Raspbian Package Auto-Building

Build log for tnseq-transit (2.3.4-1) on armhf

tnseq-transit2.3.4-1armhf → 2019-02-05 05:24:40

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard

+==============================================================================+
| tnseq-transit 2.3.4-1 (armhf)                Tue, 05 Feb 2019 05:02:44 +0000 |
+==============================================================================+

Package: tnseq-transit
Version: 2.3.4-1
Source Version: 2.3.4-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-fc8e0b50-c230-4485-ba26-6e463cffc6ae' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.3 MB in 31s (784 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'tnseq-transit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/tnseq-transit.git
Please use:
git clone https://salsa.debian.org/med-team/tnseq-transit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 18.6 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main tnseq-transit 2.3.4-1 (dsc) [2128 B]
Get:2 http://172.17.0.1/private buster-staging/main tnseq-transit 2.3.4-1 (tar) [18.6 MB]
Get:3 http://172.17.0.1/private buster-staging/main tnseq-transit 2.3.4-1 (diff) [3232 B]
Fetched 18.6 MB in 6s (2910 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/tnseq-transit-nBAw1g/tnseq-transit-2.3.4' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/tnseq-transit-nBAw1g' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-83uPGe/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-83uPGe/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-83uPGe/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2989 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
  libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 libnss-systemd libpam-systemd libssl1.1 openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 17 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (12.4 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15817 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 12~), dh-python, python-dev, python-setuptools, python-numpy, python-scipy, python-pil, python-matplotlib, python-statsmodels, bwa
Filtered Build-Depends: debhelper (>= 12~), dh-python, python-dev, python-setuptools, python-numpy, python-scipy, python-pil, python-matplotlib, python-statsmodels, bwa
dpkg-deb: building package 'sbuild-build-depends-tnseq-transit-dummy' in '/<<BUILDDIR>>/resolver-83uPGe/apt_archive/sbuild-build-depends-tnseq-transit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-tnseq-transit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Sources [551 B]
Get:5 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ Packages [632 B]
Fetched 2516 B in 1s (3467 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install tnseq-transit build dependencies (apt-based resolver)
-------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales
  libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils bwa cpp-8 debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-lyx g++-8
  gcc-8 gcc-8-base gettext gettext-base groff-base intltool-debian
  libarchive-zip-perl libasan5 libatomic1 libblas3 libbsd0 libcc1-0 libcroco3
  libelf1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6
  libgcc-8-dev libgcc1 libgfortran5 libglib2.0-0 libgomp1 libicu63
  libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui
  liblapack3 liblcms2-2 libmagic-mgc libmagic1 libmpdec2 libpipeline1
  libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
  libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libstdc++-8-dev
  libstdc++6 libtiff5 libtool libubsan1 libuchardet0 libwebp6 libwebpdemux2
  libwebpmux3 libxml2 m4 man-db mime-support po-debconf python
  python-backports.functools-lru-cache python-cycler python-dateutil
  python-decorator python-dev python-kiwisolver python-matplotlib
  python-matplotlib2-data python-minimal python-numpy python-pandas
  python-pandas-lib python-patsy python-pil python-pkg-resources
  python-pyparsing python-scipy python-setuptools python-six
  python-statsmodels python-statsmodels-lib python-subprocess32 python-tz
  python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal
  python3.7 python3.7-minimal ttf-bitstream-vera
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation samtools gcc-8-locales dh-make gcc-8-doc libstdc++6-8-dbg
  libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan5-dbg
  liblsan0-dbg libtsan0-dbg libubsan1-dbg libmpx2-dbg libquadmath0-dbg
  gettext-doc libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs
  liblcms2-utils libstdc++-8-doc libtool-doc gfortran | fortran95-compiler
  gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc
  python-tk python-cycler-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript
  inkscape ipython librsvg2-common python-cairocffi python-configobj
  python-excelerator python-gi python-gobject-2 python-matplotlib2-doc
  python-nose python-qt4 python-sip python-tornado python-traits
  python-wxgtk3.0 texlive-extra-utils texlive-latex-extra ttf-staypuft
  gfortran python-pytest python-numpy-dbg python-numpy-doc python-pandas-doc
  python-patsy-doc python-pil-doc python-pil-dbg python-pyparsing-doc
  python-scipy-doc python-setuptools-doc python-statsmodels-doc python2-doc
  python2.7-doc binfmt-support python3-doc python3-tk python3-venv
  python3.7-venv python3.7-doc
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs javascript-common libltdl-dev libmail-sendmail-perl python-tk
  python-tables python-numexpr python-xlrd python-openpyxl python-xlwt
  python-bs4 python-html5lib python-lxml python-olefile python-joblib
  python-cvxopt
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils bwa debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-lyx gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0
  libcroco3 libelf1 libexpat1-dev libfile-stripnondeterminism-perl
  libfreetype6 libgfortran5 libglib2.0-0 libicu63 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 liblcms2-2
  libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib
  libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
  libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libtiff5 libtool
  libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libxml2 m4 man-db
  mime-support po-debconf python python-backports.functools-lru-cache
  python-cycler python-dateutil python-decorator python-dev python-kiwisolver
  python-matplotlib python-matplotlib2-data python-minimal python-numpy
  python-pandas python-pandas-lib python-patsy python-pil python-pkg-resources
  python-pyparsing python-scipy python-setuptools python-six
  python-statsmodels python-statsmodels-lib python-subprocess32 python-tz
  python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal
  python3.7 python3.7-minimal sbuild-build-depends-tnseq-transit-dummy
  ttf-bitstream-vera
The following packages will be upgraded:
  cpp-8 g++-8 gcc-8 gcc-8-base libasan5 libatomic1 libcc1-0 libgcc-8-dev
  libgcc1 libgomp1 libstdc++-8-dev libstdc++6 libubsan1
13 upgraded, 100 newly installed, 0 to remove and 4 not upgraded.
Need to get 123 MB/124 MB of archives.
After this operation, 301 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-83uPGe/apt_archive ./ sbuild-build-depends-tnseq-transit-dummy 0.invalid.0 [916 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 8.2.0-15+rpi1 [37.9 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf gcc-8-base armhf 8.2.0-15+rpi1 [189 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:8.2.0-15+rpi1 [36.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 8.2.0-15+rpi1 [64.3 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 8.2.0-15+rpi1 [8104 B]
Get:9 http://172.17.0.1/private buster-staging/main armhf libasan5 armhf 8.2.0-15+rpi1 [318 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libubsan1 armhf 8.2.0-15+rpi1 [104 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf g++-8 armhf 8.2.0-15+rpi1 [7459 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libstdc++-8-dev armhf 8.2.0-15+rpi1 [1568 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libgcc-8-dev armhf 8.2.0-15+rpi1 [3750 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf gcc-8 armhf 8.2.0-15+rpi1 [7213 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf cpp-8 armhf 8.2.0-15+rpi1 [6788 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 8.2.0-15+rpi1 [325 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-1 [26.6 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-1 [1231 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-5 [394 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-5 [1089 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf python2-minimal armhf 2.7.15-4 [41.4 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15-4 [21.0 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-5 [1844 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-5 [299 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libpython2-stdlib armhf 2.7.15-4 [20.8 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15-4 [20.8 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf python2 armhf 2.7.15-4 [41.6 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15-4 [22.8 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.2-1 [582 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.2-1 [1454 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.2-1 [36.6 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.2-1 [1663 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.2-1 [323 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.2-1 [20.0 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.2-1 [61.5 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-2 [242 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-2 [109 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-2 [65.1 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf bwa armhf 0.6.2-1 [164 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.0-1 [12.6 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.2-3 [1076 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf debhelper all 12 [1002 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.2-3 [76.7 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.2-3 [142 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180927 [95.8 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf fonts-lyx all 2.3.2-1 [199 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-15+rpi1 [206 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libimagequant0 armhf 2.12.2-1 [27.1 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libjs-jquery all 3.3.1~dfsg-1 [332 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.15-5 [871 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.15-5 [30.8 MB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libpython2-dev armhf 2.7.15-4 [20.9 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.15-4 [20.9 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-3 [235 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf python-backports.functools-lru-cache all 1.5-1 [6456 B]
Get:86 http://172.17.0.1/private buster-staging/main armhf python-six all 1.12.0-1 [15.7 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf python-cycler all 0.10.0-1 [7448 B]
Get:88 http://172.17.0.1/private buster-staging/main armhf python-dateutil all 2.6.1-1 [61.1 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf python-decorator all 4.3.0-1.1 [14.4 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.15-5 [289 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf python2-dev armhf 2.7.15-4 [1212 B]
Get:92 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.15-4 [1188 B]
Get:93 http://172.17.0.1/private buster-staging/main armhf python-pkg-resources all 40.6.3-1 [181 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf python-kiwisolver armhf 1.0.1-2+b1 [54.0 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf python-matplotlib2-data all 2.2.3-5 [4124 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf python-pyparsing all 2.2.0+dfsg1-2 [89.5 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf python-tz all 2018.9-1 [33.5 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.16.1-1 [1855 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf python-subprocess32 armhf 3.5.3-1 [28.9 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf python-matplotlib armhf 2.2.3-5 [5005 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf python-pandas-lib armhf 0.23.3-1+b1 [2931 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf python-pandas all 0.23.3-1 [1743 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf python-patsy all 0.5.0+git13-g54dcf7b-1 [172 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf python-pil armhf 5.4.1-1 [364 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf python-scipy armhf 1.1.0-2 [8980 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf python-setuptools all 40.6.3-1 [380 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf python-statsmodels-lib armhf 0.8.0-7+b1 [298 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf python-statsmodels all 0.8.0-7 [6663 kB]
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Unpacking sbuild-build-depends-tnseq-transit-dummy (0.invalid.0) ...
Setting up cpp-8 (8.2.0-15+rpi1) ...
Setting up libgomp1:armhf (8.2.0-15+rpi1) ...
Setting up libjs-jquery (3.3.1~dfsg-1) ...
Setting up libatomic1:armhf (8.2.0-15+rpi1) ...
Setting up libcc1-0:armhf (8.2.0-15+rpi1) ...
Setting up bwa (0.6.2-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libarchive-zip-perl (1.64-1) ...
Setting up mime-support (3.61) ...
Installing new version of config file /etc/mime.types ...
Setting up libicu63:armhf (63.1-6) ...
Setting up liblcms2-2:armhf (2.9-3) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libimagequant0:armhf (2.12.2-1) ...
Setting up libelf1:armhf (0.175-2) ...
Setting up libglib2.0-0:armhf (2.58.2-3) ...
No schema files found: removed existing output file.
Setting up gettext-base (0.19.8.1-9) ...
Setting up libpipeline1:armhf (1.5.1-1) ...
Setting up m4 (1.4.18-2) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libfreetype6:armhf (2.9.1-3) ...
Setting up libmagic-mgc (1:5.35-2) ...
Setting up libmagic1:armhf (1:5.35-2) ...
Setting up libcroco3:armhf (0.6.12-3) ...
Processing triggers for libc-bin (2.28-5+rpi1) ...
Setting up dwz (0.12-3) ...
Setting up autotools-dev (20180224.1) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up libexpat1-dev:armhf (2.2.6-1) ...
Setting up ttf-bitstream-vera (1.10-8) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libasan5:armhf (8.2.0-15+rpi1) ...
Setting up libgfortran5:armhf (8.2.0-15+rpi1) ...
Setting up libpython2.7-stdlib:armhf (2.7.15-5) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up fonts-lyx (2.3.2-1) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libfile-stripnondeterminism-perl (1.1.0-1) ...
Setting up libubsan1:armhf (8.2.0-15+rpi1) ...
Setting up libpython3.7-stdlib:armhf (3.7.2-1) ...
Setting up gettext (0.19.8.1-9) ...
Setting up groff-base (1.22.4-2) ...
Setting up python2.7 (2.7.15-5) ...
Setting up libtiff5:armhf (4.0.10-3) ...
Setting up python3.7 (3.7.2-1) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.35-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up python-matplotlib2-data (2.2.3-5) ...
Setting up libpython2.7:armhf (2.7.15-5) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up man-db (2.8.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libpython2-stdlib:armhf (2.7.15-4) ...
Setting up libgcc-8-dev:armhf (8.2.0-15+rpi1) ...
Setting up libpython2.7-dev:armhf (2.7.15-5) ...
Setting up python2.7-dev (2.7.15-5) ...
Setting up libtool (2.4.6-9) ...
Setting up libpython3-stdlib:armhf (3.7.2-1) ...
Setting up libstdc++-8-dev:armhf (8.2.0-15+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up python3 (3.7.2-1) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up python2 (2.7.15-4) ...
Setting up gcc-8 (8.2.0-15+rpi1) ...
Setting up libpython2-dev:armhf (2.7.15-4) ...
Setting up g++-8 (8.2.0-15+rpi1) ...
Setting up libpython-stdlib:armhf (2.7.15-4) ...
Setting up python2-dev (2.7.15-4) ...
Setting up python3-lib2to3 (3.7.2-3) ...
Setting up python3-distutils (3.7.2-3) ...
Setting up python (2.7.15-4) ...
Setting up python-pyparsing (2.2.0+dfsg1-2) ...
Setting up libpython-dev:armhf (2.7.15-4) ...
Setting up python-backports.functools-lru-cache (1.5-1) ...
Setting up python-dev (2.7.15-4) ...
Setting up python-tz (2018.9-1) ...
Setting up python-pkg-resources (40.6.3-1) ...
Setting up python-numpy (1:1.16.1-1) ...
Setting up python-six (1.12.0-1) ...
Setting up python-pandas-lib (0.23.3-1+b1) ...
Setting up python-statsmodels-lib (0.8.0-7+b1) ...
Setting up python-decorator (4.3.0-1.1) ...
Setting up python-subprocess32 (3.5.3-1) ...
Setting up dh-python (3.20180927) ...
Setting up python-pil:armhf (5.4.1-1) ...
Setting up python-patsy (0.5.0+git13-g54dcf7b-1) ...
Setting up python-setuptools (40.6.3-1) ...
Setting up python-kiwisolver (1.0.1-2+b1) ...
Setting up python-scipy (1.1.0-2) ...
Setting up python-cycler (0.10.0-1) ...
Setting up python-dateutil (2.6.1-1) ...
Setting up python-pandas (0.23.3-1) ...
Setting up python-matplotlib (2.2.3-5) ...
Setting up python-statsmodels (0.8.0-7) ...
Setting up dh-strip-nondeterminism (1.1.0-1) ...
Setting up debhelper (12) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-tnseq-transit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-15+rpi1 gcc-8_8.2.0-15+rpi1 libc6-dev_2.28-5+rpi1 libstdc++-8-dev_8.2.0-15+rpi1 libstdc++6_8.2.0-15+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~beta1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bwa_0.6.2-1 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-15+rpi1 dash_0.5.10.2-5 dbus_1.12.12-1 dbus-user-session_1.12.12-1 debconf_1.5.70 debhelper_12 debianutils_4.8.6.1 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-1 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fonts-lyx_2.3.2-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-15+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-15+rpi1 gcc-8-base_8.2.0-15+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.5 klibc-utils_2.0.4-15+rpi1 kmod_25-2 krb5-locales_1.17-1 libacl1_2.2.52-3 libapparmor1_2.13.2-3 libapt-pkg5.0_1.8.0~beta1 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-15+rpi1 libassuan0_2.5.2-1 libatomic1_8.2.0-15+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libbinutils_2.31.1-11+rpi1 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-5+rpi1 libc-dev-bin_2.28-5+rpi1 libc6_2.28-5+rpi1 libc6-dev_2.28-5+rpi1 libcap-ng0_0.7.9-2 libcap2_1:2.25-1.2 libcc1-0_8.2.0-15+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.6-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.12-1 libdebconfclient0_0.246 libdevmapper1.02.1_2:1.02.155-1 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libelf1_0.175-2 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.0-1 libfreetype6_2.9.1-3 libgcc-8-dev_8.2.0-15+rpi1 libgcc1_1:8.2.0-15+rpi1 libgcrypt20_1.8.4-4 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgfortran5_8.2.0-15+rpi1 libglib2.0-0_2.58.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2+rpi1 libgomp1_8.2.0-15+rpi1 libgpg-error-l10n_1.33-3 libgpg-error0_1.33-3 libgssapi-krb5-2_1.17-1 libhogweed4_3.4.1~rc1-1 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libimagequant0_2.12.2-1 libip4tc0_1.8.2-3 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libjs-jquery_3.3.1~dfsg-1 libjs-jquery-ui_1.12.1+dfsg-5 libjson-c3_0.12.1-1.3 libk5crypto3_1.17-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-15+rpi1 libkmod2_25-2 libkrb5-3_1.17-1 libkrb5support0_1.17-1 libksba8_1.3.5-2 liblapack3_3.8.0-2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.47+dfsg-2 libldap-common_2.4.47+dfsg-2 liblz4-1_1.8.3-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2~rc1-1 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnpth0_1.6-1 libnss-systemd_240-4+rpi1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam-systemd_240-4+rpi1 libpam0g_1.1.8-4 libpcre3_2:8.39-11+rpi1 libperl5.24_5.24.1-4 libperl5.28_5.28.1-3 libpipeline1_1.5.1-1 libplymouth4_0.9.4-1 libpng16-16_1.6.36-2 libprocps7_2:3.3.15-2 libpython-dev_2.7.15-4 libpython-stdlib_2.7.15-4 libpython2-dev_2.7.15-4 libpython2-stdlib_2.7.15-4 libpython2.7_2.7.15-5 libpython2.7-dev_2.7.15-5 libpython2.7-minimal_2.7.15-5 libpython2.7-stdlib_2.7.15-5 libpython3-stdlib_3.7.2-1 libpython3.7-minimal_3.7.2-1 libpython3.7-stdlib_3.7.2-1 libreadline7_7.0-5 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-3+b1 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-15+rpi1 libstdc++6_8.2.0-15+rpi1 libsystemd0_240-4+rpi1 libtasn1-6_4.13-3 libtiff5_4.0.10-3 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtool_2.4.6-9 libubsan1_8.2.0-15+rpi1 libuchardet0_0.0.6-3 libudev1_240-4+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libxml2_2.9.4+dfsg1-7+b1 libzstd1_1.3.8+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-1 mawk_1.3.3-17 mime-support_3.61 mount_2.33.1-0.1 multiarch-support_2.28-5+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 python_2.7.15-4 python-backports.functools-lru-cache_1.5-1 python-cycler_0.10.0-1 python-dateutil_2.6.1-1 python-decorator_4.3.0-1.1 python-dev_2.7.15-4 python-kiwisolver_1.0.1-2+b1 python-matplotlib_2.2.3-5 python-matplotlib2-data_2.2.3-5 python-minimal_2.7.15-4 python-numpy_1:1.16.1-1 python-pandas_0.23.3-1 python-pandas-lib_0.23.3-1+b1 python-patsy_0.5.0+git13-g54dcf7b-1 python-pil_5.4.1-1 python-pkg-resources_40.6.3-1 python-pyparsing_2.2.0+dfsg1-2 python-scipy_1.1.0-2 python-setuptools_40.6.3-1 python-six_1.12.0-1 python-statsmodels_0.8.0-7 python-statsmodels-lib_0.8.0-7+b1 python-subprocess32_3.5.3-1 python-tz_2018.9-1 python2_2.7.15-4 python2-dev_2.7.15-4 python2-minimal_2.7.15-4 python2.7_2.7.15-5 python2.7-dev_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.7.2-1 python3-distutils_3.7.2-3 python3-lib2to3_3.7.2-3 python3-minimal_3.7.2-1 python3.7_3.7.2-1 python3.7-minimal_3.7.2-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-tnseq-transit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-4+rpi1 systemd-sysv_240-4+rpi1 sysvinit-utils_2.93-5 tar_1.30+dfsg-4 ttf-bitstream-vera_1.10-8 tzdata_2018i-1 udev_240-4+rpi1 util-linux_2.33.1-0.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Jan 30 15:10:50 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./tnseq-transit_2.3.4-1.dsc
dpkg-source: info: extracting tnseq-transit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking tnseq-transit_2.3.4.orig.tar.gz
dpkg-source: info: unpacking tnseq-transit_2.3.4-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying skip_test_requiring_non_existing_input_data.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-fc8e0b50-c230-4485-ba26-6e463cffc6ae
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package tnseq-transit
dpkg-buildpackage: info: source version 2.3.4-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean --with python2 --buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
if [ -e tests_invalid_data/H37Rv.fna ] ; then \
    mv tests_invalid_data/H37Rv.fna tests ; \
    rmdir tests_invalid_data ; \
fi
dh_auto_clean
I: pybuild base:217: python2.7 setup.py clean 
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules build-arch
dh build-arch --with python2 --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p tests_invalid_data
mv tests/H37Rv.fna tests_invalid_data
dh_auto_configure
I: pybuild base:217: python2.7 setup.py config 
running config
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/tpp_gui.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
copying src/pytpp/tpp_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/draw_trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/fileDisplay.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/images.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/norm_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/qcDisplay.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/stat_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/tnseq_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/transit_gui.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/transit_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
copying src/pytransit/view_trash.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/anova.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/binomial.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/example.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/gi.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/griffin.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/gumbel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/hmm.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/norm.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/normalize.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/pathway_enrichment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/rankproduct.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/resampling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/tn5gaps.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/tnseq_stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
copying src/pytransit/analysis/utest.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/combined_wig.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/igv.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
copying src/pytransit/export/mean_counts.py -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export
running egg_info
creating tnseq_transit.egg-info
writing requirements to tnseq_transit.egg-info/requires.txt
writing tnseq_transit.egg-info/PKG-INFO
writing top-level names to tnseq_transit.egg-info/top_level.txt
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/GO_associated_Rvs.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep3.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/cholesterol_glycerol_combined.dat -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data
creating /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/BCG.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/BCG.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD_mod3.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/genomes.html -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.fna -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.prot_table -> /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:217: cd /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build; python2.7 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

OK
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch --with python2 --buildsystem=pybuild
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py install --root /<<PKGBUILDDIR>>/debian/tnseq-transit 
running install
running build
running build_py
running egg_info
writing requirements to tnseq_transit.egg-info/requires.txt
writing tnseq_transit.egg-info/PKG-INFO
writing top-level names to tnseq_transit.egg-info/top_level.txt
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
running install_lib
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/__main__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/tpp_gui.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytpp/tpp_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/__main__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/draw_trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/fileDisplay.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/images.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/norm_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/qcDisplay.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/stat_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/tnseq_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/transit_gui.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/transit_tools.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/view_trash.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/anova.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/binomial.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/example.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/gi.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/griffin.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/gumbel.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/hmm.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/norm.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/normalize.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/pathway_enrichment.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/rankproduct.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/resampling.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/tn5gaps.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/tnseq_stats.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/analysis/utest.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/__init__.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/base.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/combined_wig.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/igv.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/export/mean_counts.py -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/GO_associated_Rvs.csv -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_H37Rv_rep3.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/cholesterol_glycerol_combined.dat -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/glycerol_H37Rv_merged.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/glycerol_H37Rv_rep1.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/glycerol_H37Rv_rep2.wig -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/data/samples_metadata_cg.txt -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/data
creating /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/BCG.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/BCG.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37Rv.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37Rv.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvBD.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvBD.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvBD_mod3.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvMA2.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/H37RvMA2.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/genomes.html -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/mc2_155_tamu.fna -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
copying /<<PKGBUILDDIR>>/.pybuild/cpython2_2.7/build/pytransit/genomes/mc2_155_tamu.prot_table -> /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/genomes
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/__main__.py to __main__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/tpp_gui.py to tpp_gui.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytpp/tpp_tools.py to tpp_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/__main__.py to __main__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/draw_trash.py to draw_trash.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/fileDisplay.py to fileDisplay.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/images.py to images.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/norm_tools.py to norm_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/qcDisplay.py to qcDisplay.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/stat_tools.py to stat_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/tnseq_tools.py to tnseq_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/transit_gui.py to transit_gui.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/transit_tools.py to transit_tools.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/trash.py to trash.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/view_trash.py to view_trash.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/anova.py to anova.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/base.py to base.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/binomial.py to binomial.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/example.py to example.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/gi.py to gi.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/griffin.py to griffin.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/gumbel.py to gumbel.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/hmm.py to hmm.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/norm.py to norm.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/normalize.py to normalize.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/pathway_enrichment.py to pathway_enrichment.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/rankproduct.py to rankproduct.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/resampling.py to resampling.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/tn5gaps.py to tn5gaps.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/tnseq_stats.py to tnseq_stats.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/analysis/utest.py to utest.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/base.py to base.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/combined_wig.py to combined_wig.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/igv.py to igv.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/pytransit/export/mean_counts.py to mean_counts.pyc
running install_egg_info
Copying tnseq_transit.egg-info to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/lib/python2.7/dist-packages/tnseq_transit-2.3.4.egg-info
Skipping SOURCES.txt
running install_scripts
Installing transit script to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/bin
Installing tpp script to /<<PKGBUILDDIR>>/debian/tnseq-transit/usr/bin
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
mv debian/tnseq-transit/usr/bin/tpp debian/tnseq-transit/usr/bin/transit-tpp
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 tools:113: replacing shebang in debian/tnseq-transit/usr/bin/transit
I: dh_python2 tools:113: replacing shebang in debian/tnseq-transit/usr/bin/transit-tpp
I: dh_python2 pydist:220: Cannot find package that provides matplotlib_. Please add package that provides it to Build-Depends or add "matplotlib_ python-matplotlib-" line to debian/pydist-overrides or add proper  dependency to Depends by hand and ignore this info.
I: dh_python2 pydist:220: Cannot find package that provides numpy_. Please add package that provides it to Build-Depends or add "numpy_ python-numpy-" line to debian/pydist-overrides or add proper  dependency to Depends by hand and ignore this info.
I: dh_python2 pydist:220: Cannot find package that provides pillow_. Please add package that provides it to Build-Depends or add "pillow_ python-pillow-" line to debian/pydist-overrides or add proper  dependency to Depends by hand and ignore this info.
I: dh_python2 pydist:220: Cannot find package that provides scipy_. Please add package that provides it to Build-Depends or add "scipy_ python-scipy-" line to debian/pydist-overrides or add proper  dependency to Depends by hand and ignore this info.
I: dh_python2 pydist:220: Cannot find package that provides statsmodels_. Please add package that provides it to Build-Depends or add "statsmodels_ python-statsmodels-" line to debian/pydist-overrides or add proper  dependency to Depends by hand and ignore this info.
   dh_installinit -a -O--buildsystem=pybuild
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package tnseq-transit: substitution variable ${python:Versions} unused, but is defined
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'tnseq-transit' in '../tnseq-transit_2.3.4-1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../tnseq-transit_2.3.4-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-02-05T05:24:29Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


tnseq-transit_2.3.4-1_armhf.changes:
------------------------------------

Format: 1.8
Date: Wed, 30 Jan 2019 15:54:42 +0100
Source: tnseq-transit
Binary: tnseq-transit
Architecture: armhf
Version: 2.3.4-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 tnseq-transit - statistical calculations of essentiality of genes or genomic regi
Changes:
 tnseq-transit (2.3.4-1) unstable; urgency=medium
 .
   * New upstream version
   * debhelper 12
   * Standards-Version: 4.3.0
Checksums-Sha1:
 0b7f376e1c830be6a20d20a0258239da1d2408d7 6511 tnseq-transit_2.3.4-1_armhf.buildinfo
 386181130a2e04db8b6672a5a14d10d9c7205511 6057532 tnseq-transit_2.3.4-1_armhf.deb
Checksums-Sha256:
 d311793c20361481a51ef07dbc3a02c6b1da4595d03462c52c84afc7281959fa 6511 tnseq-transit_2.3.4-1_armhf.buildinfo
 490fe9aeb673cd27bfedbf91867a76e7cd780d89030494631a86c276e77cbfef 6057532 tnseq-transit_2.3.4-1_armhf.deb
Files:
 9259ad6b662be3c0b5cad266550317b8 6511 science optional tnseq-transit_2.3.4-1_armhf.buildinfo
 063a5b54f7d1b26feff7f4f20d112370 6057532 science optional tnseq-transit_2.3.4-1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


tnseq-transit_2.3.4-1_armhf.deb
-------------------------------

 new Debian package, version 2.0.
 size 6057532 bytes: control archive=3292 bytes.
    1370 bytes,    28 lines      control              
    6954 bytes,    73 lines      md5sums              
     163 bytes,     9 lines   *  postinst             #!/bin/sh
     265 bytes,    14 lines   *  prerm                #!/bin/sh
 Package: tnseq-transit
 Version: 2.3.4-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 35976
 Depends: python-pkg-resources, python:any (<< 2.8), python:any (>= 2.7~), python-numpy, python-scipy, python-pil, python-matplotlib, python-wxgtk3.0, bwa
 Breaks: transit
 Replaces: transit
 Provides: transit
 Section: science
 Priority: optional
 Homepage: http://saclab.tamu.edu/essentiality/transit/
 Description: statistical calculations of essentiality of genes or genomic regions
  This is a software that can be used to analyze Tn-Seq datasets. It
  includes various statistical calculations of essentiality of genes or
  genomic regions (including conditional essentiality between 2
  conditions). These methods were developed and tested as a collaboration
  between the Sassetti lab (UMass) and the Ioerger lab (Texas A&M)
  .
  TRANSIT is capable of analyzing TnSeq libraries constructed with Himar1
  or Tn5 datasets.
  .
  TRANSIT assumes you have already done pre-processing of raw sequencing
  files (.fastq) and extracted read counts into a .wig formatted file.
  The .wig file should contain the counts at all sites where an insertion
  could take place (including sites with no reads). For Himar1 datasets
  this is all TA sites in the genome. For Tn5 datasets this would be all
  nucleotides in the genome.

drwxr-xr-x root/root         0 2019-01-30 14:54 ./
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/bin/
-rwxr-xr-x root/root       401 2019-01-30 14:54 ./usr/bin/transit
-rwxr-xr-x root/root       393 2019-01-30 14:54 ./usr/bin/transit-tpp
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/python2.7/
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/python2.7/dist-packages/
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/python2.7/dist-packages/pytpp/
-rw-r--r-- root/root         1 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytpp/__init__.py
-rw-r--r-- root/root      3331 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytpp/__main__.py
-rw-r--r-- root/root     20923 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytpp/tpp_gui.py
-rw-r--r-- root/root     40402 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytpp/tpp_tools.py
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/python2.7/dist-packages/pytransit/
-rw-r--r-- root/root       119 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/__init__.py
-rw-r--r-- root/root      3588 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/__main__.py
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/python2.7/dist-packages/pytransit/analysis/
-rw-r--r-- root/root      1333 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/__init__.py
-rw-r--r-- root/root      8863 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/anova.py
-rw-r--r-- root/root     16450 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/base.py
-rw-r--r-- root/root     20659 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/binomial.py
-rw-r--r-- root/root      7590 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/example.py
-rw-r--r-- root/root     36693 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/gi.py
-rw-r--r-- root/root     10026 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/griffin.py
-rw-r--r-- root/root     21198 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/gumbel.py
-rw-r--r-- root/root     22076 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/hmm.py
-rw-r--r-- root/root      3900 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/norm.py
-rw-r--r-- root/root      4811 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/normalize.py
-rw-r--r-- root/root     16322 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/pathway_enrichment.py
-rw-r--r-- root/root     13660 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/rankproduct.py
-rw-r--r-- root/root     23956 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/resampling.py
-rw-r--r-- root/root     14591 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/tn5gaps.py
-rw-r--r-- root/root      4550 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/tnseq_stats.py
-rw-r--r-- root/root     14600 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/analysis/utest.py
drwxr-xr-x root/root         0 2019-01-30 14:54 ./usr/lib/python2.7/dist-packages/pytransit/data/
-rw-r--r-- root/root    285249 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/GO_associated_Rvs.csv
-rw-r--r-- root/root     32738 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/H37Rv.sanger_associated_RVS.csv
-rw-r--r-- root/root    785384 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_merged.wig
-rw-r--r-- root/root    766014 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_rep1.wig
-rw-r--r-- root/root    762998 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_rep2.wig
-rw-r--r-- root/root    757561 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_H37Rv_rep3.wig
-rw-r--r-- root/root   3189503 2019-01-14 16:07 ./usr/lib/python2.7/dist-packages/pytransit/data/cholesterol_glycerol_combined.dat
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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 123456
Build-Time: 215
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1027
Job: tnseq-transit_2.3.4-1
Machine Architecture: armhf
Package: tnseq-transit
Package-Time: 1305
Source-Version: 2.3.4-1
Space: 123456
Status: successful
Version: 2.3.4-1
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Finished at 2019-02-05T05:24:29Z
Build needed 00:21:45, 123456k disc space