tnseq-transit →
2.5.2-1 →
armhf → 2019-07-15 13:30:28
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| tnseq-transit 2.5.2-1 (armhf) Mon, 15 Jul 2019 13:07:04 +0000 |
+==============================================================================+
Package: tnseq-transit
Version: 2.5.2-1
Source Version: 2.5.2-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-626591f3-0b7e-4be2-ae32-a5af40a6ede3' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 24.4 MB in 31s (792 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'tnseq-transit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/tnseq-transit.git
Please use:
git clone https://salsa.debian.org/med-team/tnseq-transit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 20.7 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main tnseq-transit 2.5.2-1 (dsc) [2128 B]
Get:2 http://172.17.0.1/private bullseye-staging/main tnseq-transit 2.5.2-1 (tar) [20.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main tnseq-transit 2.5.2-1 (diff) [3320 B]
Fetched 20.7 MB in 10s (2129 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/tnseq-transit-vQ4oyV/tnseq-transit-2.5.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/tnseq-transit-vQ4oyV' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-iKeZ8m/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-iKeZ8m/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2474 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 24 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12050 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 12~), dh-python, python-dev, python-setuptools, python-numpy, python-scipy, python-pil, python-matplotlib, python-statsmodels, bwa
Filtered Build-Depends: debhelper (>= 12~), dh-python, python-dev, python-setuptools, python-numpy, python-scipy, python-pil, python-matplotlib, python-statsmodels, bwa
dpkg-deb: building package 'sbuild-build-depends-tnseq-transit-dummy' in '/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive/sbuild-build-depends-tnseq-transit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-tnseq-transit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Sources [551 B]
Get:5 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ Packages [630 B]
Fetched 2514 B in 1s (3372 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install tnseq-transit build dependencies (apt-based resolver)
-------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils bwa debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-lyx gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0
libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libfreetype6 libgfortran5 libglib2.0-0 libicu63 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 liblcms2-2
libmagic-mgc libmagic1 libmpdec2 libncurses6 libpipeline1 libpng16-16
libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libssl1.1 libtiff5
libtinfo5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libxml2 m4
man-db mime-support po-debconf python python-backports.functools-lru-cache
python-cycler python-dateutil python-decorator python-dev python-kiwisolver
python-matplotlib python-matplotlib2-data python-minimal python-numpy
python-pandas python-pandas-lib python-patsy python-pil python-pkg-resources
python-pyparsing python-scipy python-setuptools python-six
python-statsmodels python-statsmodels-lib python-subprocess32 python-tz
python2 python2-dev python2-minimal python2.7 python2.7-dev
python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal
python3.7 python3.7-minimal sensible-utils ttf-bitstream-vera
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation samtools dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libjs-jquery-ui-docs liblcms2-utils libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl python-doc python-tk python-cycler-doc dvipng ffmpeg
gir1.2-gtk-3.0 ghostscript inkscape ipython librsvg2-common python-cairocffi
python-configobj python-excelerator python-gi python-gobject-2
python-matplotlib2-doc python-nose python-qt4 python-sip python-tornado
python-traits python-wxgtk3.0 texlive-extra-utils texlive-latex-extra
ttf-staypuft gfortran python-pytest python-numpy-dbg python-numpy-doc
python-pandas-doc python-patsy-doc python-pil-doc python-pil-dbg
python-pyparsing-doc python-scipy-doc python-setuptools-doc
python-statsmodels-doc python2-doc python2.7-doc binfmt-support python3-doc
python3-tk python3-venv python3.7-venv python3.7-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs javascript-common libgpm2 libltdl-dev libmail-sendmail-perl
python-tk python-tables python-numexpr python-xlrd python-openpyxl
python-xlwt python-bs4 python-html5lib python-lxml python-olefile
python-joblib python-cvxopt
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils bwa debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-lyx gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0
libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libfreetype6 libgfortran5 libglib2.0-0 libicu63 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 liblcms2-2
libmagic-mgc libmagic1 libmpdec2 libncurses6 libpipeline1 libpng16-16
libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libssl1.1 libtiff5
libtinfo5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libxml2 m4
man-db mime-support po-debconf python python-backports.functools-lru-cache
python-cycler python-dateutil python-decorator python-dev python-kiwisolver
python-matplotlib python-matplotlib2-data python-minimal python-numpy
python-pandas python-pandas-lib python-patsy python-pil python-pkg-resources
python-pyparsing python-scipy python-setuptools python-six
python-statsmodels python-statsmodels-lib python-subprocess32 python-tz
python2 python2-dev python2-minimal python2.7 python2.7-dev
python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal
python3.7 python3.7-minimal sbuild-build-depends-tnseq-transit-dummy
sensible-utils ttf-bitstream-vera
0 upgraded, 106 newly installed, 0 to remove and 24 not upgraded.
Need to get 98.3 MB of archives.
After this operation, 301 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-iKeZ8m/apt_archive ./ sbuild-build-depends-tnseq-transit-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.9.1-2 [104 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20181013-2 [309 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.8.5-2 [1230 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-minimal armhf 2.7.16-2 [395 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf python2.7-minimal armhf 2.7.16-2 [1093 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf python2-minimal armhf 2.7.16-1 [41.4 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf python-minimal armhf 2.7.16-1 [21.0 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1c-1 [1259 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.62 [37.2 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.6-2 [77.1 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-stdlib armhf 2.7.16-2 [1844 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf python2.7 armhf 2.7.16-2 [305 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libpython2-stdlib armhf 2.7.16-1 [20.8 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libpython-stdlib armhf 2.7.16-1 [20.8 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf python2 armhf 2.7.16-1 [41.6 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf python armhf 2.7.16-1 [22.8 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.3-2 [583 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.3-2 [1464 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.3-1 [36.6 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.3-2 [1664 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.3-2 [330 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.3-1 [20.0 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.3-1 [61.5 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.35-4 [242 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.35-4 [110 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.35-4 [65.3 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
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Get:44 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
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Get:49 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.58.3-2 [1077 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
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Get:53 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20181013-2 [78.6 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.1.1 [1016 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.7.3-1 [76.7 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.7.3-1 [142 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 3.20190308 [99.3 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf fonts-lyx all 2.3.3-1 [199 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 8.3.0-6+rpi1 [206 kB]
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Get:68 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7 armhf 2.7.16-2 [873 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-dev armhf 2.7.16-2 [30.9 MB]
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Get:78 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
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Get:82 http://172.17.0.1/private bullseye-staging/main armhf python-backports.functools-lru-cache all 1.5-3 [6704 B]
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Get:84 http://172.17.0.1/private bullseye-staging/main armhf python-cycler all 0.10.0-1 [7448 B]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf python-dateutil all 2.7.3-3 [76.8 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf python-decorator all 4.3.0-1.1 [14.4 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf python2.7-dev armhf 2.7.16-2 [291 kB]
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Get:90 http://172.17.0.1/private bullseye-staging/main armhf python-pkg-resources all 41.0.1-1 [183 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf python-kiwisolver armhf 1.0.1-2+b1 [54.0 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib2-data all 2.2.3-6 [4124 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf python-pyparsing all 2.2.0+dfsg1-2 [89.5 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf python-tz all 2019.1-1 [33.6 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf python-numpy armhf 1:1.16.2-1 [1856 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf python-subprocess32 armhf 3.5.3-1 [28.9 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib armhf 2.2.3-6 [5006 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf python-pandas-lib armhf 0.23.3+dfsg-3 [2840 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf python-pandas all 0.23.3+dfsg-3 [1750 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf python-patsy all 0.5.0+git13-g54dcf7b-1 [172 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf python-pil armhf 6.1.0-1 [374 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf python-scipy armhf 1.1.0-7 [8941 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf python-setuptools all 41.0.1-1 [383 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf python-statsmodels-lib armhf 0.8.0-9 [295 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf python-statsmodels all 0.8.0-9 [7183 kB]
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Setting up file (1:5.35-4) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up libpython2.7-stdlib:armhf (2.7.16-2) ...
Setting up autotools-dev (20180224.1) ...
Setting up libexpat1-dev:armhf (2.2.6-2) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libncurses6:armhf (6.1+20181013-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libimagequant0:armhf (2.12.2-1.1) ...
Setting up libpng16-16:armhf (1.6.36-6) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libgfortran5:armhf (8.3.0-6+rpi1) ...
Setting up python-matplotlib2-data (2.2.3-6) ...
Setting up sensible-utils (0.0.12) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libtiff5:armhf (4.0.10-4) ...
Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up libjs-jquery (3.3.1~dfsg-3) ...
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up libbsd0:armhf (0.9.1-2) ...
Setting up libtinfo5:armhf (6.1+20181013-2) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Setting up libfile-stripnondeterminism-perl (1.1.2-1) ...
Setting up libpython3.7-stdlib:armhf (3.7.3-2) ...
Setting up libpython2.7:armhf (2.7.16-2) ...
Setting up libpython2.7-dev:armhf (2.7.16-2) ...
Setting up python2.7 (2.7.16-2) ...
Setting up libtool (2.4.6-9) ...
Setting up libpython2-stdlib:armhf (2.7.16-1) ...
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up m4 (1.4.18-2) ...
Setting up python2 (2.7.16-1) ...
Setting up libpython-stdlib:armhf (2.7.16-1) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up libfreetype6:armhf (2.9.1-3) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libcroco3:armhf (0.6.12-3) ...
Setting up autoconf (2.69-11) ...
Setting up dwz (0.12-3) ...
Setting up groff-base (1.22.4-3) ...
Setting up libpython2-dev:armhf (2.7.16-1) ...
Setting up python (2.7.16-1) ...
Setting up libpython3-stdlib:armhf (3.7.3-1) ...
Setting up python2.7-dev (2.7.16-2) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3.7 (3.7.3-2) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up gettext (0.19.8.1-9) ...
Setting up python2-dev (2.7.16-1) ...
Setting up python-pkg-resources (41.0.1-1) ...
Setting up python3 (3.7.3-1) ...
Setting up python-pil:armhf (6.1.0-1) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python-decorator (4.3.0-1.1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython-dev:armhf (2.7.16-1) ...
Setting up python-six (1.12.0-1) ...
Setting up python-pyparsing (2.2.0+dfsg1-2) ...
Setting up python-dateutil (2.7.3-3) ...
Setting up python-subprocess32 (3.5.3-1) ...
Setting up python-setuptools (41.0.1-1) ...
Setting up python-backports.functools-lru-cache (1.5-3) ...
Setting up python-tz (2019.1-1) ...
Setting up python-kiwisolver (1.0.1-2+b1) ...
Setting up python3-lib2to3 (3.7.3-1) ...
Setting up python-dev (2.7.16-1) ...
Setting up python3-distutils (3.7.3-1) ...
Setting up dh-python (3.20190308) ...
Setting up python-numpy (1:1.16.2-1) ...
Setting up po-debconf (1.0.21) ...
Setting up python-cycler (0.10.0-1) ...
Setting up python-patsy (0.5.0+git13-g54dcf7b-1) ...
Setting up python-statsmodels-lib (0.8.0-9) ...
Setting up python-scipy (1.1.0-7) ...
Setting up python-pandas-lib (0.23.3+dfsg-3) ...
Setting up python-matplotlib (2.2.3-6) ...
Setting up python-pandas (0.23.3+dfsg-3) ...
Setting up python-statsmodels (0.8.0-9) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.1.2-1) ...
Setting up debhelper (12.1.1) ...
Setting up sbuild-build-depends-tnseq-transit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-10+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-16+rpi1 dpkg-dev_1.19.7 g++-8_8.3.0-6+rpi1 gcc-8_8.3.0-6+rpi1 libc6-dev_2.28-10+rpi1 libstdc++-8-dev_8.3.0-6+rpi1 libstdc++6_8.3.0-6+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3+rpi1 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16+rpi1 binutils-arm-linux-gnueabihf_2.31.1-16+rpi1 binutils-common_2.31.1-16+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.6 bwa_0.6.2-1 bzip2_1.0.6-9.1 coreutils_8.30-3 cpp_4:8.3.0-1+rpi2 cpp-8_8.3.0-6+rpi1 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-python_3.20190308 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dirmngr_2.2.12-1+rpi1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 fonts-lyx_2.3.3-1 g++_4:8.3.0-1+rpi2 g++-8_8.3.0-6+rpi1 gcc_4:8.3.0-1+rpi2 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-6-base_6.5.0-1+rpi1+b1 gcc-7-base_7.3.0-19 gcc-8_8.3.0-6+rpi1 gcc-8-base_8.3.0-6+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.2 libarchive-zip-perl_1.64-1 libasan5_8.3.0-6+rpi1 libassuan0_2.5.2-1 libatomic1_8.3.0-6+rpi1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libbinutils_2.31.1-16+rpi1 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9.1 libc-bin_2.28-10+rpi1 libc-dev-bin_2.28-10+rpi1 libc6_2.28-10+rpi1 libc6-dev_2.28-10+rpi1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-6+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.5 libdebconfclient0_0.249 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.6-2 libexpat1-dev_2.2.6-2 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.2-1 libfreetype6_2.9.1-3 libgcc-8-dev_8.3.0-6+rpi1 libgcc1_1:8.3.0-6+rpi1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libgfortran5_8.3.0-6+rpi1 libglib2.0-0_2.58.3-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-4 libgomp1_8.3.0-6+rpi1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.2-2 libidn2-0_2.0.5-1 libimagequant0_2.12.2-1.1 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libjs-jquery_3.3.1~dfsg-3 libjs-jquery-ui_1.12.1+dfsg-5 libksba8_1.3.5-2 liblapack3_3.8.0-2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.47+dfsg-3+rpi1 libldap-common_2.4.47+dfsg-3+rpi1 liblocale-gettext-perl_1.07-3+b3 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnpth0_1.6-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpng16-16_1.6.36-6 libpython-dev_2.7.16-1 libpython-stdlib_2.7.16-1 libpython2-dev_2.7.16-1 libpython2-stdlib_2.7.16-1 libpython2.7_2.7.16-2 libpython2.7-dev_2.7.16-2 libpython2.7-minimal_2.7.16-2 libpython2.7-stdlib_2.7.16-2 libpython3-stdlib_3.7.3-1 libpython3.7-minimal_3.7.3-2 libpython3.7-stdlib_3.7.3-2 libreadline7_7.0-5 libsasl2-2_2.1.27+dfsg-1+b1 libsasl2-modules-db_2.1.27+dfsg-1+b1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.27.2-3 libss2_1.44.5-1 libssl1.1_1.1.1c-1 libstdc++-8-dev_8.3.0-6+rpi1 libstdc++6_8.3.0-6+rpi1 libsystemd0_241-5+rpi1 libtasn1-6_4.13-3 libtext-charwidth-perl_0.04-7.1+b1 libtext-iconv-perl_1.7-5+b10 libtext-wrapi18n-perl_0.06-7.1 libtiff5_4.0.10-4 libtinfo5_6.1+20181013-2 libtinfo6_6.1+20181013-2 libtool_2.4.6-9 libubsan1_8.3.0-6+rpi1 libuchardet0_0.0.6-3 libudev1_241-5+rpi1 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libxml2_2.9.4+dfsg1-7+b1 libzstd1_1.3.8+dfsg-3+rpi1 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2019051400+rpi1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17 mime-support_3.62 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 netbase_5.6 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pinentry-curses_1.1.0-2 po-debconf_1.0.21 python_2.7.16-1 python-backports.functools-lru-cache_1.5-3 python-cycler_0.10.0-1 python-dateutil_2.7.3-3 python-decorator_4.3.0-1.1 python-dev_2.7.16-1 python-kiwisolver_1.0.1-2+b1 python-matplotlib_2.2.3-6 python-matplotlib2-data_2.2.3-6 python-minimal_2.7.16-1 python-numpy_1:1.16.2-1 python-pandas_0.23.3+dfsg-3 python-pandas-lib_0.23.3+dfsg-3 python-patsy_0.5.0+git13-g54dcf7b-1 python-pil_6.1.0-1 python-pkg-resources_41.0.1-1 python-pyparsing_2.2.0+dfsg1-2 python-scipy_1.1.0-7 python-setuptools_41.0.1-1 python-six_1.12.0-1 python-statsmodels_0.8.0-9 python-statsmodels-lib_0.8.0-9 python-subprocess32_3.5.3-1 python-tz_2019.1-1 python2_2.7.16-1 python2-dev_2.7.16-1 python2-minimal_2.7.16-1 python2.7_2.7.16-2 python2.7-dev_2.7.16-2 python2.7-minimal_2.7.16-2 python3_3.7.3-1 python3-distutils_3.7.3-1 python3-lib2to3_3.7.3-1 python3-minimal_3.7.3-1 python3.7_3.7.3-2 python3.7-minimal_3.7.3-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-tnseq-transit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 ttf-bitstream-vera_1.10-8 tzdata_2019a-1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Jul 9 13:42:50 2019 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./tnseq-transit_2.5.2-1.dsc
dpkg-source: info: extracting tnseq-transit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking tnseq-transit_2.5.2.orig.tar.gz
dpkg-source: info: unpacking tnseq-transit_2.5.2-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying skip_test_requiring_non_existing_input_data.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-626591f3-0b7e-4be2-ae32-a5af40a6ede3
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package tnseq-transit
dpkg-buildpackage: info: source version 2.5.2-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with python2 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
if [ -e tests_invalid_data/H37Rv.fna ] ; then \
mv tests_invalid_data/H37Rv.fna tests ; \
rmdir tests_invalid_data ; \
fi
dh_auto_clean
I: pybuild base:217: python2.7 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules build-arch
dh build-arch --with python2 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p tests_invalid_data
mv tests/H37Rv.fna tests_invalid_data
dh_auto_configure
I: pybuild base:217: python2.7 setup.py config
running config
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/tpp_gui.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/tpp_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/draw_trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/fileDisplay.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/images.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/norm_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/qcDisplay.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/stat_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/tnseq_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/transit_gui.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/transit_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/view_trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/anova.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/binomial.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/example.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/gi.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/griffin.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/gumbel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/hmm.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/norm.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/normalize.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/pathway_enrichment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/rankproduct.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/resampling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/tn5gaps.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/tnseq_stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/utest.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/winsorize.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/zinb.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert
copying src/pytransit/convert/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert
copying src/pytransit/convert/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert
copying src/pytransit/convert/gff_to_prot_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/combined_wig.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/igv.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/mean_counts.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/prot_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
running egg_info
creating tnseq_transit.egg-info
writing requirements to tnseq_transit.egg-info/requires.txt
writing tnseq_transit.egg-info/PKG-INFO
writing top-level names to tnseq_transit.egg-info/top_level.txt
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'VERSION'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/GO_associated_Rvs.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep3.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_glycerol_combined.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg_covar.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg_interactions.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/BCG.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/BCG.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD_mod3.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/genomes.html -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:217: cd /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build; python2.7 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --with python2 --buildsystem=pybuild
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py install --root /<<PKGBUILDDIR>>/debian/tnseq-transit
running install
running build
running build_py
running egg_info
writing requirements to tnseq_transit.egg-info/requires.txt
writing tnseq_transit.egg-info/PKG-INFO
writing top-level names to tnseq_transit.egg-info/top_level.txt
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'VERSION'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
running install_lib
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/__main__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/tpp_gui.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/tpp_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/__main__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/draw_trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/fileDisplay.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/images.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/norm_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/qcDisplay.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/stat_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/tnseq_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/transit_gui.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/transit_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/view_trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/anova.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/binomial.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/example.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/gi.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/griffin.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/gumbel.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/hmm.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/norm.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/normalize.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/pathway_enrichment.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/rankproduct.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/resampling.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/tn5gaps.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/tnseq_stats.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/utest.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/winsorize.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/zinb.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/convert/gff_to_prot_table.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/combined_wig.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/igv.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/mean_counts.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/prot_table.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/GO_associated_Rvs.csv -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_rep3.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_glycerol_combined.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/glycerol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/glycerol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/glycerol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/samples_metadata_cg.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/samples_metadata_cg_covar.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/samples_metadata_cg_interactions.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/BCG.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/BCG.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37Rv.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37Rv.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvBD.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvBD.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvBD_mod3.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvMA2.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvMA2.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/genomes.html -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/mc2_155_tamu.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/mc2_155_tamu.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/__main__.py to __main__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/tpp_gui.py to tpp_gui.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/tpp_tools.py to tpp_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/__main__.py to __main__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/draw_trash.py to draw_trash.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/fileDisplay.py to fileDisplay.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/images.py to images.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/norm_tools.py to norm_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/qcDisplay.py to qcDisplay.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/stat_tools.py to stat_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/tnseq_tools.py to tnseq_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/transit_gui.py to transit_gui.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/transit_tools.py to transit_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/trash.py to trash.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/view_trash.py to view_trash.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/anova.py to anova.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/base.py to base.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/binomial.py to binomial.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/example.py to example.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/gi.py to gi.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/griffin.py to griffin.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/gumbel.py to gumbel.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/hmm.py to hmm.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/norm.py to norm.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/normalize.py to normalize.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/pathway_enrichment.py to pathway_enrichment.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/rankproduct.py to rankproduct.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/resampling.py to resampling.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/tn5gaps.py to tn5gaps.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/tnseq_stats.py to tnseq_stats.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/utest.py to utest.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/winsorize.py to winsorize.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/zinb.py to zinb.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert/base.py to base.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/convert/gff_to_prot_table.py to gff_to_prot_table.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/base.py to base.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/combined_wig.py to combined_wig.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/igv.py to igv.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/mean_counts.py to mean_counts.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/prot_table.py to prot_table.pyc
running install_egg_info
Copying tnseq_transit.egg-info to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/tnseq_transit-2.5.2.egg-info
Skipping SOURCES.txt
running install_scripts
Installing transit script to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/bin
Installing tpp script to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/bin
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
mv debian/tnseq-transit/usr/bin/tpp debian/tnseq-transit/usr/bin/transit-tpp
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 tools:114: replacing shebang in debian/tnseq-transit/usr/bin/transit
I: dh_python2 tools:114: replacing shebang in debian/tnseq-transit/usr/bin/transit-tpp
dh_installinit -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package tnseq-transit: substitution variable ${python:Versions} unused, but is defined
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'tnseq-transit' in '../tnseq-transit_2.5.2-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../tnseq-transit_2.5.2-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-07-15T13:30:13Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
tnseq-transit_2.5.2-1_armhf.changes:
------------------------------------
Format: 1.8
Date: Tue, 09 Jul 2019 15:21:53 +0200
Source: tnseq-transit
Binary: tnseq-transit
Architecture: armhf
Version: 2.5.2-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
tnseq-transit - statistical calculations of essentiality of genes or genomic regi
Changes:
tnseq-transit (2.5.2-1) unstable; urgency=medium
.
* New upstream version
* Asked upstrem for Python3 port
https://github.com/mad-lab/transit/issues/20
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Checksums-Sha256:
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Files:
dd1ce6673fd22d5b30ed6c28b0155d25 6446 science optional tnseq-transit_2.5.2-1_armhf.buildinfo
77605257a9b3513eb386f628bc1d4d33 6095424 science optional tnseq-transit_2.5.2-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
tnseq-transit_2.5.2-1_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 6095424 bytes: control archive=3476 bytes.
1390 bytes, 28 lines control
7764 bytes, 81 lines md5sums
163 bytes, 9 lines * postinst #!/bin/sh
265 bytes, 14 lines * prerm #!/bin/sh
Package: tnseq-transit
Version: 2.5.2-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 36057
Depends: python-matplotlib, python-numpy, python-pil, python-pkg-resources, python-scipy, python-statsmodels, python:any (<< 2.8), python:any (>= 2.7~), python-wxgtk3.0, bwa
Breaks: transit
Replaces: transit
Provides: transit
Section: science
Priority: optional
Homepage: http://saclab.tamu.edu/essentiality/transit/
Description: statistical calculations of essentiality of genes or genomic regions
This is a software that can be used to analyze Tn-Seq datasets. It
includes various statistical calculations of essentiality of genes or
genomic regions (including conditional essentiality between 2
conditions). These methods were developed and tested as a collaboration
between the Sassetti lab (UMass) and the Ioerger lab (Texas A&M)
.
TRANSIT is capable of analyzing TnSeq libraries constructed with Himar1
or Tn5 datasets.
.
TRANSIT assumes you have already done pre-processing of raw sequencing
files (.fastq) and extracted read counts into a .wig formatted file.
The .wig file should contain the counts at all sites where an insertion
could take place (including sites with no reads). For Himar1 datasets
this is all TA sites in the genome. For Tn5 datasets this would be all
nucleotides in the genome.
drwxr-xr-x root/root 0 2019-07-09 13:21 ./
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/bin/
-rwxr-xr-x root/root 401 2019-07-09 13:21 ./usr/bin/transit
-rwxr-xr-x root/root 393 2019-07-09 13:21 ./usr/bin/transit-tpp
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytpp/
-rw-r--r-- root/root 1 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytpp/__init__.py
-rw-r--r-- root/root 3448 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytpp/__main__.py
-rw-r--r-- root/root 25735 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytpp/tpp_gui.py
-rw-r--r-- root/root 56300 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytpp/tpp_tools.py
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytransit/
-rw-r--r-- root/root 119 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/__init__.py
-rw-r--r-- root/root 4798 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/__main__.py
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytransit/analysis/
-rw-r--r-- root/root 1445 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/__init__.py
-rw-r--r-- root/root 9471 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/anova.py
-rw-r--r-- root/root 18838 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/base.py
-rw-r--r-- root/root 20685 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/binomial.py
-rw-r--r-- root/root 7590 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/example.py
-rw-r--r-- root/root 36719 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/gi.py
-rw-r--r-- root/root 10048 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/griffin.py
-rw-r--r-- root/root 21232 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/gumbel.py
-rw-r--r-- root/root 22154 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/hmm.py
-rw-r--r-- root/root 3900 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/norm.py
-rw-r--r-- root/root 5101 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/normalize.py
-rw-r--r-- root/root 16322 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/pathway_enrichment.py
-rw-r--r-- root/root 13682 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/rankproduct.py
-rw-r--r-- root/root 30437 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/resampling.py
-rw-r--r-- root/root 15245 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/tn5gaps.py
-rw-r--r-- root/root 4550 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/tnseq_stats.py
-rw-r--r-- root/root 14622 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/utest.py
-rw-r--r-- root/root 3598 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/winsorize.py
-rw-r--r-- root/root 25400 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/analysis/zinb.py
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytransit/convert/
-rw-r--r-- root/root 307 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/convert/__init__.py
-rw-r--r-- root/root 5986 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/convert/base.py
-rw-r--r-- root/root 5523 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/convert/gff_to_prot_table.py
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytransit/data/
-rw-r--r-- root/root 285249 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/GO_associated_Rvs.csv
-rw-r--r-- root/root 32738 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/H37Rv.sanger_associated_RVS.csv
-rw-r--r-- root/root 785384 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_merged.wig
-rw-r--r-- root/root 766014 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_rep1.wig
-rw-r--r-- root/root 762998 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_rep2.wig
-rw-r--r-- root/root 757561 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_rep3.wig
-rw-r--r-- root/root 3189503 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_glycerol_combined.dat
-rw-r--r-- root/root 789627 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/glycerol_H37Rv_merged.wig
-rw-r--r-- root/root 766649 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/glycerol_H37Rv_rep1.wig
-rw-r--r-- root/root 779802 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/glycerol_H37Rv_rep2.wig
-rw-r--r-- root/root 315 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/samples_metadata_cg.txt
-rw-r--r-- root/root 342 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/samples_metadata_cg_covar.txt
-rw-r--r-- root/root 364 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/data/samples_metadata_cg_interactions.txt
-rw-r--r-- root/root 12643 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/draw_trash.py
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytransit/export/
-rw-r--r-- root/root 414 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/export/__init__.py
-rw-r--r-- root/root 8396 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/export/base.py
-rw-r--r-- root/root 6709 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/export/combined_wig.py
-rw-r--r-- root/root 6241 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/export/igv.py
-rw-r--r-- root/root 6567 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/export/mean_counts.py
-rw-r--r-- root/root 0 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/export/prot_table.py
-rw-r--r-- root/root 9061 2019-05-16 18:04 ./usr/lib/python2.7/dist-packages/pytransit/fileDisplay.py
drwxr-xr-x root/root 0 2019-07-09 13:21 ./usr/lib/python2.7/dist-packages/pytransit/genomes/
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| Post Build |
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| Cleanup |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
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| Summary |
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Build Architecture: armhf
Build-Space: 130552
Build-Time: 235
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1082
Job: tnseq-transit_2.5.2-1
Machine Architecture: armhf
Package: tnseq-transit
Package-Time: 1389
Source-Version: 2.5.2-1
Space: 130552
Status: successful
Version: 2.5.2-1
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Finished at 2019-07-15T13:30:13Z
Build needed 00:23:09, 130552k disc space