aevol →
5.0-1 →
armhf → 2017-09-17 05:24:48
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| aevol 5.0-1 (armhf) Sun, 17 Sep 2017 05:18:34 +0000 |
+==============================================================================+
Package: aevol
Version: 5.0-1
Source Version: 5.0-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-5889518e-3b53-45d0-85fc-d7b7ac4b990b' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.2 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.1 MB]
Fetched 22.3 MB in 8s (2747 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'aevol' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/aevol.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/aevol.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 578 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main aevol 5.0-1 (dsc) [1980 B]
Get:2 http://172.17.0.1/private buster-staging/main aevol 5.0-1 (tar) [570 kB]
Get:3 http://172.17.0.1/private buster-staging/main aevol 5.0-1 (diff) [6044 B]
Fetched 578 kB in 0s (5753 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/aevol-FFjXTR/aevol-5.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/aevol-FFjXTR' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-Gh275m/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-Gh275m/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-Gh275m/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Packages [430 B]
Fetched 2106 B in 0s (8294 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 56 not upgraded.
Need to get 772 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [772 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 772 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15017 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), zlib1g-dev, libx11-dev, libboost-dev, libboost-system-dev, libboost-filesystem-dev
Filtered Build-Depends: debhelper (>= 10), zlib1g-dev, libx11-dev, libboost-dev, libboost-system-dev, libboost-filesystem-dev
dpkg-deb: building package 'sbuild-build-depends-aevol-dummy' in '/<<BUILDDIR>>/resolver-Gh275m/apt_archive/sbuild-build-depends-aevol-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-aevol-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Sources [515 B]
Get:5 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ Packages [598 B]
Fetched 2446 B in 0s (9618 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install aevol build dependencies (apt-based resolver)
-----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libboost-dev libboost-filesystem-dev
libboost-filesystem1.62-dev libboost-filesystem1.62.0 libboost-system-dev
libboost-system1.62-dev libboost-system1.62.0 libboost1.62-dev libbsd0
libcroco3 libfile-stripnondeterminism-perl libglib2.0-0 libicu57
libmagic-mgc libmagic1 libpipeline1 libpthread-stubs0-dev libsigsegv2
libtimedate-perl libtool libx11-6 libx11-data libx11-dev libxau-dev libxau6
libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxml2 m4 man-db po-debconf
x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools
xtrans-dev zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libboost-doc libboost1.62-doc libboost-atomic1.62-dev
libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-graph1.62-dev libboost-graph-parallel1.62-dev
libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev
libboost-math1.62-dev libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-python1.62-dev
libboost-random1.62-dev libboost-regex1.62-dev
libboost-serialization1.62-dev libboost-signals1.62-dev
libboost-test1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev
libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev
libmpfrc++-dev libntl-dev libtool-doc gfortran | fortran95-compiler gcj-jdk
libxcb-doc m4-doc less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libx11-doc libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libboost-dev libboost-filesystem-dev
libboost-filesystem1.62-dev libboost-filesystem1.62.0 libboost-system-dev
libboost-system1.62-dev libboost-system1.62.0 libboost1.62-dev libbsd0
libcroco3 libfile-stripnondeterminism-perl libglib2.0-0 libicu57
libmagic-mgc libmagic1 libpipeline1 libpthread-stubs0-dev libsigsegv2
libtimedate-perl libtool libx11-6 libx11-data libx11-dev libxau-dev libxau6
libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxml2 m4 man-db po-debconf
sbuild-build-depends-aevol-dummy x11proto-core-dev x11proto-input-dev
x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 54 newly installed, 0 to remove and 56 not upgraded.
Need to get 29.4 MB of archives.
After this operation, 191 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-Gh275m/apt_archive ./ sbuild-build-depends-aevol-dummy 0.invalid.0 [802 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.6-2 [95.8 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.12+nmu1 [178 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.2-1 [24.2 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.32-1 [225 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.32-1 [105 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.32-1 [63.7 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-6 [7427 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-4 [609 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.11-1 [29.3 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-2.1 [736 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.038-1 [17.6 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.038-1 [11.1 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.53.6-1 [2644 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-1 [132 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.8 [973 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libboost1.62-dev armhf 1.62.0+dfsg-4 [7009 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libboost-dev armhf 1.62.0.1+b6 [3916 B]
Get:33 http://172.17.0.1/private buster-staging/main armhf libboost-system1.62.0 armhf 1.62.0+dfsg-4 [32.1 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libboost-filesystem1.62.0 armhf 1.62.0+dfsg-4 [58.0 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libboost-system1.62-dev armhf 1.62.0+dfsg-4 [33.1 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libboost-filesystem1.62-dev armhf 1.62.0+dfsg-4 [66.1 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libboost-filesystem-dev armhf 1.62.0.1+b6 [3728 B]
Get:38 http://172.17.0.1/private buster-staging/main armhf libboost-system-dev armhf 1.62.0.1+b6 [3834 B]
Get:39 http://172.17.0.1/private buster-staging/main armhf libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:40 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.12-1 [129 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.4-3 [290 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.4-3 [683 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf x11proto-core-dev all 7.0.31-1 [728 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf x11proto-input-dev all 2.3.2-1 [158 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf x11proto-kb-dev all 1.0.7-1 [233 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libxcb1-dev armhf 1.12-1 [165 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libx11-dev armhf 2:1.6.4-3 [753 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-5 [198 kB]
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Setting up libarchive-zip-perl (1.59-1) ...
Setting up libboost1.62-dev:armhf (1.62.0+dfsg-4) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.11-1) ...
Setting up libpthread-stubs0-dev:armhf (0.3-4) ...
Setting up groff-base (1.22.3-9) ...
Setting up libglib2.0-0:armhf (2.53.6-1) ...
No schema files found: doing nothing.
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up gettext-base (0.19.8.1-4) ...
Setting up libpipeline1:armhf (1.4.2-1) ...
Setting up x11proto-kb-dev (1.0.7-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-6) ...
Setting up libbsd0:armhf (0.8.6-2) ...
Setting up libxml2:armhf (2.9.4+dfsg1-4) ...
Setting up libmagic-mgc (1:5.32-1) ...
Setting up libmagic1:armhf (1:5.32-1) ...
Setting up libcroco3:armhf (0.6.12-1) ...
Setting up xtrans-dev (1.3.5-1) ...
Processing triggers for libc-bin (2.24-14) ...
Setting up autotools-dev (20161112.1) ...
Setting up libboost-dev:armhf (1.62.0.1+b6) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up bsdmainutils (9.0.12+nmu1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libx11-data (2:1.6.4-3) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-4) ...
Setting up libboost-system1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
Setting up libfile-stripnondeterminism-perl (0.038-1) ...
Setting up x11proto-core-dev (7.0.31-1) ...
Setting up gettext (0.19.8.1-4) ...
Setting up libxau-dev:armhf (1:1.0.8-1+b2) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.32-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libboost-system1.62-dev:armhf (1.62.0+dfsg-4) ...
Setting up libboost-filesystem1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up automake (1:1.15.1-2.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxcb1:armhf (1.12-1) ...
Setting up x11proto-input-dev (2.3.2-1) ...
Setting up libtool (2.4.6-2) ...
Setting up libboost-filesystem1.62-dev:armhf (1.62.0+dfsg-4) ...
Setting up po-debconf (1.0.20) ...
Setting up libboost-system-dev:armhf (1.62.0.1+b6) ...
Setting up libx11-6:armhf (2:1.6.4-3) ...
Setting up libboost-filesystem-dev:armhf (1.62.0.1+b6) ...
Setting up libxcb1-dev:armhf (1.12-1) ...
Setting up libx11-dev:armhf (2:1.6.4-3) ...
Setting up debhelper (10.8) ...
Setting up dh-autoreconf (14) ...
Setting up dh-strip-nondeterminism (0.038-1) ...
Setting up sbuild-build-depends-aevol-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-14) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.29-4+rpi1 dpkg-dev_1.18.24 g++-7_7.2.0-1 gcc-7_7.2.0-1 libc6-dev_2.24-14 libstdc++-7-dev_7.2.0-1 libstdc++6_7.2.0-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.116 apt_1.5~rc1 autoconf_2.69-11 automake_1:1.15.1-2.1 autopoint_0.19.8.1-4 autotools-dev_20161112.1 base-files_10+rpi1 base-passwd_3.5.43 bash_4.4-5 binutils_2.29-4+rpi1 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-2+rpi1 build-essential_12.3 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:7.1.0-2 cpp-7_7.2.0-1 dash_0.5.8-2.5 debconf_1.5.63 debhelper_10.8 debianutils_4.8.2 dh-autoreconf_14 dh-strip-nondeterminism_0.038-1 diffutils_1:3.6-1 dirmngr_2.1.23-2 dmsetup_2:1.02.142-1 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.6-1 e2fsprogs_1.43.6-1 fakeroot_1.22-1 file_1:5.32-1 findutils_4.6.0+git+20170729-2 g++_4:7.1.0-2 g++-7_7.2.0-1 gcc_4:7.1.0-2 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-7_7.2.0-1 gcc-7-base_7.2.0-1 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gnupg_2.1.23-2 gnupg-agent_2.1.23-2 gnupg-l10n_2.1.23-2 gnupg-utils_2.1.23-2 gpg_2.1.23-2 gpg-agent_2.1.23-2 gpg-wks-client_2.1.23-2 gpg-wks-server_2.1.23-2 gpgconf_2.1.23-2 gpgsm_2.1.23-2 gpgv_2.1.23-2 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 init-system-helpers_1.49 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libapparmor1_2.11.0-10 libapt-pkg5.0_1.5~rc1 libarchive-zip-perl_1.59-1 libasan4_7.2.0-1 libassuan0_2.4.3-3 libatomic1_7.2.0-1 libattr1_1:2.4.47-2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b1 libblkid1_2.29.2-2+rpi1 libboost-dev_1.62.0.1+b6 libboost-filesystem-dev_1.62.0.1+b6 libboost-filesystem1.62-dev_1.62.0+dfsg-4 libboost-filesystem1.62.0_1.62.0+dfsg-4 libboost-system-dev_1.62.0.1+b6 libboost-system1.62-dev_1.62.0+dfsg-4 libboost-system1.62.0_1.62.0+dfsg-4 libboost1.62-dev_1.62.0+dfsg-4 libbsd0_0.8.6-2 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-14 libc-dev-bin_2.24-14 libc6_2.24-14 libc6-dev_2.24-14 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_7.2.0-1 libcilkrts5_7.2.0-1 libcomerr2_1.43.6-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4 libdb5.3_5.3.28-13+rpi1 libdbus-1-3_1.11.16+really1.10.22-1 libdebconfclient0_0.229 libdevmapper1.02.1_2:1.02.142-1 libdpkg-perl_1.18.24 libdrm-common_2.4.82-1+rpi1 libdrm2_2.4.82-1+rpi1 libfakeroot_1.22-1 libfdisk1_2.29.2-2+rpi1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.038-1 libgcc-7-dev_7.2.0-1 libgcc1_1:7.2.0-1 libgcrypt20_1.7.9-1 libgdbm3_1.8.3-14 libglib2.0-0_2.53.6-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.15-2 libgomp1_7.2.0-1 libgpg-error0_1.27-3 libhogweed4_3.3-1 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_2.0.2-3 libip4tc0_1.6.1-2 libisl15_0.18-1 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.29.2-2+rpi1 libmpc3_1.0.3-1+b2 libmpfr4_3.1.6~rc1-1 libncurses5_6.0+20170715-2 libncursesw5_6.0+20170715-2 libnettle6_3.3-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.5-2 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-4 libperl5.24_5.24.1-7 libperl5.26_5.26.0-5 libpipeline1_1.4.2-1 libplymouth4_0.9.2-5 libpng16-16_1.6.32-1 libprocps6_2:3.3.12-3 libpthread-stubs0-dev_0.3-4 libreadline5_5.2+dfsg-3 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-2 libsemanage1_2.6-2 libsepol1_2.6-2 libsigsegv2_2.11-1 libsmartcols1_2.29.2-2+rpi1 libsqlite3-0_3.19.3-3 libss2_1.43.6-1 libssl1.1_1.1.0f-5 libstdc++-7-dev_7.2.0-1 libstdc++6_7.2.0-1 libsystemd0_234-2.3 libtasn1-6_4.12-2.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20170715-2 libtool_2.4.6-2 libubsan0_7.2.0-1 libudev1_234-2.3 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-2+rpi1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libx11-dev_2:1.6.4-3 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxcb1_1.12-1 libxcb1-dev_1.12-1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxml2_2.9.4+dfsg1-4 linux-base_4.5 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.4-4.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mount_2.29.2-2+rpi1 mountall_2.54 multiarch-support_2.24-14 ncurses-base_6.0+20170715-2 ncurses-bin_6.0+20170715-2 openssl_1.1.0f-5 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.26.0-5 perl-base_5.26.0-5 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.0-5 pinentry-curses_1.0.0-2 plymouth_0.9.2-5 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-aevol-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_234-2.3 sysvinit-utils_2.88dsf-59.9 tar_1.29b-2 tzdata_2017b-2 udev_234-2.3 util-linux_2.29.2-2+rpi1 x11proto-core-dev_7.0.31-1 x11proto-input-dev_2.3.2-1 x11proto-kb-dev_1.0.7-1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Sep 11 18:48:47 2017 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./aevol_5.0-1.dsc
dpkg-source: info: extracting aevol in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking aevol_5.0.orig.tar.gz
dpkg-source: info: unpacking aevol_5.0-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-5889518e-3b53-45d0-85fc-d7b7ac4b990b
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package aevol
dpkg-buildpackage: info: source version 5.0-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build aevol-5.0
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_auto_clean
dh_autoreconf_clean
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for clang-omp++... no
checking for clang++... no
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... none
checking whether g++ supports C++14 features by default... yes
checking whether g++ supports C++11 features by default... yes
checking for ranlib... ranlib
checking for g++ option to support OpenMP... -fopenmp
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking how to run the C++ preprocessor... g++ -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking omp.h usability... yes
checking omp.h presence... yes
checking for omp.h... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking for boostlib >= 1.55... yes
checking whether the Boost::System library is available... yes
checking for exit in -lboost_system... yes
checking whether the Boost::Filesystem library is available... yes
checking for exit in -lboost_filesystem... yes
checking for cos in -lm... yes
checking for gzread in -lz... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for stdint.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stdbool.h that conforms to C99... no
checking for _Bool... no
checking for inline... inline
checking for int16_t... yes
checking for int32_t... yes
checking for int8_t... yes
checking for size_t... yes
checking for uint32_t... yes
checking for uint8_t... yes
checking for floor... yes
checking for memset... yes
checking for mkdir... yes
checking for pow... yes
checking for rint... yes
checking for sqrt... yes
checking for gzread... yes
checking whether to enable graphical outputs... yes
checking for X... libraries , headers
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... no
checking for XOpenDisplay in -lX11... yes
checking X11/Xlib.h usability... yes
checking X11/Xlib.h presence... yes
checking for X11/Xlib.h... yes
checking X11/Xutil.h usability... yes
checking X11/Xutil.h presence... yes
checking for X11/Xutil.h... yes
checking X11/keysym.h usability... yes
checking X11/keysym.h presence... yes
checking for X11/keysym.h... yes
checking X11/Xatom.h usability... yes
checking X11/Xatom.h presence... yes
checking for X11/Xatom.h... yes
checking X11/cursorfont.h usability... yes
checking X11/cursorfont.h presence... yes
checking for X11/cursorfont.h... yes
checking whether to use compile time optimization... yes
checking whether to use normalized fitness... no
checking whether to use a particular period for the Mersenne Twister... 607
checking whether to use trivial Mersenne Twister jumps... no
checking whether to use devel features... no
checking whether to use debugging features... no
checking whether to enable profiling... no
checking whether to use raevol... no
checking whether to use BLAS library... no
checking whether to use MKL library... no
checking whether to use ATLAS library... no
checking whether to use TBB library... no
checking whether to use tracing... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/libaevol/Makefile
config.status: creating src/libaevol/SFMT-src-1.4/Makefile
config.status: creating src/post_treatments/Makefile
config.status: creating doc/Makefile
config.status: executing depfiles commands
config.status: executing user_warning commands
config.status: Consider using make clean if you are re-configuring.
configure: WARNING: unrecognized options: --disable-maintainer-mode
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making all in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
Making all in libaevol
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
Making all in SFMT-src-1.4
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
gcc -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I./ -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsfmt_a-SFMT.o `test -f 'SFMT.c' || echo './'`SFMT.c
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I./ -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o jump/libsfmt_a-SFMT-jump.o `test -f 'jump/SFMT-jump.cpp' || echo './'`jump/SFMT-jump.cpp
rm -f libsfmt.a
ar cru libsfmt.a libsfmt_a-SFMT.o jump/libsfmt_a-SFMT-jump.o
ar: `u' modifier ignored since `D' is the default (see `U')
ranlib libsfmt.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
Making all in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Alignment.o Alignment.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Codon.o Codon.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Dna.o Dna.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Dump.o Dump.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpManager.o ExpManager.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpSetup.o ExpSetup.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o GeneticUnit.o GeneticUnit.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o GridCell.o GridCell.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Individual.o Individual.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o IndividualFactory.o IndividualFactory.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Logging.o Logging.cpp
In file included from /usr/include/c++/7/list:64:0,
from Dna.h:36,
from GeneticUnit.h:35,
from GeneticUnit.cpp:33:
/usr/include/c++/7/bits/list.tcc: In member function 'std::__cxx11::list<_Tp, _Alloc>::iterator std::__cxx11::list<_Tp, _Alloc>::insert(std::__cxx11::list<_Tp, _Alloc>::const_iterator, _InputIterator, _InputIterator) [with _InputIterator = std::_List_iterator<aevol::Rna>; <template-parameter-2-2> = void; _Tp = aevol::Rna; _Alloc = std::allocator<aevol::Rna>]':
/usr/include/c++/7/bits/list.tcc:132:7: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator {aka std::_List_const_iterator<aevol::Rna>}' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:132:7: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator {aka std::_List_const_iterator<aevol::Rna>}' changed in GCC 7.1
/usr/include/c++/7/bits/list.tcc:132:7: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
/usr/include/c++/7/bits/list.tcc:132:7: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
/usr/include/c++/7/bits/list.tcc:132:7: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Mutation.o Mutation.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o PointMutation.o PointMutation.cpp
GeneticUnit.cpp: In member function 'void aevol::GeneticUnit::extract_leading_promoters_starting_between(int32_t, int32_t, aevol::Promoters1Strand&)':
GeneticUnit.cpp:2081:29: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator {aka std::_List_const_iterator<aevol::Rna>}' changed in GCC 7.1
extracted_promoters.insert(extracted_promoters.end(), first, end);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GeneticUnit.cpp:2081:29: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
GeneticUnit.cpp: In member function 'void aevol::GeneticUnit::extract_lagging_promoters_starting_between(int32_t, int32_t, aevol::Promoters1Strand&)':
GeneticUnit.cpp:2110:29: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator {aka std::_List_const_iterator<aevol::Rna>}' changed in GCC 7.1
extracted_promoters.insert(extracted_promoters.end(), first, end);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GeneticUnit.cpp:2110:29: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
GeneticUnit.cpp: In member function 'void aevol::GeneticUnit::promoters(aevol::Strand, aevol::Position, int32_t, int32_t, aevol::Promoters1Strand&)':
GeneticUnit.cpp:1993:19: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Rna>::const_iterator {aka std::_List_const_iterator<aevol::Rna>}' changed in GCC 7.1
promoters.insert(promoters.end(), it_begin, it_end);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GeneticUnit.cpp:1993:19: note: parameter passing for argument of type 'std::_List_iterator<aevol::Rna>' changed in GCC 7.1
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o SmallInsertion.o SmallInsertion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o SmallDeletion.o SmallDeletion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Duplication.o Duplication.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Deletion.o Deletion.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Translocation.o Translocation.cpp
In file included from /usr/include/c++/7/list:64:0,
from Dna.h:36,
from GeneticUnit.h:35,
from GeneticUnit.cpp:33:
/usr/include/c++/7/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Rna>; _Tp = aevol::Rna; _Alloc = std::allocator<aevol::Rna>]':
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Inversion.o Inversion.cpp
/usr/include/c++/7/bits/list.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = std::__cxx11::list<aevol::Rna>; _Alloc = std::allocator<std::__cxx11::list<aevol::Rna> >]':
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Rna>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o InsertionHT.o InsertionHT.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ReplacementHT.o ReplacementHT.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Observable.o Observable.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o OutputManager.o OutputManager.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o MutationParams.o MutationParams.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o PhenotypicTarget.o PhenotypicTarget.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o PhenotypicTargetHandler.o PhenotypicTargetHandler.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Point.o Point.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Protein.o Protein.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o JumpingMT.o JumpingMT.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ReplicationReport.o ReplicationReport.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o DnaReplicationReport.o DnaReplicationReport.cpp
In file included from /usr/include/c++/7/list:64:0,
from PhenotypicTargetHandler.h:41,
from PhenotypicTargetHandler.cpp:37:
/usr/include/c++/7/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Gaussian>; _Tp = aevol::Gaussian; _Alloc = std::allocator<aevol::Gaussian>]':
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
/usr/include/c++/7/bits/list.tcc: In copy constructor 'aevol::PhenotypicTargetHandler::PhenotypicTargetHandler(const aevol::PhenotypicTargetHandler&)':
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Rna.o Rna.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Stats.o Stats.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o StatRecord.o StatRecord.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ae_string.o ae_string.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tree.o Tree.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Utils.o Utils.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o VisAVis.o VisAVis.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Selection.o Selection.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o AbstractFuzzy.o AbstractFuzzy.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o HybridFuzzy.o HybridFuzzy.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o FuzzyFactory.o FuzzyFactory.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Fuzzy.o Fuzzy.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Habitat.o Habitat.cpp
Fuzzy.cpp: In member function 'double aevol::Fuzzy::y(double, std::__cxx11::list<aevol::Point>::const_iterator) const':
Fuzzy.cpp:61:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator {aka std::_List_const_iterator<aevol::Point>}' changed in GCC 7.1
double Fuzzy::y(double x, list<Point>::const_iterator begin) const {
^~~~~
Fuzzy.cpp: In member function 'double aevol::Fuzzy::y(double) const':
Fuzzy.cpp:82:30: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
^
Fuzzy.cpp: In member function 'double aevol::Fuzzy::get_geometric_area(std::__cxx11::list<aevol::Point>::const_iterator, std::__cxx11::list<aevol::Point>::const_iterator) const':
Fuzzy.cpp:249:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator {aka std::_List_const_iterator<aevol::Point>}' changed in GCC 7.1
double Fuzzy::get_geometric_area(list<Point>::const_iterator begin,
^~~~~
Fuzzy.cpp:249:8: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator {aka std::_List_const_iterator<aevol::Point>}' changed in GCC 7.1
Fuzzy.cpp: In member function 'virtual double aevol::Fuzzy::get_geometric_area() const':
Fuzzy.cpp:244:59: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return get_geometric_area(points_.begin(), points_.end());
^
Fuzzy.cpp: In member function 'virtual double aevol::Fuzzy::get_geometric_area(double, double) const':
Fuzzy.cpp:82:30: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
^
Fuzzy.cpp:82:30: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
^
Fuzzy.cpp:276:41: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::const_iterator {aka std::_List_const_iterator<aevol::Point>}' changed in GCC 7.1
return first_part + get_geometric_area(begin, end) + last_part;
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
Fuzzy.cpp: In member function 'std::__cxx11::list<aevol::Point>::iterator aevol::Fuzzy::create_interpolated_point(double, std::__cxx11::list<aevol::Point>::iterator)':
Fuzzy.cpp:382:23: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator {aka std::_List_iterator<aevol::Point>}' changed in GCC 7.1
list<Point>::iterator Fuzzy::create_interpolated_point(double x, std::list<Point>::iterator start) {
^~~~~
Fuzzy.cpp:382:23: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator {aka std::_List_iterator<aevol::Point>}' changed in GCC 7.1
Fuzzy.cpp:82:30: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
^
Fuzzy.cpp: In member function 'std::__cxx11::list<aevol::Point>::iterator aevol::Fuzzy::create_interpolated_point(double)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp: In member function 'virtual void aevol::Fuzzy::add(const aevol::AbstractFuzzy&)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp:82:30: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
^
Fuzzy.cpp: In member function 'virtual void aevol::Fuzzy::sub(const aevol::AbstractFuzzy&)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp:82:30: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Point>' changed in GCC 7.1
return y(x, points_.begin());
^
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ParamLoader.o ParamLoader.cpp
Fuzzy.cpp: In function 'virtual void aevol::Fuzzy::add_triangle(double, double, double)':
Fuzzy.cpp:374:54: note: parameter passing for argument of type 'std::_List_iterator<aevol::Point>' changed in GCC 7.1
return create_interpolated_point(x, points_.begin());
^
Fuzzy.cpp:179:6: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator {aka std::_List_iterator<aevol::Point>}' changed in GCC 7.1
p1 = create_interpolated_point(mean, p0);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Fuzzy.cpp:180:24: note: parameter passing for argument of type 'std::__cxx11::list<aevol::Point>::iterator {aka std::_List_iterator<aevol::Point>}' changed in GCC 7.1
if (x2 <= X_MAX) p2 = create_interpolated_point(x2, p1);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ParameterLine.o ParameterLine.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o AeTime.o AeTime.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o World.o World.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o HabitatFactory.o HabitatFactory.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Individual_X11.o Individual_X11.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpManager_X11.o ExpManager_X11.cpp
In file included from /usr/include/c++/7/list:64:0,
from ParamLoader.cpp:38:
/usr/include/c++/7/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Gaussian>; _Tp = aevol::Gaussian; _Alloc = std::allocator<aevol::Gaussian>]':
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o X11Window.o X11Window.cpp
/usr/include/c++/7/bits/list.tcc: In member function 'void aevol::ParamLoader::load(aevol::ExpManager*, bool, char*, int32_t, char*, int32_t)':
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rm -f libaevol.a
ar cru libaevol.a Alignment.o Codon.o Dna.o Dump.o ExpManager.o ExpSetup.o GeneticUnit.o GridCell.o Individual.o IndividualFactory.o Logging.o Mutation.o PointMutation.o SmallInsertion.o SmallDeletion.o Duplication.o Deletion.o Translocation.o Inversion.o InsertionHT.o ReplacementHT.o Observable.o OutputManager.o MutationParams.o PhenotypicTarget.o PhenotypicTargetHandler.o Point.o Protein.o JumpingMT.o ReplicationReport.o DnaReplicationReport.o Rna.o Stats.o StatRecord.o ae_string.o Tree.o Utils.o VisAVis.o Selection.o AbstractFuzzy.o HybridFuzzy.o FuzzyFactory.o Fuzzy.o Habitat.o ParamLoader.o ParameterLine.o AeTime.o World.o HabitatFactory.o Individual_X11.o ExpManager_X11.o X11Window.o
ar: `u' modifier ignored since `D' is the default (see `U')
ranlib libaevol.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
Making all in post_treatments
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ancestor_stats.o ancestor_stats.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ancestor_robustness.o ancestor_robustness.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o IndivAnalysis.o IndivAnalysis.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o create_eps.o create_eps.cpp
ancestor_robustness.cpp:48:33: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
static char* output_file_name = "robustness_summary.txt";
^~~~~~~~~~~~~~~~~~~~~~~~
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract.o extract.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o lineage.o lineage.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mutagenesis.o mutagenesis.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o robustness.o robustness.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o view.o view.cpp
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_ancestor_stats ancestor_stats.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_ancestor_robustness ancestor_robustness.o IndivAnalysis.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_create_eps create_eps.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_extract extract.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_lineage lineage.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_mutagenesis mutagenesis.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_robustness robustness.o IndivAnalysis.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L../../src/libaevol -Wl,-z,relro -Wl,-z,now -o aevol_misc_view view.o ../../src/libaevol/libaevol.a ../../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_run.o aevol_run.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_create.o aevol_create.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_modify.o aevol_modify.cpp
g++ -DPACKAGE_NAME=\"AEVOL\" -DPACKAGE_TARNAME=\"aevol\" -DPACKAGE_VERSION=\"5.0\" -DPACKAGE_STRING=\"AEVOL\ 5.0\" -DPACKAGE_BUGREPORT=\"aevol-bugs@lists.gforge.inria.fr\" -DPACKAGE_URL=\"www.aevol.fr\" -DPACKAGE=\"aevol\" -DVERSION=\"5.0\" -DHAVE_CXX14=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_LIBM=1 -DHAVE_LIBZ=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_FLOOR=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_GZREAD=1 -D__X11=1 -DHAVE_LIBX11=1 -DHAVE_X11_XLIB_H=1 -DHAVE_X11_XUTIL_H=1 -DHAVE_X11_KEYSYM_H=1 -DHAVE_X11_XATOM_H=1 -DHAVE_X11_CURSORFONT_H=1 -DSFMT_MEXP=607 -DNDEBUG=1 -I. -I../src/libaevol -D__STDC_FORMAT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -D_FORTIFY_SOURCE=2 -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aevol_propagate-aevol_propagate.o `test -f 'aevol_propagate.cpp' || echo './'`aevol_propagate.cpp
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o aevol_run aevol_run.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o aevol_create aevol_create.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
In file included from /usr/include/c++/7/list:64:0,
from aevol_modify.cpp:38:
/usr/include/c++/7/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<aevol::Gaussian>; _Tp = aevol::Gaussian; _Alloc = std::allocator<aevol::Gaussian>]':
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
/usr/include/c++/7/bits/list.tcc: In function 'int main(int, char**)':
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<aevol::Gaussian>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o aevol_modify aevol_modify.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lX11 -lz -lm
g++ -fopenmp -O3 -ffast-math -pipe -fexpensive-optimizations -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -L/usr/lib/arm-linux-gnueabihf -Wl,-z,relro -Wl,-z,now -o aevol_propagate aevol_propagate-aevol_propagate.o ../src/libaevol/libaevol.a ../src/libaevol/SFMT-src-1.4/libsfmt.a -lboost_system -lboost_filesystem -lX11 -lz -lm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making all in doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Nothing to be done for 'all-am'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 check VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making check in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
Making check in libaevol
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
Making check in SFMT-src-1.4
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[4]: Nothing to be done for 'check'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
Making check in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
make[4]: Nothing to be done for 'check-am'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
Making check in post_treatments
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Nothing to be done for 'check'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making check in doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[2]: Nothing to be done for 'check'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Nothing to be done for 'check-am'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/aevol AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making install in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
Making install in libaevol
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
Making install in SFMT-src-1.4
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol/SFMT-src-1.4'
Making install in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/libaevol'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/libaevol'
Making install in post_treatments
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
/usr/bin/install -c aevol_misc_ancestor_stats aevol_misc_ancestor_robustness aevol_misc_create_eps aevol_misc_extract aevol_misc_lineage aevol_misc_mutagenesis aevol_misc_robustness aevol_misc_view '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/post_treatments'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
/usr/bin/install -c aevol_run aevol_create aevol_modify aevol_propagate '/<<PKGBUILDDIR>>/debian/aevol/usr/bin'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making install in doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/aevol/usr/share/man/man1'
/usr/bin/install -c -m 644 aevol_create.1 aevol_run.1 aevol_modify.1 aevol_propagate.1 aevol_misc_lineage.1 aevol_misc_ancestor_stats.1 aevol_misc_robustness.1 aevol_misc_compute_pop_stats.1 aevol_misc_view.1 aevol_misc_create_eps.1 aevol_misc_extract.1 aevol_misc_gene_families.1 '/<<PKGBUILDDIR>>/debian/aevol/usr/share/man/man1'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_extract contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_view contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_run contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_modify contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_ancestor_robustness contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_propagate contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_mutagenesis contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_create_eps contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_robustness contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_lineage contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_create contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/aevol/usr/bin/aevol_misc_ancestor_stats contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/aevol/usr/bin/aevol_misc_extract debian/aevol/usr/bin/aevol_misc_view debian/aevol/usr/bin/aevol_run debian/aevol/usr/bin/aevol_modify debian/aevol/usr/bin/aevol_misc_ancestor_robustness debian/aevol/usr/bin/aevol_propagate debian/aevol/usr/bin/aevol_misc_mutagenesis debian/aevol/usr/bin/aevol_misc_create_eps debian/aevol/usr/bin/aevol_misc_robustness debian/aevol/usr/bin/aevol_misc_lineage debian/aevol/usr/bin/aevol_create debian/aevol/usr/bin/aevol_misc_ancestor_stats were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'aevol' in '../aevol_5.0-1_armhf.deb'.
dpkg-deb: building package 'aevol-dbgsym' in '../aevol-dbgsym_5.0-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../aevol_5.0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build aevol-5.0
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-09-17T05:24:45Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
aevol_5.0-1_armhf.changes:
--------------------------
Format: 1.8
Date: Mon, 11 Sep 2017 20:47:37 +0200
Source: aevol
Binary: aevol
Architecture: armhf
Version: 5.0-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
aevol - digital genetics model to run Evolution Experiments in silico
Changes:
aevol (5.0-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
* Moved packaging from SVN to Git
* Fixed watch file
* debhelper 10
* Standards-Version: 4.1.0 (no changes needed)
* Add missing libboost Build-Depends
* hardening=+all
* Unique license name
Checksums-Sha1:
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fa914456660ce4863711004fa6ae40d4f06f2a06 5048 aevol_5.0-1_armhf.buildinfo
acc1ff27f99abe0496be01e2cec85d472722d581 362678 aevol_5.0-1_armhf.deb
Checksums-Sha256:
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79eee4ae9911ca4f50feceaa2e1ce849390e4201d18b46caafd0da2d75f25e2f 5048 aevol_5.0-1_armhf.buildinfo
b5d41311e27b2019add3283823621a7b844d7ae541eeb67c41e5688205669d4f 362678 aevol_5.0-1_armhf.deb
Files:
b374f3e909fc7c75fb357f7420045cbb 19529164 debug optional aevol-dbgsym_5.0-1_armhf.deb
42e9790116f8b2b62eb29b2c028dcfcc 5048 science optional aevol_5.0-1_armhf.buildinfo
1f0973355315a97595845b05be98f686 362678 science optional aevol_5.0-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
aevol-dbgsym_5.0-1_armhf.deb
----------------------------
new debian package, version 2.0.
size 19529164 bytes: control archive=1051 bytes.
811 bytes, 12 lines control
1272 bytes, 12 lines md5sums
Package: aevol-dbgsym
Source: aevol
Version: 5.0-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 20460
Depends: aevol (= 5.0-1)
Section: debug
Priority: optional
Description: debug symbols for aevol
Build-Ids: 0ec8620de599a16e94568719edbe19cd9212f9a9 105bd51a21838b45a4ec3ad106c55d979ff7434d 238f991fa757667456303300de0f7ab1aea6d7c3 2893630e0c924708e44ff3e749e45abb45e9c84e 5167db8da7ae0ced03f82a9744ea88a82a39e4b2 6b6aaff7e19080b5e205cf79016c9d5e6d5dfd56 7f6eab1652dec97d0d7d7b4f1483ed56a89a9a92 b8ea56402436204ea8e0a30efa37dc89c6bf8652 bda130d1c471e121799276ce6bd25f954bdc74aa cc7e2f2498424c9850e8130ec6fc70b0e0a9bdb8 cdd7f55c298236bf604c509e53dced83660d7bf6 ed499132e423b7601c00725a2b8b863e932028df
drwxr-xr-x root/root 0 2017-09-11 18:47 ./
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/0e/
-rw-r--r-- root/root 1748852 2017-09-11 18:47 ./usr/lib/debug/.build-id/0e/c8620de599a16e94568719edbe19cd9212f9a9.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/10/
-rw-r--r-- root/root 1718340 2017-09-11 18:47 ./usr/lib/debug/.build-id/10/5bd51a21838b45a4ec3ad106c55d979ff7434d.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/23/
-rw-r--r-- root/root 1742492 2017-09-11 18:47 ./usr/lib/debug/.build-id/23/8f991fa757667456303300de0f7ab1aea6d7c3.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/28/
-rw-r--r-- root/root 1741016 2017-09-11 18:47 ./usr/lib/debug/.build-id/28/93630e0c924708e44ff3e749e45abb45e9c84e.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/51/
-rw-r--r-- root/root 1738036 2017-09-11 18:47 ./usr/lib/debug/.build-id/51/67db8da7ae0ced03f82a9744ea88a82a39e4b2.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/6b/
-rw-r--r-- root/root 1734912 2017-09-11 18:47 ./usr/lib/debug/.build-id/6b/6aaff7e19080b5e205cf79016c9d5e6d5dfd56.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/7f/
-rw-r--r-- root/root 1689148 2017-09-11 18:47 ./usr/lib/debug/.build-id/7f/6eab1652dec97d0d7d7b4f1483ed56a89a9a92.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/b8/
-rw-r--r-- root/root 1767108 2017-09-11 18:47 ./usr/lib/debug/.build-id/b8/ea56402436204ea8e0a30efa37dc89c6bf8652.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/bd/
-rw-r--r-- root/root 1719520 2017-09-11 18:47 ./usr/lib/debug/.build-id/bd/a130d1c471e121799276ce6bd25f954bdc74aa.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/cc/
-rw-r--r-- root/root 1730132 2017-09-11 18:47 ./usr/lib/debug/.build-id/cc/7e2f2498424c9850e8130ec6fc70b0e0a9bdb8.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/cd/
-rw-r--r-- root/root 1791736 2017-09-11 18:47 ./usr/lib/debug/.build-id/cd/d7f55c298236bf604c509e53dced83660d7bf6.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/lib/debug/.build-id/ed/
-rw-r--r-- root/root 1801600 2017-09-11 18:47 ./usr/lib/debug/.build-id/ed/499132e423b7601c00725a2b8b863e932028df.debug
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-09-11 18:47 ./usr/share/doc/aevol-dbgsym -> aevol
aevol_5.0-1_armhf.deb
---------------------
new debian package, version 2.0.
size 362678 bytes: control archive=1862 bytes.
1355 bytes, 26 lines control
2236 bytes, 32 lines md5sums
Package: aevol
Version: 5.0-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 3671
Depends: libboost-filesystem1.62.0, libboost-system1.62.0, libc6 (>= 2.15), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), libx11-6, zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: http://www.aevol.fr/
Description: digital genetics model to run Evolution Experiments in silico
Aevol is a digital genetics model: populations of digital organisms are
subjected to a process of selection and variation, which creates a
Darwinian dynamics.
.
By modifying the characteristics of selection (e.g. population size,
type of environment, environmental variations) or variation (e.g.
mutation rates, chromosomal rearrangement rates, types of
rearrangements, horizontal transfer), one can study experimentally the
impact of these parameters on the structure of the evolved organisms.
In particular, since Aevol integrates a precise and realistic model of
the genome, it allows for the study of structural variations of the
genome (e.g. number of genes, synteny, proportion of coding sequences).
.
The simulation platform comes along with a set of tools for analysing
phylogenies and measuring many characteristics of the organisms and
populations along evolution.
drwxr-xr-x root/root 0 2017-09-11 18:47 ./
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/bin/
-rwxr-xr-x root/root 296560 2017-09-11 18:47 ./usr/bin/aevol_create
-rwxr-xr-x root/root 304812 2017-09-11 18:47 ./usr/bin/aevol_misc_ancestor_robustness
-rwxr-xr-x root/root 308844 2017-09-11 18:47 ./usr/bin/aevol_misc_ancestor_stats
-rwxr-xr-x root/root 312956 2017-09-11 18:47 ./usr/bin/aevol_misc_create_eps
-rwxr-xr-x root/root 304788 2017-09-11 18:47 ./usr/bin/aevol_misc_extract
-rwxr-xr-x root/root 300716 2017-09-11 18:47 ./usr/bin/aevol_misc_lineage
-rwxr-xr-x root/root 312984 2017-09-11 18:47 ./usr/bin/aevol_misc_mutagenesis
-rwxr-xr-x root/root 304784 2017-09-11 18:47 ./usr/bin/aevol_misc_robustness
-rwxr-xr-x root/root 312916 2017-09-11 18:47 ./usr/bin/aevol_misc_view
-rwxr-xr-x root/root 325224 2017-09-11 18:47 ./usr/bin/aevol_modify
-rwxr-xr-x root/root 317064 2017-09-11 18:47 ./usr/bin/aevol_propagate
-rwxr-xr-x root/root 313032 2017-09-11 18:47 ./usr/bin/aevol_run
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/doc/aevol/
-rw-r--r-- root/root 6502 2016-06-07 13:03 ./usr/share/doc/aevol/NEWS.gz
-rw-r--r-- root/root 2249 2016-06-23 14:42 ./usr/share/doc/aevol/README
-rw-r--r-- root/root 441 2017-09-11 18:47 ./usr/share/doc/aevol/changelog.Debian.gz
-rw-r--r-- root/root 21 2014-10-20 11:07 ./usr/share/doc/aevol/changelog.gz
-rw-r--r-- root/root 1618 2017-09-11 18:47 ./usr/share/doc/aevol/copyright
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/man/
drwxr-xr-x root/root 0 2017-09-11 18:47 ./usr/share/man/man1/
-rw-r--r-- root/root 622 2017-09-11 18:47 ./usr/share/man/man1/aevol_create.1.gz
-rw-r--r-- root/root 566 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_ancestor_stats.1.gz
-rw-r--r-- root/root 526 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_ancstats.1.gz
-rw-r--r-- root/root 691 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_compute_pop_stats.1.gz
-rw-r--r-- root/root 567 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_create_eps.1.gz
-rw-r--r-- root/root 732 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_extract.1.gz
-rw-r--r-- root/root 541 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_fixed_mutations.1.gz
-rw-r--r-- root/root 540 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_gene_families.1.gz
-rw-r--r-- root/root 633 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_lineage.1.gz
-rw-r--r-- root/root 955 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_robustness.1.gz
-rw-r--r-- root/root 505 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_view.1.gz
-rw-r--r-- root/root 508 2017-09-11 18:47 ./usr/share/man/man1/aevol_misc_view_generation.1.gz
-rw-r--r-- root/root 506 2017-09-11 18:47 ./usr/share/man/man1/aevol_modify.1.gz
-rw-r--r-- root/root 1133 2017-09-11 18:47 ./usr/share/man/man1/aevol_propagate.1.gz
-rw-r--r-- root/root 643 2017-09-11 18:47 ./usr/share/man/man1/aevol_run.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 126916
Build-Time: 138
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 216
Job: aevol_5.0-1
Machine Architecture: armhf
Package: aevol
Package-Time: 371
Source-Version: 5.0-1
Space: 126916
Status: successful
Version: 5.0-1
--------------------------------------------------------------------------------
Finished at 2017-09-17T05:24:45Z
Build needed 00:06:11, 126916k disk space