sbuild-build-depends-aevol-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-aevol-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Sources [519 B]
Get:5 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ Packages [600 B]
Fetched 2452 B in 1s (3290 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install aevol build dependencies (apt-based resolver)
-----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libboost-dev
libboost-filesystem-dev libboost-filesystem1.62-dev
libboost-filesystem1.62.0 libboost-system-dev libboost-system1.62-dev
libboost-system1.62.0 libboost1.62-dev libbsd0 libcroco3 libelf1
libfile-stripnondeterminism-perl libfreetype6 libglib2.0-0 libgraphite2-3
libharfbuzz0b libicu-le-hb0 libicu60 libmagic-mgc libmagic1 libpipeline1
libpthread-stubs0-dev libsigsegv2 libtimedate-perl libtool libx11-6
libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev
libxdmcp6 libxml2 m4 man-db po-debconf x11proto-core-dev x11proto-dev
xorg-sgml-doctools xtrans-dev zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libboost-doc libboost1.62-doc libboost-atomic1.62-dev
libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-graph1.62-dev libboost-graph-parallel1.62-dev
libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev
libboost-math1.62-dev libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-python1.62-dev
libboost-random1.62-dev libboost-regex1.62-dev
libboost-serialization1.62-dev libboost-signals1.62-dev
libboost-test1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev
libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev
libmpfrc++-dev libntl-dev libtool-doc gfortran | fortran95-compiler gcj-jdk
libx11-doc libxcb-doc m4-doc apparmor less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libboost-dev
libboost-filesystem-dev libboost-filesystem1.62-dev
libboost-filesystem1.62.0 libboost-system-dev libboost-system1.62-dev
libboost-system1.62.0 libboost1.62-dev libbsd0 libcroco3 libelf1
libfile-stripnondeterminism-perl libfreetype6 libglib2.0-0 libgraphite2-3
libharfbuzz0b libicu-le-hb0 libicu60 libmagic-mgc libmagic1 libpipeline1
libpthread-stubs0-dev libsigsegv2 libtimedate-perl libtool libx11-6
libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev
libxdmcp6 libxml2 m4 man-db po-debconf sbuild-build-depends-aevol-dummy
x11proto-core-dev x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 59 newly installed, 0 to remove and 74 not upgraded.
Need to get 28.6 MB/29.1 MB of archives.
After this operation, 193 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-FlPHQp/apt_archive ./ sbuild-build-depends-aevol-dummy 0.invalid.0 [880 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-2 [1161 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-7 [117 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-1.1 [771 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-7 [434 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-4 [547 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.042-1 [20.1 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.042-1 [12.1 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.1-2 [1051 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.12-1 [69.1 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.8.8-2+rpi1 [860 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb0 armhf 1.0.3+git161113-5 [12.8 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libicu60 armhf 60.2-6 [7789 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7 [602 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-7 [1218 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.3.5 [981 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libboost1.62-dev armhf 1.62.0+dfsg-10 [7003 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libboost-dev armhf 1.62.0.1+b8 [3918 B]
Get:37 http://172.17.0.1/private buster-staging/main armhf libboost-system1.62.0 armhf 1.62.0+dfsg-10 [32.7 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libboost-filesystem1.62.0 armhf 1.62.0+dfsg-10 [58.0 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libboost-system1.62-dev armhf 1.62.0+dfsg-10 [33.9 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libboost-filesystem1.62-dev armhf 1.62.0+dfsg-10 [62.4 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libboost-filesystem-dev armhf 1.62.0.1+b8 [3732 B]
Get:42 http://172.17.0.1/private buster-staging/main armhf libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:43 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13-3 [132 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.6-1 [298 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.6-1 [688 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf x11proto-dev all 2018.4-4 [251 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf x11proto-core-dev all 2018.4-4 [3128 B]
Get:49 http://172.17.0.1/private buster-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libxcb1-dev armhf 1.13-3 [168 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libx11-dev armhf 2:1.6.6-1 [760 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
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Setting up libarchive-zip-perl (1.64-1) ...
Setting up libboost1.62-dev:armhf (1.62.0+dfsg-10) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libpthread-stubs0-dev:armhf (0.3-4) ...
Setting up libelf1:armhf (0.170-0.5) ...
Setting up groff-base (1.22.3-10) ...
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No schema files found: removed existing output file.
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up gettext-base (0.19.8.1-7) ...
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Setting up m4 (1.4.18-1) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up x11proto-dev (2018.4-4) ...
Setting up libfreetype6:armhf (2.8.1-2) ...
Setting up libmagic-mgc (1:5.34-2) ...
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Setting up libgraphite2-3:armhf (1.3.12-1) ...
Setting up xtrans-dev (1.3.5-1) ...
Processing triggers for libc-bin (2.27-5+rpi1) ...
Setting up dwz (0.12-2) ...
Setting up autotools-dev (20180224.1) ...
Setting up libboost-dev:armhf (1.62.0.1+b8) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libx11-data (2:1.6.6-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-7) ...
Setting up libboost-system1.62.0:armhf (1.62.0+dfsg-10) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (0.042-1) ...
Setting up x11proto-core-dev (2018.4-4) ...
Setting up libharfbuzz0b:armhf (1.8.8-2+rpi1) ...
Setting up libxau-dev:armhf (1:1.0.8-1+b2) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.34-2) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libboost-system1.62-dev:armhf (1.62.0+dfsg-10) ...
Setting up libboost-filesystem1.62.0:armhf (1.62.0+dfsg-10) ...
Setting up automake (1:1.16.1-1.1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.8.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxcb1:armhf (1.13-3) ...
Setting up libtool (2.4.6-4) ...
Setting up libboost-filesystem1.62-dev:armhf (1.62.0+dfsg-10) ...
Setting up libboost-system-dev:armhf (1.62.0.1+b8) ...
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Setting up libboost-filesystem-dev:armhf (1.62.0.1+b8) ...
Setting up libxcb1-dev:armhf (1.13-3) ...
Setting up libx11-dev:armhf (2:1.6.6-1) ...
Setting up libicu-le-hb0:armhf (1.0.3+git161113-5) ...
Setting up libicu60:armhf (60.2-6) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up gettext (0.19.8.1-7) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.20) ...
Setting up debhelper (11.3.5) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (0.042-1) ...
Setting up sbuild-build-depends-aevol-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-2+rpi1 dpkg-dev_1.19.0.5 g++-8_8.1.0-12+rpi1 gcc-8_8.1.0-12+rpi1 libc6-dev_2.27-5+rpi1 libstdc++-8-dev_8.1.0-12+rpi1 libstdc++6_8.1.0-12+rpi1 linux-libc-dev_4.16.16-2+rpi1
Package versions: adduser_3.117 apt_1.6.3 autoconf_2.69-11 automake_1:1.16.1-1.1 autopoint_0.19.8.1-7 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-2+rpi1 binutils-arm-linux-gnueabihf_2.31.1-2+rpi1 binutils-common_2.31.1-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:8.1.0-1+rpi1 cpp-8_8.1.0-12+rpi1 dash_0.5.8-2.10 dbus_1.12.10-1 dbus-user-session_1.12.10-1 debconf_1.5.69 debhelper_11.3.5 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dirmngr_2.2.9-1+rpi1 dmsetup_2:1.02.145-4.1+b4 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 dwz_0.12-2 e2fslibs_1.44.3-1 e2fsprogs_1.44.3-1 e2fsprogs-l10n_1.44.3-1 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20171230-2 g++_4:8.1.0-1+rpi1 g++-8_8.1.0-12+rpi1 gcc_4:8.1.0-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.1.0-12+rpi1 gcc-8-base_8.1.0-12+rpi1 gettext_0.19.8.1-7 gettext-base_0.19.8.1-7 gnupg_2.2.9-1+rpi1 gnupg-agent_2.2.9-1+rpi1 gnupg-l10n_2.2.9-1+rpi1 gnupg-utils_2.2.9-1+rpi1 gpg_2.2.9-1+rpi1 gpg-agent_2.2.9-1+rpi1 gpg-wks-client_2.2.9-1+rpi1 gpg-wks-server_2.2.9-1+rpi1 gpgconf_2.2.9-1+rpi1 gpgsm_2.2.9-1+rpi1 gpgv_2.2.9-1+rpi1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.9-2 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.13-8 libapt-pkg5.0_1.6.3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.1.0-12+rpi1 libassuan0_2.5.1-2 libatomic1_8.1.0-12+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.31.1-2+rpi1 libblkid1_2.32.1-0.1 libboost-dev_1.62.0.1+b8 libboost-filesystem-dev_1.62.0.1+b8 libboost-filesystem1.62-dev_1.62.0+dfsg-10 libboost-filesystem1.62.0_1.62.0+dfsg-10 libboost-system-dev_1.62.0.1+b8 libboost-system1.62-dev_1.62.0+dfsg-10 libboost-system1.62.0_1.62.0+dfsg-10 libboost1.62-dev_1.62.0+dfsg-10 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-5+rpi1 libc-dev-bin_2.27-5+rpi1 libc6_2.27-5+rpi1 libc6-dev_2.27-5+rpi1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-12+rpi1 libcom-err2_1.44.3-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.10-1 libdebconfclient0_0.244 libdevmapper1.02.1_2:1.02.145-4.1+b4 libdpkg-perl_1.19.0.5 libdrm-common_2.4.92-1+rpi1 libdrm2_2.4.92-1+rpi1 libelf1_0.170-0.5 libexpat1_2.2.5-3 libext2fs2_1.44.3-1 libfakeroot_1.23-1 libfdisk1_2.32.1-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.042-1 libfreetype6_2.8.1-2 libgcc-8-dev_8.1.0-12+rpi1 libgcc1_1:8.1.0-12+rpi1 libgcrypt20_1.8.3-1 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libglib2.0-0_2.58.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.19-1 libgomp1_8.1.0-12+rpi1 libgpg-error0_1.32-1 libgraphite2-3_1.3.12-1 libharfbuzz0b_1.8.8-2+rpi1 libhogweed4_3.4-1 libicu-le-hb0_1.0.3+git161113-5 libicu60_60.2-6 libidn11_1.33-2.2 libidn2-0_2.0.4-2.2 libip4tc0_1.6.2-1.1 libisl19_0.20-1 libjson-c3_0.12.1-1.3 libklibc_2.0.4-14+rpi1 libkmod2_25-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.46+dfsg-5+rpi1 libldap-common_2.4.46+dfsg-5+rpi1 liblocale-gettext-perl_1.07-3+b2 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180714-1 libncurses6_6.1+20180714-1 libncursesw5_6.1+20180714-1 libncursesw6_6.1+20180714-1 libnettle6_3.4-1 libnpth0_1.6-1 libnss-systemd_239-7 libp11-kit0_0.23.12-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_239-7 libpam0g_1.1.8-3.7 libpcre3_2:8.39-10 libperl5.24_5.24.1-4 libperl5.26_5.26.2-7 libpipeline1_1.5.0-1 libplymouth4_0.9.3-3 libpng16-16_1.6.34-2+rpi1 libprocps7_2:3.3.15-2 libpthread-stubs0-dev_0.3-4 libreadline7_7.0-5 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.32.1-0.1 libsqlite3-0_3.24.0-1 libss2_1.44.3-1 libssl1.1_1.1.0h-4 libstdc++-8-dev_8.1.0-12+rpi1 libstdc++6_8.1.0-12+rpi1 libsystemd0_239-7 libtasn1-6_4.13-3 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180714-1 libtinfo6_6.1+20180714-1 libtool_2.4.6-4 libubsan1_8.1.0-12+rpi1 libudev1_239-7 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32.1-0.1 libx11-6_2:1.6.6-1 libx11-data_2:1.6.6-1 libx11-dev_2:1.6.6-1 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxcb1_1.13-3 libxcb1-dev_1.13-3 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxml2_2.9.4+dfsg1-7 libzstd1_1.3.4+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.16.16-2+rpi1 login_1:4.5-1.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.2.1-1.2 makedev_2.3.1-93 man-db_2.8.4-2 mawk_1.3.3-17 mount_2.32.1-0.1 multiarch-support_2.27-5+rpi1 nano_2.9.8-1 ncurses-base_6.1+20180714-1 ncurses-bin_6.1+20180714-1 netbase_5.4 openssl_1.1.0h-4 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.26.2-7 perl-base_5.26.2-7 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-7 pinentry-curses_1.1.0-1 plymouth_0.9.3-3 po-debconf_1.0.20 procps_2:3.3.15-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-aevol-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 systemd_239-7 systemd-sysv_239-7 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-2 tzdata_2018e-1 udev_239-7 util-linux_2.32.1-0.1 x11proto-core-dev_2018.4-4 x11proto-dev_2018.4-4 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Sep 25 09:15:51 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./aevol_5.0-2.dsc
dpkg-source: info: extracting aevol in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking aevol_5.0.orig.tar.gz
dpkg-source: info: unpacking aevol_5.0-2.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-df02deb1-b3d1-4f77-acd0-8417de2b7d6a
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package aevol
dpkg-buildpackage: info: source version 5.0-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build aevol-5.0
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
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checking dependency style of g++... none
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checking for g++ option to support OpenMP... -fopenmp
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
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checking for gcc option to accept ISO C89... none needed
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checking dependency style of gcc... none
checking how to run the C++ preprocessor... g++ -E
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checking host system type... arm-unknown-linux-gnueabihf
checking for boostlib >= 1.55... yes
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checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
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config.status: creating src/libaevol/SFMT-src-1.4/Makefile
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config.status: Consider using make clean if you are re-configuring.
configure: WARNING: unrecognized options: --disable-maintainer-mode
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making all in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
Making all in libaevol
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
Making all in SFMT-src-1.4
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
gcc -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I./ -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsfmt_a-SFMT.o `test -f 'SFMT.c' || echo './'`SFMT.c
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I./ -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o jump/libsfmt_a-SFMT-jump.o `test -f 'jump/SFMT-jump.cpp' || echo './'`jump/SFMT-jump.cpp
rm -f libsfmt.a
ar cru libsfmt.a libsfmt_a-SFMT.o jump/libsfmt_a-SFMT-jump.o
ar: `u' modifier ignored since `D' is the default (see `U')
ranlib libsfmt.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
Making all in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Alignment.o Alignment.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Codon.o Codon.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Dna.o Dna.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Dump.o Dump.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpManager.o ExpManager.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpSetup.o ExpSetup.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o GeneticUnit.o GeneticUnit.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o GridCell.o GridCell.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Individual.o Individual.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o IndividualFactory.o IndividualFactory.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Logging.o Logging.cpp
In file included from /usr/include/c++/8/list:64,
from Dna.h:36,
from GeneticUnit.h:35,
from GeneticUnit.cpp:33:
/usr/include/c++/8/bits/list.tcc: In member function 'std::__cxx11::list<_Tp, _Alloc>::iterator std::__cxx11::list<_Tp, _Alloc>::insert(std::__cxx11::list<_Tp, _Alloc>::const_iterator, _InputIterator, _InputIterator) [with _InputIterator = std::_List_iterator<aevol::Rna>; <template-parameter-2-2> = void; _Tp = aevol::Rna; _Alloc = std::allocator<aevol::Rna>]':
/usr/include/c++/8/bits/list.tcc:133:7: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator' {aka 'std::_List_const_iterator<aevol::Rna>'} changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:133:7: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator' {aka 'std::_List_const_iterator<aevol::Rna>'} changed in GCC 7.1
/usr/include/c++/8/bits/list.tcc:133:7: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
/usr/include/c++/8/bits/list.tcc:133:7: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
/usr/include/c++/8/bits/list.tcc:133:7: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
GeneticUnit.cpp: In member function 'void aevol::GeneticUnit::extract_leading_promoters_starting_between(int32_t, int32_t, aevol::Promoters1Strand&)':
GeneticUnit.cpp:2081:67: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator' {aka 'std::_List_const_iterator<aevol::Rna>'} changed in GCC 7.1
extracted_promoters.insert(extracted_promoters.end(), first, end);
^
GeneticUnit.cpp:2081:67: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
GeneticUnit.cpp: In member function 'void aevol::GeneticUnit::extract_lagging_promoters_starting_between(int32_t, int32_t, aevol::Promoters1Strand&)':
GeneticUnit.cpp:2110:67: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator' {aka 'std::_List_const_iterator<aevol::Rna>'} changed in GCC 7.1
extracted_promoters.insert(extracted_promoters.end(), first, end);
^
GeneticUnit.cpp:2110:67: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
GeneticUnit.cpp: In member function 'void aevol::GeneticUnit::promoters(aevol::Strand, aevol::Position, int32_t, int32_t, aevol::Promoters1Strand&)':
GeneticUnit.cpp:1993:53: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator' {aka 'std::_List_const_iterator<aevol::Rna>'} changed in GCC 7.1
promoters.insert(promoters.end(), it_begin, it_end);
^
GeneticUnit.cpp:1993:53: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Mutation.o Mutation.cpp
In file included from /usr/include/c++/8/list:64,
from Dna.h:36,
from GeneticUnit.h:35,
from GeneticUnit.cpp:33:
/usr/include/c++/8/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Rna>; _Tp = aevol::Rna; _Alloc = std::allocator<aevol::Rna>]':
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
/usr/include/c++/8/bits/list.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = std::__cxx11::list<aevol::Rna>; _Alloc = std::allocator<std::__cxx11::list<aevol::Rna> >]':
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o PointMutation.o PointMutation.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o SmallInsertion.o SmallInsertion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o SmallDeletion.o SmallDeletion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Duplication.o Duplication.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Deletion.o Deletion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Translocation.o Translocation.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Inversion.o Inversion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o InsertionHT.o InsertionHT.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ReplacementHT.o ReplacementHT.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Observable.o Observable.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o OutputManager.o OutputManager.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o MutationParams.o MutationParams.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o PhenotypicTarget.o PhenotypicTarget.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o PhenotypicTargetHandler.o PhenotypicTargetHandler.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Point.o Point.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Protein.o Protein.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o JumpingMT.o JumpingMT.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ReplicationReport.o ReplicationReport.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o DnaReplicationReport.o DnaReplicationReport.cpp
In file included from /usr/include/c++/8/list:64,
from PhenotypicTargetHandler.h:41,
from PhenotypicTargetHandler.cpp:37:
/usr/include/c++/8/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Gaussian>; _Tp = aevol::Gaussian; _Alloc = std::allocator<aevol::Gaussian>]':
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
/usr/include/c++/8/bits/list.tcc: In copy constructor 'aevol::PhenotypicTargetHandler::PhenotypicTargetHandler(const aevol::PhenotypicTargetHandler&)':
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Rna.o Rna.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Stats.o Stats.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o StatRecord.o StatRecord.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ae_string.o ae_string.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tree.o Tree.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Utils.o Utils.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o VisAVis.o VisAVis.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Selection.o Selection.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o AbstractFuzzy.o AbstractFuzzy.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o HybridFuzzy.o HybridFuzzy.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o FuzzyFactory.o FuzzyFactory.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Fuzzy.o Fuzzy.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Habitat.o Habitat.cpp
Fuzzy.cpp: In member function 'double aevol::Fuzzy::y(double, std::__cxx11::list<aevol::Point>::const_iterator) const':
Fuzzy.cpp:61:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator' {aka 'std::_List_const_iterator<aevol::Point>'} changed in GCC 7.1
double Fuzzy::y(double x, list<Point>::const_iterator begin) const {
^~~~~
Fuzzy.cpp:61:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator' {aka 'std::_List_const_iterator<aevol::Point>'} changed in GCC 7.1
Fuzzy.cpp: In member function 'double aevol::Fuzzy::y(double) const':
Fuzzy.cpp:82:11: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
~^~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp: In member function 'double aevol::Fuzzy::get_geometric_area(std::__cxx11::list<aevol::Point>::const_iterator, std::__cxx11::list<aevol::Point>::const_iterator) const':
Fuzzy.cpp:249:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator' {aka 'std::_List_const_iterator<aevol::Point>'} changed in GCC 7.1
double Fuzzy::get_geometric_area(list<Point>::const_iterator begin,
^~~~~
Fuzzy.cpp:249:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator' {aka 'std::_List_const_iterator<aevol::Point>'} changed in GCC 7.1
Fuzzy.cpp: In member function 'virtual double aevol::Fuzzy::get_geometric_area() const':
Fuzzy.cpp:244:28: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return get_geometric_area(points_.begin(), points_.end());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp: In member function 'virtual double aevol::Fuzzy::get_geometric_area(double, double) const':
Fuzzy.cpp:82:11: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
~^~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp:82:11: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
~^~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp:276:41: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator' {aka 'std::_List_const_iterator<aevol::Point>'} changed in GCC 7.1
return first_part + get_geometric_area(begin, end) + last_part;
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
Fuzzy.cpp: In member function 'std::__cxx11::list<aevol::Point>::iterator aevol::Fuzzy::create_interpolated_point(double, std::__cxx11::list<aevol::Point>::iterator)':
Fuzzy.cpp:382:23: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator' {aka 'std::_List_iterator<aevol::Point>'} changed in GCC 7.1
list<Point>::iterator Fuzzy::create_interpolated_point(double x, std::list<Point>::iterator start) {
^~~~~
Fuzzy.cpp:382:23: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator' {aka 'std::_List_iterator<aevol::Point>'} changed in GCC 7.1
Fuzzy.cpp:82:11: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
~^~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp: In member function 'std::__cxx11::list<aevol::Point>::iterator aevol::Fuzzy::create_interpolated_point(double)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp: In member function 'virtual void aevol::Fuzzy::add(const aevol::AbstractFuzzy&)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp:82:11: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
~^~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp: In member function 'virtual void aevol::Fuzzy::sub(const aevol::AbstractFuzzy&)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp:82:11: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
~^~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp: In function 'virtual void aevol::Fuzzy::add_triangle(double, double, double)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp:179:42: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator' {aka 'std::_List_iterator<aevol::Point>'} changed in GCC 7.1
p1 = create_interpolated_point(mean, p0);
^
Fuzzy.cpp:180:58: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator' {aka 'std::_List_iterator<aevol::Point>'} changed in GCC 7.1
if (x2 <= X_MAX) p2 = create_interpolated_point(x2, p1);
^
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ParamLoader.o ParamLoader.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ParameterLine.o ParameterLine.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o AeTime.o AeTime.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o World.o World.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o HabitatFactory.o HabitatFactory.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Individual_X11.o Individual_X11.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpManager_X11.o ExpManager_X11.cpp
In file included from /usr/include/c++/8/list:64,
from ParamLoader.cpp:38:
/usr/include/c++/8/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Gaussian>; _Tp = aevol::Gaussian; _Alloc = std::allocator<aevol::Gaussian>]':
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o X11Window.o X11Window.cpp
/usr/include/c++/8/bits/list.tcc: In member function 'void aevol::ParamLoader::load(aevol::ExpManager*, bool, char*, int32_t, char*, int32_t)':
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
rm -f libaevol.a
ar cru libaevol.a Alignment.o Codon.o Dna.o Dump.o ExpManager.o ExpSetup.o GeneticUnit.o GridCell.o Individual.o IndividualFactory.o Logging.o Mutation.o PointMutation.o SmallInsertion.o SmallDeletion.o Duplication.o Deletion.o Translocation.o Inversion.o InsertionHT.o ReplacementHT.o Observable.o OutputManager.o MutationParams.o PhenotypicTarget.o PhenotypicTargetHandler.o Point.o Protein.o JumpingMT.o ReplicationReport.o DnaReplicationReport.o Rna.o Stats.o StatRecord.o ae_string.o Tree.o Utils.o VisAVis.o Selection.o AbstractFuzzy.o HybridFuzzy.o FuzzyFactory.o Fuzzy.o Habitat.o ParamLoader.o ParameterLine.o AeTime.o World.o HabitatFactory.o Individual_X11.o ExpManager_X11.o X11Window.o
ar: `u' modifier ignored since `D' is the default (see `U')
ranlib libaevol.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
Making all in post_treatments
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ancestor_stats.o ancestor_stats.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ancestor_robustness.o ancestor_robustness.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o IndivAnalysis.o IndivAnalysis.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o create_eps.o create_eps.cpp
ancestor_robustness.cpp:48:33: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
static char* output_file_name = "robustness_summary.txt";
^~~~~~~~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract.o extract.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o lineage.o lineage.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mutagenesis.o mutagenesis.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o robustness.o robustness.cpp
robustness.cpp: In function 'int main(int, char**)':
robustness.cpp:115:27: warning: '/robustness-summary-' directive output may be truncated writing 20 bytes into a region of size between 1 and 255 [-Wformat-truncation=]
snprintf(filename, 255, "%s/robustness-summary-%" PRId64 "-i%" PRId32 "-r%" PRId32,
^
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from robustness.cpp:33:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 28 and 321 bytes into a destination of size 255
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
robustness.cpp:121:27: warning: '/robustness-detailed-' directive output may be truncated writing 21 bytes into a region of size between 1 and 255 [-Wformat-truncation=]
snprintf(filename, 255, "%s/robustness-detailed-%" PRId64 "-i%" PRId32 "-r%" PRId32,
^
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from robustness.cpp:33:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 29 and 322 bytes into a destination of size 255
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o view.o view.cpp
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_ancestor_stats ancestor_stats.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_ancestor_robustness ancestor_robustness.o IndivAnalysis.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_create_eps create_eps.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_extract extract.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_lineage lineage.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_robustness robustness.o IndivAnalysis.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_mutagenesis mutagenesis.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_view view.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_run.o aevol_run.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_create.o aevol_create.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_modify.o aevol_modify.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_propagate-aevol_propagate.o `test -f 'aevol_propagate.cpp' || echo './'`aevol_propagate.cpp
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o aevol_create aevol_create.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o aevol_run aevol_run.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
In file included from /usr/include/c++/8/list:64,
from aevol_modify.cpp:38:
/usr/include/c++/8/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Gaussian>; _Tp = aevol::Gaussian; _Alloc = std::allocator<aevol::Gaussian>]':
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:308:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
/usr/include/c++/8/bits/list.tcc: In function 'int main(int, char**)':
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/list.tcc:286:4: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
^~~~~~~~~~~~~~~~~~
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o aevol_modify aevol_modify.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L/usr/lib/arm-linux-gnueabihf -Wl,-z,relro -Wl,-z,now -o aevol_propagate aevol_propagate-aevol_propagate.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lboost_system -lboost_filesystem -lX11 -lz -lm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making all in doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Nothing to be done for 'all-am'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 check VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making check in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
Making check in libaevol
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
Making check in SFMT-src-1.4
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[4]: Nothing to be done for 'check'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
Making check in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
make[4]: Nothing to be done for 'check-am'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
Making check in post_treatments
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Nothing to be done for 'check'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making check in doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[2]: Nothing to be done for 'check'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Nothing to be done for 'check-am'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/aevol AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making install in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
Making install in libaevol
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
Making install in SFMT-src-1.4
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
Making install in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
Making install in post_treatments
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
/usr/bin/install -c aevol_misc_ancestor_stats aevol_misc_ancestor_robustness aevol_misc_create_eps aevol_misc_extract aevol_misc_lineage aevol_misc_mutagenesis aevol_misc_robustness aevol_misc_view '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
/usr/bin/install -c aevol_run aevol_create aevol_modify aevol_propagate '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making install in doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/aevol/usr/share/man/man1'
/usr/bin/install -c -m 644 aevol_create.1 aevol_run.1 aevol_modify.1 aevol_propagate.1 aevol_misc_lineage.1 aevol_misc_ancestor_stats.1 aevol_misc_robustness.1 aevol_misc_compute_pop_stats.1 aevol_misc_view.1 aevol_misc_create_eps.1 aevol_misc_extract.1 aevol_misc_gene_families.1 '/<<PKGBUILDDIR>>/debian/aevol/usr/share/man/man1'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_modify contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_view contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_robustness contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_ancestor_stats contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_run contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_ancestor_robustness contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_lineage contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_extract contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_create_eps contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_mutagenesis contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_propagate contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_create contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/aevol/usr/bin/aevol_modify debian/aevol/usr/bin/aevol_misc_view debian/aevol/usr/bin/aevol_misc_robustness debian/aevol/usr/bin/aevol_misc_ancestor_stats debian/aevol/usr/bin/aevol_run debian/aevol/usr/bin/aevol_misc_ancestor_robustness debian/aevol/usr/bin/aevol_misc_lineage debian/aevol/usr/bin/aevol_misc_extract debian/aevol/usr/bin/aevol_misc_create_eps debian/aevol/usr/bin/aevol_misc_mutagenesis debian/aevol/usr/bin/aevol_propagate debian/aevol/usr/bin/aevol_create were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'aevol' in '../aevol_5.0-2_armhf.deb'.
dpkg-deb: building package 'aevol-dbgsym' in '../aevol-dbgsym_5.0-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../aevol_5.0-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build aevol-5.0
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-09-30T04:57:12Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
aevol_5.0-2_armhf.changes:
--------------------------
Format: 1.8
Date: Tue, 25 Sep 2018 11:05:21 +0200
Source: aevol
Binary: aevol
Architecture: armhf
Version: 5.0-2
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
aevol - digital genetics model to run Evolution Experiments in silico
Changes:
aevol (5.0-2) unstable; urgency=medium
.
* Team upload.
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
Checksums-Sha1:
70c260b4f477e4d6f4546c837042e12a1d64d828 25664820 aevol-dbgsym_5.0-2_armhf.deb
ba6bded74de19eba68955e173c9e499652397890 5324 aevol_5.0-2_armhf.buildinfo
49c7177f37e66a5b413c81972ed535a5dfa695dd 362496 aevol_5.0-2_armhf.deb
Checksums-Sha256:
e891b456ce9a25a9be271c29ec93a0ce56385887dbd70381e0b91ad993963c39 25664820 aevol-dbgsym_5.0-2_armhf.deb
16cd249a24145c5ab9c46371fd0fedd821d06f5bfcba140c93a397d6cf9368d4 5324 aevol_5.0-2_armhf.buildinfo
f06270d2e689b5b15249add70189cfed6028e2b5c1bb6243e5b788e8458f9b1e 362496 aevol_5.0-2_armhf.deb
Files:
45ea2edbf99981eaf6dd16c6f87887b1 25664820 debug optional aevol-dbgsym_5.0-2_armhf.deb
d8159d6b9610cb374cf526af5cceb1db 5324 science optional aevol_5.0-2_armhf.buildinfo
e5d30d1b02785d4f12381c344cb85b7e 362496 science optional aevol_5.0-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
aevol-dbgsym_5.0-2_armhf.deb
----------------------------
new Debian package, version 2.0.
size 25664820 bytes: control archive=1088 bytes.
811 bytes, 12 lines control
1272 bytes, 12 lines md5sums
Package: aevol-dbgsym
Source: aevol
Version: 5.0-2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 26469
Depends: aevol (= 5.0-2)
Section: debug
Priority: optional
Description: debug symbols for aevol
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aevol_5.0-2_armhf.deb
---------------------
new Debian package, version 2.0.
size 362496 bytes: control archive=1892 bytes.
1355 bytes, 26 lines control
2236 bytes, 32 lines md5sums
Package: aevol
Version: 5.0-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 3615
Depends: libboost-filesystem1.62.0, libboost-system1.62.0, libc6 (>= 2.15), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), libx11-6, zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: http://www.aevol.fr/
Description: digital genetics model to run Evolution Experiments in silico
Aevol is a digital genetics model: populations of digital organisms are
subjected to a process of selection and variation, which creates a
Darwinian dynamics.
.
By modifying the characteristics of selection (e.g. population size,
type of environment, environmental variations) or variation (e.g.
mutation rates, chromosomal rearrangement rates, types of
rearrangements, horizontal transfer), one can study experimentally the
impact of these parameters on the structure of the evolved organisms.
In particular, since Aevol integrates a precise and realistic model of
the genome, it allows for the study of structural variations of the
genome (e.g. number of genes, synteny, proportion of coding sequences).
.
The simulation platform comes along with a set of tools for analysing
phylogenies and measuring many characteristics of the organisms and
populations along evolution.
drwxr-xr-x root/root 0 2018-09-25 09:05 ./
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/bin/
-rwxr-xr-x root/root 292464 2018-09-25 09:05 ./usr/bin/aevol_create
-rwxr-xr-x root/root 296620 2018-09-25 09:05 ./usr/bin/aevol_misc_ancestor_robustness
-rwxr-xr-x root/root 304748 2018-09-25 09:05 ./usr/bin/aevol_misc_ancestor_stats
-rwxr-xr-x root/root 304764 2018-09-25 09:05 ./usr/bin/aevol_misc_create_eps
-rwxr-xr-x root/root 300692 2018-09-25 09:05 ./usr/bin/aevol_misc_extract
-rwxr-xr-x root/root 296620 2018-09-25 09:05 ./usr/bin/aevol_misc_lineage
-rwxr-xr-x root/root 308888 2018-09-25 09:05 ./usr/bin/aevol_misc_mutagenesis
-rwxr-xr-x root/root 300688 2018-09-25 09:05 ./usr/bin/aevol_misc_robustness
-rwxr-xr-x root/root 308820 2018-09-25 09:05 ./usr/bin/aevol_misc_view
-rwxr-xr-x root/root 321128 2018-09-25 09:05 ./usr/bin/aevol_modify
-rwxr-xr-x root/root 312968 2018-09-25 09:05 ./usr/bin/aevol_propagate
-rwxr-xr-x root/root 308936 2018-09-25 09:05 ./usr/bin/aevol_run
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/share/
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/share/doc/aevol/
-rw-r--r-- root/root 6502 2016-06-07 13:03 ./usr/share/doc/aevol/NEWS.gz
-rw-r--r-- root/root 2249 2016-06-23 14:42 ./usr/share/doc/aevol/README
-rw-r--r-- root/root 491 2018-09-25 09:05 ./usr/share/doc/aevol/changelog.Debian.gz
-rw-r--r-- root/root 21 2014-10-20 11:07 ./usr/share/doc/aevol/changelog.gz
-rw-r--r-- root/root 1618 2018-09-25 09:05 ./usr/share/doc/aevol/copyright
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/share/man/
drwxr-xr-x root/root 0 2018-09-25 09:05 ./usr/share/man/man1/
-rw-r--r-- root/root 622 2018-09-25 09:05 ./usr/share/man/man1/aevol_create.1.gz
-rw-r--r-- root/root 566 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_ancestor_stats.1.gz
-rw-r--r-- root/root 526 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_ancstats.1.gz
-rw-r--r-- root/root 691 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_compute_pop_stats.1.gz
-rw-r--r-- root/root 567 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_create_eps.1.gz
-rw-r--r-- root/root 732 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_extract.1.gz
-rw-r--r-- root/root 541 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_fixed_mutations.1.gz
-rw-r--r-- root/root 540 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_gene_families.1.gz
-rw-r--r-- root/root 633 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_lineage.1.gz
-rw-r--r-- root/root 955 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_robustness.1.gz
-rw-r--r-- root/root 505 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_view.1.gz
-rw-r--r-- root/root 508 2018-09-25 09:05 ./usr/share/man/man1/aevol_misc_view_generation.1.gz
-rw-r--r-- root/root 506 2018-09-25 09:05 ./usr/share/man/man1/aevol_modify.1.gz
-rw-r--r-- root/root 1133 2018-09-25 09:05 ./usr/share/man/man1/aevol_propagate.1.gz
-rw-r--r-- root/root 643 2018-09-25 09:05 ./usr/share/man/man1/aevol_run.1.gz
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| Post Build |
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| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 164464
Build-Time: 476
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 410
Job: aevol_5.0-2
Machine Architecture: armhf
Package: aevol
Package-Time: 942
Source-Version: 5.0-2
Space: 164464
Status: successful
Version: 5.0-2
--------------------------------------------------------------------------------
Finished at 2018-09-30T04:57:12Z
Build needed 00:15:42, 164464k disc space