tnseq-transit →
3.3.3-1 →
armhf → 2023-12-02 05:41:23
sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023
+==============================================================================+
| tnseq-transit 3.3.3-1 (armhf) Sat, 02 Dec 2023 05:35:01 +0000 |
+==============================================================================+
Package: tnseq-transit
Version: 3.3.3-1
Source Version: 3.3.3-1
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-037b3174-1839-4681-bcd1-7a738c301ffd' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/tnseq-transit-PgqFBA/resolver-0sUfWn' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.3 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [15.0 MB]
Fetched 29.3 MB in 5s (5374 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'tnseq-transit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/tnseq-transit.git
Please use:
git clone https://salsa.debian.org/med-team/tnseq-transit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 41.0 MB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main tnseq-transit 3.3.3-1 (dsc) [2380 B]
Get:2 http://172.17.4.1/private trixie-staging/main tnseq-transit 3.3.3-1 (tar) [41.0 MB]
Get:3 http://172.17.4.1/private trixie-staging/main tnseq-transit 3.3.3-1 (diff) [6864 B]
Fetched 41.0 MB in 5s (8685 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/tnseq-transit-PgqFBA/tnseq-transit-3.3.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/tnseq-transit-PgqFBA' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-dev, python3-setuptools, python3-numpy, python3-scipy, python3-pil, python3-matplotlib, python3-sklearn, python3-statsmodels, python3-pubsub, bwa, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-dev, python3-setuptools, python3-numpy, python3-scipy, python3-pil, python3-matplotlib, python3-sklearn, python3-statsmodels, python3-pubsub, bwa, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [804 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [825 B]
Fetched 2238 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev blt bsdextrautils bsdutils bwa
debhelper dh-autoreconf dh-python dh-strip-nondeterminism dpkg-dev dwz file
fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libblas3
libblkid1 libbrotli1 libbsd0 libdebhelper-perl libdeflate0 libdpkg-perl
libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0
libgraphite2-3 libharfbuzz0b libicu72 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libmagic-mgc
libmagic1 libmount1 libopenjp2-7 libpipeline1 libpng16-16 libproc2-0
libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev
libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0 libraqm0
libsharpyuv0 libsmartcols1 libsub-override-perl libtcl8.6 libtiff6 libtk8.6
libtool libuchardet0 libuuid1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6
libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1
libxslt1.1 libxss1 m4 mailcap man-db media-types mime-support mount
po-debconf procps python-matplotlib-data python3 python3-appdirs
python3-attr python3-brotli python3-contourpy python3-cycler
python3-dateutil python3-decorator python3-dev python3-distutils
python3-fonttools python3-fs python3-joblib python3-kiwisolver
python3-lib2to3 python3-lxml python3-lz4 python3-matplotlib python3-minimal
python3-mpmath python3-numpy python3-packaging python3-pandas
python3-pandas-lib python3-patsy python3-pil python3-pil.imagetk
python3-pkg-resources python3-pubsub python3-pyparsing python3-scipy
python3-setuptools python3-six python3-sklearn python3-sklearn-lib
python3-statsmodels python3-statsmodels-lib python3-sympy
python3-threadpoolctl python3-tk python3-tz python3-ufolib2
python3-unicodedata2 python3.11 python3.11-dev python3.11-minimal
sensible-utils tk8.6-blt2.5 unicode-data util-linux x11-common zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc blt-demo samtools dh-make flit
python3-build python3-installer python3-wheel debian-keyring gettext-doc
libasprintf-dev libgettextpo-dev groff git bzr low-memory-monitor
libjs-jquery-ui-docs liblcms2-utils cryptsetup-bin tcl8.6 tk8.6 libtool-doc
gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
nfs-common libmail-box-perl python3-doc python3-venv python-attr-doc
python-cycler-doc python-lxml-doc cm-super-minimal dvipng ffmpeg
fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common
python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5
python3-sip python3-tornado texlive-extra-utils texlive-latex-extra
python-mpmath-doc python3-gmpy2 gfortran python3-pytest python-pandas-doc
python-patsy-doc python-pil-doc python-pyparsing-doc python-scipy-doc
python-setuptools-doc python3-dap python-sklearn-doc python-statsmodels-doc
texlive-fonts-extra python-sympy-doc tix python3-tk-dbg python3.11-venv
python3.11-doc binfmt-support dosfstools kbd util-linux-extra
util-linux-locales
Recommended packages:
libalgorithm-merge-perl curl | wget | lynx libfile-fcntllock-perl
libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs
javascript-common libltdl-dev uuid-runtime libmail-sendmail-perl psmisc
python3-pytest python3-simplejson python3-psutil python3-bs4
python3-html5lib python3-bottleneck python3-numexpr python3-odf
python3-openpyxl python3-tables python3-jinja2 python3-olefile python3-nose
python3-colorama python3-cvxopt isympy-common ca-certificates
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev blt bsdextrautils bwa debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config
fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libblas3 libbrotli1 libbsd0
libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu72
libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui
libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4
libmagic-mgc libmagic1 libopenjp2-7 libpipeline1 libpng16-16 libproc2-0
libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev
libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0 libraqm0
libsharpyuv0 libsub-override-perl libtcl8.6 libtiff6 libtk8.6 libtool
libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6
libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 m4
mailcap man-db media-types mime-support po-debconf procps
python-matplotlib-data python3 python3-appdirs python3-attr python3-brotli
python3-contourpy python3-cycler python3-dateutil python3-decorator
python3-dev python3-distutils python3-fonttools python3-fs python3-joblib
python3-kiwisolver python3-lib2to3 python3-lxml python3-lz4
python3-matplotlib python3-minimal python3-mpmath python3-numpy
python3-packaging python3-pandas python3-pandas-lib python3-patsy
python3-pil python3-pil.imagetk python3-pkg-resources python3-pubsub
python3-pyparsing python3-scipy python3-setuptools python3-six
python3-sklearn python3-sklearn-lib python3-statsmodels
python3-statsmodels-lib python3-sympy python3-threadpoolctl python3-tk
python3-tz python3-ufolib2 python3-unicodedata2 python3.11 python3.11-dev
python3.11-minimal sbuild-build-depends-main-dummy sensible-utils
tk8.6-blt2.5 unicode-data x11-common zlib1g-dev
The following packages will be upgraded:
bsdutils dpkg-dev libblkid1 libdpkg-perl libmount1 libsmartcols1 libuuid1
mount util-linux
9 upgraded, 145 newly installed, 0 to remove and 40 not upgraded.
1 not fully installed or removed.
Need to get 110 MB/112 MB of archives.
After this operation, 464 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf mount armhf 2.39.2-6 [134 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf bsdutils armhf 1:2.39.2-6 [86.5 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf util-linux armhf 2.39.2-6 [1110 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.6-3 [800 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.6-3 [1674 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf mailcap all 3.70+nmu1 [32.0 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf libuuid1 armhf 2.39.2-6 [28.1 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.6-3 [1679 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.6-3 [586 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:16 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf libblkid1 armhf 2.39.2-6 [145 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libmount1 armhf 2.39.2-6 [167 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf libsmartcols1 armhf 2.39.2-6 [102 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.2-6 [81.2 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.12.0-1 [1358 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf libproc2-0 armhf 2:4.0.4-2 [54.9 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf procps armhf 2:4.0.4-2 [848 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf sensible-utils all 0.0.20 [19.3 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-13 [156 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-13 [496 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [904 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.1.0-2 [280 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf libpng16-16 armhf 1.6.40-2 [258 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [366 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf fontconfig-config armhf 2.14.2-6 [316 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf libfontconfig1 armhf 2.14.2-6 [367 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf libbsd0 armhf 0.11.7-4 [111 kB]
Get:47 http://172.17.4.1/private trixie-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf libx11-data all 2:1.8.7-1 [328 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf libx11-6 armhf 2:1.8.7-1 [729 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf libtk8.6 armhf 8.6.13-2 [680 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4.1 [477 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf blt armhf 2.5.3+dfsg-4.1 [14.9 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf bwa armhf 0.7.17-7 [196 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.8 [82.1 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:65 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:67 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-4 [9009 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-13 [1201 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.8 [956 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf python3-distutils all 3.11.5-1 [131 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf python3-pkg-resources all 68.1.2-2 [241 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf python3-setuptools all 68.1.2-2 [468 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf dh-python all 6.20231107 [107 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf fonts-lyx all 2.3.7-1 [186 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf libexpat1-dev armhf 2.5.0-2 [130 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 13.2.0-5+rpi1 [247 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.78.1-4 [1257 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.0.1-1 [2098 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libimagequant0 armhf 2.18.0-1 [30.5 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf libjs-sphinxdoc all 7.2.6-2 [149 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1 [24.4 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf liblcms2-2 armhf 2.14-2 [124 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-3 [133 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf libopenjp2-7 armhf 2.5.0-2 [164 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf libpython3.11 armhf 3.11.6-3 [1662 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-dev armhf 3.11.6-3 [3271 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf libpython3-dev armhf 3.11.4-5 [9432 B]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libqhull-r8.0 armhf 2020.2-6 [216 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libraqm0 armhf 0.10.1-1 [11.7 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf libsharpyuv0 armhf 1.3.2-0.3 [106 kB]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.3.2-0.3 [261 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-1 [298 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf libwebpdemux2 armhf 1.3.2-0.3 [106 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf libwebpmux3 armhf 1.3.2-0.3 [116 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf python3-appdirs all 1.4.4-4 [12.5 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf python3-attr all 23.1.0-2 [67.1 kB]
Get:116 http://172.17.4.1/private trixie-staging/main armhf python3-brotli armhf 1.1.0-2 [290 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf python3-numpy armhf 1:1.24.2-1 [3826 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf python3-contourpy armhf 1.0.7-1 [141 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:120 http://172.17.4.1/private trixie-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf python3-dateutil all 2.8.2-3 [78.4 kB]
Get:122 http://172.17.4.1/private trixie-staging/main armhf python3-decorator all 5.1.1-5 [15.1 kB]
Get:123 http://172.17.4.1/private trixie-staging/main armhf python3.11-dev armhf 3.11.6-3 [508 kB]
Get:124 http://172.17.4.1/private trixie-staging/main armhf python3-dev armhf 3.11.4-5 [26.2 kB]
Get:125 http://172.17.4.1/private trixie-staging/main armhf python3-scipy armhf 1.10.1-5+rpi1 [13.6 MB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf python3-sympy all 1.12-6 [3868 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf python3-tz all 2023.3.post1-1 [30.8 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf python3-fs all 2.4.16-2 [95.2 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf python3-lxml armhf 4.9.3-1 [1039 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b1 [23.9 kB]
Get:133 http://172.17.4.1/private trixie-staging/main armhf python3-unicodedata2 armhf 15.1.0+ds-1 [296 kB]
Get:134 http://172.17.4.1/private trixie-staging/main armhf unicode-data all 15.1.0-1 [8547 kB]
Get:135 http://172.17.4.1/private trixie-staging/main armhf python3-fonttools armhf 4.38.0-1 [1047 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf python3-joblib all 1.3.2-1 [217 kB]
Get:137 http://172.17.4.1/private trixie-staging/main armhf python3-kiwisolver armhf 1.4.4-1 [52.3 kB]
Get:138 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.0.0-1 [437 kB]
Get:139 http://172.17.4.1/private trixie-staging/main armhf python3-tk armhf 3.11.5-1 [95.9 kB]
Get:140 http://172.17.4.1/private trixie-staging/main armhf python3-pil.imagetk armhf 10.0.0-1 [75.2 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf python3-pyparsing all 3.1.1-1 [145 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf python3-packaging all 23.2-1 [44.8 kB]
Get:143 http://172.17.4.1/private trixie-staging/main armhf python3-matplotlib armhf 3.6.3-1 [7453 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf python3-pandas-lib armhf 1.5.3+dfsg-6 [3000 kB]
Get:145 http://172.17.4.1/private trixie-staging/main armhf python3-pandas all 1.5.3+dfsg-6 [2886 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf python3-patsy all 0.5.3-1 [173 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf python3-pubsub all 4.0.3-7 [46.7 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf python3-threadpoolctl all 3.1.0-1 [21.2 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf python3-sklearn-lib armhf 1.2.1+dfsg-1 [2061 kB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf python3-sklearn all 1.2.1+dfsg-1 [2103 kB]
Get:151 http://172.17.4.1/private trixie-staging/main armhf python3-statsmodels-lib armhf 0.14.0+dfsg-5+rpi1 [1110 kB]
Get:152 http://172.17.4.1/private trixie-staging/main armhf python3-statsmodels all 0.14.0+dfsg-5+rpi1 [4816 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 110 MB in 13s (8768 kB/s)
(Reading database ... 12577 files and directories currently installed.)
Preparing to unpack .../mount_2.39.2-6_armhf.deb ...
Unpacking mount (2.39.2-6) over (2.39.2-5) ...
Preparing to unpack .../bsdutils_1%3a2.39.2-6_armhf.deb ...
Unpacking bsdutils (1:2.39.2-6) over (1:2.39.2-5) ...
Setting up bsdutils (1:2.39.2-6) ...
(Reading database ... 12577 files and directories currently installed.)
Preparing to unpack .../util-linux_2.39.2-6_armhf.deb ...
Unpacking util-linux (2.39.2-6) over (2.39.2-5) ...
Setting up util-linux (2.39.2-6) ...
Selecting previously unselected package libpython3.11-minimal:armhf.
(Reading database ... 12577 files and directories currently installed.)
Preparing to unpack .../libpython3.11-minimal_3.11.6-3_armhf.deb ...
Unpacking libpython3.11-minimal:armhf (3.11.6-3) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.5.0-2_armhf.deb ...
Unpacking libexpat1:armhf (2.5.0-2) ...
Selecting previously unselected package python3.11-minimal.
Preparing to unpack .../python3.11-minimal_3.11.6-3_armhf.deb ...
Unpacking python3.11-minimal (3.11.6-3) ...
Setting up libpython3.11-minimal:armhf (3.11.6-3) ...
Setting up libexpat1:armhf (2.5.0-2) ...
Setting up python3.11-minimal (3.11.6-3) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 12893 files and directories currently installed.)
Preparing to unpack .../python3-minimal_3.11.4-5_armhf.deb ...
Unpacking python3-minimal (3.11.4-5) ...
Selecting previously unselected package media-types.
Preparing to unpack .../media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package mailcap.
Preparing to unpack .../mailcap_3.70+nmu1_all.deb ...
Unpacking mailcap (3.70+nmu1) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../mime-support_3.66_all.deb ...
Unpacking mime-support (3.66) ...
Preparing to unpack .../libuuid1_2.39.2-6_armhf.deb ...
Unpacking libuuid1:armhf (2.39.2-6) over (2.39.2-5) ...
Setting up libuuid1:armhf (2.39.2-6) ...
Selecting previously unselected package libpython3.11-stdlib:armhf.
(Reading database ... 12945 files and directories currently installed.)
Preparing to unpack .../libpython3.11-stdlib_3.11.6-3_armhf.deb ...
Unpacking libpython3.11-stdlib:armhf (3.11.6-3) ...
Selecting previously unselected package python3.11.
Preparing to unpack .../python3.11_3.11.6-3_armhf.deb ...
Unpacking python3.11 (3.11.6-3) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../libpython3-stdlib_3.11.4-5_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.11.4-5) ...
Setting up python3-minimal (3.11.4-5) ...
Selecting previously unselected package python3.
(Reading database ... 13333 files and directories currently installed.)
Preparing to unpack .../python3_3.11.4-5_armhf.deb ...
Unpacking python3 (3.11.4-5) ...
Preparing to unpack .../libblkid1_2.39.2-6_armhf.deb ...
Unpacking libblkid1:armhf (2.39.2-6) over (2.39.2-5) ...
Setting up libblkid1:armhf (2.39.2-6) ...
(Reading database ... 13354 files and directories currently installed.)
Preparing to unpack .../libmount1_2.39.2-6_armhf.deb ...
Unpacking libmount1:armhf (2.39.2-6) over (2.39.2-5) ...
Setting up libmount1:armhf (2.39.2-6) ...
(Reading database ... 13354 files and directories currently installed.)
Preparing to unpack .../libsmartcols1_2.39.2-6_armhf.deb ...
Unpacking libsmartcols1:armhf (2.39.2-6) over (2.39.2-5) ...
Setting up libsmartcols1:armhf (2.39.2-6) ...
Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 13354 files and directories currently installed.)
Preparing to unpack .../000-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../001-groff-base_1.23.0-3_armhf.deb ...
Unpacking groff-base (1.23.0-3) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../002-bsdextrautils_2.39.2-6_armhf.deb ...
Unpacking bsdextrautils (2.39.2-6) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../003-libpipeline1_1.5.7-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../004-man-db_2.12.0-1_armhf.deb ...
Unpacking man-db (2.12.0-1) ...
Selecting previously unselected package libproc2-0:armhf.
Preparing to unpack .../005-libproc2-0_2%3a4.0.4-2_armhf.deb ...
Unpacking libproc2-0:armhf (2:4.0.4-2) ...
Selecting previously unselected package procps.
Preparing to unpack .../006-procps_2%3a4.0.4-2_armhf.deb ...
Unpacking procps (2:4.0.4-2) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../007-sensible-utils_0.0.20_all.deb ...
Unpacking sensible-utils (0.0.20) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../008-libmagic-mgc_1%3a5.45-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.45-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../009-libmagic1_1%3a5.45-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.45-2) ...
Selecting previously unselected package file.
Preparing to unpack .../010-file_1%3a5.45-2_armhf.deb ...
Unpacking file (1:5.45-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../011-gettext-base_0.21-13_armhf.deb ...
Unpacking gettext-base (0.21-13) ...
Selecting previously unselected package m4.
Preparing to unpack .../012-m4_1.4.19-4_armhf.deb ...
Unpacking m4 (1.4.19-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../013-autoconf_2.71-3_all.deb ...
Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../015-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../016-autopoint_0.21-13_all.deb ...
Unpacking autopoint (0.21-13) ...
Selecting previously unselected package libtcl8.6:armhf.
Preparing to unpack .../017-libtcl8.6_8.6.13+dfsg-2_armhf.deb ...
Unpacking libtcl8.6:armhf (8.6.13+dfsg-2) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../018-libbrotli1_1.1.0-2_armhf.deb ...
Unpacking libbrotli1:armhf (1.1.0-2) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../019-libpng16-16_1.6.40-2_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.40-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../020-libfreetype6_2.13.2+dfsg-1_armhf.deb ...
Unpacking libfreetype6:armhf (2.13.2+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-mono.
Preparing to unpack .../021-fonts-dejavu-mono_2.37-8_all.deb ...
Unpacking fonts-dejavu-mono (2.37-8) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../022-fonts-dejavu-core_2.37-8_all.deb ...
Unpacking fonts-dejavu-core (2.37-8) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../023-fontconfig-config_2.14.2-6_armhf.deb ...
Unpacking fontconfig-config (2.14.2-6) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../024-libfontconfig1_2.14.2-6_armhf.deb ...
Unpacking libfontconfig1:armhf (2.14.2-6) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../025-libxau6_1%3a1.0.9-1_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.9-1) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../026-libbsd0_0.11.7-4_armhf.deb ...
Unpacking libbsd0:armhf (0.11.7-4) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../027-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../028-libxcb1_1.15-1_armhf.deb ...
Unpacking libxcb1:armhf (1.15-1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../029-libx11-data_2%3a1.8.7-1_all.deb ...
Unpacking libx11-data (2:1.8.7-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../030-libx11-6_2%3a1.8.7-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.8.7-1) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../031-libxrender1_1%3a0.9.10-1.1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1.1) ...
Selecting previously unselected package libxft2:armhf.
Preparing to unpack .../032-libxft2_2.3.6-1_armhf.deb ...
Unpacking libxft2:armhf (2.3.6-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../033-libxext6_2%3a1.3.4-1_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.4-1) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../034-x11-common_1%3a7.7+23_all.deb ...
Unpacking x11-common (1:7.7+23) ...
Selecting previously unselected package libxss1:armhf.
Preparing to unpack .../035-libxss1_1%3a1.2.3-1_armhf.deb ...
Unpacking libxss1:armhf (1:1.2.3-1) ...
Selecting previously unselected package libtk8.6:armhf.
Preparing to unpack .../036-libtk8.6_8.6.13-2_armhf.deb ...
Unpacking libtk8.6:armhf (8.6.13-2) ...
Selecting previously unselected package tk8.6-blt2.5.
Preparing to unpack .../037-tk8.6-blt2.5_2.5.3+dfsg-4.1_armhf.deb ...
Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1) ...
Selecting previously unselected package blt.
Preparing to unpack .../038-blt_2.5.3+dfsg-4.1_armhf.deb ...
Unpacking blt (2.5.3+dfsg-4.1) ...
Selecting previously unselected package bwa.
Preparing to unpack .../039-bwa_0.7.17-7_armhf.deb ...
Unpacking bwa (0.7.17-7) ...
Preparing to unpack .../040-dpkg-dev_1.22.1+rpi1_all.deb ...
Unpacking dpkg-dev (1.22.1+rpi1) over (1.22.0+rpi1) ...
Preparing to unpack .../041-libdpkg-perl_1.22.1+rpi1_all.deb ...
Unpacking libdpkg-perl (1.22.1+rpi1) over (1.22.0+rpi1) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../042-libdebhelper-perl_13.11.8_all.deb ...
Unpacking libdebhelper-perl (13.11.8) ...
Selecting previously unselected package libtool.
Preparing to unpack .../043-libtool_2.4.7-7_all.deb ...
Unpacking libtool (2.4.7-7) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../044-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../045-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../046-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../047-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../048-dh-strip-nondeterminism_1.13.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../049-libelf1_0.188-2.1+rpi1_armhf.deb ...
Unpacking libelf1:armhf (0.188-2.1+rpi1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../050-dwz_0.15-1_armhf.deb ...
Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:armhf.
Preparing to unpack .../051-libicu72_72.1-4_armhf.deb ...
Unpacking libicu72:armhf (72.1-4) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../052-libxml2_2.9.14+dfsg-1.3_armhf.deb ...
Unpacking libxml2:armhf (2.9.14+dfsg-1.3) ...
Selecting previously unselected package gettext.
Preparing to unpack .../053-gettext_0.21-13_armhf.deb ...
Unpacking gettext (0.21-13) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../054-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../055-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../056-debhelper_13.11.8_all.deb ...
Unpacking debhelper (13.11.8) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../057-python3-lib2to3_3.11.5-1_all.deb ...
Unpacking python3-lib2to3 (3.11.5-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../058-python3-distutils_3.11.5-1_all.deb ...
Unpacking python3-distutils (3.11.5-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../059-python3-pkg-resources_68.1.2-2_all.deb ...
Unpacking python3-pkg-resources (68.1.2-2) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../060-python3-setuptools_68.1.2-2_all.deb ...
Unpacking python3-setuptools (68.1.2-2) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../061-dh-python_6.20231107_all.deb ...
Unpacking dh-python (6.20231107) ...
Selecting previously unselected package fonts-lyx.
Preparing to unpack .../062-fonts-lyx_2.3.7-1_all.deb ...
Unpacking fonts-lyx (2.3.7-1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../063-libblas3_3.11.0-2_armhf.deb ...
Unpacking libblas3:armhf (3.11.0-2) ...
Selecting previously unselected package libdeflate0:armhf.
Preparing to unpack .../064-libdeflate0_1.18-1_armhf.deb ...
Unpacking libdeflate0:armhf (1.18-1) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../065-libexpat1-dev_2.5.0-2_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.5.0-2) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../066-libfribidi0_1.0.13-3_armhf.deb ...
Unpacking libfribidi0:armhf (1.0.13-3) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../067-libgfortran5_13.2.0-5+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (13.2.0-5+rpi1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../068-libglib2.0-0_2.78.1-4_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.78.1-4) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../069-libgraphite2-3_1.3.14-1_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.14-1) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../070-libharfbuzz0b_8.0.1-1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (8.0.1-1) ...
Selecting previously unselected package libimagequant0:armhf.
Preparing to unpack .../071-libimagequant0_2.18.0-1_armhf.deb ...
Unpacking libimagequant0:armhf (2.18.0-1) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../072-libjbig0_2.1-6.1_armhf.deb ...
Unpacking libjbig0:armhf (2.1-6.1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../073-libjpeg62-turbo_1%3a2.1.5-2_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:2.1.5-2) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../074-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Selecting previously unselected package libjs-jquery-ui.
Preparing to unpack .../075-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../076-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../077-libjs-sphinxdoc_7.2.6-2_all.deb ...
Unpacking libjs-sphinxdoc (7.2.6-2) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../078-liblapack3_3.11.0-2_armhf.deb ...
Unpacking liblapack3:armhf (3.11.0-2) ...
Selecting previously unselected package liblbfgsb0:armhf.
Preparing to unpack .../079-liblbfgsb0_3.0+dfsg.4-1_armhf.deb ...
Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../080-liblcms2-2_2.14-2_armhf.deb ...
Unpacking liblcms2-2:armhf (2.14-2) ...
Selecting previously unselected package liblerc4:armhf.
Preparing to unpack .../081-liblerc4_4.0.0+ds-3_armhf.deb ...
Unpacking liblerc4:armhf (4.0.0+ds-3) ...
Selecting previously unselected package libopenjp2-7:armhf.
Preparing to unpack .../082-libopenjp2-7_2.5.0-2_armhf.deb ...
Unpacking libopenjp2-7:armhf (2.5.0-2) ...
Selecting previously unselected package libpython3.11:armhf.
Preparing to unpack .../083-libpython3.11_3.11.6-3_armhf.deb ...
Unpacking libpython3.11:armhf (3.11.6-3) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../084-zlib1g-dev_1%3a1.2.13.dfsg-3_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.13.dfsg-3) ...
Selecting previously unselected package libpython3.11-dev:armhf.
Preparing to unpack .../085-libpython3.11-dev_3.11.6-3_armhf.deb ...
Unpacking libpython3.11-dev:armhf (3.11.6-3) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../086-libpython3-dev_3.11.4-5_armhf.deb ...
Unpacking libpython3-dev:armhf (3.11.4-5) ...
Selecting previously unselected package libqhull-r8.0:armhf.
Preparing to unpack .../087-libqhull-r8.0_2020.2-6_armhf.deb ...
Unpacking libqhull-r8.0:armhf (2020.2-6) ...
Selecting previously unselected package libraqm0:armhf.
Preparing to unpack .../088-libraqm0_0.10.1-1_armhf.deb ...
Unpacking libraqm0:armhf (0.10.1-1) ...
Selecting previously unselected package libsharpyuv0:armhf.
Preparing to unpack .../089-libsharpyuv0_1.3.2-0.3_armhf.deb ...
Unpacking libsharpyuv0:armhf (1.3.2-0.3) ...
Selecting previously unselected package libwebp7:armhf.
Preparing to unpack .../090-libwebp7_1.3.2-0.3_armhf.deb ...
Unpacking libwebp7:armhf (1.3.2-0.3) ...
Selecting previously unselected package libtiff6:armhf.
Preparing to unpack .../091-libtiff6_4.5.1+git230720-1_armhf.deb ...
Unpacking libtiff6:armhf (4.5.1+git230720-1) ...
Selecting previously unselected package libwebpdemux2:armhf.
Preparing to unpack .../092-libwebpdemux2_1.3.2-0.3_armhf.deb ...
Unpacking libwebpdemux2:armhf (1.3.2-0.3) ...
Selecting previously unselected package libwebpmux3:armhf.
Preparing to unpack .../093-libwebpmux3_1.3.2-0.3_armhf.deb ...
Unpacking libwebpmux3:armhf (1.3.2-0.3) ...
Selecting previously unselected package libxslt1.1:armhf.
Preparing to unpack .../094-libxslt1.1_1.1.35-1_armhf.deb ...
Unpacking libxslt1.1:armhf (1.1.35-1) ...
Selecting previously unselected package python-matplotlib-data.
Preparing to unpack .../095-python-matplotlib-data_3.6.3-1_all.deb ...
Unpacking python-matplotlib-data (3.6.3-1) ...
Selecting previously unselected package python3-appdirs.
Preparing to unpack .../096-python3-appdirs_1.4.4-4_all.deb ...
Unpacking python3-appdirs (1.4.4-4) ...
Selecting previously unselected package python3-attr.
Preparing to unpack .../097-python3-attr_23.1.0-2_all.deb ...
Unpacking python3-attr (23.1.0-2) ...
Selecting previously unselected package python3-brotli.
Preparing to unpack .../098-python3-brotli_1.1.0-2_armhf.deb ...
Unpacking python3-brotli (1.1.0-2) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../099-python3-numpy_1%3a1.24.2-1_armhf.deb ...
Unpacking python3-numpy (1:1.24.2-1) ...
Selecting previously unselected package python3-contourpy.
Preparing to unpack .../100-python3-contourpy_1.0.7-1_armhf.deb ...
Unpacking python3-contourpy (1.0.7-1) ...
Selecting previously unselected package python3-cycler.
Preparing to unpack .../101-python3-cycler_0.11.0-1_all.deb ...
Unpacking python3-cycler (0.11.0-1) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../102-python3-six_1.16.0-4_all.deb ...
Unpacking python3-six (1.16.0-4) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../103-python3-dateutil_2.8.2-3_all.deb ...
Unpacking python3-dateutil (2.8.2-3) ...
Selecting previously unselected package python3-decorator.
Preparing to unpack .../104-python3-decorator_5.1.1-5_all.deb ...
Unpacking python3-decorator (5.1.1-5) ...
Selecting previously unselected package python3.11-dev.
Preparing to unpack .../105-python3.11-dev_3.11.6-3_armhf.deb ...
Unpacking python3.11-dev (3.11.6-3) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../106-python3-dev_3.11.4-5_armhf.deb ...
Unpacking python3-dev (3.11.4-5) ...
Selecting previously unselected package python3-scipy.
Preparing to unpack .../107-python3-scipy_1.10.1-5+rpi1_armhf.deb ...
Unpacking python3-scipy (1.10.1-5+rpi1) ...
Selecting previously unselected package python3-ufolib2.
Preparing to unpack .../108-python3-ufolib2_0.16.0+dfsg1-1_all.deb ...
Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ...
Selecting previously unselected package python3-mpmath.
Preparing to unpack .../109-python3-mpmath_1.2.1-2_all.deb ...
Unpacking python3-mpmath (1.2.1-2) ...
Selecting previously unselected package python3-sympy.
Preparing to unpack .../110-python3-sympy_1.12-6_all.deb ...
Unpacking python3-sympy (1.12-6) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../111-python3-tz_2023.3.post1-1_all.deb ...
Unpacking python3-tz (2023.3.post1-1) ...
Selecting previously unselected package python3-fs.
Preparing to unpack .../112-python3-fs_2.4.16-2_all.deb ...
Unpacking python3-fs (2.4.16-2) ...
Selecting previously unselected package python3-lxml:armhf.
Preparing to unpack .../113-python3-lxml_4.9.3-1_armhf.deb ...
Unpacking python3-lxml:armhf (4.9.3-1) ...
Selecting previously unselected package python3-lz4.
Preparing to unpack .../114-python3-lz4_4.0.2+dfsg-1+b1_armhf.deb ...
Unpacking python3-lz4 (4.0.2+dfsg-1+b1) ...
Selecting previously unselected package python3-unicodedata2.
Preparing to unpack .../115-python3-unicodedata2_15.1.0+ds-1_armhf.deb ...
Unpacking python3-unicodedata2 (15.1.0+ds-1) ...
Selecting previously unselected package unicode-data.
Preparing to unpack .../116-unicode-data_15.1.0-1_all.deb ...
Unpacking unicode-data (15.1.0-1) ...
Selecting previously unselected package python3-fonttools.
Preparing to unpack .../117-python3-fonttools_4.38.0-1_armhf.deb ...
Unpacking python3-fonttools (4.38.0-1) ...
Selecting previously unselected package python3-joblib.
Preparing to unpack .../118-python3-joblib_1.3.2-1_all.deb ...
Unpacking python3-joblib (1.3.2-1) ...
Selecting previously unselected package python3-kiwisolver.
Preparing to unpack .../119-python3-kiwisolver_1.4.4-1_armhf.deb ...
Unpacking python3-kiwisolver (1.4.4-1) ...
Selecting previously unselected package python3-pil:armhf.
Preparing to unpack .../120-python3-pil_10.0.0-1_armhf.deb ...
Unpacking python3-pil:armhf (10.0.0-1) ...
Selecting previously unselected package python3-tk:armhf.
Preparing to unpack .../121-python3-tk_3.11.5-1_armhf.deb ...
Unpacking python3-tk:armhf (3.11.5-1) ...
Selecting previously unselected package python3-pil.imagetk:armhf.
Preparing to unpack .../122-python3-pil.imagetk_10.0.0-1_armhf.deb ...
Unpacking python3-pil.imagetk:armhf (10.0.0-1) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../123-python3-pyparsing_3.1.1-1_all.deb ...
Unpacking python3-pyparsing (3.1.1-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../124-python3-packaging_23.2-1_all.deb ...
Unpacking python3-packaging (23.2-1) ...
Selecting previously unselected package python3-matplotlib.
Preparing to unpack .../125-python3-matplotlib_3.6.3-1_armhf.deb ...
Unpacking python3-matplotlib (3.6.3-1) ...
Selecting previously unselected package python3-pandas-lib:armhf.
Preparing to unpack .../126-python3-pandas-lib_1.5.3+dfsg-6_armhf.deb ...
Unpacking python3-pandas-lib:armhf (1.5.3+dfsg-6) ...
Selecting previously unselected package python3-pandas.
Preparing to unpack .../127-python3-pandas_1.5.3+dfsg-6_all.deb ...
Unpacking python3-pandas (1.5.3+dfsg-6) ...
Selecting previously unselected package python3-patsy.
Preparing to unpack .../128-python3-patsy_0.5.3-1_all.deb ...
Unpacking python3-patsy (0.5.3-1) ...
Selecting previously unselected package python3-pubsub.
Preparing to unpack .../129-python3-pubsub_4.0.3-7_all.deb ...
Unpacking python3-pubsub (4.0.3-7) ...
Selecting previously unselected package python3-threadpoolctl.
Preparing to unpack .../130-python3-threadpoolctl_3.1.0-1_all.deb ...
Unpacking python3-threadpoolctl (3.1.0-1) ...
Selecting previously unselected package python3-sklearn-lib:armhf.
Preparing to unpack .../131-python3-sklearn-lib_1.2.1+dfsg-1_armhf.deb ...
Unpacking python3-sklearn-lib:armhf (1.2.1+dfsg-1) ...
Selecting previously unselected package python3-sklearn.
Preparing to unpack .../132-python3-sklearn_1.2.1+dfsg-1_all.deb ...
Unpacking python3-sklearn (1.2.1+dfsg-1) ...
Selecting previously unselected package python3-statsmodels-lib:armhf.
Preparing to unpack .../133-python3-statsmodels-lib_0.14.0+dfsg-5+rpi1_armhf.deb ...
Unpacking python3-statsmodels-lib:armhf (0.14.0+dfsg-5+rpi1) ...
Selecting previously unselected package python3-statsmodels.
Preparing to unpack .../134-python3-statsmodels_0.14.0+dfsg-5+rpi1_all.deb ...
Unpacking python3-statsmodels (0.14.0+dfsg-5+rpi1) ...
Selecting previously unselected package sbuild-build-depends-main-dummy.
Preparing to unpack .../135-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up media-types (10.1.0) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up liblcms2-2:armhf (2.14-2) ...
Setting up libsharpyuv0:armhf (1.3.2-0.3) ...
Setting up libxau6:armhf (1:1.0.9-1) ...
Setting up libicu72:armhf (72.1-4) ...
Setting up liblerc4:armhf (4.0.0+ds-3) ...
Setting up bsdextrautils (2.39.2-6) ...
Setting up libmagic-mgc (1:5.45-2) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.78.1-4) ...
No schema files found: doing nothing.
Setting up bwa (0.7.17-7) ...
Setting up fonts-lyx (2.3.7-1) ...
Setting up libpython3.11-stdlib:armhf (3.11.6-3) ...
Setting up libdebhelper-perl (13.11.8) ...
Setting up libbrotli1:armhf (1.1.0-2) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libmagic1:armhf (1:5.45-2) ...
Setting up libdeflate0:armhf (1.18-1) ...
Setting up gettext-base (0.21-13) ...
Setting up m4 (1.4.19-4) ...
Setting up libqhull-r8.0:armhf (2020.2-6) ...
Setting up file (1:5.45-2) ...
Setting up libjbig0:armhf (2.1-6.1) ...
Setting up unicode-data (15.1.0-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libblas3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.5.0-2) ...
Setting up libjpeg62-turbo:armhf (1:2.1.5-2) ...
Setting up libx11-data (2:1.8.7-1) ...
Setting up libfribidi0:armhf (1.0.13-3) ...
Setting up libimagequant0:armhf (2.18.0-1) ...
Setting up libproc2-0:armhf (2:4.0.4-2) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libpng16-16:armhf (1.6.40-2) ...
Setting up libtcl8.6:armhf (8.6.13+dfsg-2) ...
Setting up autopoint (0.21-13) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up libdpkg-perl (1.22.1+rpi1) ...
Setting up libgfortran5:armhf (13.2.0-5+rpi1) ...
Setting up autoconf (2.71-3) ...
Setting up libwebp7:armhf (1.3.2-0.3) ...
Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-3) ...
Setting up mount (2.39.2-6) ...
Setting up sensible-utils (0.0.20) ...
Setting up libtiff6:armhf (4.5.1+git230720-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up procps (2:4.0.4-2) ...
Setting up libopenjp2-7:armhf (2.5.0-2) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up python-matplotlib-data (3.6.3-1) ...
Setting up libwebpmux3:armhf (1.3.2-0.3) ...
Setting up libbsd0:armhf (0.11.7-4) ...
Setting up mailcap (3.70+nmu1) ...
Setting up libelf1:armhf (0.188-2.1+rpi1) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.3) ...
Setting up libpython3-stdlib:armhf (3.11.4-5) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up python3.11 (3.11.6-3) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-13) ...
Setting up mime-support (3.66) ...
Setting up libpython3.11:armhf (3.11.6-3) ...
Setting up libtool (2.4.7-7) ...
Setting up fontconfig-config (2.14.2-6) ...
Setting up libwebpdemux2:armhf (1.3.2-0.3) ...
Setting up python3 (3.11.4-5) ...
Setting up python3-tz (2023.3.post1-1) ...
Setting up dpkg-dev (1.22.1+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up python3-six (1.16.0-4) ...
Setting up dh-autoreconf (20) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-packaging (23.2-1) ...
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up python3-pyparsing (3.1.1-1) ...
Setting up libfreetype6:armhf (2.13.2+dfsg-1) ...
Setting up libpython3.11-dev:armhf (3.11.6-3) ...
Setting up python3-brotli (1.1.0-2) ...
Setting up python3-cycler (0.11.0-1) ...
Setting up python3-kiwisolver (1.4.4-1) ...
Setting up libjs-sphinxdoc (7.2.6-2) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up python3-pubsub (4.0.3-7) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.23.0-3) ...
Setting up libxslt1.1:armhf (1.1.35-1) ...
Setting up libx11-6:armhf (2:1.8.7-1) ...
Setting up libharfbuzz0b:armhf (8.0.1-1) ...
Setting up python3-dateutil (2.8.2-3) ...
Setting up libfontconfig1:armhf (2.14.2-6) ...
Setting up python3-mpmath (1.2.1-2) ...
Setting up python3-lib2to3 (3.11.5-1) ...
Setting up python3-appdirs (1.4.4-4) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.4-1) ...
Setting up python3-pkg-resources (68.1.2-2) ...
Setting up python3-distutils (3.11.5-1) ...
Setting up python3-sympy (1.12-6) ...
Setting up python3-attr (23.1.0-2) ...
Setting up libpython3-dev:armhf (3.11.4-5) ...
Setting up python3-setuptools (68.1.2-2) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up python3-joblib (1.3.2-1) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b1) ...
Setting up python3.11-dev (3.11.6-3) ...
Setting up python3-unicodedata2 (15.1.0+ds-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3-threadpoolctl (3.1.0-1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up man-db (2.12.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-fs (2.4.16-2) ...
Setting up libraqm0:armhf (0.10.1-1) ...
Setting up python3-dev (3.11.4-5) ...
Setting up python3-numpy (1:1.24.2-1) ...
Setting up python3-lxml:armhf (4.9.3-1) ...
Setting up python3-contourpy (1.0.7-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-statsmodels-lib:armhf (0.14.0+dfsg-5+rpi1) ...
Setting up dh-python (6.20231107) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up python3-scipy (1.10.1-5+rpi1) ...
Setting up libtk8.6:armhf (8.6.13-2) ...
Setting up python3-pandas-lib:armhf (1.5.3+dfsg-6) ...
Setting up python3-sklearn-lib:armhf (1.2.1+dfsg-1) ...
Setting up debhelper (13.11.8) ...
Setting up python3-patsy (0.5.3-1) ...
Setting up python3-pil:armhf (10.0.0-1) ...
Setting up python3-pandas (1.5.3+dfsg-6) ...
Setting up python3-sklearn (1.2.1+dfsg-1) ...
Setting up python3-statsmodels (0.14.0+dfsg-5+rpi1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ...
Setting up blt (2.5.3+dfsg-4.1) ...
Setting up python3-tk:armhf (3.11.5-1) ...
Setting up python3-pil.imagetk:armhf (10.0.0-1) ...
Setting up python3-fonttools (4.38.0-1) ...
Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
Setting up python3-matplotlib (3.6.3-1) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.37-12+rpi2) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep 1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc-12_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 libc6-dev_2.37-12+rpi2 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++-13-dev_13.2.0-5+rpi1 libstdc++6_13.2.0-5+rpi1 linux-libc-dev_6.5.6-1+rpi1
Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.2 bash_5.2.15-2 binutils_2.41-6+rpi1 binutils-arm-linux-gnueabihf_2.41-6+rpi1 binutils-common_2.41-6+rpi1 blt_2.5.3+dfsg-4.1 bsdextrautils_2.39.2-6 bsdutils_1:2.39.2-6 build-essential_12.9 bwa_0.7.17-7 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:13.2.0-1+rpi1 cpp-12_12.3.0-10+rpi1 cpp-13_13.2.0-5+rpi1 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.8 debianutils_5.14 dh-autoreconf_20 dh-python_6.20231107 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dirmngr_2.2.40-1.1 dpkg_1.22.1+rpi1 dpkg-dev_1.22.1+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 fontconfig-config_2.14.2-6 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lyx_2.3.7-1 g++_4:13.2.0-1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc_4:13.2.0-1+rpi1 gcc-10-base_10.4.0-7+rpi1 gcc-12_12.3.0-10+rpi1 gcc-12-base_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 gcc-13-base_13.2.0-5+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-13 gettext-base_0.21-13 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libasan8_13.2.0-5+rpi1 libassuan0_2.5.6-1 libatomic1_13.2.0-5+rpi1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbinutils_2.41-6+rpi1 libblas3_3.11.0-2 libblkid1_2.39.2-6 libbrotli1_1.1.0-2 libbsd0_0.11.7-4 libbz2-1.0_1.0.8-5+b2 libc-bin_2.37-12+rpi2 libc-dev-bin_2.37-12+rpi2 libc6_2.37-12+rpi2 libc6-dev_2.37-12+rpi2 libcap-ng0_0.8.3-1+b1 libcap2_1:2.66-4 libcc1-0_13.2.0-5+rpi1 libcom-err2_1.47.0-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-6+rpi1 libctf0_2.41-6+rpi1 libdb5.3_5.3.28+dfsg2-2 libdebconfclient0_0.271 libdebhelper-perl_13.11.8 libdeflate0_1.18-1 libdpkg-perl_1.22.1+rpi1 libelf1_0.188-2.1+rpi1 libexpat1_2.5.0-2 libexpat1-dev_2.5.0-2 libext2fs2_1.47.0-2 libfakeroot_1.32.1-1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libfontconfig1_2.14.2-6 libfreetype6_2.13.2+dfsg-1 libfribidi0_1.0.13-3 libgcc-12-dev_12.3.0-10+rpi1 libgcc-13-dev_13.2.0-5+rpi1 libgcc-s1_13.2.0-5+rpi1 libgcrypt20_1.10.2-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_13.2.0-5+rpi1 libglib2.0-0_2.78.1-4 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4 libgomp1_13.2.0-5+rpi1 libgpg-error0_1.47-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20.1-4 libharfbuzz0b_8.0.1-1 libhogweed6_3.9.1-2 libicu72_72.1-4 libidn2-0_2.3.4-1 libimagequant0_2.18.0-1 libisl23_0.26-3 libjansson4_2.14-2 libjbig0_2.1-6.1 libjpeg62-turbo_1:2.1.5-2 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libjs-sphinxdoc_7.2.6-2 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libk5crypto3_1.20.1-4 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-4 libkrb5support0_1.20.1-4 libksba8_1.6.4-2 liblapack3_3.11.0-2 liblbfgsb0_3.0+dfsg.4-1 liblcms2-2_2.14-2 libldap-2.5-0_2.5.13+dfsg-5+rpi1 liblerc4_4.0.0+ds-3 liblocale-gettext-perl_1.07-6 liblz4-1_1.9.4-1+rpi1+b1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-6 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libncursesw6_6.4+20231016-1 libnettle8_3.9.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libopenjp2-7_2.5.0-2 libp11-kit0_0.25.0-5 libpam-modules_1.5.2-9.1 libpam-modules-bin_1.5.2-9.1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1 libpcre2-8-0_10.42-4 libperl5.36_5.36.0-9 libpipeline1_1.5.7-1 libpng16-16_1.6.40-2 libproc2-0_2:4.0.4-2 libpython3-dev_3.11.4-5 libpython3-stdlib_3.11.4-5 libpython3.11_3.11.6-3 libpython3.11-dev_3.11.6-3 libpython3.11-minimal_3.11.6-3 libpython3.11-stdlib_3.11.6-3 libqhull-r8.0_2020.2-6 libraqm0_0.10.1-1 libreadline8_8.2-1.3 libsasl2-2_2.1.28+dfsg1-3 libsasl2-modules-db_2.1.28+dfsg1-3 libseccomp2_2.5.4-1+rpi1+b1 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-1 libsframe1_2.41-6+rpi1 libsharpyuv0_1.3.2-0.3 libsmartcols1_2.39.2-6 libsqlite3-0_3.43.2-1 libss2_1.47.0-2 libssl3_3.0.11-1 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++-13-dev_13.2.0-5+rpi1 libstdc++6_13.2.0-5+rpi1 libsub-override-perl_0.09-4 libsystemd0_254.5-1+rpi1 libtasn1-6_4.19.0-3 libtcl8.6_8.6.13+dfsg-2 libtext-charwidth-perl_0.04-11 libtext-iconv-perl_1.7-8 libtiff6_4.5.1+git230720-1 libtinfo6_6.4+20231016-1 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtk8.6_8.6.13-2 libtool_2.4.7-7 libubsan1_13.2.0-5+rpi1 libuchardet0_0.0.7-1 libudev1_254.5-1+rpi1 libunistring5_1.1-2 libuuid1_2.39.2-6 libwebp7_1.3.2-0.3 libwebpdemux2_1.3.2-0.3 libwebpmux3_1.3.2-0.3 libx11-6_2:1.8.7-1 libx11-data_2:1.8.7-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.3 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxss1_1:1.2.3-1 libxxhash0_0.8.2-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.6-1+rpi1 login_1:4.13+dfsg1-3 logsave_1.47.0-2 lsb-base_11.6+rpi1 m4_1.4.19-4 mailcap_3.70+nmu1 make_4.3-4.1 man-db_2.12.0-1 mawk_1.3.4.20230808-1 media-types_10.1.0 mime-support_3.66 mount_2.39.2-6 ncurses-base_6.4+20231016-1 ncurses-bin_6.4+20231016-1 passwd_1:4.13+dfsg1-3 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.36_5.36.0-9 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 procps_2:4.0.4-2 python-matplotlib-data_3.6.3-1 python3_3.11.4-5 python3-appdirs_1.4.4-4 python3-attr_23.1.0-2 python3-brotli_1.1.0-2 python3-contourpy_1.0.7-1 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-3 python3-decorator_5.1.1-5 python3-dev_3.11.4-5 python3-distutils_3.11.5-1 python3-fonttools_4.38.0-1 python3-fs_2.4.16-2 python3-joblib_1.3.2-1 python3-kiwisolver_1.4.4-1 python3-lib2to3_3.11.5-1 python3-lxml_4.9.3-1 python3-lz4_4.0.2+dfsg-1+b1 python3-matplotlib_3.6.3-1 python3-minimal_3.11.4-5 python3-mpmath_1.2.1-2 python3-numpy_1:1.24.2-1 python3-packaging_23.2-1 python3-pandas_1.5.3+dfsg-6 python3-pandas-lib_1.5.3+dfsg-6 python3-patsy_0.5.3-1 python3-pil_10.0.0-1 python3-pil.imagetk_10.0.0-1 python3-pkg-resources_68.1.2-2 python3-pubsub_4.0.3-7 python3-pyparsing_3.1.1-1 python3-scipy_1.10.1-5+rpi1 python3-setuptools_68.1.2-2 python3-six_1.16.0-4 python3-sklearn_1.2.1+dfsg-1 python3-sklearn-lib_1.2.1+dfsg-1 python3-statsmodels_0.14.0+dfsg-5+rpi1 python3-statsmodels-lib_0.14.0+dfsg-5+rpi1 python3-sympy_1.12-6 python3-threadpoolctl_3.1.0-1 python3-tk_3.11.5-1 python3-tz_2023.3.post1-1 python3-ufolib2_0.16.0+dfsg1-1 python3-unicodedata2_15.1.0+ds-1 python3.11_3.11.6-3 python3.11-dev_3.11.6-3 python3.11-minimal_3.11.6-3 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sysvinit-utils_3.08-3 tar_1.34+dfsg-1.2 tk8.6-blt2.5_2.5.3+dfsg-4.1 tzdata_2023c-10 unicode-data_15.1.0-1 usr-is-merged_37 util-linux_2.39.2-6 x11-common_1:7.7+23 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: tnseq-transit
Binary: tnseq-transit
Architecture: any
Version: 3.3.3-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>, Étienne Mollier <emollier@debian.org>
Homepage: http://saclab.tamu.edu/essentiality/transit/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/tnseq-transit
Vcs-Git: https://salsa.debian.org/med-team/tnseq-transit.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-dev, python3-setuptools, python3-numpy, python3-scipy, python3-pil, python3-matplotlib, python3-sklearn <!nocheck>, python3-statsmodels, python3-pubsub, bwa
Package-List:
tnseq-transit deb science optional arch=any
Checksums-Sha1:
ef86180e107d2a03df7f28e21bfbf42f758f973c 40957167 tnseq-transit_3.3.3.orig.tar.gz
fd3b897676f8fc0e40d7dd5c7269e4a8197769f9 6864 tnseq-transit_3.3.3-1.debian.tar.xz
Checksums-Sha256:
e889dad89d5034cbe5f0c60c9814337e1dfacee6425493aa1e0988484facd01b 40957167 tnseq-transit_3.3.3.orig.tar.gz
2de535491919ede551c16c34620353bdba0ea521136e0c70d7eae4ac917c4558 6864 tnseq-transit_3.3.3-1.debian.tar.xz
Files:
7366123fe46a045816f81e369db28109 40957167 tnseq-transit_3.3.3.orig.tar.gz
c0e29c94a787bfb4e3d31504f53dcfdb 6864 tnseq-transit_3.3.3-1.debian.tar.xz
Dgit: 72168430faf648fd2127bc04919042c5543398fb debian archive/debian/3.3.3-1 https://git.dgit.debian.org/tnseq-transit
-----BEGIN PGP SIGNATURE-----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=bPRz
-----END PGP SIGNATURE-----
gpgv: Signature made Wed Nov 29 19:09:59 2023 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./tnseq-transit_3.3.3-1.dsc: no acceptable signature found
dpkg-source: info: extracting tnseq-transit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking tnseq-transit_3.3.3.orig.tar.gz
dpkg-source: info: unpacking tnseq-transit_3.3.3-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying skip_test_requiring_non_existing_input_data.patch
dpkg-source: info: applying fix_problematic_comparison.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-037b3174-1839-4681-bcd1-7a738c301ffd
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package tnseq-transit
dpkg-buildpackage: info: source version 3.3.3-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:310: python3.11 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
rm -rf tests_invalid_data
rm -rf tnseq_transit.egg-info
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p tests_invalid_data
if [ -L tests/H37Rv.fna ] && ! [ -e tests/H37Rv.fna ] \
; then mv tests/H37Rv.fna tests_invalid_data \
; fi
dh_auto_configure
I: pybuild base:310: python3.11 setup.py config
running config
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:310: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/tpp_gui.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/tpp_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/draw_trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/fileDisplay.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/images.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/norm_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/qcDisplay.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/stat_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/tnseq_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/transit_gui.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/transit_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/view_trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/CGI.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/anova.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/binomial.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/corrplot.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/example.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/gi.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/griffin.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/gumbel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/heatmap.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/hmm.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/norm.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/normalize.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/pathway_enrichment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/rankproduct.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/resampling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/tn5gaps.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/tnseq_stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/ttnfitness.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/utest.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/zinb.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert
copying src/pytransit/convert/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert
copying src/pytransit/convert/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert
copying src/pytransit/convert/gff_to_prot_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/combined_wig.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/igv.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/mean_counts.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/prot_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export
running egg_info
creating tnseq_transit.egg-info
writing tnseq_transit.egg-info/PKG-INFO
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
writing requirements to tnseq_transit.egg-info/requires.txt
writing top-level names to tnseq_transit.egg-info/top_level.txt
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'VERSION'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
adding license file 'LICENSE.md'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pytransit.data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'pytransit.data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'pytransit.data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'pytransit.data' to be distributed and are
already explicitly excluding 'pytransit.data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pytransit.data.CGI' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'pytransit.data.CGI' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'pytransit.data.CGI' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'pytransit.data.CGI' to be distributed and are
already explicitly excluding 'pytransit.data.CGI' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pytransit.genomes' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'pytransit.genomes' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'pytransit.genomes' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'pytransit.genomes' to be distributed and are
already explicitly excluding 'pytransit.genomes' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/COG_roles.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_associated_Rvs-3-11-18.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_associated_Rvs.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_term_names.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_terms_for_each_Rv.obo-3-11-18.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv_COG_roles.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv_GO_terms.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv_sanger_roles.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/README.md -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep3.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_glycerol_combined.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/gene_ontology.1_2.3-11-18.obo -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/iron_combined_wig4.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/iron_samples_metadata.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg_covar.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg_interactions.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/sanger_roles.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/smeg_COG_roles.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/smeg_GO_terms.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI
copying src/pytransit/data/CGI/IDs.H37Rv.CRISPRi.lib.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI
copying src/pytransit/data/CGI/counts_metadata.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI
copying src/pytransit/data/CGI/sgRNA_metadata.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI
copying src/pytransit/data/CGI/uninduced_ATC_counts.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/BCG.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/BCG.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD_mod3.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/genomes.html -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test -- --system=custom --test-args="PYTHONPATH=tests {interpreter} -m unittest -v tests/*.py"
I: pybuild base:310: PYTHONPATH=tests python3.11 -m unittest -v tests/*.py
test_Binomial (tests.test_analysis_methods.TestMethods.test_Binomial) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:1290: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:1217: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:521: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(self.annotation):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
####################
tests.test_analysis_methods.TestMethods.test_Binomial
####################
[binomial] Starting Binomial Method
[binomial] Getting Data
[binomial] Setting Parameters
[binomial] Setting Initial Values
[binomial] Running Binomial Method... 0.2%
[binomial] Running Binomial Method... 0.3%
[binomial] Running Binomial Method... 0.4%
[binomial] Running Binomial Method... 0.5%
[binomial] Running Binomial Method... 0.5%
[binomial] Running Binomial Method... 0.6%
[binomial] Running Binomial Method... 0.7%
[binomial] Running Binomial Method... 0.8%
[binomial] Running Binomial Method... 0.9%
[binomial] Running Binomial Method... 1.0%
[binomial] Running Binomial Method... 1.1%
[binomial] Running Binomial Method... 1.2%
[binomial] Running Binomial Method... 1.3%
[binomial] Running Binomial Method... 1.4%
[binomial] Running Binomial Method... 1.5%
[binomial] Running Binomial Method... 1.5%
[binomial] Running Binomial Method... 1.6%
[binomial] Running Binomial Method... 1.7%
[binomial] Running Binomial Method... 1.8%
[binomial] Running Binomial Method... 1.9%
[binomial] Running Binomial Method... 2.0%
[binomial] Running Binomial Method... 2.1%
[binomial] Running Binomial Method... 2.2%
[binomial] Running Binomial Method... 2.3%
[binomial] Running Binomial Method... 2.4%
[binomial] Running Binomial Method... 2.5%
[binomial] Running Binomial Method... 2.5%
[binomial] Running Binomial Method... 2.6%
[binomial] Running Binomial Method... 2.7%
[binomial] Running Binomial Method... 2.8%
[binomial] Running Binomial Method... 2.9%
[binomial] Running Binomial Method... 3.0%
[binomial] Running Binomial Method... 3.1%
[binomial] Running Binomial Method... 3.2%
[binomial] Running Binomial Method... 3.3%
[binomial] Running Binomial Method... 3.4%
[binomial] Running Binomial Method... 3.5%
[binomial] Running Binomial Method... 3.5%
[binomial] Running Binomial Method... 3.6%
[binomial] Running Binomial Method... 3.7%
[binomial] Running Binomial Method... 3.8%
[binomial] Running Binomial Method... 3.9%
[binomial] Running Binomial Method... 4.0%
[binomial] Running Binomial Method... 4.1%
[binomial] Running Binomial Method... 4.2%
[binomial] Running Binomial Method... 4.3%
[binomial] Running Binomial Method... 4.4%
[binomial] Running Binomial Method... 4.5%
[binomial] Running Binomial Method... 4.5%
[binomial] Running Binomial Method... 4.6%
[binomial] Running Binomial Method... 4.7%
[binomial] Running Binomial Method... 4.8%
[binomial] Running Binomial Method... 4.9%
[binomial] Running Binomial Method... 5.0%
[binomial] Running Binomial Method... 5.1%
[binomial] Running Binomial Method... 5.2%
[binomial] Running Binomial Method... 5.3%
[binomial] Running Binomial Method... 5.4%
[binomial] Running Binomial Method... 5.5%
[binomial] Running Binomial Method... 5.5%
[binomial] Running Binomial Method... 5.6%
[binomial] Running Binomial Method... 5.7%
[binomial] Running Binomial Method... 5.8%
[binomial] Running Binomial Method... 5.9%
[binomial] Running Binomial Method... 6.0%
[binomial] Running Binomial Method... 6.1%
[binomial] Running Binomial Method... 6.2%
[binomial] Running Binomial Method... 6.3%
[binomial] Running Binomial Method... 6.4%
[binomial] Running Binomial Method... 6.5%
[binomial] Running Binomial Method... 6.5%
[binomial] Running Binomial Method... 6.6%
[binomial] Running Binomial Method... 6.7%
[binomial] Running Binomial Method... 6.8%
[binomial] Running Binomial Method... 6.9%
[binomial] Running Binomial Method... 7.0%
[binomial] Running Binomial Method... 7.1%
[binomial] Running Binomial Method... 7.2%
[binomial] Running Binomial Method... 7.3%
[binomial] Running Binomial Method... 7.4%
[binomial] Running Binomial Method... 7.5%
[binomial] Running Binomial Method... 7.5%
[binomial] Running Binomial Method... 7.6%
[binomial] Running Binomial Method... 7.7%
[binomial] Running Binomial Method... 7.8%
[binomial] Running Binomial Method... 7.9%
[binomial] Running Binomial Method... 8.0%
[binomial] Running Binomial Method... 8.1%
[binomial] Running Binomial Method... 8.2%
[binomial] Running Binomial Method... 8.3%
[binomial] Running Binomial Method... 8.4%
[binomial] Running Binomial Method... 8.5%
[binomial] Running Binomial Method... 8.5%
[binomial] Running Binomial Method... 8.6%
[binomial] Running Binomial Method... 8.7%
[binomial] Running Binomial Method... 8.8%
[binomial] Running Binomial Method... 8.9%
[binomial] Running Binomial Method... 9.0%
[binomial] Running Binomial Method... 9.1%
[binomial] Running Binomial Method... 9.2%
[binomial] Running Binomial Method... 9.3%
[binomial] Running Binomial Method... 9.4%
[binomial] Running Binomial Method... 9.5%
[binomial] Running Binomial Method... 9.5%
[binomial] Running Binomial Method... 9.6%
[binomial] Running Binomial Method... 9.7%
[binomial] Running Binomial Method... 9.8%
[binomial] Running Binomial Method... 9.9%
[binomial] Running Binomial Method... 10.0%
[binomial] Running Binomial Method... 10.1%
[binomial] Running Binomial Method... 10.2%
[binomial] Running Binomial Method... 10.3%
[binomial] Running Binomial Method... 10.4%
[binomial] Running Binomial Method... 10.5%
[binomial] Running Binomial Method... 10.5%
[binomial] Running Binomial Method... 10.6%
[binomial] Running Binomial Method... 10.7%
[binomial] Running Binomial Method... 10.8%
[binomial] Running Binomial Method... 10.9%
[binomial] Running Binomial Method... 11.0%
[binomial] Running Binomial Method... 11.1%
[binomial] Running Binomial Method... 11.2%
[binomial] Running Binomial Method... 11.3%
[binomial] Running Binomial Method... 11.4%
[binomial] Running Binomial Method... 11.5%
[binomial] Running Binomial Method... 11.5%
[binomial] Running Binomial Method... 11.6%
[binomial] Running Binomial Method... 11.7%
[binomial] Running Binomial Method... 11.8%
[binomial] Running Binomial Method... 11.9%
[binomial] Running Binomial Method... 12.0%
[binomial] Running Binomial Method... 12.1%
[binomial] Running Binomial Method... 12.2%
[binomial] Running Binomial Method... 12.3%
[binomial] Running Binomial Method... 12.4%
[binomial] Running Binomial Method... 12.5%
[binomial] Running Binomial Method... 12.5%
[binomial] Running Binomial Method... 12.6%
[binomial] Running Binomial Method... 12.7%
[binomial] Running Binomial Method... 12.8%
[binomial] Running Binomial Method... 12.9%
[binomial] Running Binomial Method... 13.0%
[binomial] Running Binomial Method... 13.1%
[binomial] Running Binomial Method... 13.2%
[binomial] Running Binomial Method... 13.3%
[binomial] Running Binomial Method... 13.4%
[binomial] Running Binomial Method... 13.5%
[binomial] Running Binomial Method... 13.5%
[binomial] Running Binomial Method... 13.6%
[binomial] Running Binomial Method... 13.7%
[binomial] Running Binomial Method... 13.8%
[binomial] Running Binomial Method... 13.9%
[binomial] Running Binomial Method... 14.0%
[binomial] Running Binomial Method... 14.1%
[binomial] Running Binomial Method... 14.2%
[binomial] Running Binomial Method... 14.3%
[binomial] Running Binomial Method... 14.4%
[binomial] Running Binomial Method... 14.5%
[binomial] Running Binomial Method... 14.5%
[binomial] Running Binomial Method... 14.6%
[binomial] Running Binomial Method... 14.7%
[binomial] Running Binomial Method... 14.8%
[binomial] Running Binomial Method... 14.9%
[binomial] Running Binomial Method... 15.0%
[binomial] Running Binomial Method... 15.1%
[binomial] Running Binomial Method... 15.2%
[binomial] Running Binomial Method... 15.3%
[binomial] Running Binomial Method... 15.4%
[binomial] Running Binomial Method... 15.5%
[binomial] Running Binomial Method... 15.5%
[binomial] Running Binomial Method... 15.6%
[binomial] Running Binomial Method... 15.7%
[binomial] Running Binomial Method... 15.8%
[binomial] Running Binomial Method... 15.9%
[binomial] Running Binomial Method... 16.0%
[binomial] Running Binomial Method... 16.1%
[binomial] Running Binomial Method... 16.2%
[binomial] Running Binomial Method... 16.3%
[binomial] Running Binomial Method... 16.4%
[binomial] Running Binomial Method... 16.5%
[binomial] Running Binomial Method... 16.5%
[binomial] Running Binomial Method... 16.6%
[binomial] Running Binomial Method... 16.7%
[binomial] Running Binomial Method... 16.8%
[binomial] Running Binomial Method... 16.9%
[binomial] Running Binomial Method... 17.0%
[binomial] Running Binomial Method... 17.1%
[binomial] Running Binomial Method... 17.2%
[binomial] Running Binomial Method... 17.3%
[binomial] Running Binomial Method... 17.4%
[binomial] Running Binomial Method... 17.5%
[binomial] Running Binomial Method... 17.5%
[binomial] Running Binomial Method... 17.6%
[binomial] Running Binomial Method... 17.7%
[binomial] Running Binomial Method... 17.8%
[binomial] Running Binomial Method... 17.9%
[binomial] Running Binomial Method... 18.0%
[binomial] Running Binomial Method... 18.1%
[binomial] Running Binomial Method... 18.2%
[binomial] Running Binomial Method... 18.3%
[binomial] Running Binomial Method... 18.4%
[binomial] Running Binomial Method... 18.5%
[binomial] Running Binomial Method... 18.5%
[binomial] Running Binomial Method... 18.6%
[binomial] Running Binomial Method... 18.7%
[binomial] Running Binomial Method... 18.8%
[binomial] Running Binomial Method... 18.9%
[binomial] Running Binomial Method... 19.0%
[binomial] Running Binomial Method... 19.1%
[binomial] Running Binomial Method... 19.2%
[binomial] Running Binomial Method... 19.3%
[binomial] Running Binomial Method... 19.4%
[binomial] Running Binomial Method... 19.5%
[binomial] Running Binomial Method... 19.5%
[binomial] Running Binomial Method... 19.6%
[binomial] Running Binomial Method... 19.7%
[binomial] Running Binomial Method... 19.8%
[binomial] Running Binomial Method... 19.9%
[binomial] Running Binomial Method... 20.0%
[binomial] Running Binomial Method... 20.1%
[binomial] Running Binomial Method... 20.2%
[binomial] Running Binomial Method... 20.3%
[binomial] Running Binomial Method... 20.4%
[binomial] Running Binomial Method... 20.5%
[binomial] Running Binomial Method... 20.5%
[binomial] Running Binomial Method... 20.6%
[binomial] Running Binomial Method... 20.7%
[binomial] Running Binomial Method... 20.8%
[binomial] Running Binomial Method... 20.9%
[binomial] Running Binomial Method... 21.0%
[binomial] Running Binomial Method... 21.1%
[binomial] Running Binomial Method... 21.2%
[binomial] Running Binomial Method... 21.3%
[binomial] Running Binomial Method... 21.4%
[binomial] Running Binomial Method... 21.5%
[binomial] Running Binomial Method... 21.5%
[binomial] Running Binomial Method... 21.6%
[binomial] Running Binomial Method... 21.7%
[binomial] Running Binomial Method... 21.8%
[binomial] Running Binomial Method... 21.9%
[binomial] Running Binomial Method... 22.0%
[binomial] Running Binomial Method... 22.1%
[binomial] Running Binomial Method... 22.2%
[binomial] Running Binomial Method... 22.3%
[binomial] Running Binomial Method... 22.4%
[binomial] Running Binomial Method... 22.5%
[binomial] Running Binomial Method... 22.5%
[binomial] Running Binomial Method... 22.6%
[binomial] Running Binomial Method... 22.7%
[binomial] Running Binomial Method... 22.8%
[binomial] Running Binomial Method... 22.9%
[binomial] Running Binomial Method... 23.0%
[binomial] Running Binomial Method... 23.1%
[binomial] Running Binomial Method... 23.2%
[binomial] Running Binomial Method... 23.3%
[binomial] Running Binomial Method... 23.4%
[binomial] Running Binomial Method... 23.5%
[binomial] Running Binomial Method... 23.5%
[binomial] Running Binomial Method... 23.6%
[binomial] Running Binomial Method... 23.7%
[binomial] Running Binomial Method... 23.8%
[binomial] Running Binomial Method... 23.9%
[binomial] Running Binomial Method... 24.0%
[binomial] Running Binomial Method... 24.1%
[binomial] Running Binomial Method... 24.2%
[binomial] Running Binomial Method... 24.3%
[binomial] Running Binomial Method... 24.4%
[binomial] Running Binomial Method... 24.5%
[binomial] Running Binomial Method... 24.5%
[binomial] Running Binomial Method... 24.6%
[binomial] Running Binomial Method... 24.7%
[binomial] Running Binomial Method... 24.8%
[binomial] Running Binomial Method... 24.9%
[binomial] Running Binomial Method... 25.0%
[binomial] Running Binomial Method... 25.1%
[binomial] Running Binomial Method... 25.2%
[binomial] Running Binomial Method... 25.3%
[binomial] Running Binomial Method... 25.4%
[binomial] Running Binomial Method... 25.5%
[binomial] Running Binomial Method... 25.5%
[binomial] Running Binomial Method... 25.6%
[binomial] Running Binomial Method... 25.7%
[binomial] Running Binomial Method... 25.8%
[binomial] Running Binomial Method... 25.9%
[binomial] Running Binomial Method... 26.0%
[binomial] Running Binomial Method... 26.1%
[binomial] Running Binomial Method... 26.2%
[binomial] Running Binomial Method... 26.3%
[binomial] Running Binomial Method... 26.4%
[binomial] Running Binomial Method... 26.5%
[binomial] Running Binomial Method... 26.5%
[binomial] Running Binomial Method... 26.6%
[binomial] Running Binomial Method... 26.7%
[binomial] Running Binomial Method... 26.8%
[binomial] Running Binomial Method... 26.9%
[binomial] Running Binomial Method... 27.0%
[binomial] Running Binomial Method... 27.1%
[binomial] Running Binomial Method... 27.2%
[binomial] Running Binomial Method... 27.3%
[binomial] Running Binomial Method... 27.4%
[binomial] Running Binomial Method... 27.5%
[binomial] Running Binomial Method... 27.5%
[binomial] Running Binomial Method... 27.6%
[binomial] Running Binomial Method... 27.7%
[binomial] Running Binomial Method... 27.8%
[binomial] Running Binomial Method... 27.9%
[binomial] Running Binomial Method... 28.0%
[binomial] Running Binomial Method... 28.1%
[binomial] Running Binomial Method... 28.2%
[binomial] Running Binomial Method... 28.3%
[binomial] Running Binomial Method... 28.4%
[binomial] Running Binomial Method... 28.5%
[binomial] Running Binomial Method... 28.5%
[binomial] Running Binomial Method... 28.6%
[binomial] Running Binomial Method... 28.7%
[binomial] Running Binomial Method... 28.8%
[binomial] Running Binomial Method... 28.9%
[binomial] Running Binomial Method... 29.0%
[binomial] Running Binomial Method... 29.1%
[binomial] Running Binomial Method... 29.2%
[binomial] Running Binomial Method... 29.3%
[binomial] Running Binomial Method... 29.4%
[binomial] Running Binomial Method... 29.5%
[binomial] Running Binomial Method... 29.5%
[binomial] Running Binomial Method... 29.6%
[binomial] Running Binomial Method... 29.7%
[binomial] Running Binomial Method... 29.8%
[binomial] Running Binomial Method... 29.9%
[binomial] Running Binomial Method... 30.0%
[binomial] Running Binomial Method... 30.1%
[binomial] Running Binomial Method... 30.2%
[binomial] Running Binomial Method... 30.3%
[binomial] Running Binomial Method... 30.4%
[binomial] Running Binomial Method... 30.5%
[binomial] Running Binomial Method... 30.5%
[binomial] Running Binomial Method... 30.6%
[binomial] Running Binomial Method... 30.7%
[binomial] Running Binomial Method... 30.8%
[binomial] Running Binomial Method... 30.9%
[binomial] Running Binomial Method... 31.0%
[binomial] Running Binomial Method... 31.1%
[binomial] Running Binomial Method... 31.2%
[binomial] Running Binomial Method... 31.3%
[binomial] Running Binomial Method... 31.4%
[binomial] Running Binomial Method... 31.5%
[binomial] Running Binomial Method... 31.5%
[binomial] Running Binomial Method... 31.6%
[binomial] Running Binomial Method... 31.7%
[binomial] Running Binomial Method... 31.8%
[binomial] Running Binomial Method... 31.9%
[binomial] Running Binomial Method... 32.0%
[binomial] Running Binomial Method... 32.1%
[binomial] Running Binomial Method... 32.2%
[binomial] Running Binomial Method... 32.3%
[binomial] Running Binomial Method... 32.4%
[binomial] Running Binomial Method... 32.5%
[binomial] Running Binomial Method... 32.5%
[binomial] Running Binomial Method... 32.6%
[binomial] Running Binomial Method... 32.7%
[binomial] Running Binomial Method... 32.8%
[binomial] Running Binomial Method... 32.9%
[binomial] Running Binomial Method... 33.0%
[binomial] Running Binomial Method... 33.1%
[binomial] Running Binomial Method... 33.2%
[binomial] Running Binomial Method... 33.3%
[binomial] Running Binomial Method... 33.4%
[binomial] Running Binomial Method... 33.5%
[binomial] Running Binomial Method... 33.5%
[binomial] Running Binomial Method... 33.6%
[binomial] Running Binomial Method... 33.7%
[binomial] Running Binomial Method... 33.8%
[binomial] Running Binomial Method... 33.9%
[binomial] Running Binomial Method... 34.0%
[binomial] Running Binomial Method... 34.1%
[binomial] Running Binomial Method... 34.2%
[binomial] Running Binomial Method... 34.3%
[binomial] Running Binomial Method... 34.4%
[binomial] Running Binomial Method... 34.5%
[binomial] Running Binomial Method... 34.5%
[binomial] Running Binomial Method... 34.6%
[binomial] Running Binomial Method... 34.7%
[binomial] Running Binomial Method... 34.8%
[binomial] Running Binomial Method... 34.9%
[binomial] Running Binomial Method... 35.0%
[binomial] Running Binomial Method... 35.1%
[binomial] Running Binomial Method... 35.2%
[binomial] Running Binomial Method... 35.3%
[binomial] Running Binomial Method... 35.4%
[binomial] Running Binomial Method... 35.5%
[binomial] Running Binomial Method... 35.5%
[binomial] Running Binomial Method... 35.6%
[binomial] Running Binomial Method... 35.7%
[binomial] Running Binomial Method... 35.8%
[binomial] Running Binomial Method... 35.9%
[binomial] Running Binomial Method... 36.0%
[binomial] Running Binomial Method... 36.1%
[binomial] Running Binomial Method... 36.2%
[binomial] Running Binomial Method... 36.3%
[binomial] Running Binomial Method... 36.4%
[binomial] Running Binomial Method... 36.5%
[binomial] Running Binomial Method... 36.5%
[binomial] Running Binomial Method... 36.6%
[binomial] Running Binomial Method... 36.7%
[binomial] Running Binomial Method... 36.8%
[binomial] Running Binomial Method... 36.9%
[binomial] Running Binomial Method... 37.0%
[binomial] Running Binomial Method... 37.1%
[binomial] Running Binomial Method... 37.2%
[binomial] Running Binomial Method... 37.3%
[binomial] Running Binomial Method... 37.4%
[binomial] Running Binomial Method... 37.5%
[binomial] Running Binomial Method... 37.5%
[binomial] Running Binomial Method... 37.6%
[binomial] Running Binomial Method... 37.7%
[binomial] Running Binomial Method... 37.8%
[binomial] Running Binomial Method... 37.9%
[binomial] Running Binomial Method... 38.0%
[binomial] Running Binomial Method... 38.1%
[binomial] Running Binomial Method... 38.2%
[binomial] Running Binomial Method... 38.3%
[binomial] Running Binomial Method... 38.4%
[binomial] Running Binomial Method... 38.5%
[binomial] Running Binomial Method... 38.5%
[binomial] Running Binomial Method... 38.6%
[binomial] Running Binomial Method... 38.7%
[binomial] Running Binomial Method... 38.8%
[binomial] Running Binomial Method... 38.9%
[binomial] Running Binomial Method... 39.0%
[binomial] Running Binomial Method... 39.1%
[binomial] Running Binomial Method... 39.2%
[binomial] Running Binomial Method... 39.3%
[binomial] Running Binomial Method... 39.4%
[binomial] Running Binomial Method... 39.5%
[binomial] Running Binomial Method... 39.5%
[binomial] Running Binomial Method... 39.6%
[binomial] Running Binomial Method... 39.7%
[binomial] Running Binomial Method... 39.8%
[binomial] Running Binomial Method... 39.9%
[binomial] Running Binomial Method... 40.0%
[binomial] Running Binomial Method... 40.1%
[binomial] Running Binomial Method... 40.2%
[binomial] Running Binomial Method... 40.3%
[binomial] Running Binomial Method... 40.4%
[binomial] Running Binomial Method... 40.5%
[binomial] Running Binomial Method... 40.5%
[binomial] Running Binomial Method... 40.6%
[binomial] Running Binomial Method... 40.7%
[binomial] Running Binomial Method... 40.8%
[binomial] Running Binomial Method... 40.9%
[binomial] Running Binomial Method... 41.0%
[binomial] Running Binomial Method... 41.1%
[binomial] Running Binomial Method... 41.2%
[binomial] Running Binomial Method... 41.3%
[binomial] Running Binomial Method... 41.4%
[binomial] Running Binomial Method... 41.5%
[binomial] Running Binomial Method... 41.5%
[binomial] Running Binomial Method... 41.6%
[binomial] Running Binomial Method... 41.7%
[binomial] Running Binomial Method... 41.8%
[binomial] Running Binomial Method... 41.9%
[binomial] Running Binomial Method... 42.0%
[binomial] Running Binomial Method... 42.1%
[binomial] Running Binomial Method... 42.2%
[binomial] Running Binomial Method... 42.3%
[binomial] Running Binomial Method... 42.4%
[binomial] Running Binomial Method... 42.5%
[binomial] Running Binomial Method... 42.5%
[binomial] Running Binomial Method... 42.6%
[binomial] Running Binomial Method... 42.7%
[binomial] Running Binomial Method... 42.8%
[binomial] Running Binomial Method... 42.9%
[binomial] Running Binomial Method... 43.0%
[binomial] Running Binomial Method... 43.1%
[binomial] Running Binomial Method... 43.2%
[binomial] Running Binomial Method... 43.3%
[binomial] Running Binomial Method... 43.4%
[binomial] Running Binomial Method... 43.5%
[binomial] Running Binomial Method... 43.5%
[binomial] Running Binomial Method... 43.6%
[binomial] Running Binomial Method... 43.7%
[binomial] Running Binomial Method... 43.8%
[binomial] Running Binomial Method... 43.9%
[binomial] Running Binomial Method... 44.0%
[binomial] Running Binomial Method... 44.1%
[binomial] Running Binomial Method... 44.2%
[binomial] Running Binomial Method... 44.3%
[binomial] Running Binomial Method... 44.4%
[binomial] Running Binomial Method... 44.5%
[binomial] Running Binomial Method... 44.5%
[binomial] Running Binomial Method... 44.6%
[binomial] Running Binomial Method... 44.7%
[binomial] Running Binomial Method... 44.8%
[binomial] Running Binomial Method... 44.9%
[binomial] Running Binomial Method... 45.0%
[binomial] Running Binomial Method... 45.1%
[binomial] Running Binomial Method... 45.2%
[binomial] Running Binomial Method... 45.3%
[binomial] Running Binomial Method... 45.4%
[binomial] Running Binomial Method... 45.5%
[binomial] Running Binomial Method... 45.5%
[binomial] Running Binomial Method... 45.6%
[binomial] Running Binomial Method... 45.7%
[binomial] Running Binomial Method... 45.8%
[binomial] Running Binomial Method... 45.9%
[binomial] Running Binomial Method... 46.0%
[binomial] Running Binomial Method... 46.1%
[binomial] Running Binomial Method... 46.2%
[binomial] Running Binomial Method... 46.3%
[binomial] Running Binomial Method... 46.4%
[binomial] Running Binomial Method... 46.5%
[binomial] Running Binomial Method... 46.5%
[binomial] Running Binomial Method... 46.6%
[binomial] Running Binomial Method... 46.7%
[binomial] Running Binomial Method... 46.8%
[binomial] Running Binomial Method... 46.9%
[binomial] Running Binomial Method... 47.0%
[binomial] Running Binomial Method... 47.1%
[binomial] Running Binomial Method... 47.2%
[binomial] Running Binomial Method... 47.3%
[binomial] Running Binomial Method... 47.4%
[binomial] Running Binomial Method... 47.5%
[binomial] Running Binomial Method... 47.5%
[binomial] Running Binomial Method... 47.6%
[binomial] Running Binomial Method... 47.7%
[binomial] Running Binomial Method... 47.8%
[binomial] Running Binomial Method... 47.9%
[binomial] Running Binomial Method... 48.0%
[binomial] Running Binomial Method... 48.1%
[binomial] Running Binomial Method... 48.2%
[binomial] Running Binomial Method... 48.3%
[binomial] Running Binomial Method... 48.4%
[binomial] Running Binomial Method... 48.5%
[binomial] Running Binomial Method... 48.5%
[binomial] Running Binomial Method... 48.6%
[binomial] Running Binomial Method... 48.7%
[binomial] Running Binomial Method... 48.8%
[binomial] Running Binomial Method... 48.9%
[binomial] Running Binomial Method... 49.0%
[binomial] Running Binomial Method... 49.1%
[binomial] Running Binomial Method... 49.2%
[binomial] Running Binomial Method... 49.3%
[binomial] Running Binomial Method... 49.4%
[binomial] Running Binomial Method... 49.5%
[binomial] Running Binomial Method... 49.5%
[binomial] Running Binomial Method... 49.6%
[binomial] Running Binomial Method... 49.7%
[binomial] Running Binomial Method... 49.8%
[binomial] Running Binomial Method... 49.9%
[binomial] Running Binomial Method... 50.0%
[binomial] Running Binomial Method... 50.1%
[binomial] Running Binomial Method... 50.2%
[binomial] Running Binomial Method... 50.3%
[binomial] Running Binomial Method... 50.4%
[binomial] Running Binomial Method... 50.5%
[binomial] Running Binomial Method... 50.5%
[binomial] Running Binomial Method... 50.6%
[binomial] Running Binomial Method... 50.7%
[binomial] Running Binomial Method... 50.8%
[binomial] Running Binomial Method... 50.9%
[binomial] Running Binomial Method... 51.0%
[binomial] Running Binomial Method... 51.1%
[binomial] Running Binomial Method... 51.2%
[binomial] Running Binomial Method... 51.3%
[binomial] Running Binomial Method... 51.4%
[binomial] Running Binomial Method... 51.5%
[binomial] Running Binomial Method... 51.5%
[binomial] Running Binomial Method... 51.6%
[binomial] Running Binomial Method... 51.7%
[binomial] Running Binomial Method... 51.8%
[binomial] Running Binomial Method... 51.9%
[binomial] Running Binomial Method... 52.0%
[binomial] Running Binomial Method... 52.1%
[binomial] Running Binomial Method... 52.2%
[binomial] Running Binomial Method... 52.3%
[binomial] Running Binomial Method... 52.4%
[binomial] Running Binomial Method... 52.5%
[binomial] Running Binomial Method... 52.5%
[binomial] Running Binomial Method... 52.6%
[binomial] Running Binomial Method... 52.7%
[binomial] Running Binomial Method... 52.8%
[binomial] Running Binomial Method... 52.9%
[binomial] Running Binomial Method... 53.0%
[binomial] Running Binomial Method... 53.1%
[binomial] Running Binomial Method... 53.2%
[binomial] Running Binomial Method... 53.3%
[binomial] Running Binomial Method... 53.4%
[binomial] Running Binomial Method... 53.5%
[binomial] Running Binomial Method... 53.5%
[binomial] Running Binomial Method... 53.6%
[binomial] Running Binomial Method... 53.7%
[binomial] Running Binomial Method... 53.8%
[binomial] Running Binomial Method... 53.9%
[binomial] Running Binomial Method... 54.0%
[binomial] Running Binomial Method... 54.1%
[binomial] Running Binomial Method... 54.2%
[binomial] Running Binomial Method... 54.3%
[binomial] Running Binomial Method... 54.4%
[binomial] Running Binomial Method... 54.5%
[binomial] Running Binomial Method... 54.5%
[binomial] Running Binomial Method... 54.6%
[binomial] Running Binomial Method... 54.7%
[binomial] Running Binomial Method... 54.8%
[binomial] Running Binomial Method... 54.9%
[binomial] Running Binomial Method... 55.0%
[binomial] Running Binomial Method... 55.1%
[binomial] Running Binomial Method... 55.2%
[binomial] Running Binomial Method... 55.3%
[binomial] Running Binomial Method... 55.4%
[binomial] Running Binomial Method... 55.5%
[binomial] Running Binomial Method... 55.5%
[binomial] Running Binomial Method... 55.6%
[binomial] Running Binomial Method... 55.7%
[binomial] Running Binomial Method... 55.8%
[binomial] Running Binomial Method... 55.9%
[binomial] Running Binomial Method... 56.0%
[binomial] Running Binomial Method... 56.1%
[binomial] Running Binomial Method... 56.2%
[binomial] Running Binomial Method... 56.3%
[binomial] Running Binomial Method... 56.4%
[binomial] Running Binomial Method... 56.5%
[binomial] Running Binomial Method... 56.5%
[binomial] Running Binomial Method... 56.6%
[binomial] Running Binomial Method... 56.7%
[binomial] Running Binomial Method... 56.8%
[binomial] Running Binomial Method... 56.9%
[binomial] Running Binomial Method... 57.0%
[binomial] Running Binomial Method... 57.1%
[binomial] Running Binomial Method... 57.2%
[binomial] Running Binomial Method... 57.3%
[binomial] Running Binomial Method... 57.4%
[binomial] Running Binomial Method... 57.5%
[binomial] Running Binomial Method... 57.5%
[binomial] Running Binomial Method... 57.6%
[binomial] Running Binomial Method... 57.7%
[binomial] Running Binomial Method... 57.8%
[binomial] Running Binomial Method... 57.9%
[binomial] Running Binomial Method... 58.0%
[binomial] Running Binomial Method... 58.1%
[binomial] Running Binomial Method... 58.2%
[binomial] Running Binomial Method... 58.3%
[binomial] Running Binomial Method... 58.4%
[binomial] Running Binomial Method... 58.5%
[binomial] Running Binomial Method... 58.5%
[binomial] Running Binomial Method... 58.6%
[binomial] Running Binomial Method... 58.7%
[binomial] Running Binomial Method... 58.8%
[binomial] Running Binomial Method... 58.9%
[binomial] Running Binomial Method... 59.0%
[binomial] Running Binomial Method... 59.1%
[binomial] Running Binomial Method... 59.2%
[binomial] Running Binomial Method... 59.3%
[binomial] Running Binomial Method... 59.4%
[binomial] Running Binomial Method... 59.5%
[binomial] Running Binomial Method... 59.5%
[binomial] Running Binomial Method... 59.6%
[binomial] Running Binomial Method... 59.7%
[binomial] Running Binomial Method... 59.8%
[binomial] Running Binomial Method... 59.9%
[binomial] Running Binomial Method... 60.0%
[binomial] Running Binomial Method... 60.1%
[binomial] Running Binomial Method... 60.2%
[binomial] Running Binomial Method... 60.3%
[binomial] Running Binomial Method... 60.4%
[binomial] Running Binomial Method... 60.5%
[binomial] Running Binomial Method... 60.5%
[binomial] Running Binomial Method... 60.6%
[binomial] Running Binomial Method... 60.7%
[binomial] Running Binomial Method... 60.8%
[binomial] Running Binomial Method... 60.9%
[binomial] Running Binomial Method... 61.0%
[binomial] Running Binomial Method... 61.1%
[binomial] Running Binomial Method... 61.2%
[binomial] Running Binomial Method... 61.3%
[binomial] Running Binomial Method... 61.4%
[binomial] Running Binomial Method... 61.5%
[binomial] Running Binomial Method... 61.5%
[binomial] Running Binomial Method... 61.6%
[binomial] Running Binomial Method... 61.7%
[binomial] Running Binomial Method... 61.8%
[binomial] Running Binomial Method... 61.9%
[binomial] Running Binomial Method... 62.0%
[binomial] Running Binomial Method... 62.1%
[binomial] Running Binomial Method... 62.2%
[binomial] Running Binomial Method... 62.3%
[binomial] Running Binomial Method... 62.4%
[binomial] Running Binomial Method... 62.5%
[binomial] Running Binomial Method... 62.5%
[binomial] Running Binomial Method... 62.6%
[binomial] Running Binomial Method... 62.7%
[binomial] Running Binomial Method... 62.8%
[binomial] Running Binomial Method... 62.9%
[binomial] Running Binomial Method... 63.0%
[binomial] Running Binomial Method... 63.1%
[binomial] Running Binomial Method... 63.2%
[binomial] Running Binomial Method... 63.3%
[binomial] Running Binomial Method... 63.4%
[binomial] Running Binomial Method... 63.5%
[binomial] Running Binomial Method... 63.5%
[binomial] Running Binomial Method... 63.6%
[binomial] Running Binomial Method... 63.7%
[binomial] Running Binomial Method... 63.8%
[binomial] Running Binomial Method... 63.9%
[binomial] Running Binomial Method... 64.0%
[binomial] Running Binomial Method... 64.1%
[binomial] Running Binomial Method... 64.2%
[binomial] Running Binomial Method... 64.3%
[binomial] Running Binomial Method... 64.4%
[binomial] Running Binomial Method... 64.5%
[binomial] Running Binomial Method... 64.5%
[binomial] Running Binomial Method... 64.6%
[binomial] Running Binomial Method... 64.7%
[binomial] Running Binomial Method... 64.8%
[binomial] Running Binomial Method... 64.9%
[binomial] Running Binomial Method... 65.0%
[binomial] Running Binomial Method... 65.1%
[binomial] Running Binomial Method... 65.2%
[binomial] Running Binomial Method... 65.3%
[binomial] Running Binomial Method... 65.4%
[binomial] Running Binomial Method... 65.5%
[binomial] Running Binomial Method... 65.5%
[binomial] Running Binomial Method... 65.6%
[binomial] Running Binomial Method... 65.7%
[binomial] Running Binomial Method... 65.8%
[binomial] Running Binomial Method... 65.9%
[binomial] Running Binomial Method... 66.0%
[binomial] Running Binomial Method... 66.1%
[binomial] Running Binomial Method... 66.2%
[binomial] Running Binomial Method... 66.3%
[binomial] Running Binomial Method... 66.4%
[binomial] Running Binomial Method... 66.5%
[binomial] Running Binomial Method... 66.5%
[binomial] Running Binomial Method... 66.6%
[binomial] Running Binomial Method... 66.7%
[binomial] Running Binomial Method... 66.8%
[binomial] Running Binomial Method... 66.9%
[binomial] Running Binomial Method... 67.0%
[binomial] Running Binomial Method... 67.1%
[binomial] Running Binomial Method... 67.2%
[binomial] Running Binomial Method... 67.3%
[binomial] Running Binomial Method... 67.4%
[binomial] Running Binomial Method... 67.5%
[binomial] Running Binomial Method... 67.5%
[binomial] Running Binomial Method... 67.6%
[binomial] Running Binomial Method... 67.7%
[binomial] Running Binomial Method... 67.8%
[binomial] Running Binomial Method... 67.9%
[binomial] Running Binomial Method... 68.0%
[binomial] Running Binomial Method... 68.1%
[binomial] Running Binomial Method... 68.2%
[binomial] Running Binomial Method... 68.3%
[binomial] Running Binomial Method... 68.4%
[binomial] Running Binomial Method... 68.5%
[binomial] Running Binomial Method... 68.5%
[binomial] Running Binomial Method... 68.6%
[binomial] Running Binomial Method... 68.7%
[binomial] Running Binomial Method... 68.8%
[binomial] Running Binomial Method... 68.9%
[binomial] Running Binomial Method... 69.0%
[binomial] Running Binomial Method... 69.1%
[binomial] Running Binomial Method... 69.2%
[binomial] Running Binomial Method... 69.3%
[binomial] Running Binomial Method... 69.4%
[binomial] Running Binomial Method... 69.5%
[binomial] Running Binomial Method... 69.5%
[binomial] Running Binomial Method... 69.6%
[binomial] Running Binomial Method... 69.7%
[binomial] Running Binomial Method... 69.8%
[binomial] Running Binomial Method... 69.9%
[binomial] Running Binomial Method... 70.0%
[binomial] Running Binomial Method... 70.1%
[binomial] Running Binomial Method... 70.2%
[binomial] Running Binomial Method... 70.3%
[binomial] Running Binomial Method... 70.4%
[binomial] Running Binomial Method... 70.5%
[binomial] Running Binomial Method... 70.5%
[binomial] Running Binomial Method... 70.6%
[binomial] Running Binomial Method... 70.7%
[binomial] Running Binomial Method... 70.8%
[binomial] Running Binomial Method... 70.9%
[binomial] Running Binomial Method... 71.0%
[binomial] Running Binomial Method... 71.1%
[binomial] Running Binomial Method... 71.2%
[binomial] Running Binomial Method... 71.3%
[binomial] Running Binomial Method... 71.4%
[binomial] Running Binomial Method... 71.5%
[binomial] Running Binomial Method... 71.5%
[binomial] Running Binomial Method... 71.6%
[binomial] Running Binomial Method... 71.7%
[binomial] Running Binomial Method... 71.8%
[binomial] Running Binomial Method... 71.9%
[binomial] Running Binomial Method... 72.0%
[binomial] Running Binomial Method... 72.1%
[binomial] Running Binomial Method... 72.2%
[binomial] Running Binomial Method... 72.3%
[binomial] Running Binomial Method... 72.4%
[binomial] Running Binomial Method... 72.5%
[binomial] Running Binomial Method... 72.5%
[binomial] Running Binomial Method... 72.6%
[binomial] Running Binomial Method... 72.7%
[binomial] Running Binomial Method... 72.8%
[binomial] Running Binomial Method... 72.9%
[binomial] Running Binomial Method... 73.0%
[binomial] Running Binomial Method... 73.1%
[binomial] Running Binomial Method... 73.2%
[binomial] Running Binomial Method... 73.3%
[binomial] Running Binomial Method... 73.4%
[binomial] Running Binomial Method... 73.5%
[binomial] Running Binomial Method... 73.5%
[binomial] Running Binomial Method... 73.6%
[binomial] Running Binomial Method... 73.7%
[binomial] Running Binomial Method... 73.8%
[binomial] Running Binomial Method... 73.9%
[binomial] Running Binomial Method... 74.0%
[binomial] Running Binomial Method... 74.1%
[binomial] Running Binomial Method... 74.2%
[binomial] Running Binomial Method... 74.3%
[binomial] Running Binomial Method... 74.4%
[binomial] Running Binomial Method... 74.5%
[binomial] Running Binomial Method... 74.5%
[binomial] Running Binomial Method... 74.6%
[binomial] Running Binomial Method... 74.7%
[binomial] Running Binomial Method... 74.8%
[binomial] Running Binomial Method... 74.9%
[binomial] Running Binomial Method... 75.0%
[binomial] Running Binomial Method... 75.1%
[binomial] Running Binomial Method... 75.2%
[binomial] Running Binomial Method... 75.3%
[binomial] Running Binomial Method... 75.4%
[binomial] Running Binomial Method... 75.5%
[binomial] Running Binomial Method... 75.5%
[binomial] Running Binomial Method... 75.6%
[binomial] Running Binomial Method... 75.7%
[binomial] Running Binomial Method... 75.8%
[binomial] Running Binomial Method... 75.9%
[binomial] Running Binomial Method... 76.0%
[binomial] Running Binomial Method... 76.1%
[binomial] Running Binomial Method... 76.2%
[binomial] Running Binomial Method... 76.3%
[binomial] Running Binomial Method... 76.4%
[binomial] Running Binomial Method... 76.5%
[binomial] Running Binomial Method... 76.5%
[binomial] Running Binomial Method... 76.6%
[binomial] Running Binomial Method... 76.7%
[binomial] Running Binomial Method... 76.8%
[binomial] Running Binomial Method... 76.9%
[binomial] Running Binomial Method... 77.0%
[binomial] Running Binomial Method... 77.1%
[binomial] Running Binomial Method... 77.2%
[binomial] Running Binomial Method... 77.3%
[binomial] Running Binomial Method... 77.4%
[binomial] Running Binomial Method... 77.5%
[binomial] Running Binomial Method... 77.5%
[binomial] Running Binomial Method... 77.6%
[binomial] Running Binomial Method... 77.7%
[binomial] Running Binomial Method... 77.8%
[binomial] Running Binomial Method... 77.9%
[binomial] Running Binomial Method... 78.0%
[binomial] Running Binomial Method... 78.1%
[binomial] Running Binomial Method... 78.2%
[binomial] Running Binomial Method... 78.3%
[binomial] Running Binomial Method... 78.4%
[binomial] Running Binomial Method... 78.5%
[binomial] Running Binomial Method... 78.5%
[binomial] Running Binomial Method... 78.6%
[binomial] Running Binomial Method... 78.7%
[binomial] Running Binomial Method... 78.8%
[binomial] Running Binomial Method... 78.9%
[binomial] Running Binomial Method... 79.0%
[binomial] Running Binomial Method... 79.1%
[binomial] Running Binomial Method... 79.2%
[binomial] Running Binomial Method... 79.3%
[binomial] Running Binomial Method... 79.4%
[binomial] Running Binomial Method... 79.5%
[binomial] Running Binomial Method... 79.5%
[binomial] Running Binomial Method... 79.6%
[binomial] Running Binomial Method... 79.7%
[binomial] Running Binomial Method... 79.8%
[binomial] Running Binomial Method... 79.9%
[binomial] Running Binomial Method... 80.0%
[binomial] Running Binomial Method... 80.1%
[binomial] Running Binomial Method... 80.2%
[binomial] Running Binomial Method... 80.3%
[binomial] Running Binomial Method... 80.4%
[binomial] Running Binomial Method... 80.5%
[binomial] Running Binomial Method... 80.5%
[binomial] Running Binomial Method... 80.6%
[binomial] Running Binomial Method... 80.7%
[binomial] Running Binomial Method... 80.8%
[binomial] Running Binomial Method... 80.9%
[binomial] Running Binomial Method... 81.0%
[binomial] Running Binomial Method... 81.1%
[binomial] Running Binomial Method... 81.2%
[binomial] Running Binomial Method... 81.3%
[binomial] Running Binomial Method... 81.4%
[binomial] Running Binomial Method... 81.5%
[binomial] Running Binomial Method... 81.5%
[binomial] Running Binomial Method... 81.6%
[binomial] Running Binomial Method... 81.7%
[binomial] Running Binomial Method... 81.8%
[binomial] Running Binomial Method... 81.9%
[binomial] Running Binomial Method... 82.0%
[binomial] Running Binomial Method... 82.1%
[binomial] Running Binomial Method... 82.2%
[binomial] Running Binomial Method... 82.3%
[binomial] Running Binomial Method... 82.4%
[binomial] Running Binomial Method... 82.5%
[binomial] Running Binomial Method... 82.5%
[binomial] Running Binomial Method... 82.6%
[binomial] Running Binomial Method... 82.7%
[binomial] Running Binomial Method... 82.8%
[binomial] Running Binomial Method... 82.9%
[binomial] Running Binomial Method... 83.0%
[binomial] Running Binomial Method... 83.1%
[binomial] Running Binomial Method... 83.2%
[binomial] Running Binomial Method... 83.3%
[binomial] Running Binomial Method... 83.4%
[binomial] Running Binomial Method... 83.5%
[binomial] Running Binomial Method... 83.5%
[binomial] Running Binomial Method... 83.6%
[binomial] Running Binomial Method... 83.7%
[binomial] Running Binomial Method... 83.8%
[binomial] Running Binomial Method... 83.9%
[binomial] Running Binomial Method... 84.0%
[binomial] Running Binomial Method... 84.1%
[binomial] Running Binomial Method... 84.2%
[binomial] Running Binomial Method... 84.3%
[binomial] Running Binomial Method... 84.4%
[binomial] Running Binomial Method... 84.5%
[binomial] Running Binomial Method... 84.5%
[binomial] Running Binomial Method... 84.6%
[binomial] Running Binomial Method... 84.7%
[binomial] Running Binomial Method... 84.8%
[binomial] Running Binomial Method... 84.9%
[binomial] Running Binomial Method... 85.0%
[binomial] Running Binomial Method... 85.1%
[binomial] Running Binomial Method... 85.2%
[binomial] Running Binomial Method... 85.3%
[binomial] Running Binomial Method... 85.4%
[binomial] Running Binomial Method... 85.5%
[binomial] Running Binomial Method... 85.5%
[binomial] Running Binomial Method... 85.6%
[binomial] Running Binomial Method... 85.7%
[binomial] Running Binomial Method... 85.8%
[binomial] Running Binomial Method... 85.9%
[binomial] Running Binomial Method... 86.0%
[binomial] Running Binomial Method... 86.1%
[binomial] Running Binomial Method... 86.2%
[binomial] Running Binomial Method... 86.3%
[binomial] Running Binomial Method... 86.4%
[binomial] Running Binomial Method... 86.5%
[binomial] Running Binomial Method... 86.5%
[binomial] Running Binomial Method... 86.6%
[binomial] Running Binomial Method... 86.7%
[binomial] Running Binomial Method... 86.8%
[binomial] Running Binomial Method... 86.9%
[binomial] Running Binomial Method... 87.0%
[binomial] Running Binomial Method... 87.1%
[binomial] Running Binomial Method... 87.2%
[binomial] Running Binomial Method... 87.3%
[binomial] Running Binomial Method... 87.4%
[binomial] Running Binomial Method... 87.5%
[binomial] Running Binomial Method... 87.5%
[binomial] Running Binomial Method... 87.6%
[binomial] Running Binomial Method... 87.7%
[binomial] Running Binomial Method... 87.8%
[binomial] Running Binomial Method... 87.9%
[binomial] Running Binomial Method... 88.0%
[binomial] Running Binomial Method... 88.1%
[binomial] Running Binomial Method... 88.2%
[binomial] Running Binomial Method... 88.3%
[binomial] Running Binomial Method... 88.4%
[binomial] Running Binomial Method... 88.5%
[binomial] Running Binomial Method... 88.5%
[binomial] Running Binomial Method... 88.6%
[binomial] Running Binomial Method... 88.7%
[binomial] Running Binomial Method... 88.8%
[binomial] Running Binomial Method... 88.9%
[binomial] Running Binomial Method... 89.0%
[binomial] Running Binomial Method... 89.1%
[binomial] Running Binomial Method... 89.2%
[binomial] Running Binomial Method... 89.3%
[binomial] Running Binomial Method... 89.4%
[binomial] Running Binomial Method... 89.5%
[binomial] Running Binomial Method... 89.5%
[binomial] Running Binomial Method... 89.6%
[binomial] Running Binomial Method... 89.7%
[binomial] Running Binomial Method... 89.8%
[binomial] Running Binomial Method... 89.9%
[binomial] Running Binomial Method... 90.0%
[binomial] Running Binomial Method... 90.1%
[binomial] Running Binomial Method... 90.2%
[binomial] Running Binomial Method... 90.3%
[binomial] Running Binomial Method... 90.4%
[binomial] Running Binomial Method... 90.5%
[binomial] Running Binomial Method... 90.5%
[binomial] Running Binomial Method... 90.6%
[binomial] Running Binomial Method... 90.7%
[binomial] Running Binomial Method... 90.8%
[binomial] Running Binomial Method... 90.9%
[binomial] Running Binomial Method... 91.0%
[binomial] Running Binomial Method... 91.1%
[binomial] Running Binomial Method... 91.2%
[binomial] Running Binomial Method... 91.3%
[binomial] Running Binomial Method... 91.4%
[binomial] Running Binomial Method... 91.5%
[binomial] Running Binomial Method... 91.5%
[binomial] Running Binomial Method... 91.6%
[binomial] Running Binomial Method... 91.7%
[binomial] Running Binomial Method... 91.8%
[binomial] Running Binomial Method... 91.9%
[binomial] Running Binomial Method... 92.0%
[binomial] Running Binomial Method... 92.1%
[binomial] Running Binomial Method... 92.2%
[binomial] Running Binomial Method... 92.3%
[binomial] Running Binomial Method... 92.4%
[binomial] Running Binomial Method... 92.5%
[binomial] Running Binomial Method... 92.5%
[binomial] Running Binomial Method... 92.6%
[binomial] Running Binomial Method... 92.7%
[binomial] Running Binomial Method... 92.8%
[binomial] Running Binomial Method... 92.9%
[binomial] Running Binomial Method... 93.0%
[binomial] Running Binomial Method... 93.1%
[binomial] Running Binomial Method... 93.2%
[binomial] Running Binomial Method... 93.3%
[binomial] Running Binomial Method... 93.4%
[binomial] Running Binomial Method... 93.5%
[binomial] Running Binomial Method... 93.5%
[binomial] Running Binomial Method... 93.6%
[binomial] Running Binomial Method... 93.7%
[binomial] Running Binomial Method... 93.8%
[binomial] Running Binomial Method... 93.9%
[binomial] Running Binomial Method... 94.0%
[binomial] Running Binomial Method... 94.1%
[binomial] Running Binomial Method... 94.2%
[binomial] Running Binomial Method... 94.3%
[binomial] Running Binomial Method... 94.4%
[binomial] Running Binomial Method... 94.5%
[binomial] Running Binomial Method... 94.5%
[binomial] Running Binomial Method... 94.6%
[binomial] Running Binomial Method... 94.7%
[binomial] Running Binomial Method... 94.8%
[binomial] Running Binomial Method... 94.9%
[binomial] Running Binomial Method... 95.0%
[binomial] Running Binomial Method... 95.1%
[binomial] Running Binomial Method... 95.2%
[binomial] Running Binomial Method... 95.3%
[binomial] Running Binomial Method... 95.4%
[binomial] Running Binomial Method... 95.5%
[binomial] Running Binomial Method... 95.5%
[binomial] Running Binomial Method... 95.6%
[binomial] Running Binomial Method... 95.7%
[binomial] Running Binomial Method... 95.8%
[binomial] Running Binomial Method... 95.9%
[binomial] Running Binomial Method... 96.0%
[binomial] Running Binomial Method... 96.1%
[binomial] Running Binomial Method... 96.2%
[binomial] Running Binomial Method... 96.3%
[binomial] Running Binomial Method... 96.4%
[binomial] Running Binomial Method... 96.5%
[binomial] Running Binomial Method... 96.5%
[binomial] Running Binomial Method... 96.6%
[binomial] Running Binomial Method... 96.7%
[binomial] Running Binomial Method... 96.8%
[binomial] Running Binomial Method... 96.9%
[binomial] Running Binomial Method... 97.0%
[binomial] Running Binomial Method... 97.1%
[binomial] Running Binomial Method... 97.2%
[binomial] Running Binomial Method... 97.3%
[binomial] Running Binomial Method... 97.4%
[binomial] Running Binomial Method... 97.5%
[binomial] Running Binomial Method... 97.5%
[binomial] Running Binomial Method... 97.6%
[binomial] Running Binomial Method... 97.7%
[binomial] Running Binomial Method... 97.8%
[binomial] Running Binomial Method... 97.9%
[binomial] Running Binomial Method... 98.0%
[binomial] Running Binomial Method... 98.1%
[binomial] Running Binomial Method... 98.2%
[binomial] Running Binomial Method... 98.3%
[binomial] Running Binomial Method... 98.4%
[binomial] Running Binomial Method... 98.5%
[binomial] Running Binomial Method... 98.5%
[binomial] Running Binomial Method... 98.6%
[binomial] Running Binomial Method... 98.7%
[binomial] Running Binomial Method... 98.8%
[binomial] Running Binomial Method... 98.9%
[binomial] Running Binomial Method... 99.0%
[binomial] Running Binomial Method... 99.1%
[binomial] Running Binomial Method... 99.2%
[binomial] Running Binomial Method... 99.3%
[binomial] Running Binomial Method... 99.4%
[binomial] Running Binomial Method... 99.5%
[binomial] Running Binomial Method... 99.5%
[binomial] Running Binomial Method... 99.6%
[binomial] Running Binomial Method... 99.7%
[binomial] Running Binomial Method... 99.8%
[binomial] Running Binomial Method... 99.9%
[binomial] Running Binomial Method... 100.0%
ok
test_GI (tests.test_analysis_methods.TestMethods.test_GI) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[binomial]
[binomial] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt
[binomial] Finished Binomial Method
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_GI
####################
[gi] Starting Genetic Interactions Method
[gi] Getting Data
[gi] Normalizing using: TTR
[gi] Running GI Method... 2%
[gi] analyzing Rv0244c (0.0% done)
[gi] Running GI Method... 4%
[gi] analyzing Rv0362 (2.0% done)
[gi] Running GI Method... 6%
[gi] analyzing Rv0450c (4.0% done)
[gi] Running GI Method... 8%
[gi] analyzing Rv0485 (6.0% done)
[gi] Running GI Method... 10%
[gi] analyzing Rv0694 (8.0% done)
[gi] Running GI Method... 12%
[gi] analyzing Rv0761c (10.0% done)
[gi] Running GI Method... 14%
[gi] analyzing Rv1129c (12.0% done)
[gi] Running GI Method... 16%
[gi] analyzing Rv1130 (14.0% done)
[gi] Running GI Method... 18%
[gi] analyzing Rv1183 (16.0% done)
[gi] Running GI Method... 20%
[gi] analyzing Rv1428c (18.0% done)
[gi] Running GI Method... 22%
[gi] analyzing Rv3200c (20.0% done)
[gi] Running GI Method... 24%
[gi] analyzing Rv3559c (22.0% done)
[gi] Running GI Method... 25%
[gi] analyzing Rv3564 (24.0% done)
[gi] Running GI Method... 27%
[gi] analyzing Rv3575c (26.0% done)
[gi] Running GI Method... 29%
[gi] analyzing Rv0381c (28.0% done)
[gi] Running GI Method... 31%
[gi] analyzing Rv1432 (30.0% done)
[gi] Running GI Method... 33%
[gi] analyzing Rv3543c (32.0% done)
[gi] Running GI Method... 35%
[gi] analyzing Rv3570c (34.0% done)
[gi] Running GI Method... 37%
[gi] analyzing Rv0495c (36.0% done)
[gi] Running GI Method... 39%
[gi] analyzing Rv0805 (38.0% done)
[gi] Running GI Method... 41%
[gi] analyzing Rvnr01 (40.0% done)
[gi] Running GI Method... 43%
[gi] analyzing Rv3924c (42.0% done)
[gi] Running GI Method... 45%
[gi] analyzing Rv3923c (44.0% done)
[gi] Running GI Method... 47%
[gi] analyzing Rv3922c (46.0% done)
[gi] Running GI Method... 49%
[gi] analyzing Rv3921c (48.0% done)
[gi] Running GI Method... 51%
[gi] analyzing Rv3920c (50.0% done)
[gi] Running GI Method... 53%
[gi] analyzing Rv3918c (52.0% done)
[gi] Running GI Method... 55%
[gi] analyzing Rv3917c (54.0% done)
[gi] Running GI Method... 57%
[gi] analyzing Rv3916c (56.0% done)
[gi] Running GI Method... 59%
[gi] analyzing Rv3915 (58.0% done)
[gi] Running GI Method... 61%
[gi] analyzing Rv1132 (60.0% done)
[gi] Running GI Method... 63%
[gi] analyzing Rv0499 (62.0% done)
[gi] Running GI Method... 65%
[gi] analyzing Rv2190c (64.0% done)
[gi] Running GI Method... 67%
[gi] analyzing Rv2207 (66.0% done)
[gi] Running GI Method... 69%
[gi] analyzing Rv2347c (68.0% done)
[gi] Running GI Method... 71%
[gi] analyzing Rv2567 (70.0% done)
[gi] Running GI Method... 73%
[gi] analyzing Rv2887 (72.0% done)
[gi] Running GI Method... 75%
[gi] analyzing Rv3005c (74.0% done)
[gi] Running GI Method... 76%
[gi] analyzing Rv1111c (76.0% done)
[gi] Running GI Method... 78%
[gi] analyzing Rv1072 (78.0% done)
[gi] Running GI Method... 80%
[gi] analyzing Rv2958c (80.0% done)
[gi] Running GI Method... 82%
[gi] analyzing Rv3552 (82.0% done)
[gi] Running GI Method... 84%
[gi] analyzing Rv0129c (84.0% done)
[gi] Running GI Method... 86%
[gi] analyzing Rv1821 (86.0% done)
[gi] Running GI Method... 88%
[gi] analyzing Rv2224c (88.0% done)
[gi] Running GI Method... 90%
[gi] analyzing Rv3567c (90.0% done)
[gi] Running GI Method... 92%
[gi] analyzing Rv0924c (92.0% done)
[gi] Running GI Method... 94%
[gi] analyzing Rv0249c (94.0% done)
[gi] Running GI Method... 96%
[gi] analyzing Rv2021c (96.0% done)
[gi] Running GI Method... 98%
[gi] analyzing Rv2694c (98.0% done)
[gi] Running GI Method... 100%
/usr/lib/python3.11/unittest/case.py:579: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/testoutput.txt' mode='w' encoding='UTF-8'>
if method() is not None:
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_Griffin (tests.test_analysis_methods.TestMethods.test_Griffin) ... [gi] analyzing Rv3586 (100.0% done)
[gi] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt
[gi] Finished Genetic Interactions Method
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_Griffin
####################
[griffin] Starting Griffin Method
[griffin] Getting Data
[griffin] Running Griffin Method... 2.0%
[griffin] Running Griffin Method... 3.9%
[griffin] Running Griffin Method... 5.9%
[griffin] Running Griffin Method... 7.8%
[griffin] Running Griffin Method... 9.8%
[griffin] Running Griffin Method... 11.8%
[griffin] Running Griffin Method... 13.7%
[griffin] Running Griffin Method... 15.7%
[griffin] Running Griffin Method... 17.6%
[griffin] Running Griffin Method... 19.6%
[griffin] Running Griffin Method... 21.6%
[griffin] Running Griffin Method... 23.5%
[griffin] Running Griffin Method... 25.5%
[griffin] Running Griffin Method... 27.5%
[griffin] Running Griffin Method... 29.4%
[griffin] Running Griffin Method... 31.4%
[griffin] Running Griffin Method... 33.3%
[griffin] Running Griffin Method... 35.3%
[griffin] Running Griffin Method... 37.3%
[griffin] Running Griffin Method... 39.2%
[griffin] Running Griffin Method... 41.2%
[griffin] Running Griffin Method... 43.1%
[griffin] Running Griffin Method... 45.1%
[griffin] Running Griffin Method... 47.1%
[griffin] Running Griffin Method... 49.0%
[griffin] Running Griffin Method... 51.0%
[griffin] Running Griffin Method... 52.9%
[griffin] Running Griffin Method... 54.9%
[griffin] Running Griffin Method... 56.9%
[griffin] Running Griffin Method... 58.8%
[griffin] Running Griffin Method... 60.8%
[griffin] Running Griffin Method... 62.7%
[griffin] Running Griffin Method... 64.7%
[griffin] Running Griffin Method... 66.7%
[griffin] Running Griffin Method... 68.6%
[griffin] Running Griffin Method... 70.6%
[griffin] Running Griffin Method... 72.5%
[griffin] Running Griffin Method... 74.5%
[griffin] Running Griffin Method... 76.5%
[griffin] Running Griffin Method... 78.4%
[griffin] Running Griffin Method... 80.4%
[griffin] Running Griffin Method... 82.4%
[griffin] Running Griffin Method... 84.3%
[griffin] Running Griffin Method... 86.3%
[griffin] Running Griffin Method... 88.2%
[griffin] Running Griffin Method... 90.2%
[griffin] Running Griffin Method... 92.2%
[griffin] Running Griffin Method... 94.1%
[griffin] Running Griffin Method... 96.1%
[griffin] Running Griffin Method... 98.0%
[griffin] Running Griffin Method... 100.0%
ok
test_Gumbel (tests.test_analysis_methods.TestMethods.test_Gumbel) ... [griffin]
[griffin] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt
[griffin] Finished Griffin Method
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_Gumbel
####################
[gumbel] Reading Annotation
[gumbel] Getting Data
[gumbel] Doing Regression
[gumbel] Setting Initial Class
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 0.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 1.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 2.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 3.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 4.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 5.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 6.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 7.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 8.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 9.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 10.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 11.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 12.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 13.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 14.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 15.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 16.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 17.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 18.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 19.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 20.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 21.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 22.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 23.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 24.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 25.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 26.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 27.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 28.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 29.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 30.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 31.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 32.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 33.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 34.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 35.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 36.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 37.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 38.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 39.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 40.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 41.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 42.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 43.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 44.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 45.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 46.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 47.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 48.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 49.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 50.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 51.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 52.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 53.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 54.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 55.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 56.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 57.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 58.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 59.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 60.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 61.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 62.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 63.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 64.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 65.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 66.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 67.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 68.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 69.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 70.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 71.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 72.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 73.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 74.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 75.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 76.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 77.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 78.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 79.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 80.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 81.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 82.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 83.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 84.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 85.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 86.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 87.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 88.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 89.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 90.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 91.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 92.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 93.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 94.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 95.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 96.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 97.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 98.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.0%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.1%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.2%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.3%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.4%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.5%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.6%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.7%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.8%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 99.9%
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 100.0%
ok
test_HMM (tests.test_analysis_methods.TestMethods.test_HMM) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/analysis/hmm.py:194: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.wig' mode='r' encoding='UTF-8'>
T = len([1 for line in open(ctrldata[0]).readlines() if not line.startswith("#")])
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[gumbel]
[gumbel] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt
[gumbel] Finished Gumbel Method
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_HMM
####################
[hmm] Starting HMM Method
[hmm] Getting Data
[hmm] Normalizing using: TTR
[hmm] Running HMM Method... 2.5%
[hmm] Running HMM Method... 5.0%
[hmm] Running HMM Method... 7.5%
[hmm] Running HMM Method... 10.0%
[hmm] Running HMM Method... 12.5%
[hmm] Running HMM Method... 15.0%
[hmm] Running HMM Method... 17.5%
[hmm] Running HMM Method... 20.0%
[hmm] Running HMM Method... 22.5%
[hmm] Running HMM Method... 25.0%
[hmm] Running HMM Method... 27.5%
[hmm] Running HMM Method... 30.0%
[hmm] Running HMM Method... 32.5%
[hmm] Running HMM Method... 35.0%
[hmm] Running HMM Method... 37.5%
[hmm] Running HMM Method... 40.0%
[hmm] Running HMM Method... 42.5%
[hmm] Running HMM Method... 45.0%
[hmm] Running HMM Method... 47.5%
[hmm] Running HMM Method... 50.0%
[hmm] Running HMM Method... 50.0%
[hmm] Running HMM Method... 52.5%
[hmm] Running HMM Method... 55.0%
[hmm] Running HMM Method... 57.5%
[hmm] Running HMM Method... 60.0%
[hmm] Running HMM Method... 62.5%
[hmm] Running HMM Method... 65.0%
[hmm] Running HMM Method... 67.5%
[hmm] Running HMM Method... 70.0%
[hmm] Running HMM Method... 72.5%
[hmm] Running HMM Method... 75.0%
[hmm] Running HMM Method... 77.5%
[hmm] Running HMM Method... 80.0%
[hmm] Running HMM Method... 82.5%
[hmm] Running HMM Method... 85.0%
[hmm] Running HMM Method... 87.5%
[hmm] Running HMM Method... 90.0%
[hmm] Running HMM Method... 92.5%
[hmm] Running HMM Method... 95.0%
[hmm] Running HMM Method... 97.5%
ok
test_anova (tests.test_analysis_methods.TestMethods.test_anova) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:84: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/samples_metadata_cg.txt' mode='r' encoding='UTF-8'>
for line in open(metadata_file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:124: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(fname):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[hmm]
[hmm] Finished HMM - Sites Method
[hmm] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt.sites.txt
[hmm] Creating HMM Genes Level Output
[hmm] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt.genes.txt
[hmm] Finished HMM Method
####################
tests.test_analysis_methods.TestMethods.test_anova
####################
[anova] Starting Anova analysis
[anova] Getting Data
[anova] Normalizing using: TTR
[anova] Running Anova
[anova] Running Anova Method... 2.0%
[anova] Running Anova Method... 3.9%
[anova] Running Anova Method... 5.9%
[anova] Running Anova Method... 7.8%
[anova] Running Anova Method... 9.8%
[anova] Running Anova Method... 11.8%
[anova] Running Anova Method... 13.7%
[anova] Running Anova Method... 15.7%
[anova] Running Anova Method... 17.6%
[anova] Running Anova Method... 19.6%
[anova] Running Anova Method... 21.6%
[anova] Running Anova Method... 23.5%
[anova] Running Anova Method... 25.5%
[anova] Running Anova Method... 27.5%
[anova] Running Anova Method... 29.4%
[anova] Running Anova Method... 31.4%
[anova] Running Anova Method... 33.3%
[anova] Running Anova Method... 35.3%
[anova] Running Anova Method... 37.3%
[anova] Running Anova Method... 39.2%
[anova] Running Anova Method... 41.2%
[anova] Running Anova Method... 43.1%
[anova] Running Anova Method... 45.1%
[anova] Running Anova Method... 47.1%
[anova] Running Anova Method... 49.0%
[anova] Running Anova Method... 51.0%
[anova] Running Anova Method... 52.9%
[anova] Running Anova Method... 54.9%
[anova] Running Anova Method... 56.9%
[anova] Running Anova Method... 58.8%
[anova] Running Anova Method... 60.8%
[anova] Running Anova Method... 62.7%
[anova] Running Anova Method... 64.7%
[anova] Running Anova Method... 66.7%
[anova] Running Anova Method... 68.6%
[anova] Running Anova Method... 70.6%
[anova] Running Anova Method... 72.5%
[anova] Running Anova Method... 74.5%
[anova] Running Anova Method... 76.5%
[anova] Running Anova Method... 78.4%
[anova] Running Anova Method... 80.4%
[anova] Running Anova Method... 82.4%
[anova] Running Anova Method... 84.3%
[anova] Running Anova Method... 86.3%
[anova] Running Anova Method... 88.2%
[anova] Running Anova Method... 90.2%
[anova] Running Anova Method... 92.2%
[anova] Running Anova Method... 94.1%
[anova] Running Anova Method... 96.1%
[anova] Running Anova Method... 98.0%
[anova] Running Anova Method... 100.0%
/<<PKGBUILDDIR>>/tests/transit_test.py:89: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/testoutput.txt' mode='r' encoding='UTF-8'>
for line in open(fname):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_resampling (tests.test_analysis_methods.TestMethods.test_resampling) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:1290: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:1217: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:521: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
for line in open(self.annotation):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[anova] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt
[anova] Finished Anova analysis
[anova] Time: 0.6s
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_resampling
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Performing LOESS Correction
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Performing LOESS Correction
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
/<<PKGBUILDDIR>>/tests/transit_test.py:89: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/testoutput.txt' mode='r' encoding='UTF-8'>
for line in open(fname):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_resampling_adaptive (tests.test_analysis_methods.TestMethods.test_resampling_adaptive) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 13.41s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_resampling_adaptive
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_combined_wig (tests.test_analysis_methods.TestMethods.test_resampling_combined_wig) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:84: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/data/samples_metadata_cg.txt' mode='r' encoding='UTF-8'>
for line in open(metadata_file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 8.33s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_resampling_combined_wig
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_histogram (tests.test_analysis_methods.TestMethods.test_resampling_histogram) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 7.17s
[resampling] Finished resampling Method
36
35
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_resampling_histogram
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_multistrain (tests.test_analysis_methods.TestMethods.test_resampling_multistrain) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 13.96s
[resampling] Finished resampling Method
Removing histogram files
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_resampling_multistrain
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Multiple annotation files found
[resampling] Mapping ctrl data to /<<PKGBUILDDIR>>/tests/data/test.prot_table, exp data to /<<PKGBUILDDIR>>/tests/data/test.prot_table
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_utest (tests.test_analysis_methods.TestMethods.test_utest) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 26.65s
[resampling] Finished resampling Method
Removing histogram files
Removing output file...
####################
tests.test_analysis_methods.TestMethods.test_utest
####################
[utest] Starting Mann-Whitney U-test Method
[utest] Getting Data
[utest] Normalizing using: TTR
[utest] Running Mann-Whitney U-test Method... 2.0%
[utest] Running Mann-Whitney U-test Method... 3.9%
[utest] Running Mann-Whitney U-test Method... 5.9%
[utest] Running Mann-Whitney U-test Method... 7.8%
[utest] Running Mann-Whitney U-test Method... 9.8%
[utest] Running Mann-Whitney U-test Method... 11.8%
[utest] Running Mann-Whitney U-test Method... 13.7%
[utest] Running Mann-Whitney U-test Method... 15.7%
[utest] Running Mann-Whitney U-test Method... 17.6%
[utest] Running Mann-Whitney U-test Method... 19.6%
[utest] Running Mann-Whitney U-test Method... 21.6%
[utest] Running Mann-Whitney U-test Method... 23.5%
[utest] Running Mann-Whitney U-test Method... 25.5%
[utest] Running Mann-Whitney U-test Method... 27.5%
[utest] Running Mann-Whitney U-test Method... 29.4%
[utest] Running Mann-Whitney U-test Method... 31.4%
[utest] Running Mann-Whitney U-test Method... 33.3%
[utest] Running Mann-Whitney U-test Method... 35.3%
[utest] Running Mann-Whitney U-test Method... 37.3%
[utest] Running Mann-Whitney U-test Method... 39.2%
[utest] Running Mann-Whitney U-test Method... 41.2%
[utest] Running Mann-Whitney U-test Method... 43.1%
[utest] Running Mann-Whitney U-test Method... 45.1%
[utest] Running Mann-Whitney U-test Method... 47.1%
[utest] Running Mann-Whitney U-test Method... 49.0%
[utest] Running Mann-Whitney U-test Method... 51.0%
[utest] Running Mann-Whitney U-test Method... 52.9%
[utest] Running Mann-Whitney U-test Method... 54.9%
[utest] Running Mann-Whitney U-test Method... 56.9%
[utest] Running Mann-Whitney U-test Method... 58.8%
[utest] Running Mann-Whitney U-test Method... 60.8%
[utest] Running Mann-Whitney U-test Method... 62.7%
[utest] Running Mann-Whitney U-test Method... 64.7%
[utest] Running Mann-Whitney U-test Method... 66.7%
[utest] Running Mann-Whitney U-test Method... 68.6%
[utest] Running Mann-Whitney U-test Method... 70.6%
[utest] Running Mann-Whitney U-test Method... 72.5%
[utest] Running Mann-Whitney U-test Method... 74.5%
[utest] Running Mann-Whitney U-test Method... 76.5%
[utest] Running Mann-Whitney U-test Method... 78.4%
[utest] Running Mann-Whitney U-test Method... 80.4%
[utest] Running Mann-Whitney U-test Method... 82.4%
[utest] Running Mann-Whitney U-test Method... 84.3%
[utest] Running Mann-Whitney U-test Method... 86.3%
[utest] Running Mann-Whitney U-test Method... 88.2%
[utest] Running Mann-Whitney U-test Method... 90.2%
[utest] Running Mann-Whitney U-test Method... 92.2%
[utest] Running Mann-Whitney U-test Method... 94.1%
[utest] Running Mann-Whitney U-test Method... 96.1%
[utest] Running Mann-Whitney U-test Method... 98.0%
[utest] Running Mann-Whitney U-test Method... 100.0%
ok
test_zinb (tests.test_analysis_methods.TestMethods.test_zinb) ... skipped 'requires R, rpy2'
test_zinb_covariates (tests.test_analysis_methods.TestMethods.test_zinb_covariates) ... skipped 'requires R, rpy2'
test_zinb_interactions (tests.test_analysis_methods.TestMethods.test_zinb_interactions) ... skipped 'requires R, rpy2'
test_TTR (tests.test_norm_methods.TestNormMethods.test_TTR) ... ok
test_nonorm (tests.test_norm_methods.TestNormMethods.test_nonorm) ... ok
test_resampling_NZMean (tests.test_norm_methods.TestNormMethods.test_resampling_NZMean) ... [utest]
[utest] Performing Benjamini-Hochberg Correction
[utest] Adding File: /<<PKGBUILDDIR>>/tests/testoutput.txt
[utest] Finished Mann-Whitney U-test Method
Removing output file...
####################
tests.test_norm_methods.TestNormMethods.test_TTR
####################
####################
tests.test_norm_methods.TestNormMethods.test_nonorm
####################
####################
tests.test_norm_methods.TestNormMethods.test_resampling_NZMean
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: nzmean
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: nzmean
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_Quantile (tests.test_norm_methods.TestNormMethods.test_resampling_Quantile) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 1.49s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_norm_methods.TestNormMethods.test_resampling_Quantile
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: quantile
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: quantile
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
/<<PKGBUILDDIR>>/tests/transit_test.py:75: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/testoutput.txt' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_resampling_TTR (tests.test_norm_methods.TestNormMethods.test_resampling_TTR) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 1.94s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_norm_methods.TestNormMethods.test_resampling_TTR
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_TotReads (tests.test_norm_methods.TestNormMethods.test_resampling_TotReads) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 1.56s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_norm_methods.TestNormMethods.test_resampling_TotReads
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: totreads
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: totreads
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_ZINFNB (tests.test_norm_methods.TestNormMethods.test_resampling_ZINFNB) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 1.49s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_norm_methods.TestNormMethods.test_resampling_ZINFNB
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: zinfnb
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: zinfnb
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_resampling_nonorm (tests.test_norm_methods.TestNormMethods.test_resampling_nonorm) ... [resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 6.03s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_norm_methods.TestNormMethods.test_resampling_nonorm
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Preprocessing Exp data...
[resampling] Running Resampling Method... 2.0%
[resampling] Running Resampling Method... 3.9%
[resampling] Running Resampling Method... 5.9%
[resampling] Running Resampling Method... 7.8%
[resampling] Running Resampling Method... 9.8%
[resampling] Running Resampling Method... 11.8%
[resampling] Running Resampling Method... 13.7%
[resampling] Running Resampling Method... 15.7%
[resampling] Running Resampling Method... 17.6%
[resampling] Running Resampling Method... 19.6%
[resampling] Running Resampling Method... 21.6%
[resampling] Running Resampling Method... 23.5%
[resampling] Running Resampling Method... 25.5%
[resampling] Running Resampling Method... 27.5%
[resampling] Running Resampling Method... 29.4%
[resampling] Running Resampling Method... 31.4%
[resampling] Running Resampling Method... 33.3%
[resampling] Running Resampling Method... 35.3%
[resampling] Running Resampling Method... 37.3%
[resampling] Running Resampling Method... 39.2%
[resampling] Running Resampling Method... 41.2%
[resampling] Running Resampling Method... 43.1%
[resampling] Running Resampling Method... 45.1%
[resampling] Running Resampling Method... 47.1%
[resampling] Running Resampling Method... 49.0%
[resampling] Running Resampling Method... 51.0%
[resampling] Running Resampling Method... 52.9%
[resampling] Running Resampling Method... 54.9%
[resampling] Running Resampling Method... 56.9%
[resampling] Running Resampling Method... 58.8%
[resampling] Running Resampling Method... 60.8%
[resampling] Running Resampling Method... 62.7%
[resampling] Running Resampling Method... 64.7%
[resampling] Running Resampling Method... 66.7%
[resampling] Running Resampling Method... 68.6%
[resampling] Running Resampling Method... 70.6%
[resampling] Running Resampling Method... 72.5%
[resampling] Running Resampling Method... 74.5%
[resampling] Running Resampling Method... 76.5%
[resampling] Running Resampling Method... 78.4%
[resampling] Running Resampling Method... 80.4%
[resampling] Running Resampling Method... 82.4%
[resampling] Running Resampling Method... 84.3%
[resampling] Running Resampling Method... 86.3%
[resampling] Running Resampling Method... 88.2%
[resampling] Running Resampling Method... 90.2%
[resampling] Running Resampling Method... 92.2%
[resampling] Running Resampling Method... 94.1%
[resampling] Running Resampling Method... 96.1%
[resampling] Running Resampling Method... 98.0%
[resampling] Running Resampling Method... 100.0%
ok
test_cleanargs_flag_arguments_w_quotes (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_w_quotes) ... ok
test_cleanargs_flag_arguments_with_double_dash (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_with_double_dash) ... ok
test_cleanargs_flag_without_arguments (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_without_arguments) ... ok
test_cleanargs_negative_arguments (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_negative_arguments) ... ok
test_cleanargs_positional_arguments (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments) ... ok
test_cleanargs_positional_arguments_w_quotes (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments_w_quotes) ... ok
test_file_types (tests.test_pytransit_tools.TestTnSeqTools.test_file_types) ... ok
test_genes_creation_fromdata (tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromdata) ... /<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:1290: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/genomes/H37Rv.prot_table' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:1217: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/genomes/H37Rv.prot_table' mode='r' encoding='UTF-8'>
for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytransit/tnseq_tools.py:521: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/../src/pytransit/genomes/H37Rv.prot_table' mode='r' encoding='UTF-8'>
for line in open(self.annotation):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_genes_creation_fromwig (tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromwig) ... ok
test_normalization (tests.test_pytransit_tools.TestTnSeqTools.test_normalization) ... ok
test_read_data (tests.test_pytransit_tools.TestTnSeqTools.test_read_data) ... ok
test_tpp_flag_primer (tests.test_tpp.TestTPP.test_tpp_flag_primer) ... skipped 'requires local data file'
test_tpp_multicontig_auto_replicon_ids (tests.test_tpp.TestTPP.test_tpp_multicontig_auto_replicon_ids) ... [tn_preprocess] running pre-processing on /<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq and
[tn_preprocess] protocol: Sassetti
[tn_preprocess] transposon type: Himar1
[tn_preprocess] One reference genome specified: /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna, containing 3 records.
[tn_preprocess] Autogenerating replicon_ids...
[tn_preprocess] extracting reads...
[tn_preprocess] fastq2reads: /<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq -> /<<PKGBUILDDIR>>/tests/test_tpp_temp.reads1
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:85: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq' mode='r' encoding='UTF-8'>
for line in open(infile):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] assuming single-ended reads
[tn_preprocess] creating /<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1
[tn_preprocess] prefix sequence:
[tn_preprocess] Looking for start of Tn prefix within P,Q = [0,20]
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:285: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/test_tpp_temp.reads1' mode='r' encoding='UTF-8'>
for line in open(infile):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] mapping reads using BWA...(this takes a couple of minutes)
[tn_preprocess] /usr/bin/bwa index /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna
b'[bwa_index] Pack FASTA... 0.06 sec'
b'[bwa_index] Construct BWT for the packed sequence...'
b'[bwa_index] 2.50 seconds elapse.'
b'[bwa_index] Update BWT... 0.06 sec'
b'[bwa_index] Pack forward-only FASTA... 0.04 sec'
b'[bwa_index] Construct SA from BWT and Occ... 2.98 sec'
b'[main] Version: 0.7.17-r1188'
b'[main] CMD: /usr/bin/bwa index /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna'
b'[main] Real time: 5.703 sec; CPU: 5.645 sec'
b''
[tn_preprocess] /usr/bin/bwa mem /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna /<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1 > /<<PKGBUILDDIR>>/tests/test_tpp_temp.sam
b'[M::bwa_idx_load_from_disk] read 0 ALT contigs'
b'[M::process] read 2500 sequences (304052 bp)...'
b'[M::mem_process_seqs] Processed 2500 reads in 0.260 CPU sec, 0.260 real sec'
b'[main] Version: 0.7.17-r1188'
b'[main] CMD: /usr/bin/bwa mem /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna /<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1'
b'[main] Real time: 0.280 sec; CPU: 0.277 sec'
b''
[tn_preprocess] tabulating template counts and statistics for reference genome /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:387: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/data/test-multicontig.fna' mode='r' encoding='UTF-8'>
for line in open(filename):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:569: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/test_tpp_temp.sam' mode='r' encoding='UTF-8'>
for line in open(sam):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp_1.wig
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp_2.wig
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp_3.wig
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:1118: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/test_tpp_temp.reads1' mode='r' encoding='UTF-8'>
read_length = get_read_length(vars.base + ".reads1")
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:1119: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1' mode='r' encoding='UTF-8'>
mean_r1_genomic = get_genomic_portion(vars.base + ".trimmed1")
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/<<PKGBUILDDIR>>/tests/../src/pytpp/tpp_tools.py:1197: ResourceWarning: unclosed file <_io.TextIOWrapper name='/<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1' mode='r' encoding='UTF-8'>
for line in open(vars.trimmed1):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp.tn_stats
[tn_preprocess] Done.
ok
test_tpp_multicontig_empty_prefix (tests.test_tpp.TestTPP.test_tpp_multicontig_empty_prefix) ... [tn_preprocess] running pre-processing on /<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq and
[tn_preprocess] protocol: Sassetti
[tn_preprocess] transposon type: Himar1
[tn_preprocess] One reference genome specified: /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna, containing 3 records.
[tn_preprocess] extracting reads...
[tn_preprocess] fastq2reads: /<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq -> /<<PKGBUILDDIR>>/tests/test_tpp_temp.reads1
[tn_preprocess] assuming single-ended reads
[tn_preprocess] creating /<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1
[tn_preprocess] prefix sequence:
[tn_preprocess] Looking for start of Tn prefix within P,Q = [0,20]
[tn_preprocess] mapping reads using BWA...(this takes a couple of minutes)
[tn_preprocess] /usr/bin/bwa mem /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna /<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1 > /<<PKGBUILDDIR>>/tests/test_tpp_temp.sam
b'[M::bwa_idx_load_from_disk] read 0 ALT contigs'
b'[M::process] read 2500 sequences (304052 bp)...'
b'[M::mem_process_seqs] Processed 2500 reads in 0.263 CPU sec, 0.263 real sec'
b'[main] Version: 0.7.17-r1188'
b'[main] CMD: /usr/bin/bwa mem /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna /<<PKGBUILDDIR>>/tests/test_tpp_temp.trimmed1'
b'[main] Real time: 0.284 sec; CPU: 0.279 sec'
b''
[tn_preprocess] tabulating template counts and statistics for reference genome /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp_a.wig
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp_b.wig
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp_c.wig
[tn_preprocess] writing /<<PKGBUILDDIR>>/tests/test_tpp_temp.tn_stats
[tn_preprocess] Done.
ok
test_tpp_noflag_primer (tests.test_tpp.TestTPP.test_tpp_noflag_primer) ... skipped 'requires local data file'
test_tpp_protocol_mme1 (tests.test_tpp.TestTPP.test_tpp_protocol_mme1) ... skipped 'requires local data file'
----------------------------------------------------------------------
Ran 39 tests in 135.598s
OK (skipped=6)
[resampling]
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 1.50s
[resampling] Finished resampling Method
Removing output file...
####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_w_quotes
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_with_double_dash
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_without_arguments
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_negative_arguments
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments_w_quotes
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_file_types
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromdata
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromwig
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_normalization
####################
####################
tests.test_pytransit_tools.TestTnSeqTools.test_read_data
####################
####################
tests.test_tpp.TestTPP.test_tpp_multicontig_auto_replicon_ids
####################
/<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq
# title: Tn-Seq Pre-Processor
# date: 12/02/2023 05:40:10
# command: python python3.11 -m unittest -v tests/test_analysis_methods.py tests/test_norm_methods.py tests/test_pytransit_tools.py tests/test_tpp.py tests/transit_test.py
# transposon type: Himar1
# protocol type: Sassetti
# bwa flags:
# read1: /<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq
# read2:
# ref_genome: /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna
# replicon_ids: 1,2,3
# total_reads (or read pairs): 2500
# truncated_reads 156 (genomic inserts shorter than the read length; ADAP2 appears in read1)
# trimmed_reads (reads with valid Tn prefix, and insert size>20bp): 2512
# reads1_mapped: 2116
# reads2_mapped: 0
# mapped_reads (both R1 and R2 map into genome, and R2 has a proper barcode): 2116
# read_count (TA sites only, for Himar1):
# 1: 63
# 2: 0
# 3: 0
# template_count:
# 1: 63
# 2: 0
# 3: 0
# template_ratio (reads per template):
# 1: 1.00
# 2: 0.00
# 3: 0.00
# TA_sites:
# 1: 89994
# 2: 646
# 3: 664
# TAs_hit:
# 1: 63
# 2: 0
# 3: 0
# density:
# 1: 0.001
# 2: 0.000
# 3: 0.000
# max_count (among templates):
# 1: 1
# 2: 0
# 3: 0
# max_site (coordinate):
# 1: 4977050
# 2: 57441
# 3: 38111
# NZ_mean (among templates):
# 1: 1.0
# 2: 0.0
# 3: 0.0
# FR_corr (Fwd templates vs. Rev templates):
# 1: -0.000
# 2: nan
# 3: nan
# BC_corr (reads vs. templates, summed over both strands):
# 1: nan
# 2: nan
# 3: nan
# Break-down of total reads (2500):
# -12 reads (-0.5%) lack the expected Tn prefix
# Break-down of trimmed reads with valid Tn prefix (2500):
# primer_matches: 36 reads (1.4%) contain CTAGAGGGCCCAATTCGCCCTATAGTGAGT (Himar1)
# vector_matches: 36 reads (1.4%) contain CTAGACCGTCCAGTCTGGCAGGCCGGAAAC (phiMycoMarT7)
# adapter_matches: 14 reads (0.6%) contain GATCGGAAGAGCACACGTCTGAACTCCAGTCAC (Illumina/TruSeq index)
# misprimed_reads: 17 reads (0.7%) contain Himar1 prefix but don't end in TGTTA
# read_length: 125 bp
# mean_R1_genomic_length: 121.6 bp
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
####################
tests.test_tpp.TestTPP.test_tpp_multicontig_empty_prefix
####################
/<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq
# title: Tn-Seq Pre-Processor
# date: 12/02/2023 05:40:12
# command: python python3.11 -m unittest -v tests/test_analysis_methods.py tests/test_norm_methods.py tests/test_pytransit_tools.py tests/test_tpp.py tests/transit_test.py
# transposon type: Himar1
# protocol type: Sassetti
# bwa flags:
# read1: /<<PKGBUILDDIR>>/tests/data/test-multicontig-1.fastq
# read2:
# ref_genome: /<<PKGBUILDDIR>>/tests/data/test-multicontig.fna
# replicon_ids: a,b,c
# total_reads (or read pairs): 2500
# truncated_reads 156 (genomic inserts shorter than the read length; ADAP2 appears in read1)
# trimmed_reads (reads with valid Tn prefix, and insert size>20bp): 2512
# reads1_mapped: 2116
# reads2_mapped: 0
# mapped_reads (both R1 and R2 map into genome, and R2 has a proper barcode): 2116
# read_count (TA sites only, for Himar1):
# a: 63
# b: 0
# c: 0
# template_count:
# a: 63
# b: 0
# c: 0
# template_ratio (reads per template):
# a: 1.00
# b: 0.00
# c: 0.00
# TA_sites:
# a: 89994
# b: 646
# c: 664
# TAs_hit:
# a: 63
# b: 0
# c: 0
# density:
# a: 0.001
# b: 0.000
# c: 0.000
# max_count (among templates):
# a: 1
# b: 0
# c: 0
# max_site (coordinate):
# a: 4977050
# b: 57441
# c: 38111
# NZ_mean (among templates):
# a: 1.0
# b: 0.0
# c: 0.0
# FR_corr (Fwd templates vs. Rev templates):
# a: -0.000
# b: nan
# c: nan
# BC_corr (reads vs. templates, summed over both strands):
# a: nan
# b: nan
# c: nan
# Break-down of total reads (2500):
# -12 reads (-0.5%) lack the expected Tn prefix
# Break-down of trimmed reads with valid Tn prefix (2500):
# primer_matches: 36 reads (1.4%) contain CTAGAGGGCCCAATTCGCCCTATAGTGAGT (Himar1)
# vector_matches: 36 reads (1.4%) contain CTAGACCGTCCAGTCTGGCAGGCCGGAAAC (phiMycoMarT7)
# adapter_matches: 14 reads (0.6%) contain GATCGGAAGAGCACACGTCTGAACTCCAGTCAC (Illumina/TruSeq index)
# misprimed_reads: 17 reads (0.7%) contain Himar1 prefix but don't end in TGTTA
# read_length: 125 bp
# mean_R1_genomic_length: 121.6 bp
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install --destdir=debian/tnseq-transit/ -a -O--buildsystem=pybuild
I: pybuild base:310: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/tnseq-transit
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running egg_info
writing tnseq_transit.egg-info/PKG-INFO
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
writing requirements to tnseq_transit.egg-info/requires.txt
writing top-level names to tnseq_transit.egg-info/top_level.txt
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'VERSION'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
adding license file 'LICENSE.md'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pytransit.data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'pytransit.data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'pytransit.data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'pytransit.data' to be distributed and are
already explicitly excluding 'pytransit.data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pytransit.data.CGI' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'pytransit.data.CGI' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'pytransit.data.CGI' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'pytransit.data.CGI' to be distributed and are
already explicitly excluding 'pytransit.data.CGI' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pytransit.genomes' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'pytransit.genomes' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'pytransit.genomes' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'pytransit.genomes' to be distributed and are
already explicitly excluding 'pytransit.genomes' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
running install_lib
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp/__main__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp/tpp_gui.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytpp/tpp_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/__main__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/draw_trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/fileDisplay.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/images.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/norm_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/qcDisplay.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/stat_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/tnseq_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/transit_gui.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/transit_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/view_trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/CGI.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/anova.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/binomial.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/corrplot.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/example.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/gi.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/griffin.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/gumbel.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/heatmap.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/hmm.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/norm.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/normalize.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/pathway_enrichment.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/rankproduct.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/resampling.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/tn5gaps.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/tnseq_stats.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/ttnfitness.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/utest.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/analysis/zinb.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/convert/gff_to_prot_table.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export/combined_wig.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export/igv.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export/mean_counts.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/export/prot_table.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/COG_roles.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/GO_associated_Rvs-3-11-18.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/GO_associated_Rvs.csv -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/GO_term_names.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/GO_terms_for_each_Rv.obo-3-11-18.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv_COG_roles.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv_GO_terms.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv_sanger_roles.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/README.md -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_rep3.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_glycerol_combined.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/gene_ontology.1_2.3-11-18.obo -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/glycerol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/glycerol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/glycerol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/iron_combined_wig4.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/iron_samples_metadata.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/samples_metadata_cg.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/samples_metadata_cg_covar.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/samples_metadata_cg_interactions.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/sanger_roles.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/smeg_COG_roles.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/smeg_GO_terms.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data/CGI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI/IDs.H37Rv.CRISPRi.lib.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data/CGI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI/counts_metadata.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data/CGI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI/sgRNA_metadata.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data/CGI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/data/CGI/uninduced_ATC_counts.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data/CGI
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/BCG.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/BCG.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37Rv.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37Rv.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvBD.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvBD.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvBD_mod3.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvMA2.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvMA2.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/genomes.html -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/mc2_155_tamu.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/pytransit/genomes/mc2_155_tamu.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/__main__.py to __main__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/tpp_gui.py to tpp_gui.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/tpp_tools.py to tpp_tools.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/__main__.py to __main__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/draw_trash.py to draw_trash.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/fileDisplay.py to fileDisplay.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/images.py to images.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/norm_tools.py to norm_tools.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/qcDisplay.py to qcDisplay.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/stat_tools.py to stat_tools.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/tnseq_tools.py to tnseq_tools.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/transit_gui.py to transit_gui.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/transit_tools.py to transit_tools.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/trash.py to trash.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/view_trash.py to view_trash.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/CGI.py to CGI.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/anova.py to anova.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/base.py to base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/binomial.py to binomial.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/corrplot.py to corrplot.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/example.py to example.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/gi.py to gi.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/griffin.py to griffin.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/gumbel.py to gumbel.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/heatmap.py to heatmap.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/hmm.py to hmm.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/norm.py to norm.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/normalize.py to normalize.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/pathway_enrichment.py to pathway_enrichment.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/rankproduct.py to rankproduct.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/resampling.py to resampling.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/tn5gaps.py to tn5gaps.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/tnseq_stats.py to tnseq_stats.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/ttnfitness.py to ttnfitness.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/utest.py to utest.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/zinb.py to zinb.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert/base.py to base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert/gff_to_prot_table.py to gff_to_prot_table.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/base.py to base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/combined_wig.py to combined_wig.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/igv.py to igv.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/mean_counts.py to mean_counts.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/prot_table.py to prot_table.cpython-311.pyc
running install_egg_info
Copying tnseq_transit.egg-info to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python3.11/dist-packages/tnseq_transit-3.3.3.egg-info
Skipping SOURCES.txt
running install_scripts
Installing tpp script to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/bin
Installing transit script to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/bin
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
mv debian/tnseq-transit/usr/bin/tpp debian/tnseq-transit/usr/bin/transit-tpp
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'tnseq-transit' in '../tnseq-transit_3.3.3-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../tnseq-transit_3.3.3-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian pi5 test autobuilder <root@raspbian.org> -O../tnseq-transit_3.3.3-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-12-02T05:41:18Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
tnseq-transit_3.3.3-1_armhf.changes:
------------------------------------
Format: 1.8
Date: Wed, 29 Nov 2023 19:42:33 +0100
Source: tnseq-transit
Binary: tnseq-transit
Architecture: armhf
Version: 3.3.3-1
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian pi5 test autobuilder <root@raspbian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Description:
tnseq-transit - statistical calculations of essentiality of genes or genomic regi
Changes:
tnseq-transit (3.3.3-1) unstable; urgency=medium
.
* New upstream version
Checksums-Sha1:
73d6cb1accebb58e5a9c48eb9c81c6c5bc793739 8412 tnseq-transit_3.3.3-1_armhf.buildinfo
86869ac5a13422bbb23fb133278ab116c6916807 18848524 tnseq-transit_3.3.3-1_armhf.deb
Checksums-Sha256:
39bfa473073202d9a85902d8e2ace45f6386e47a262dcd66c907e1b23f0d07f3 8412 tnseq-transit_3.3.3-1_armhf.buildinfo
81408b68f76e2464198b1917d4adef8864384048c777fc176b9908f24d00f719 18848524 tnseq-transit_3.3.3-1_armhf.deb
Files:
935b0e6057cbc1623c7afe3de02306dc 8412 science optional tnseq-transit_3.3.3-1_armhf.buildinfo
f740bb7de7914704de3abb6b6fdeafbc 18848524 science optional tnseq-transit_3.3.3-1_armhf.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: tnseq-transit
Binary: tnseq-transit
Architecture: armhf
Version: 3.3.3-1
Checksums-Md5:
f740bb7de7914704de3abb6b6fdeafbc 18848524 tnseq-transit_3.3.3-1_armhf.deb
Checksums-Sha1:
86869ac5a13422bbb23fb133278ab116c6916807 18848524 tnseq-transit_3.3.3-1_armhf.deb
Checksums-Sha256:
81408b68f76e2464198b1917d4adef8864384048c777fc176b9908f24d00f719 18848524 tnseq-transit_3.3.3-1_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Sat, 02 Dec 2023 05:41:17 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
autoconf (= 2.71-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.21-13),
autotools-dev (= 20220109.1),
base-files (= 13+rpi1),
base-passwd (= 3.6.2),
bash (= 5.2.15-2),
binutils (= 2.41-6+rpi1),
binutils-arm-linux-gnueabihf (= 2.41-6+rpi1),
binutils-common (= 2.41-6+rpi1),
blt (= 2.5.3+dfsg-4.1),
bsdextrautils (= 2.39.2-6),
bsdutils (= 1:2.39.2-6),
build-essential (= 12.9),
bwa (= 0.7.17-7),
bzip2 (= 1.0.8-5+b2),
coreutils (= 9.1-1),
cpp (= 4:13.2.0-1+rpi1),
cpp-12 (= 12.3.0-10+rpi1),
cpp-13 (= 13.2.0-5+rpi1),
dash (= 0.5.12-6),
debconf (= 1.5.82),
debhelper (= 13.11.8),
debianutils (= 5.14),
dh-autoreconf (= 20),
dh-python (= 6.20231107),
dh-strip-nondeterminism (= 1.13.1-1),
diffutils (= 1:3.10-1),
dpkg (= 1.22.1+rpi1),
dpkg-dev (= 1.22.1+rpi1),
dwz (= 0.15-1),
file (= 1:5.45-2),
findutils (= 4.9.0-5),
fontconfig-config (= 2.14.2-6),
fonts-dejavu-core (= 2.37-8),
fonts-dejavu-mono (= 2.37-8),
fonts-lyx (= 2.3.7-1),
g++ (= 4:13.2.0-1+rpi1),
g++-13 (= 13.2.0-5+rpi1),
gcc (= 4:13.2.0-1+rpi1),
gcc-12 (= 12.3.0-10+rpi1),
gcc-12-base (= 12.3.0-10+rpi1),
gcc-13 (= 13.2.0-5+rpi1),
gcc-13-base (= 13.2.0-5+rpi1),
gettext (= 0.21-13),
gettext-base (= 0.21-13),
grep (= 3.11-3),
groff-base (= 1.23.0-3),
gzip (= 1.12-1),
hostname (= 3.23+nmu1),
init-system-helpers (= 1.65.2),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.1-3),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 13.2.0-5+rpi1),
libatomic1 (= 13.2.0-5+rpi1),
libattr1 (= 1:2.5.1-4),
libaudit-common (= 1:3.1.1-1),
libaudit1 (= 1:3.1.1-1),
libbinutils (= 2.41-6+rpi1),
libblas3 (= 3.11.0-2),
libblkid1 (= 2.39.2-6),
libbrotli1 (= 1.1.0-2),
libbsd0 (= 0.11.7-4),
libbz2-1.0 (= 1.0.8-5+b2),
libc-bin (= 2.37-12+rpi2),
libc-dev-bin (= 2.37-12+rpi2),
libc6 (= 2.37-12+rpi2),
libc6-dev (= 2.37-12+rpi2),
libcap-ng0 (= 0.8.3-1+b1),
libcap2 (= 1:2.66-4),
libcc1-0 (= 13.2.0-5+rpi1),
libcom-err2 (= 1.47.0-2),
libcrypt-dev (= 1:4.4.36-2),
libcrypt1 (= 1:4.4.36-2),
libctf-nobfd0 (= 2.41-6+rpi1),
libctf0 (= 2.41-6+rpi1),
libdb5.3 (= 5.3.28+dfsg2-2),
libdebconfclient0 (= 0.271),
libdebhelper-perl (= 13.11.8),
libdeflate0 (= 1.18-1),
libdpkg-perl (= 1.22.1+rpi1),
libelf1 (= 0.188-2.1+rpi1),
libexpat1 (= 2.5.0-2),
libexpat1-dev (= 2.5.0-2),
libffi8 (= 3.4.4-1),
libfile-stripnondeterminism-perl (= 1.13.1-1),
libfontconfig1 (= 2.14.2-6),
libfreetype6 (= 2.13.2+dfsg-1),
libfribidi0 (= 1.0.13-3),
libgcc-12-dev (= 12.3.0-10+rpi1),
libgcc-13-dev (= 13.2.0-5+rpi1),
libgcc-s1 (= 13.2.0-5+rpi1),
libgcrypt20 (= 1.10.2-3),
libgdbm-compat4 (= 1.23-3),
libgdbm6 (= 1.23-3),
libgfortran5 (= 13.2.0-5+rpi1),
libglib2.0-0 (= 2.78.1-4),
libgmp10 (= 2:6.3.0+dfsg-2),
libgomp1 (= 13.2.0-5+rpi1),
libgpg-error0 (= 1.47-2),
libgraphite2-3 (= 1.3.14-1),
libgssapi-krb5-2 (= 1.20.1-4),
libharfbuzz0b (= 8.0.1-1),
libicu72 (= 72.1-4),
libimagequant0 (= 2.18.0-1),
libisl23 (= 0.26-3),
libjansson4 (= 2.14-2),
libjbig0 (= 2.1-6.1),
libjpeg62-turbo (= 1:2.1.5-2),
libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
libjs-jquery-ui (= 1.13.2+dfsg-1),
libjs-sphinxdoc (= 7.2.6-2),
libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
libk5crypto3 (= 1.20.1-4),
libkeyutils1 (= 1.6.3-2),
libkrb5-3 (= 1.20.1-4),
libkrb5support0 (= 1.20.1-4),
liblapack3 (= 3.11.0-2),
liblbfgsb0 (= 3.0+dfsg.4-1),
liblcms2-2 (= 2.14-2),
liblerc4 (= 4.0.0+ds-3),
liblz4-1 (= 1.9.4-1+rpi1+b1),
liblzma5 (= 5.4.4-0.1),
libmagic-mgc (= 1:5.45-2),
libmagic1 (= 1:5.45-2),
libmd0 (= 1.1.0-1),
libmount1 (= 2.39.2-6),
libmpc3 (= 1.3.1-1),
libmpfr6 (= 4.2.1-1),
libncursesw6 (= 6.4+20231016-1),
libnsl-dev (= 1.3.0-2),
libnsl2 (= 1.3.0-2),
libopenjp2-7 (= 2.5.0-2),
libpam-modules (= 1.5.2-9.1),
libpam-modules-bin (= 1.5.2-9.1),
libpam-runtime (= 1.5.2-9.1),
libpam0g (= 1.5.2-9.1),
libpcre2-8-0 (= 10.42-4),
libperl5.36 (= 5.36.0-9),
libpipeline1 (= 1.5.7-1),
libpng16-16 (= 1.6.40-2),
libproc2-0 (= 2:4.0.4-2),
libpython3-dev (= 3.11.4-5),
libpython3-stdlib (= 3.11.4-5),
libpython3.11 (= 3.11.6-3),
libpython3.11-dev (= 3.11.6-3),
libpython3.11-minimal (= 3.11.6-3),
libpython3.11-stdlib (= 3.11.6-3),
libqhull-r8.0 (= 2020.2-6),
libraqm0 (= 0.10.1-1),
libreadline8 (= 8.2-1.3),
libseccomp2 (= 2.5.4-1+rpi1+b1),
libselinux1 (= 3.5-1),
libsframe1 (= 2.41-6+rpi1),
libsharpyuv0 (= 1.3.2-0.3),
libsmartcols1 (= 2.39.2-6),
libsqlite3-0 (= 3.43.2-1),
libssl3 (= 3.0.11-1),
libstdc++-13-dev (= 13.2.0-5+rpi1),
libstdc++6 (= 13.2.0-5+rpi1),
libsub-override-perl (= 0.09-4),
libsystemd0 (= 254.5-1+rpi1),
libtcl8.6 (= 8.6.13+dfsg-2),
libtiff6 (= 4.5.1+git230720-1),
libtinfo6 (= 6.4+20231016-1),
libtirpc-common (= 1.3.3+ds-1),
libtirpc-dev (= 1.3.3+ds-1),
libtirpc3 (= 1.3.3+ds-1),
libtk8.6 (= 8.6.13-2),
libtool (= 2.4.7-7),
libubsan1 (= 13.2.0-5+rpi1),
libuchardet0 (= 0.0.7-1),
libudev1 (= 254.5-1+rpi1),
libunistring5 (= 1.1-2),
libuuid1 (= 2.39.2-6),
libwebp7 (= 1.3.2-0.3),
libwebpdemux2 (= 1.3.2-0.3),
libwebpmux3 (= 1.3.2-0.3),
libx11-6 (= 2:1.8.7-1),
libx11-data (= 2:1.8.7-1),
libxau6 (= 1:1.0.9-1),
libxcb1 (= 1.15-1),
libxdmcp6 (= 1:1.1.2-3),
libxext6 (= 2:1.3.4-1),
libxft2 (= 2.3.6-1),
libxml2 (= 2.9.14+dfsg-1.3),
libxrender1 (= 1:0.9.10-1.1),
libxslt1.1 (= 1.1.35-1),
libxss1 (= 1:1.2.3-1),
libzstd1 (= 1.5.5+dfsg2-2),
linux-libc-dev (= 6.5.6-1+rpi1),
login (= 1:4.13+dfsg1-3),
lsb-base (= 11.6+rpi1),
m4 (= 1.4.19-4),
mailcap (= 3.70+nmu1),
make (= 4.3-4.1),
man-db (= 2.12.0-1),
mawk (= 1.3.4.20230808-1),
media-types (= 10.1.0),
mime-support (= 3.66),
ncurses-base (= 6.4+20231016-1),
ncurses-bin (= 6.4+20231016-1),
patch (= 2.7.6-7),
perl (= 5.36.0-9),
perl-base (= 5.36.0-9),
perl-modules-5.36 (= 5.36.0-9),
po-debconf (= 1.0.21+nmu1),
procps (= 2:4.0.4-2),
python-matplotlib-data (= 3.6.3-1),
python3 (= 3.11.4-5),
python3-appdirs (= 1.4.4-4),
python3-attr (= 23.1.0-2),
python3-brotli (= 1.1.0-2),
python3-contourpy (= 1.0.7-1),
python3-cycler (= 0.11.0-1),
python3-dateutil (= 2.8.2-3),
python3-decorator (= 5.1.1-5),
python3-dev (= 3.11.4-5),
python3-distutils (= 3.11.5-1),
python3-fonttools (= 4.38.0-1),
python3-fs (= 2.4.16-2),
python3-joblib (= 1.3.2-1),
python3-kiwisolver (= 1.4.4-1),
python3-lib2to3 (= 3.11.5-1),
python3-lxml (= 4.9.3-1),
python3-lz4 (= 4.0.2+dfsg-1+b1),
python3-matplotlib (= 3.6.3-1),
python3-minimal (= 3.11.4-5),
python3-mpmath (= 1.2.1-2),
python3-numpy (= 1:1.24.2-1),
python3-packaging (= 23.2-1),
python3-pandas (= 1.5.3+dfsg-6),
python3-pandas-lib (= 1.5.3+dfsg-6),
python3-patsy (= 0.5.3-1),
python3-pil (= 10.0.0-1),
python3-pil.imagetk (= 10.0.0-1),
python3-pkg-resources (= 68.1.2-2),
python3-pubsub (= 4.0.3-7),
python3-pyparsing (= 3.1.1-1),
python3-scipy (= 1.10.1-5+rpi1),
python3-setuptools (= 68.1.2-2),
python3-six (= 1.16.0-4),
python3-sklearn (= 1.2.1+dfsg-1),
python3-sklearn-lib (= 1.2.1+dfsg-1),
python3-statsmodels (= 0.14.0+dfsg-5+rpi1),
python3-statsmodels-lib (= 0.14.0+dfsg-5+rpi1),
python3-sympy (= 1.12-6),
python3-threadpoolctl (= 3.1.0-1),
python3-tk (= 3.11.5-1),
python3-tz (= 2023.3.post1-1),
python3-ufolib2 (= 0.16.0+dfsg1-1),
python3-unicodedata2 (= 15.1.0+ds-1),
python3.11 (= 3.11.6-3),
python3.11-dev (= 3.11.6-3),
python3.11-minimal (= 3.11.6-3),
readline-common (= 8.2-1.3),
rpcsvc-proto (= 1.4.3-1),
sed (= 4.9-1),
sensible-utils (= 0.0.20),
sysvinit-utils (= 3.08-3),
tar (= 1.34+dfsg-1.2),
tk8.6-blt2.5 (= 2.5.3+dfsg-4.1),
tzdata (= 2023c-10),
unicode-data (= 15.1.0-1),
usr-is-merged (= 37),
util-linux (= 2.39.2-6),
x11-common (= 1:7.7+23),
xz-utils (= 5.4.4-0.1),
zlib1g (= 1:1.2.13.dfsg-3),
zlib1g-dev (= 1:1.2.13.dfsg-3)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="C.UTF-8"
LC_COLLATE="C.UTF-8"
SOURCE_DATE_EPOCH="1701283353"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
tnseq-transit_3.3.3-1_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 18848524 bytes: control archive=4164 bytes.
1401 bytes, 28 lines control
9862 bytes, 104 lines md5sums
273 bytes, 12 lines * postinst #!/bin/sh
386 bytes, 12 lines * prerm #!/bin/sh
Package: tnseq-transit
Version: 3.3.3-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 121369
Depends: python3-matplotlib, python3-numpy, python3-pil, python3-pkg-resources, python3-pubsub, python3-scipy, python3-sklearn, python3-statsmodels, python3-wxgtk4.0, python3:any, bwa
Breaks: transit
Replaces: transit
Provides: transit
Section: science
Priority: optional
Homepage: http://saclab.tamu.edu/essentiality/transit/
Description: statistical calculations of essentiality of genes or genomic regions
This is a software that can be used to analyze Tn-Seq datasets. It
includes various statistical calculations of essentiality of genes or
genomic regions (including conditional essentiality between 2
conditions). These methods were developed and tested as a collaboration
between the Sassetti lab (UMass) and the Ioerger lab (Texas A&M)
.
TRANSIT is capable of analyzing TnSeq libraries constructed with Himar1
or Tn5 datasets.
.
TRANSIT assumes you have already done pre-processing of raw sequencing
files (.fastq) and extracted read counts into a .wig formatted file.
The .wig file should contain the counts at all sites where an insertion
could take place (including sites with no reads). For Himar1 datasets
this is all TA sites in the genome. For Tn5 datasets this would be all
nucleotides in the genome.
drwxr-xr-x root/root 0 2023-11-29 18:42 ./
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/bin/
-rwxr-xr-x root/root 976 2023-11-29 18:42 ./usr/bin/transit
-rwxr-xr-x root/root 968 2023-11-29 18:42 ./usr/bin/transit-tpp
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytpp/
-rw-r--r-- root/root 1 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytpp/__init__.py
-rw-r--r-- root/root 3655 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytpp/__main__.py
-rw-r--r-- root/root 25736 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytpp/tpp_gui.py
-rw-r--r-- root/root 57457 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytpp/tpp_tools.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/
-rw-r--r-- root/root 119 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/__init__.py
-rw-r--r-- root/root 4950 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/__main__.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/analysis/
-rw-r--r-- root/root 20246 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/CGI.py
-rw-r--r-- root/root 2087 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/__init__.py
-rw-r--r-- root/root 14221 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/anova.py
-rw-r--r-- root/root 22458 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/base.py
-rw-r--r-- root/root 20720 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/binomial.py
-rw-r--r-- root/root 6818 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/corrplot.py
-rw-r--r-- root/root 7621 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/example.py
-rw-r--r-- root/root 40223 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/gi.py
-rw-r--r-- root/root 10076 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/griffin.py
-rw-r--r-- root/root 22735 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/gumbel.py
-rw-r--r-- root/root 7166 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/heatmap.py
-rw-r--r-- root/root 23195 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/hmm.py
-rw-r--r-- root/root 3925 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/norm.py
-rw-r--r-- root/root 5129 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/normalize.py
-rw-r--r-- root/root 22667 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/pathway_enrichment.py
-rw-r--r-- root/root 13656 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/rankproduct.py
-rw-r--r-- root/root 35745 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/resampling.py
-rw-r--r-- root/root 15334 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/tn5gaps.py
-rw-r--r-- root/root 5122 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/tnseq_stats.py
-rw-r--r-- root/root 24349 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/ttnfitness.py
-rw-r--r-- root/root 14596 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/utest.py
-rw-r--r-- root/root 33596 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/analysis/zinb.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/convert/
-rw-r--r-- root/root 330 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/convert/__init__.py
-rw-r--r-- root/root 5996 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/convert/base.py
-rw-r--r-- root/root 5761 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/convert/gff_to_prot_table.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/data/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/data/CGI/
-rw-r--r-- root/root 6584803 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/CGI/IDs.H37Rv.CRISPRi.lib.txt
-rw-r--r-- root/root 377 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/CGI/counts_metadata.txt
-rw-r--r-- root/root 24317050 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/CGI/sgRNA_metadata.txt
-rw-r--r-- root/root 7346011 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/CGI/uninduced_ATC_counts.txt
-rw-r--r-- root/root 939 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/COG_roles.dat
-rw-r--r-- root/root 469931 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/GO_associated_Rvs-3-11-18.txt
-rw-r--r-- root/root 285249 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/GO_associated_Rvs.csv
-rw-r--r-- root/root 2582004 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/GO_term_names.dat
-rw-r--r-- root/root 2043959 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/GO_terms_for_each_Rv.obo-3-11-18.txt
-rw-r--r-- root/root 32738 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/H37Rv.sanger_associated_RVS.csv
-rw-r--r-- root/root 146196 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/H37Rv_COG_roles.dat
-rw-r--r-- root/root 2043959 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/H37Rv_GO_terms.txt
-rw-r--r-- root/root 102346 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/H37Rv_sanger_roles.dat
-rw-r--r-- root/root 2644 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/README.md
-rw-r--r-- root/root 785384 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/cholesterol_H37Rv_merged.wig
-rw-r--r-- root/root 766014 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/cholesterol_H37Rv_rep1.wig
-rw-r--r-- root/root 762998 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/cholesterol_H37Rv_rep2.wig
-rw-r--r-- root/root 757561 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/cholesterol_H37Rv_rep3.wig
-rw-r--r-- root/root 3189503 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/cholesterol_glycerol_combined.dat
-rw-r--r-- root/root 33810329 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/gene_ontology.1_2.3-11-18.obo
-rw-r--r-- root/root 789627 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/glycerol_H37Rv_merged.wig
-rw-r--r-- root/root 766649 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/glycerol_H37Rv_rep1.wig
-rw-r--r-- root/root 779802 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/glycerol_H37Rv_rep2.wig
-rw-r--r-- root/root 6774097 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/iron_combined_wig4.txt
-rw-r--r-- root/root 473 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/iron_samples_metadata.txt
-rw-r--r-- root/root 315 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/samples_metadata_cg.txt
-rw-r--r-- root/root 362 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/samples_metadata_cg_covar.txt
-rw-r--r-- root/root 364 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/samples_metadata_cg_interactions.txt
-rw-r--r-- root/root 3737 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/sanger_roles.dat
-rw-r--r-- root/root 413875 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/smeg_COG_roles.dat
-rw-r--r-- root/root 598597 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/data/smeg_GO_terms.txt
-rw-r--r-- root/root 12680 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/draw_trash.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/export/
-rw-r--r-- root/root 480 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/export/__init__.py
-rw-r--r-- root/root 8406 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/export/base.py
-rw-r--r-- root/root 7382 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/export/combined_wig.py
-rw-r--r-- root/root 6268 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/export/igv.py
-rw-r--r-- root/root 7431 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/export/mean_counts.py
-rw-r--r-- root/root 0 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/export/prot_table.py
-rw-r--r-- root/root 9072 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/fileDisplay.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/pytransit/genomes/
-rw-r--r-- root/root 4437109 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/BCG.fna
-rw-r--r-- root/root 375487 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/BCG.prot_table
-rw-r--r-- root/root 4474634 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37Rv.fna
-rw-r--r-- root/root 392954 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37Rv.prot_table
-rw-r--r-- root/root 4474815 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37RvBD.fna
-rw-r--r-- root/root 270695 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37RvBD.prot_table
-rw-r--r-- root/root 273441 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37RvBD_mod3.prot_table
-rw-r--r-- root/root 4473973 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37RvMA2.fna
-rw-r--r-- root/root 335664 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/H37RvMA2.prot_table
-rw-r--r-- root/root 1245 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/genomes.html
-rw-r--r-- root/root 7088449 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/mc2_155_tamu.fna
-rw-r--r-- root/root 639545 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/genomes/mc2_155_tamu.prot_table
-rw-r--r-- root/root 19972 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/images.py
-rw-r--r-- root/root 29474 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/norm_tools.py
-rw-r--r-- root/root 15294 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/qcDisplay.py
-rw-r--r-- root/root 27570 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/stat_tools.py
-rw-r--r-- root/root 50414 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/tnseq_tools.py
-rw-r--r-- root/root 81513 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/transit_gui.py
-rw-r--r-- root/root 18576 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/transit_tools.py
-rw-r--r-- root/root 14178 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/trash.py
-rw-r--r-- root/root 9138 2023-11-26 23:30 ./usr/lib/python3/dist-packages/pytransit/view_trash.py
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/tnseq_transit-3.3.3.egg-info/
-rw-r--r-- root/root 3935 2023-11-29 18:42 ./usr/lib/python3/dist-packages/tnseq_transit-3.3.3.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2023-11-29 18:42 ./usr/lib/python3/dist-packages/tnseq_transit-3.3.3.egg-info/dependency_links.txt
-rw-r--r-- root/root 86 2023-11-29 18:42 ./usr/lib/python3/dist-packages/tnseq_transit-3.3.3.egg-info/entry_points.txt
-rw-r--r-- root/root 0 2023-11-29 18:42 ./usr/lib/python3/dist-packages/tnseq_transit-3.3.3.egg-info/requires.txt
-rw-r--r-- root/root 16 2023-11-29 18:42 ./usr/lib/python3/dist-packages/tnseq_transit-3.3.3.egg-info/top_level.txt
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/share/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/share/doc/tnseq-transit/
-rw-r--r-- root/root 218 2023-11-29 18:42 ./usr/share/doc/tnseq-transit/README.Debian
-rw-r--r-- root/root 1677 2023-11-29 18:42 ./usr/share/doc/tnseq-transit/changelog.Debian.gz
-rw-r--r-- root/root 7760 2023-11-26 23:30 ./usr/share/doc/tnseq-transit/changelog.gz
-rw-r--r-- root/root 926 2023-11-29 18:42 ./usr/share/doc/tnseq-transit/copyright
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/share/man/
drwxr-xr-x root/root 0 2023-11-29 18:42 ./usr/share/man/man1/
-rw-r--r-- root/root 841 2023-11-29 18:42 ./usr/share/man/man1/transit-tpp.1.gz
-rw-r--r-- root/root 457 2023-11-29 18:42 ./usr/share/man/man1/transit.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 418660
Build-Time: 210
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 152
Job: tnseq-transit_3.3.3-1
Machine Architecture: arm64
Package: tnseq-transit
Package-Time: 377
Source-Version: 3.3.3-1
Space: 418660
Status: successful
Version: 3.3.3-1
--------------------------------------------------------------------------------
Finished at 2023-12-02T05:41:18Z
Build needed 00:06:17, 418660k disk space