Raspbian Package Auto-Building

Build log for spades (3.7.1+dfsg-3) on armhf

spades3.7.1+dfsg-3armhf → 2016-04-28 10:49:49

sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on bm-wb-04

+==============================================================================+
| spades 3.7.1+dfsg-3 (armhf)                                28 Apr 2016 10:23 |
+==============================================================================+

Package: spades
Version: 3.7.1+dfsg-3
Source Version: 3.7.1+dfsg-3
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/spades-6VBcWU/spades-3.7.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/spades-6VBcWU' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-3384aad5-1ad6-4393-9f34-fd56dbf453ef' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8931 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.0 MB]
Fetched 19.9 MB in 22s (906 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'spades' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/spades.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/spades.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1999 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main spades 3.7.1+dfsg-3 (dsc) [2192 B]
Get:2 http://172.17.0.1/private stretch-staging/main spades 3.7.1+dfsg-3 (tar) [1979 kB]
Get:3 http://172.17.0.1/private stretch-staging/main spades 3.7.1+dfsg-3 (diff) [17.9 kB]
Fetched 1999 kB in 0s (7757 kB/s)
Download complete and in download only mode

Check architectures
-------------------


Check dependencies
------------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ Sources [214 B]
Get:5 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ Packages [525 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-ZOp1GS/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...

+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver)                         |
+------------------------------------------------------------------------------+

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 29 not upgraded.
Need to get 0 B/768 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-ZOp1GS/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [768 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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(Reading database ... 13579 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: debhelper (>= 9), cmake, python-all-dev, zlib1g-dev, libbz2-dev, libboost-dev, libbam-dev, libbamtools-dev, libjemalloc-dev, libhts-dev, python-yaml, python-joblib, asciidoctor (>= 1.5.3), bwa, lynx
Filtered Build-Depends: debhelper (>= 9), cmake, python-all-dev, zlib1g-dev, libbz2-dev, libboost-dev, libbam-dev, libbamtools-dev, libjemalloc-dev, libhts-dev, python-yaml, python-joblib, asciidoctor (>= 1.5.3), bwa, lynx
dpkg-deb: building package 'sbuild-build-depends-spades-dummy' in '/<<BUILDDIR>>/resolver-WjyCJP/apt_archive/sbuild-build-depends-spades-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ Sources [293 B]
Get:5 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ Packages [610 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-WjyCJP/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...

+------------------------------------------------------------------------------+
| Install spades build dependencies (apt-based resolver)                       |
+------------------------------------------------------------------------------+

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  asciidoctor autoconf automake autopoint autotools-dev bsdmainutils bwa
  ca-certificates cmake cmake-data debhelper dh-autoreconf
  dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian
  libarchive-zip-perl libarchive13 libbam-dev libbamtools-dev libbamtools2.4.0
  libboost-dev libboost1.58-dev libbsd0 libbz2-dev libcroco3 libcurl3
  libexpat1 libexpat1-dev libffi6 libfile-stripnondeterminism-perl
  libglib2.0-0 libgnutls30 libgssapi-krb5-2 libhogweed4 libhts-dev libhts1
  libicu55 libidn11 libjemalloc-dev libjemalloc1 libjsoncpp1 libk5crypto3
  libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1
  libnettle6 libnghttp2-14 libp11-kit0 libpipeline1 libpython-all-dev
  libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib librtmp1 libruby2.3 libsasl2-2
  libsasl2-modules-db libsigsegv2 libsqlite3-0 libssh2-1 libssl1.0.2
  libtasn1-6 libtool libunistring0 libxml2 libyaml-0-2 lynx lynx-common m4
  man-db mime-support openssl po-debconf python python-all python-all-dev
  python-dev python-joblib python-minimal python-yaml python2.7 python2.7-dev
  python2.7-minimal rake ruby ruby-did-you-mean ruby-minitest ruby-net-telnet
  ruby-power-assert ruby-test-unit ruby2.3 rubygems-integration zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation samtools codeblocks eclipse ninja-build dh-make gettext-doc
  libasprintf-dev libgettextpo-dev groff lrzip libbamtools-doc libboost-doc
  libboost1.58-doc libboost-atomic1.58-dev libboost-chrono1.58-dev
  libboost-context1.58-dev libboost-coroutine1.58-dev
  libboost-date-time1.58-dev libboost-exception1.58-dev
  libboost-filesystem1.58-dev libboost-graph1.58-dev
  libboost-graph-parallel1.58-dev libboost-iostreams1.58-dev
  libboost-locale1.58-dev libboost-log1.58-dev libboost-math1.58-dev
  libboost-mpi1.58-dev libboost-mpi-python1.58-dev
  libboost-program-options1.58-dev libboost-python1.58-dev
  libboost-random1.58-dev libboost-regex1.58-dev
  libboost-serialization1.58-dev libboost-signals1.58-dev
  libboost-system1.58-dev libboost-test1.58-dev libboost-thread1.58-dev
  libboost-timer1.58-dev libboost-wave1.58-dev libboost1.58-tools-dev
  libmpfrc++-dev libntl-dev gnutls-bin krb5-doc krb5-user libtool-doc gfortran
  | fortran95-compiler gcj-jdk less libmail-box-perl python-doc python-tk
  python2.7-doc binfmt-support ri ruby-dev bundler
Recommended packages:
  curl | wget | lynx-cur bzip2-doc libglib2.0-data shared-mime-info
  xdg-user-dirs krb5-locales libsasl2-modules libltdl-dev xml-core
  libmail-sendmail-perl python-numpy python-nose python-simplejson zip
  fonts-lato libjs-jquery
The following NEW packages will be installed:
  asciidoctor autoconf automake autopoint autotools-dev bsdmainutils bwa
  ca-certificates cmake cmake-data debhelper dh-autoreconf
  dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian
  libarchive-zip-perl libarchive13 libbam-dev libbamtools-dev libbamtools2.4.0
  libboost-dev libboost1.58-dev libbsd0 libbz2-dev libcroco3 libcurl3
  libexpat1 libexpat1-dev libffi6 libfile-stripnondeterminism-perl
  libglib2.0-0 libgnutls30 libgssapi-krb5-2 libhogweed4 libhts-dev libhts1
  libicu55 libidn11 libjemalloc-dev libjemalloc1 libjsoncpp1 libk5crypto3
  libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1
  libnettle6 libnghttp2-14 libp11-kit0 libpipeline1 libpython-all-dev
  libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib librtmp1 libruby2.3 libsasl2-2
  libsasl2-modules-db libsigsegv2 libsqlite3-0 libssh2-1 libssl1.0.2
  libtasn1-6 libtool libunistring0 libxml2 libyaml-0-2 lynx lynx-common m4
  man-db mime-support openssl po-debconf python python-all python-all-dev
  python-dev python-joblib python-minimal python-yaml python2.7 python2.7-dev
  python2.7-minimal rake ruby ruby-did-you-mean ruby-minitest ruby-net-telnet
  ruby-power-assert ruby-test-unit ruby2.3 rubygems-integration
  sbuild-build-depends-spades-dummy zlib1g-dev
0 upgraded, 103 newly installed, 0 to remove and 29 not upgraded.
Need to get 72.6 MB/72.6 MB of archives.
After this operation, 281 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-WjyCJP/apt_archive ./ sbuild-build-depends-spades-dummy 0.invalid.0 [852 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-7 [1083 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.2-1 [88.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.10 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.11-8 [381 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.11-8 [1161 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf python-minimal armhf 2.7.11-1 [40.0 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf mime-support all 3.59 [36.4 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.1.1-1 [60.4 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libsqlite3-0 armhf 3.12.1-1 [463 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2g-2 [886 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.11-8 [1818 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf python2.7 armhf 2.7.11-8 [269 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.11-1 [19.5 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf python armhf 2.7.11-1 [150 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf cmake-data all 3.5.2-1 [1131 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libnettle6 armhf 3.2-1 [202 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libarchive13 armhf 3.1.2-11+b1 [230 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-8 [11.5 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.13.2+dfsg-5 [56.6 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.13.2+dfsg-5 [110 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.13.2+dfsg-5 [259 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.13.2+dfsg-5 [130 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libidn11 armhf 1.32-3 [110 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libhogweed4 armhf 3.2-1 [126 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.2-3 [93.3 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6 armhf 4.8-1 [44.1 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.4.10-4 [714 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.26.dfsg1-15 [65.6 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.26.dfsg1-15 [96.7 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b2 [198 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.9.2-1 [65.7 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d-1+b1 [54.4 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.5.0-2.1 [121 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libcurl3 armhf 7.47.0-1 [247 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libjsoncpp1 armhf 1.7.2-1 [65.2 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf cmake armhf 3.5.2-1 [2194 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libyaml-0-2 armhf 0.1.6-3 [41.5 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libpython2.7 armhf 2.7.11-8 [907 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf openssl armhf 1.0.2g-2 [666 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf ca-certificates all 20160104 [200 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf rubygems-integration all 1.10 [4882 B]
Get:55 http://172.17.0.1/private stretch-staging/main armhf rake all 10.5.0-2 [49.4 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf ruby-did-you-mean all 1.0.0-2 [11.2 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf ruby-minitest all 5.8.4-2 [50.3 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf ruby-net-telnet all 0.1.1-2 [12.5 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf ruby-power-assert all 0.2.7-1 [7578 B]
Get:60 http://172.17.0.1/private stretch-staging/main armhf ruby-test-unit all 3.1.7-2 [69.6 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf libruby2.3 armhf 2.3.0-5 [2834 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf ruby2.3 armhf 2.3.0-5 [167 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf ruby armhf 1:2.3.0+4 [10.6 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf asciidoctor all 1.5.4-1 [163 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20150820.1 [71.7 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.7-2 [424 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf bwa armhf 0.6.2-1 [164 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.48.0-1 [2540 kB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.57-1 [95.1 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.016-1 [11.9 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.016-1 [6998 B]
Get:78 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:79 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160403 [800 kB]
Get:81 http://172.17.0.1/private stretch-staging/main armhf libbam-dev armhf 0.1.19-2 [109 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf libboost1.58-dev armhf 1.58.0+dfsg-5+b1 [6232 kB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf libboost-dev armhf 1.58.0.1+b1 [3748 B]
Get:84 http://172.17.0.1/private stretch-staging/main armhf libbz2-dev armhf 1.0.6-8 [27.8 kB]
Get:85 http://172.17.0.1/private stretch-staging/main armhf libexpat1-dev armhf 2.1.1-1 [117 kB]
Get:86 http://172.17.0.1/private stretch-staging/main armhf libhts1 armhf 1.3-2+rpi1 [207 kB]
Get:87 http://172.17.0.1/private stretch-staging/main armhf libhts-dev armhf 1.3-2+rpi1 [260 kB]
Get:88 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-dev armhf 2.7.11-8 [27.1 MB]
Get:89 http://172.17.0.1/private stretch-staging/main armhf libpython-dev armhf 2.7.11-1 [19.6 kB]
Get:90 http://172.17.0.1/private stretch-staging/main armhf libpython-all-dev armhf 2.7.11-1 [958 B]
Get:91 http://172.17.0.1/private stretch-staging/main armhf lynx-common all 2.8.9dev8-4 [1088 kB]
Get:92 http://172.17.0.1/private stretch-staging/main armhf lynx armhf 2.8.9dev8-4 [562 kB]
Get:93 http://172.17.0.1/private stretch-staging/main armhf python-all armhf 2.7.11-1 [940 B]
Get:94 http://172.17.0.1/private stretch-staging/main armhf python2.7-dev armhf 2.7.11-8 [276 kB]
Get:95 http://172.17.0.1/private stretch-staging/main armhf python-dev armhf 2.7.11-1 [1138 B]
Get:96 http://172.17.0.1/private stretch-staging/main armhf python-all-dev armhf 2.7.11-1 [962 B]
Get:97 http://172.17.0.1/private stretch-staging/main armhf python-joblib all 0.9.4-1 [81.1 kB]
Get:98 http://172.17.0.1/private stretch-staging/main armhf python-yaml armhf 3.11-3 [102 kB]
Get:99 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:100 http://172.17.0.1/private stretch-staging/main armhf libbamtools2.4.0 armhf 2.4.0+dfsg-6 [159 kB]
Get:101 http://172.17.0.1/private stretch-staging/main armhf libbamtools-dev armhf 2.4.0+dfsg-6 [212 kB]
Get:102 http://172.17.0.1/private stretch-staging/main armhf libjemalloc1 armhf 3.6.0-9 [81.4 kB]
Get:103 http://172.17.0.1/private stretch-staging/main armhf libjemalloc-dev armhf 3.6.0-9 [176 kB]
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Setting up libkrb5support0:armhf (1.13.2+dfsg-5) ...
Setting up libk5crypto3:armhf (1.13.2+dfsg-5) ...
Setting up libkrb5-3:armhf (1.13.2+dfsg-5) ...
Setting up libgssapi-krb5-2:armhf (1.13.2+dfsg-5) ...
Setting up libidn11:armhf (1.32-3) ...
Setting up libhogweed4:armhf (3.2-1) ...
Setting up libp11-kit0:armhf (0.23.2-3) ...
Setting up libtasn1-6:armhf (4.8-1) ...
Setting up libgnutls30:armhf (3.4.10-4) ...
Setting up libsasl2-modules-db:armhf (2.1.26.dfsg1-15) ...
Setting up libsasl2-2:armhf (2.1.26.dfsg1-15) ...
Setting up libldap-2.4-2:armhf (2.4.42+dfsg-2+rpi1+b2) ...
Setting up libnghttp2-14:armhf (1.9.2-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d-1+b1) ...
Setting up libssh2-1:armhf (1.5.0-2.1) ...
Setting up libcurl3:armhf (7.47.0-1) ...
Setting up libjsoncpp1:armhf (1.7.2-1) ...
Setting up cmake (3.5.2-1) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libyaml-0-2:armhf (0.1.6-3) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.7-2) ...
Setting up libpython2.7:armhf (2.7.11-8) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up m4 (1.4.17-5) ...
Setting up openssl (1.0.2g-2) ...
Setting up ca-certificates (20160104) ...
Setting up rubygems-integration (1.10) ...
Setting up ruby-did-you-mean (1.0.0-2) ...
Setting up ruby-minitest (5.8.4-2) ...
Setting up ruby-net-telnet (0.1.1-2) ...
Setting up ruby-power-assert (0.2.7-1) ...
Setting up ruby-test-unit (3.1.7-2) ...
Setting up autoconf (2.69-10) ...
Setting up autotools-dev (20150820.1) ...
Setting up automake (1:1.15-4) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up autopoint (0.19.7-2) ...
Setting up bwa (0.6.2-1) ...
Setting up libglib2.0-0:armhf (2.48.0-1) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up gettext (0.19.7-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.19) ...
Setting up libarchive-zip-perl (1.57-1) ...
Setting up libfile-stripnondeterminism-perl (0.016-1) ...
Setting up libtool (2.4.6-0.1) ...
Setting up libbam-dev (0.1.19-2) ...
Setting up libboost1.58-dev:armhf (1.58.0+dfsg-5+b1) ...
Setting up libboost-dev:armhf (1.58.0.1+b1) ...
Setting up libbz2-dev:armhf (1.0.6-8) ...
Setting up libexpat1-dev:armhf (2.1.1-1) ...
Setting up libhts1:armhf (1.3-2+rpi1) ...
Setting up libhts-dev:armhf (1.3-2+rpi1) ...
Setting up libpython2.7-dev:armhf (2.7.11-8) ...
Setting up libpython-dev:armhf (2.7.11-1) ...
Setting up libpython-all-dev:armhf (2.7.11-1) ...
Setting up lynx-common (2.8.9dev8-4) ...
Setting up lynx (2.8.9dev8-4) ...
update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode
Setting up python-all (2.7.11-1) ...
Setting up python2.7-dev (2.7.11-8) ...
Setting up python-dev (2.7.11-1) ...
Setting up python-all-dev (2.7.11-1) ...
Setting up python-joblib (0.9.4-1) ...
Setting up python-yaml (3.11-3) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up libbamtools2.4.0 (2.4.0+dfsg-6) ...
Setting up libbamtools-dev (2.4.0+dfsg-6) ...
Setting up libjemalloc1 (3.6.0-9) ...
Setting up libjemalloc-dev (3.6.0-9) ...
Setting up rake (10.5.0-2) ...
Setting up libruby2.3:armhf (2.3.0-5) ...
Setting up dh-autoreconf (12) ...
Setting up ruby2.3 (2.3.0-5) ...
Setting up ruby (1:2.3.0+4) ...
Setting up asciidoctor (1.5.4-1) ...
Setting up debhelper (9.20160403) ...
Setting up sbuild-build-depends-spades-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (0.016-1) ...
Processing triggers for libc-bin (2.22-5) ...
Processing triggers for ca-certificates (20160104) ...
Updating certificates in /etc/ssl/certs...
173 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26-8 dpkg-dev_1.18.4 g++-5_5.3.1-14 gcc-5_5.3.1-14 libc6-dev_2.22-5 libstdc++-4.9-dev_4.9.3-12 libstdc++-5-dev_5.3.1-14 libstdc++6_5.3.1-14 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-3 adduser_3.114 apt_1.2.10 asciidoctor_1.5.4-1 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.7-2 autotools-dev_20150820.1 base-files_9.6+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.26-8 bsdmainutils_9.0.10 bsdutils_1:2.27.1-6 build-essential_11.7 bwa_0.6.2-1 bzip2_1.0.6-8 ca-certificates_20160104 cmake_3.5.2-1 cmake-data_3.5.2-1 coreutils_8.25-2 cpio_2.11+dfsg-5 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-14 dash_0.5.8-2.2 debconf_1.5.59 debfoster_2.7-2 debhelper_9.20160403 debianutils_4.7 dh-autoreconf_12 dh-strip-nondeterminism_0.016-1 diffutils_1:3.3-3 dmsetup_2:1.02.120-1 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.43~WIP.2016.03.15-2 e2fsprogs_1.43~WIP.2016.03.15-2 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.6.0+git+20160126-2 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-14 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-12 gcc-5_5.3.1-14 gcc-5-base_5.3.1-14 gettext_0.19.7-2 gettext-base_0.19.7-2 gnupg_1.4.20-5 gpgv_1.4.20-5 grep_2.22-1 groff-base_1.22.3-7 gzip_1.6-5 hostname_3.17 init_1.29 init-system-helpers_1.29 initscripts_2.88dsf-59.3 insserv_1.14.0-5.3 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-8+rpi1 kmod_22-1.1 libacl1_2.2.52-3 libapparmor1_2.10-4 libapt-pkg4.12_1.0.9.10 libapt-pkg5.0_1.2.10 libarchive-zip-perl_1.57-1 libarchive13_3.1.2-11+b1 libasan1_4.9.3-12 libasan2_5.3.1-14 libatomic1_5.3.1-14 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libbam-dev_0.1.19-2 libbamtools-dev_2.4.0+dfsg-6 libbamtools2.4.0_2.4.0+dfsg-6 libblkid1_2.27.1-6 libboost-dev_1.58.0.1+b1 libboost1.58-dev_1.58.0+dfsg-5+b1 libbsd0_0.8.2-1 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.22-5 libc-dev-bin_2.22-5 libc6_2.22-5 libc6-dev_2.22-5 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-14 libcomerr2_1.43~WIP.2016.03.15-2 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libcurl3_7.47.0-1 libdb5.3_5.3.28-11 libdbus-1-3_1.10.8-1 libdebconfclient0_0.208 libdevmapper1.02.1_2:1.02.120-1 libdpkg-perl_1.18.4 libdrm2_2.4.67-1 libexpat1_2.1.1-1 libexpat1-dev_2.1.1-1 libfakeroot_1.20.2-1 libfdisk1_2.27.1-6 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.016-1 libgc1c2_1:7.4.2-7.4 libgcc-4.9-dev_4.9.3-12 libgcc-5-dev_5.3.1-14 libgcc1_1:5.3.1-14 libgcrypt20_1.6.5-2 libgdbm3_1.8.3-13.1 libglib2.0-0_2.48.0-1 libgmp10_2:6.1.0+dfsg-2 libgnutls30_3.4.10-4 libgomp1_5.3.1-14 libgpg-error0_1.21-2 libgssapi-krb5-2_1.13.2+dfsg-5 libhogweed4_3.2-1 libhts-dev_1.3-2+rpi1 libhts1_1.3-2+rpi1 libicu55_55.1-7 libidn11_1.32-3 libisl15_0.16.1-1 libjemalloc-dev_3.6.0-9 libjemalloc1_3.6.0-9 libjsoncpp1_1.7.2-1 libk5crypto3_1.13.2+dfsg-5 libkeyutils1_1.5.9-8 libklibc_2.0.4-8+rpi1 libkmod2_22-1.1 libkrb5-3_1.13.2+dfsg-5 libkrb5support0_1.13.2+dfsg-5 libldap-2.4-2_2.4.42+dfsg-2+rpi1+b2 liblz4-1_0.0~r131-2 liblzma5_5.1.1alpha+20120614-2.1 liblzo2-2_2.08-1.2 libmagic1_1:5.25-2 libmount1_2.27.1-6 libmpc3_1.0.3-1 libmpfr4_3.1.4-1 libncurses5_6.0+20160319-1 libncursesw5_6.0+20160319-1 libnettle6_3.2-1 libnghttp2-14_1.9.2-1 libp11-kit0_0.23.2-3 libpam-modules_1.1.8-3.2 libpam-modules-bin_1.1.8-3.2 libpam-runtime_1.1.8-3.2 libpam0g_1.1.8-3.2 libpcre3_2:8.38-3.1 libperl5.22_5.22.1-9 libpipeline1_1.4.1-2 libpng12-0_1.2.54-6 libprocps3_2:3.3.9-9 libprocps5_2:3.3.11-3 libpython-all-dev_2.7.11-1 libpython-dev_2.7.11-1 libpython-stdlib_2.7.11-1 libpython2.7_2.7.11-8 libpython2.7-dev_2.7.11-8 libpython2.7-minimal_2.7.11-8 libpython2.7-stdlib_2.7.11-8 libreadline6_6.3-8+b3 librtmp1_2.4+20151223.gitfa8646d-1+b1 libruby2.3_2.3.0-5 libsasl2-2_2.1.26.dfsg1-15 libsasl2-modules-db_2.1.26.dfsg1-15 libseccomp2_2.3.0-1 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libsigsegv2_2.10-5 libslang2_2.3.0-2.3 libsmartcols1_2.27.1-6 libsqlite3-0_3.12.1-1 libss2_1.43~WIP.2016.03.15-2 libssh2-1_1.5.0-2.1 libssl1.0.2_1.0.2g-2 libstdc++-4.9-dev_4.9.3-12 libstdc++-5-dev_5.3.1-14 libstdc++6_5.3.1-14 libsystemd0_229-4 libtasn1-6_4.8-1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160319-1 libtool_2.4.6-0.1 libubsan0_5.3.1-14 libudev1_229-4 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-6 libxml2_2.9.3+dfsg1-1 libyaml-0-2_0.1.6-3 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_9.20160110+rpi1 lynx_2.8.9dev8-4 lynx-common_2.8.9dev8-4 m4_1.4.17-5 make_4.1-9 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.05-1 mawk_1.3.3-17 mime-support_3.59 mount_2.27.1-6 multiarch-support_2.22-5 nano_2.5.3-2 ncurses-base_6.0+20160319-1 ncurses-bin_6.0+20160319-1 openssl_1.0.2g-2 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-9 perl-base_5.22.1-9 perl-modules-5.22_5.22.1-9 po-debconf_1.0.19 procps_2:3.3.11-3 python_2.7.11-1 python-all_2.7.11-1 python-all-dev_2.7.11-1 python-dev_2.7.11-1 python-joblib_0.9.4-1 python-minimal_2.7.11-1 python-yaml_3.11-3 python2.7_2.7.11-8 python2.7-dev_2.7.11-8 python2.7-minimal_2.7.11-8 rake_10.5.0-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 ruby_1:2.3.0+4 ruby-did-you-mean_1.0.0-2 ruby-minitest_5.8.4-2 ruby-net-telnet_0.1.1-2 ruby-power-assert_0.2.7-1 ruby-test-unit_3.1.7-2 ruby2.3_2.3.0-5 rubygems-integration_1.10 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-spades-dummy_0.invalid.0 sed_4.2.2-7.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_229-4 systemd-sysv_229-4 sysv-rc_2.88dsf-59.3 sysvinit-utils_2.88dsf-59.3 tar_1.28-2.1 tzdata_2016c-0+deb8u1 udev_229-4 util-linux_2.27.1-6 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu Apr 21 23:44:16 2016 UTC using RSA key ID F09F4872
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./spades_3.7.1+dfsg-3.dsc
dpkg-source: info: extracting spades in spades-3.7.1+dfsg
dpkg-source: info: unpacking spades_3.7.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking spades_3.7.1+dfsg-3.debian.tar.xz
dpkg-source: info: applying 0002_use_debian_packaged_python-joblib.patch
dpkg-source: info: applying 0003_accept-system-bwa.patch
dpkg-source: info: applying 0101_cmake_ignore_removed_python-yaml.patch
dpkg-source: info: applying 0102_cmake_ignore_removed_python-joblib.patch
dpkg-source: info: applying 0103_use-debian-packaged-bwa.patch
dpkg-source: info: applying 0110_build_single_thread.patch
dpkg-source: info: applying 0111_use_full_config_dirs.patch
dpkg-source: info: applying 0112_spelling.patch
dpkg-source: info: applying 0113_adjust_paths.patch
dpkg-source: info: applying 0114_use_debian_provided_libs.patch
dpkg-source: info: applying 0115_enable_compiler_messages.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-3384aad5-1ad6-4393-9f34-fd56dbf453ef
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: source package spades
dpkg-buildpackage: source version 3.7.1+dfsg-3
dpkg-buildpackage: source distribution unstable
 dpkg-source --before-build spades-3.7.1+dfsg
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean  --with python2 --sourcedirectory=src --buildsystem=cmake
   dh_testdir -O--sourcedirectory=src -O--buildsystem=cmake
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
dh_auto_clean
rm -rf build_spades
rm -rf install_spades
rm -rf spades_test
find . -name "*.pyc" -delete
rm -rf /<<BUILDDIR>>/spades-3.7.1+dfsg/debian/man_src/*.html /<<BUILDDIR>>/spades-3.7.1+dfsg/debian/man_src/*.?
rm -rf /<<BUILDDIR>>/spades-3.7.1+dfsg/debian/man
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
   debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
dh_clean -X.orig
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
 debian/rules build-arch
dh build-arch  --with python2 --sourcedirectory=src --buildsystem=cmake
   dh_testdir -a -O--sourcedirectory=src -O--buildsystem=cmake
   dh_update_autotools_config -a -O--sourcedirectory=src -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
echo "Simply use spades_compile.sh in auto_build"
Simply use spades_compile.sh in auto_build
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
PREFIX=/<<BUILDDIR>>/spades-3.7.1+dfsg/install_spades ./spades_compile.sh
-- The C compiler identification is GNU 5.3.1
-- The CXX compiler identification is GNU 5.3.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Setting default build configuration: RelWithAsserts
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp  
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.8") 
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.6") 
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Could NOT find readline (missing:  READLINE_INCLUDE_DIR READLINE_LIBRARY) 
-- Boost version: 1.58.0
Making Release Configuration...
Building SPAdes from N/A, sha: N/A
-- Looking for open
-- Looking for open - found
-- Configuring done
-- Generating done
-- Build files have been written to: /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades
make[2]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
/usr/bin/cmake -H/<<BUILDDIR>>/spades-3.7.1+dfsg/src -B/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/CMakeFiles /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
make -f ext/nlopt/CMakeFiles/nlopt.dir/build.make ext/nlopt/CMakeFiles/nlopt.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.7.1+dfsg/src /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt/CMakeFiles/nlopt.dir/DependInfo.cmake --color=
Dependee "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt/CMakeFiles/nlopt.dir/DependInfo.cmake" is newer than depender "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt/CMakeFiles/nlopt.dir/depend.internal".
Dependee "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt/CMakeFiles/nlopt.dir/depend.internal".
Scanning dependencies of target nlopt
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
make -f ext/nlopt/CMakeFiles/nlopt.dir/build.make ext/nlopt/CMakeFiles/nlopt.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
[  1%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/api/general.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/api/general.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/general.c
[  1%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/api/optimize.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/api/optimize.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/optimize.c
[  2%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/api/options.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/api/options.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/options.c
[  2%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/api/deprecated.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/api/deprecated.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c: In function 'nlopt_minimize_constrained':
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c:149:6: warning: 'nlopt_minimize_econstrained' is deprecated [-Wdeprecated-declarations]
      return nlopt_minimize_econstrained(
      ^
In file included from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c:23:0:
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt.h:350:28: note: declared here
 NLOPT_EXTERN(nlopt_result) nlopt_minimize_econstrained(
                            ^
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c: In function 'nlopt_minimize':
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c:167:6: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations]
      return nlopt_minimize_constrained(
      ^
In file included from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/api/deprecated.c:23:0:
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt.h:339:28: note: declared here
 NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
                            ^
[  3%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/auglag/auglag.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/auglag/auglag.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/auglag/auglag.c
[  3%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/bobyqa/bobyqa.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/bobyqa/bobyqa.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/bobyqa/bobyqa.c
[  4%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/cdirect/cdirect.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/cdirect/cdirect.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/cdirect/cdirect.c
[  4%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/cdirect/hybrid.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/cdirect/hybrid.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/cdirect/hybrid.c
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/cdirect/hybrid.c: In function 'optimize_rect':
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/cdirect/hybrid.c:91:6: warning: 'nlopt_minimize' is deprecated [-Wdeprecated-declarations]
      ret = nlopt_minimize(p->local_alg, n, fcount, p, 
      ^
In file included from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt-util.h:29:0,
                 from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/cdirect/hybrid.c:27:
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt.h:329:28: note: declared here
 NLOPT_EXTERN(nlopt_result) nlopt_minimize(
                            ^
[  5%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/cobyla/cobyla.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/cobyla/cobyla.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/cobyla/cobyla.c
[  5%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/crs/crs.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/crs/crs.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/crs/crs.c
[  6%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/esch/esch.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/esch/esch.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/esch/esch.c
[  6%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/isres/isres.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/isres/isres.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/isres/isres.c
[  7%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/mma/mma.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/mma/mma.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/mma/mma.c
[  7%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/mma/ccsa_quadratic.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/mma/ccsa_quadratic.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/mma/ccsa_quadratic.c
[  8%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/mlsl/mlsl.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/mlsl/mlsl.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/mlsl/mlsl.c
[  8%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/neldermead/nldrmd.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/neldermead/nldrmd.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/neldermead/nldrmd.c
[  9%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/neldermead/sbplx.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/neldermead/sbplx.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/neldermead/sbplx.c
[  9%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/newuoa/newuoa.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/newuoa/newuoa.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c: In function 'trsapp_':
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c:184:3: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations]
   ret = nlopt_minimize_constrained(NLOPT_LD_MMA, *n, quad_model, &qmd,
   ^
In file included from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt-util.h:29:0,
                 from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/newuoa.h:4,
                 from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c:33:
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt.h:339:28: note: declared here
 NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
                            ^
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c: In function 'biglag_':
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c:1241:3: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations]
   return nlopt_minimize_constrained(NLOPT_LD_MMA, *n, lag, &ld,
   ^
In file included from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt-util.h:29:0,
                 from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/newuoa.h:4,
                 from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/newuoa/newuoa.c:33:
/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/include/nlopt/nlopt.h:339:28: note: declared here
 NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
                            ^
[ 10%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/praxis/praxis.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/praxis/praxis.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/praxis/praxis.c
[ 10%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/redblack.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/redblack.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/redblack.c
[ 11%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/rescale.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/rescale.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/rescale.c
[ 11%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/stop.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/stop.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/stop.c
[ 12%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/timer.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/timer.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/timer.c
[ 12%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/qsort_r.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/qsort_r.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/qsort_r.c
[ 13%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/sobolseq.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/sobolseq.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/sobolseq.c
[ 13%] Building C object ext/nlopt/CMakeFiles/nlopt.dir/util/mt19937ar.c.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cc  -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/nlopt.dir/util/mt19937ar.c.o   -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/nlopt/util/mt19937ar.c
[ 14%] Linking C static library libnlopt.a
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cmake -P CMakeFiles/nlopt.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/nlopt && /usr/bin/cmake -E cmake_link_script CMakeFiles/nlopt.dir/link.txt --verbose=1
/usr/bin/ar qc libnlopt.a  CMakeFiles/nlopt.dir/api/general.c.o CMakeFiles/nlopt.dir/api/optimize.c.o CMakeFiles/nlopt.dir/api/options.c.o CMakeFiles/nlopt.dir/api/deprecated.c.o CMakeFiles/nlopt.dir/auglag/auglag.c.o CMakeFiles/nlopt.dir/bobyqa/bobyqa.c.o CMakeFiles/nlopt.dir/cdirect/cdirect.c.o CMakeFiles/nlopt.dir/cdirect/hybrid.c.o CMakeFiles/nlopt.dir/cobyla/cobyla.c.o CMakeFiles/nlopt.dir/crs/crs.c.o CMakeFiles/nlopt.dir/esch/esch.c.o CMakeFiles/nlopt.dir/isres/isres.c.o CMakeFiles/nlopt.dir/mma/mma.c.o CMakeFiles/nlopt.dir/mma/ccsa_quadratic.c.o CMakeFiles/nlopt.dir/mlsl/mlsl.c.o CMakeFiles/nlopt.dir/neldermead/nldrmd.c.o CMakeFiles/nlopt.dir/neldermead/sbplx.c.o CMakeFiles/nlopt.dir/newuoa/newuoa.c.o CMakeFiles/nlopt.dir/praxis/praxis.c.o CMakeFiles/nlopt.dir/util/redblack.c.o CMakeFiles/nlopt.dir/util/rescale.c.o CMakeFiles/nlopt.dir/util/stop.c.o CMakeFiles/nlopt.dir/util/timer.c.o CMakeFiles/nlopt.dir/util/qsort_r.c.o CMakeFiles/nlopt.dir/util/sobolseq.c.o CMakeFiles/nlopt.dir/util/mt19937ar.c.o
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make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
[ 14%] Built target nlopt
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make[4]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.7.1+dfsg/src /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/DependInfo.cmake --color=
Dependee "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/DependInfo.cmake" is newer than depender "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/depend.internal".
Dependee "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/depend.internal".
Scanning dependencies of target yaml-cpp
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make -f ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/build.make ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
[ 14%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/parse.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/parse.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/parse.cpp
[ 15%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/scantag.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/scantag.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/scantag.cpp
[ 15%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/scanscalar.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/scanscalar.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/scanscalar.cpp
[ 16%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/tag.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/tag.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/tag.cpp
[ 16%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/singledocparser.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/singledocparser.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/singledocparser.cpp
[ 17%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/nodebuilder.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/nodebuilder.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/nodebuilder.cpp
[ 17%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/nodeevents.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/nodeevents.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/nodeevents.cpp
[ 18%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/emitfromevents.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/emitfromevents.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/emitfromevents.cpp
[ 18%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/regex.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/regex.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/regex.cpp
[ 19%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/emit.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/emit.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/emit.cpp
[ 19%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/memory.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/memory.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/memory.cpp
[ 20%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/simplekey.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/simplekey.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/simplekey.cpp
[ 20%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/directives.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/directives.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/directives.cpp
[ 21%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/emitterstate.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/emitterstate.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/emitterstate.cpp
[ 21%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/emitter.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/emitter.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/emitter.cpp
[ 22%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/exp.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/exp.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/exp.cpp
[ 22%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/binary.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/binary.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/binary.cpp
[ 23%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/scanner.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/scanner.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/scanner.cpp
[ 23%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/parser.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/parser.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/parser.cpp
[ 24%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/node.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/node.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/node.cpp
[ 24%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/node_data.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/node_data.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/node_data.cpp
[ 25%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/scantoken.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/scantoken.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/scantoken.cpp
[ 25%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/stream.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/stream.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/stream.cpp
[ 26%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/ostream_wrapper.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/ostream_wrapper.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/ostream_wrapper.cpp
[ 26%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/null.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/null.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/null.cpp
[ 27%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/convert.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/convert.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/convert.cpp
[ 27%] Building CXX object ext/yaml-cpp/CMakeFiles/yaml-cpp.dir/emitterutils.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/yaml-cpp.dir/emitterutils.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/yaml-cpp/emitterutils.cpp
[ 28%] Linking CXX static library libyaml-cpp.a
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/cmake -P CMakeFiles/yaml-cpp.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/yaml-cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/yaml-cpp.dir/link.txt --verbose=1
/usr/bin/ar qc libyaml-cpp.a  CMakeFiles/yaml-cpp.dir/parse.cpp.o CMakeFiles/yaml-cpp.dir/scantag.cpp.o CMakeFiles/yaml-cpp.dir/scanscalar.cpp.o CMakeFiles/yaml-cpp.dir/tag.cpp.o CMakeFiles/yaml-cpp.dir/singledocparser.cpp.o CMakeFiles/yaml-cpp.dir/nodebuilder.cpp.o CMakeFiles/yaml-cpp.dir/nodeevents.cpp.o CMakeFiles/yaml-cpp.dir/emitfromevents.cpp.o CMakeFiles/yaml-cpp.dir/regex.cpp.o CMakeFiles/yaml-cpp.dir/emit.cpp.o CMakeFiles/yaml-cpp.dir/memory.cpp.o CMakeFiles/yaml-cpp.dir/simplekey.cpp.o CMakeFiles/yaml-cpp.dir/directives.cpp.o CMakeFiles/yaml-cpp.dir/emitterstate.cpp.o CMakeFiles/yaml-cpp.dir/emitter.cpp.o CMakeFiles/yaml-cpp.dir/exp.cpp.o CMakeFiles/yaml-cpp.dir/binary.cpp.o CMakeFiles/yaml-cpp.dir/scanner.cpp.o CMakeFiles/yaml-cpp.dir/parser.cpp.o CMakeFiles/yaml-cpp.dir/node.cpp.o CMakeFiles/yaml-cpp.dir/node_data.cpp.o CMakeFiles/yaml-cpp.dir/scantoken.cpp.o CMakeFiles/yaml-cpp.dir/stream.cpp.o CMakeFiles/yaml-cpp.dir/ostream_wrapper.cpp.o CMakeFiles/yaml-cpp.dir/null.cpp.o CMakeFiles/yaml-cpp.dir/convert.cpp.o CMakeFiles/yaml-cpp.dir/emitterutils.cpp.o
/usr/bin/ranlib libyaml-cpp.a
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
[ 28%] Built target yaml-cpp
make -f ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build.make ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.7.1+dfsg/src /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/DependInfo.cmake --color=
Dependee "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/DependInfo.cmake" is newer than depender "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/depend.internal".
Dependee "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/depend.internal".
Scanning dependencies of target ConsensusCore
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
make -f ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build.make ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
[ 28%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/AffineAlignment.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/AffineAlignment.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/AffineAlignment.cpp
[ 29%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Coverage.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Coverage.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Coverage.cpp
[ 29%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Feature.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Feature.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Feature.cpp
[ 30%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Features.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Features.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Features.cpp
[ 30%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Mutation.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Mutation.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Mutation.cpp
[ 31%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/PairwiseAlignment.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/PairwiseAlignment.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/PairwiseAlignment.cpp
[ 31%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Sequence.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Sequence.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Sequence.cpp
[ 32%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Utils.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Utils.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Utils.cpp
[ 32%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Version.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Version.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Version.cpp
[ 33%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o
cd /<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore && /usr/bin/c++   -DJEMALLOC_NO_DEMANGLE -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/ext/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades/include -isystem /<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include -I/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore  -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -fopenmp -std=c++11   -UNDEBUG -Wno-deprecated -g0 -O2 -o CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o -c /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Matrix/DenseMatrix.cpp
In file included from /<<BUILDDIR>>/spades-3.7.1+dfsg/ext/src/ConsensusCore/Matrix/DenseMatrix.cpp:39:0:
/<<BUILDDIR>>/spades-3.7.1+dfsg/src/../ext/include/ConsensusCore/Matrix/DenseMatrix.hpp:40:23: fatal error: xmmintrin.h: No such file or directory
compilation terminated.
ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build.make:278: recipe for target 'ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o' failed
make[4]: *** [ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o] Error 1
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
CMakeFiles/Makefile2:266: recipe for target 'ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/all' failed
make[3]: *** [ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/all] Error 2
make[3]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
Makefile:149: recipe for target 'all' failed
make[2]: *** [all] Error 2
make[2]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg/build_spades'
debian/rules:40: recipe for target 'override_dh_auto_build' failed
make[1]: *** [override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.7.1+dfsg'
debian/rules:22: recipe for target 'build-arch' failed
make: *** [build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
--------------------------------------------------------------------------------
Build finished at 20160428-1043

Finished
--------

E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 16280
Build-Time: 551
Distribution: stretch-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 603
Job: spades_3.7.1+dfsg-3
Machine Architecture: armhf
Package: spades
Package-Time: 1197
Source-Version: 3.7.1+dfsg-3
Space: 16280
Status: attempted
Version: 3.7.1+dfsg-3
--------------------------------------------------------------------------------
Finished at 20160428-1043
Build needed 00:19:57, 16280k disc space