Raspbian Package Auto-Building

Build log for spaln (2.4.0+dfsg-2) on armhf

spaln2.4.0+dfsg-2armhf → 2020-01-18 06:34:03

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02

+==============================================================================+
| spaln 2.4.0+dfsg-2 (armhf)                   Sat, 18 Jan 2020 06:21:29 +0000 |
+==============================================================================+

Package: spaln
Version: 2.4.0+dfsg-2
Source Version: 2.4.0+dfsg-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-6f3279c5-8f4e-4185-9f64-7f05ad098516' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.3 MB in 27s (891 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'spaln' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/spaln.git
Please use:
git clone https://salsa.debian.org/med-team/spaln.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 15.4 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main spaln 2.4.0+dfsg-2 (dsc) [2025 B]
Get:2 http://172.17.0.1/private bullseye-staging/main spaln 2.4.0+dfsg-2 (tar) [15.4 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main spaln 2.4.0+dfsg-2 (diff) [3532 B]
Fetched 15.4 MB in 2s (9221 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/spaln-UmNHFX/spaln-2.4.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/spaln-UmNHFX' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-NB0Ixs/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-NB0Ixs/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2705 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12210 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12)
Filtered Build-Depends: debhelper-compat (= 12)
dpkg-deb: building package 'sbuild-build-depends-spaln-dummy' in '/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive/sbuild-build-depends-spaln-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-spaln-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Sources [488 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ Packages [570 B]
Fetched 2391 B in 1s (2977 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install spaln build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3
  libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0
  libicu63 libmagic-mgc libmagic1 libpipeline1 libsigsegv2
  libsub-override-perl libtinfo5 libtool libuchardet0 libxml2 m4 man-db
  po-debconf sensible-utils
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
  libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
  www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3
  libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0
  libicu63 libmagic-mgc libmagic1 libpipeline1 libsigsegv2
  libsub-override-perl libtinfo5 libtool libuchardet0 libxml2 m4 man-db
  po-debconf sbuild-build-depends-spaln-dummy sensible-utils
0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded.
Need to get 18.7 MB of archives.
After this operation, 67.7 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NB0Ixs/apt_archive ./ sbuild-build-depends-spaln-dummy 0.invalid.0 [852 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-2 [1261 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-3 [262 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-3 [112 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-3 [66.8 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-11 [547 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.7.3 [174 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-1 [104 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-1 [23.6 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-1 [14.6 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.4-1 [1138 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-8 [593 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.7.3 [1019 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 18.7 MB in 2s (9456 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12210 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../01-libtinfo5_6.1+20191019-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.1+20191019-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../02-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
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Preparing to unpack .../03-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
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Preparing to unpack .../04-groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
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Preparing to unpack .../05-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
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Preparing to unpack .../06-man-db_2.9.0-2_armhf.deb ...
Unpacking man-db (2.9.0-2) ...
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Preparing to unpack .../07-sensible-utils_0.0.12+nmu1_all.deb ...
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Preparing to unpack .../08-libmagic-mgc_1%3a5.38-3_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-3) ...
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Preparing to unpack .../09-libmagic1_1%3a5.38-3_armhf.deb ...
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Unpacking gettext-base (0.19.8.1-10) ...
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Unpacking libsigsegv2:armhf (2.12-2) ...
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Unpacking m4 (1.4.18-4) ...
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Preparing to unpack .../35-sbuild-build-depends-spaln-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-spaln-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libmagic-mgc (1:5.38-3) ...
Setting up libarchive-zip-perl (1.67-1) ...
Setting up libglib2.0-0:armhf (2.62.4-1) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (12.7.3) ...
Setting up libmagic1:armhf (1:5.38-3) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-3) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up autotools-dev (20180224.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.1+20191019-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-8) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-1) ...
Setting up libtool (2.4.6-11) ...
Setting up m4 (1.4.18-4) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11) ...
Setting up dh-strip-nondeterminism (1.6.3-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-4) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.0-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up po-debconf (1.0.21) ...
Setting up debhelper (12.7.3) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-spaln-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.33.1-6+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-22+rpi1 gcc-9_9.2.1-22+rpi1 libc6-dev_2.29-7+rpi1 libstdc++-9-dev_9.2.1-22+rpi1 libstdc++6_9.2.1-22+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-5 binutils_2.33.1-6+rpi1 binutils-arm-linux-gnueabihf_2.33.1-6+rpi1 binutils-common_2.33.1-6+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.2.1-22+rpi1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.3 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-1 diffutils_1:3.7-3 dirmngr_2.2.19-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-3 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.2.1-22+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-3+b1 gcc-8-base_8.3.0-26+rpi1 gcc-9_9.2.1-22+rpi1 gcc-9-base_9.2.1-22+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.19-1 gnupg-l10n_2.2.19-1 gnupg-utils_2.2.19-1 gpg_2.2.19-1 gpg-agent_2.2.19-1 gpg-wks-client_2.2.19-1 gpg-wks-server_2.2.19-1 gpgconf_2.2.19-1 gpgsm_2.2.19-1 gpgv_2.2.19-1 grep_3.3-1 groff-base_1.22.4-4 gzip_1.9-3 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libasan5_9.2.1-22+rpi1 libassuan0_2.5.3-7 libatomic1_9.2.1-22+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.33.1-6+rpi1 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-7+rpi1 libc-dev-bin_2.29-7+rpi1 libc6_2.29-7+rpi1 libc6-dev_2.29-7+rpi1 libcap-ng0_0.7.9-2.1 libcc1-0_9.2.1-22+rpi1 libcom-err2_1.45.5-2 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10+b5 libcrypt1_1:4.4.10-10+b5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.7.3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.3-1 libgcc-9-dev_9.2.1-22+rpi1 libgcc1_1:9.2.1-22+rpi1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.62.4-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_9.2.1-22+rpi1 libgpg-error0_1.36-7 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libisl22_0.22-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-3 libmagic1_1:5.38-3 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncursesw6_6.1+20191019-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libreadline8_8.0-3 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2+rpi1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.30.1+fossil191229-1 libss2_1.45.5-2 libstdc++-9-dev_9.2.1-22+rpi1 libstdc++6_9.2.1-22+rpi1 libsub-override-perl_0.09-2 libsystemd0_244-3+rpi1+b1 libtasn1-6_4.15.0-2 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libtinfo5_6.1+20191019-1 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libubsan1_9.2.1-22+rpi1 libuchardet0_0.0.6-3 libudev1_244-3+rpi1+b1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml2_2.9.4+dfsg1-8 libzstd1_1.4.4+dfsg-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 netbase_6.0 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-spaln-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-1 tar_1.30+dfsg-6 tzdata_2019c-3 util-linux_2.34-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sun Jan 12 19:56:47 2020 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./spaln_2.4.0+dfsg-2.dsc
dpkg-source: info: extracting spaln in /<<BUILDDIR>>/spaln-2.4.0+dfsg
dpkg-source: info: unpacking spaln_2.4.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking spaln_2.4.0+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardening.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-6f3279c5-8f4e-4185-9f64-7f05ad098516
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package spaln
dpkg-buildpackage: info: source version 2.4.0+dfsg-2
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
[ -r src/Makefile ] && make -C src clean || true
rm -f src/dbs.h src/iolib.h src/*.o src/*.a src/Makefile
make[1]: Leaving directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
   dh_clean
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/spaln.substvars debian/spaln-data.substvars debian/files
	rm -fr -- debian/spaln/ debian/tmp/ debian/spaln-data/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
 debian/rules build-arch
dh build-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
cd src && ./configure --exec_prefix=/usr/bin
Checking for 64 bits compiler...
use CXX=g++ CFLAGS=-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto
binaries install to /usr/bin
tables install to /usr/share/spaln/table
alndbs install to /usr/share/spaln/seqdb
wrote Makefile
wrote files
OK. try make and make install. good luck!
make[1]: Leaving directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
/usr/bin/make table_dir=/usr/share/spaln/table alndbs_dir=/usr/share/spaln/seqdb exec_prefix=/usr/bin -C src
make[2]: Entering directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg/src'
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c spaln.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from spaln.c:25:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
In file included from spaln.c:29:
blksrc.h:586:2: warning: extra ';' [-Wpedantic]
  586 | };
      |  ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c blksrc.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from blksrc.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
In file included from blksrc.c:25:
blksrc.h:586:2: warning: extra ';' [-Wpedantic]
  586 | };
      |  ^
blksrc.c: In function 'void idx2SeqLenStat(const char*, SeqLenStat&)':
blksrc.c:1001:19: warning: comparison of integer expressions of different signedness: 'INT' {aka 'unsigned int'} and 'long int' [-Wsign-compare]
 1001 |      if (sls.maxv < widx->seqlen) sls.maxv = widx->seqlen;
      |          ~~~~~~~~~^~~~~~~~~~~~~~
blksrc.c: In member function 'bool SrchBlk::FindHsp(BPAIR*)':
blksrc.c:2542:24: warning: comparison of integer expressions of different signedness: 'int' and 'INT' {aka 'unsigned int'} [-Wsign-compare]
 2542 |      if (curgr - gener >= OutPrm.MaxOut - 1) {
      |          ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c aln2.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from aln2.c:23:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c dbs.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from dbs.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
dbs.c: In member function 'Seq* Seq::getdbseq(DbsDt*, const char*, int, bool)':
dbs.c:821:9: warning: comparison of integer expressions of different signedness: 'INT' {aka 'unsigned int'} and 'long int' [-Wsign-compare]
  821 |   if (n > record->seqlen) n = record->seqlen;
      |       ~~^~~~~~~~~~~~~~~~
dbs.c:826:9: warning: comparison of integer expressions of different signedness: 'INT' {aka 'unsigned int'} and 'long int' [-Wsign-compare]
  826 |   if (n == record->seqlen) break;
      |       ~~^~~~~~~~~~~~~~~~~
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c gaps.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from gaps.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c codepot.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from codepot.c:26:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c divseq.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from divseq.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c gsinfo.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from gsinfo.c:23:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c fwd2b1.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from fwd2b1.c:28:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c fwd2d1.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from fwd2d1.c:29:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c fwd2h1.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from fwd2h1.c:29:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c fwd2s1.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from fwd2s1.c:26:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c bitpat.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from bitpat.c:23:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c seq.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from seq.c:23:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
seq.c: In member function 'Seq* Seq::aliaseq(Seq*, bool)':
seq.c:408:32: warning: 'void* memcpy(void*, const void*, size_t)' writing to an object of type 'class Seq' with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  408 |  memcpy(dest, this, sizeof(Seq));
      |                                ^
In file included from seq.c:23:
seq.h:252:7: note: 'class Seq' declared here
  252 | class Seq {
      |       ^~~
seq.c: In member function 'void Seq::seqalloc(int, int, bool)':
seq.c:477:26: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=]
  477 |  } catch (std::bad_alloc ba) {
      |                          ^~
seq.c: In member function 'CHAR* Seq::seq_realloc()':
seq.c:499:26: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=]
  499 |  } catch (std::bad_alloc ba) {
      |                          ^~
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c simmtx.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from simmtx.c:25:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c sqpr.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from divseq.h:26,
                 from sqpr.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c utilseq.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from utilseq.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c vmf.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from vmf.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c wln.c
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from wln.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
ar rc sblib.a aln2.o dbs.o gaps.o  codepot.o divseq.o gsinfo.o \
fwd2b1.o fwd2d1.o fwd2h1.o fwd2s1.o bitpat.o \
seq.o simmtx.o sqpr.o utilseq.o vmf.o wln.o
ranlib sblib.a
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c clib.c
In file included from clib.c:34:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c iolib.c
In file included from iolib.c:33:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c mfile.c
In file included from stdtype.h:34,
                 from mfile.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c sets.c
In file included from stdtype.h:34,
                 from sets.c:22:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -c supprime.c
In file included from stdtype.h:34,
                 from supprime.c:13:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
ar rc clib.a clib.o iolib.o mfile.o sets.o supprime.o
ranlib clib.a
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -o spaln spaln.o blksrc.o sblib.a clib.a -lpthread -lm -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -o sortgrcd sortgrcd.c sblib.a clib.a -lpthread -lm -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from aln.h:26,
                 from sortgrcd.h:26,
                 from sortgrcd.c:26:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -o makmdm makmdm.c clib.a -lpthread -lm -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from makmdm.c:28:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
makmdm.c: In function 'void exp_qdt(double (*)[20], double*, double, int)':
makmdm.c:396:15: warning: unused variable 'q' [-Wunused-variable]
  396 | static double q[2][20][20] = {
      |               ^
makmdm.c: At global scope:
makmdm.c:396:15: warning: 'q' defined but not used [-Wunused-variable]
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/spaln-2.4.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -DM_THREAD=1 -o makdbs makdbs.c sblib.a clib.a -lpthread -lm -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto
In file included from stdtype.h:34,
                 from cmn.h:25,
                 from seq.h:25,
                 from makdbs.c:23:
clib.h:957:51: warning: extra ';' [-Wpedantic]
  957 | inline double inverse(double x) {return (1. / x);};
      |                                                   ^
make[2]: Leaving directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg/src'
make[1]: Leaving directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch
   dh_testroot -a
   dh_prep -a
	rm -f -- debian/spaln.substvars
	rm -fr -- debian/.debhelper/generated/spaln/ debian/spaln/ debian/tmp/
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
/usr/bin/make table_dir=/<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/table alndbs_dir=/<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/seqdb exec_prefix=/<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln//usr/bin -C src install
make[2]: Entering directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg/src'
test -d /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln//usr/bin || mkdir -p /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln//usr/bin
cp spaln sortgrcd makmdm makdbs /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln//usr/bin
test -d /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/table || mkdir -p /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/table
./makmdm /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/table

  7.6862  5.1057  4.2546  5.1269  2.0279  4.1061  6.1820  7.4714  2.2983  5.2569
  9.1111  5.9498  2.3414  4.0530  5.0532  6.8225  5.8518  1.4336  3.2303  6.6374
Pam = 0  Norl fact = 106.899 trace = 106.899
Pam = 10  Norl fact =  13.996 trace =  41.995
Pam = 20  Norl fact =  15.588 trace =  45.299
Pam = 30  Norl fact =  16.894 trace =  47.531
Pam = 40  Norl fact =  18.094 trace =  49.266
Pam = 50  Norl fact =  19.249 trace =  50.701
Pam = 60  Norl fact =  20.386 trace =  51.928
Pam = 70  Norl fact =  21.522 trace =  52.997
Pam = 80  Norl fact =  22.667 trace =  53.943
Pam = 90  Norl fact =  23.828 trace =  54.788
Pam = 100  Norl fact =  25.012 trace =  55.547
Pam = 110  Norl fact =  26.222 trace =  56.234
Pam = 120  Norl fact =  27.462 trace =  56.858
Pam = 130  Norl fact =  28.735 trace =  57.427
Pam = 140  Norl fact =  30.044 trace =  57.946
Pam = 150  Norl fact =  31.391 trace =  58.421
Pam = 160  Norl fact =  32.778 trace =  58.858
Pam = 170  Norl fact =  34.208 trace =  59.259
Pam = 180  Norl fact =  35.683 trace =  59.629
Pam = 190  Norl fact =  37.204 trace =  59.970
Pam = 200  Norl fact =  38.774 trace =  60.286
Pam = 210  Norl fact =  40.394 trace =  60.580
Pam = 220  Norl fact =  42.066 trace =  60.854
Pam = 230  Norl fact =  43.793 trace =  61.110
Pam = 240  Norl fact =  45.577 trace =  61.350
Pam = 250  Norl fact =  47.419 trace =  61.576
Pam = 260  Norl fact =  49.322 trace =  61.791
Pam = 270  Norl fact =  51.287 trace =  61.996
Pam = 280  Norl fact =  53.318 trace =  62.191
Pam = 290  Norl fact =  55.415 trace =  62.380
Pam = 300  Norl fact =  57.582 trace =  62.563
test -d /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/seqdb || mkdir -p /<<BUILDDIR>>/spaln-2.4.0+dfsg/debian/spaln-data//usr/share/spaln/seqdb
make[2]: Leaving directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg/src'
make[1]: Leaving directory '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
   dh_install -a
	install -d debian/.debhelper/generated/spaln
	install -d debian/.debhelper/generated/spaln-data
   dh_installdocs -a
	install -d debian/spaln/usr/share/doc/spaln
	cp --reflink=auto -a ./debian/README.Debian debian/spaln/usr/share/doc/spaln
	cp --reflink=auto -a ./doc/readme.html debian/spaln/usr/share/doc/spaln
	cp --reflink=auto -a ./doc/spalnData.txt debian/spaln/usr/share/doc/spaln
	cp --reflink=auto -a ./README.md debian/spaln/usr/share/doc/spaln
	chown -R 0:0 debian/spaln/usr/share/doc
	chmod -R u\+rw,go=rX debian/spaln/usr/share/doc
	install -p -m0644 debian/README.Debian debian/spaln/usr/share/doc/spaln/README.Debian
	install -p -m0644 debian/copyright debian/spaln/usr/share/doc/spaln/copyright
   dh_installchangelogs -a
	install -p -m0644 debian/changelog debian/spaln/usr/share/doc/spaln/changelog.Debian
   dh_installman -a
	install -d debian/spaln/usr/share/man/man1/
	install -p -m0644 ./sortgrcd.1 debian/spaln/usr/share/man/man1/sortgrcd.1
	install -p -m0644 ./spaln.1 debian/spaln/usr/share/man/man1/spaln.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/spaln/usr/share/man/man1/sortgrcd.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/spaln/usr/share/man/man1/spaln.1
	mv debian/spaln/usr/share/man/man1/sortgrcd.1.dh-new debian/spaln/usr/share/man/man1/sortgrcd.1
	chmod 0644 -- debian/spaln/usr/share/man/man1/sortgrcd.1
	mv debian/spaln/usr/share/man/man1/spaln.1.dh-new debian/spaln/usr/share/man/man1/spaln.1
	chmod 0644 -- debian/spaln/usr/share/man/man1/spaln.1
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
	cd debian/spaln
	chmod a-x usr/share/doc/spaln/README.md usr/share/doc/spaln/changelog.Debian usr/share/man/man1/sortgrcd.1 usr/share/man/man1/spaln.1
	gzip -9nf usr/share/doc/spaln/README.md usr/share/doc/spaln/changelog.Debian usr/share/man/man1/sortgrcd.1 usr/share/man/man1/spaln.1
	cd '/<<BUILDDIR>>/spaln-2.4.0+dfsg'
   dh_fixperms -a
	find debian/spaln -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/spaln ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/spaln/usr/share/doc -type f -a -true -a ! -regex 'debian/spaln/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/spaln/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/spaln/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/spaln -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/spaln/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
   dh_missing -a
   dh_dwz -a
	install -d debian/spaln/usr/lib/debug/.dwz/arm-linux-gnueabihf
	dwz -mdebian/spaln/usr/lib/debug/.dwz/arm-linux-gnueabihf/spaln.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/spaln.debug -- debian/spaln/usr/bin/makdbs debian/spaln/usr/bin/makmdm debian/spaln/usr/bin/sortgrcd debian/spaln/usr/bin/spaln
	objcopy --compress-debug-sections debian/spaln/usr/lib/debug/.dwz/arm-linux-gnueabihf/spaln.debug
   dh_strip -a
	install -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/6c
	objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/makdbs debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/6c/4d698969fd55812778e68e2333e126006f19ff.debug
	chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/6c/4d698969fd55812778e68e2333e126006f19ff.debug
	chown 0:0 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/6c/4d698969fd55812778e68e2333e126006f19ff.debug
	strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/makdbs
	objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/6c/4d698969fd55812778e68e2333e126006f19ff.debug debian/spaln/usr/bin/makdbs
	install -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/c3
	objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/makmdm debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/c3/05784ecadfccf59a729dde67571f3a3be26a85.debug
	chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/c3/05784ecadfccf59a729dde67571f3a3be26a85.debug
	chown 0:0 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/c3/05784ecadfccf59a729dde67571f3a3be26a85.debug
	strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/makmdm
	objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/c3/05784ecadfccf59a729dde67571f3a3be26a85.debug debian/spaln/usr/bin/makmdm
	install -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/ea
	objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/sortgrcd debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/ea/b92245b924c9bf8ea01df161e173fcbe8f445b.debug
	chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/ea/b92245b924c9bf8ea01df161e173fcbe8f445b.debug
	chown 0:0 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/ea/b92245b924c9bf8ea01df161e173fcbe8f445b.debug
	strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/sortgrcd
	objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/ea/b92245b924c9bf8ea01df161e173fcbe8f445b.debug debian/spaln/usr/bin/sortgrcd
	install -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/af
	objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/spaln debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/af/fb928047ac712a88fd343b47c930ca5aa0ffbc.debug
	chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/af/fb928047ac712a88fd343b47c930ca5aa0ffbc.debug
	chown 0:0 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/af/fb928047ac712a88fd343b47c930ca5aa0ffbc.debug
	strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/spaln
	objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/af/fb928047ac712a88fd343b47c930ca5aa0ffbc.debug debian/spaln/usr/bin/spaln
	install -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.dwz
	cp --reflink=auto -a debian/spaln/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.dwz
	rm -fr debian/spaln/usr/lib/debug/.dwz
	rmdir -p --ignore-fail-on-non-empty debian/spaln/usr/lib/debug
	install -d debian/.debhelper/spaln/dbgsym-root/usr/share/doc
	ln -s spaln debian/.debhelper/spaln/dbgsym-root/usr/share/doc/spaln-dbgsym
   dh_makeshlibs -a
	rm -f debian/spaln/DEBIAN/shlibs
   dh_shlibdeps -a
	install -d debian/spaln/DEBIAN
	dpkg-shlibdeps -Tdebian/spaln.substvars debian/spaln/usr/bin/makdbs debian/spaln/usr/bin/makmdm debian/spaln/usr/bin/sortgrcd debian/spaln/usr/bin/spaln
dpkg-shlibdeps: warning: debian/spaln/usr/bin/spaln contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin
dpkg-shlibdeps: warning: debian/spaln/usr/bin/makdbs contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin
dpkg-shlibdeps: warning: debian/spaln/usr/bin/makmdm contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin
dpkg-shlibdeps: warning: debian/spaln/usr/bin/sortgrcd contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/spaln/usr/bin/spaln debian/spaln/usr/bin/makdbs debian/spaln/usr/bin/makmdm debian/spaln/usr/bin/sortgrcd were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
	echo misc:Depends= >> debian/spaln.substvars
	echo misc:Pre-Depends= >> debian/spaln.substvars
	install -d debian/.debhelper/spaln/dbgsym-root/DEBIAN
	dpkg-gencontrol -pspaln -ldebian/changelog -Tdebian/spaln.substvars -Pdebian/.debhelper/spaln/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=spaln-dbgsym "-DDepends=spaln (= \${binary:Version})" "-DDescription=debug symbols for spaln" "-DBuild-Ids=6c4d698969fd55812778e68e2333e126006f19ff affb928047ac712a88fd343b47c930ca5aa0ffbc c305784ecadfccf59a729dde67571f3a3be26a85 eab92245b924c9bf8ea01df161e173fcbe8f445b" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
	chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/DEBIAN/control
	chown 0:0 -- debian/.debhelper/spaln/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -pspaln -ldebian/changelog -Tdebian/spaln.substvars -Pdebian/spaln -UMulti-Arch
	chmod 0644 -- debian/spaln/DEBIAN/control
	chown 0:0 -- debian/spaln/DEBIAN/control
   dh_md5sums -a
	cd debian/spaln >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/spaln/DEBIAN/md5sums
	chown 0:0 -- debian/spaln/DEBIAN/md5sums
	cd debian/.debhelper/spaln/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/DEBIAN/md5sums
	chown 0:0 -- debian/.debhelper/spaln/dbgsym-root/DEBIAN/md5sums
   dh_builddeb -a
	dpkg-deb --build debian/spaln ..
	dpkg-deb --build debian/.debhelper/spaln/dbgsym-root ..
dpkg-deb: building package 'spaln' in '../spaln_2.4.0+dfsg-2_armhf.deb'.
dpkg-deb: building package 'spaln-dbgsym' in '../spaln-dbgsym_2.4.0+dfsg-2_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../spaln_2.4.0+dfsg-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-01-18T06:33:56Z

Finished
--------

I: Built successfully

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| Changes                                                                      |
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spaln_2.4.0+dfsg-2_armhf.changes:
---------------------------------

Format: 1.8
Date: Sun, 12 Jan 2020 20:53:13 +0100
Source: spaln
Binary: spaln spaln-dbgsym
Architecture: armhf
Version: 2.4.0+dfsg-2
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 spaln      - splicing-aware transcript-alignment to genomic DNA
Changes:
 spaln (2.4.0+dfsg-2) unstable; urgency=medium
 .
   * Team upload.
   * Source-only upload
Checksums-Sha1:
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 8771fa204f86d53b09fa3fc84844c670cce42397 4579 spaln_2.4.0+dfsg-2_armhf.buildinfo
 d47afa7476804c2bb0d791c56828e074741c76c4 270656 spaln_2.4.0+dfsg-2_armhf.deb
Checksums-Sha256:
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 ee9d70b2433f31a5f61993834c122e210f5b2951feaf0f234f5884a60709c5a3 4579 spaln_2.4.0+dfsg-2_armhf.buildinfo
 72917a22b4d4d59a00b1b8ca23abb0c66af9465ca227790f275df2f43a9cd1fa 270656 spaln_2.4.0+dfsg-2_armhf.deb
Files:
 2b7864b146b7d04b8483d203c415db22 923732 debug optional spaln-dbgsym_2.4.0+dfsg-2_armhf.deb
 332b1c4f3db9612cc1a3c6e6941b0461 4579 science optional spaln_2.4.0+dfsg-2_armhf.buildinfo
 fd20a0d79a8d1d6baa31a4d259daf5ba 270656 science optional spaln_2.4.0+dfsg-2_armhf.deb

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| Package contents                                                             |
+------------------------------------------------------------------------------+


spaln-dbgsym_2.4.0+dfsg-2_armhf.deb
-----------------------------------

 new Debian package, version 2.0.
 size 923732 bytes: control archive=748 bytes.
     496 bytes,    12 lines      control              
     509 bytes,     5 lines      md5sums              
 Package: spaln-dbgsym
 Source: spaln
 Version: 2.4.0+dfsg-2
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1029
 Depends: spaln (= 2.4.0+dfsg-2)
 Section: debug
 Priority: optional
 Description: debug symbols for spaln
 Build-Ids: 6c4d698969fd55812778e68e2333e126006f19ff affb928047ac712a88fd343b47c930ca5aa0ffbc c305784ecadfccf59a729dde67571f3a3be26a85 eab92245b924c9bf8ea01df161e173fcbe8f445b

drwxr-xr-x root/root         0 2020-01-12 19:53 ./
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.build-id/6c/
-rw-r--r-- root/root     44492 2020-01-12 19:53 ./usr/lib/debug/.build-id/6c/4d698969fd55812778e68e2333e126006f19ff.debug
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.build-id/af/
-rw-r--r-- root/root    744044 2020-01-12 19:53 ./usr/lib/debug/.build-id/af/fb928047ac712a88fd343b47c930ca5aa0ffbc.debug
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.build-id/c3/
-rw-r--r-- root/root     22384 2020-01-12 19:53 ./usr/lib/debug/.build-id/c3/05784ecadfccf59a729dde67571f3a3be26a85.debug
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.build-id/ea/
-rw-r--r-- root/root    140348 2020-01-12 19:53 ./usr/lib/debug/.build-id/ea/b92245b924c9bf8ea01df161e173fcbe8f445b.debug
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     84512 2020-01-12 19:53 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/spaln.debug
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-01-12 19:53 ./usr/share/doc/spaln-dbgsym -> spaln


spaln_2.4.0+dfsg-2_armhf.deb
----------------------------

 new Debian package, version 2.0.
 size 270656 bytes: control archive=1236 bytes.
    1110 bytes,    21 lines      control              
     735 bytes,    12 lines      md5sums              
 Package: spaln
 Version: 2.4.0+dfsg-2
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 662
 Depends: libc6 (>= 2.29), libgcc1 (>= 1:3.5), libstdc++6 (>= 5), spaln-data
 Section: science
 Priority: optional
 Homepage: http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/spaln
 Description: splicing-aware transcript-alignment to genomic DNA
  Spaln (space-efficient spliced alignment) is a stand-alone program that
  maps and aligns a set of cDNA or protein sequences onto a whole genomic
  sequence in a single job. It also performs spliced or ordinary alignment
  after rapid similarity search against a protein sequence database,
  if a genomic segment or an amino acid sequence is given as a query.
  .
  spaln supports a combination of protein sequence database and a
  given genomic segment and performs rapid similarity searches and
  (semi-)global alignments of a set of protein sequence queries against
  a protein sequence database. Spaln adopts multi-phase heuristics that
  makes it possible to perform the job on a conventional personal computer.

drwxr-xr-x root/root         0 2020-01-12 19:53 ./
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/bin/
-rwxr-xr-x root/root     23556 2020-01-12 19:53 ./usr/bin/makdbs
-rwxr-xr-x root/root     27100 2020-01-12 19:53 ./usr/bin/makmdm
-rwxr-xr-x root/root    110032 2020-01-12 19:53 ./usr/bin/sortgrcd
-rwxr-xr-x root/root    451332 2020-01-12 19:53 ./usr/bin/spaln
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/doc/spaln/
-rw-r--r-- root/root      1014 2020-01-12 19:53 ./usr/share/doc/spaln/README.Debian
-rw-r--r-- root/root      9514 2019-11-22 01:25 ./usr/share/doc/spaln/README.md.gz
-rw-r--r-- root/root       524 2020-01-12 19:53 ./usr/share/doc/spaln/changelog.Debian.gz
-rw-r--r-- root/root      1175 2020-01-12 19:53 ./usr/share/doc/spaln/copyright
-rw-r--r-- root/root     31502 2019-11-22 05:05 ./usr/share/doc/spaln/readme.html
-rw-r--r-- root/root      1509 2013-05-13 01:58 ./usr/share/doc/spaln/spalnData.txt
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/man/
drwxr-xr-x root/root         0 2020-01-12 19:53 ./usr/share/man/man1/
-rw-r--r-- root/root      1705 2020-01-12 19:53 ./usr/share/man/man1/sortgrcd.1.gz
-rw-r--r-- root/root      3575 2020-01-12 19:53 ./usr/share/man/man1/spaln.1.gz


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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 78844
Build-Time: 407
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 279
Job: spaln_2.4.0+dfsg-2
Machine Architecture: armhf
Package: spaln
Package-Time: 747
Source-Version: 2.4.0+dfsg-2
Space: 78844
Status: successful
Version: 2.4.0+dfsg-2
--------------------------------------------------------------------------------
Finished at 2020-01-18T06:33:56Z
Build needed 00:12:27, 78844k disc space