spades →
3.13.1+dfsg-2 →
armhf → 2020-12-12 01:43:56
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| spades 3.13.1+dfsg-2 (armhf) Sat, 12 Dec 2020 01:34:39 +0000 |
+==============================================================================+
Package: spades
Version: 3.13.1+dfsg-2
Source Version: 3.13.1+dfsg-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-ea19c41e-93f1-4b87-ab15-f11102473905' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.0 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 24.9 MB in 9s (2780 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'spades' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/spades.git
Please use:
git clone https://salsa.debian.org/med-team/spades.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3230 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main spades 3.13.1+dfsg-2 (dsc) [2381 B]
Get:2 http://172.17.0.1/private bullseye-staging/main spades 3.13.1+dfsg-2 (tar) [3203 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main spades 3.13.1+dfsg-2 (diff) [25.2 kB]
Fetched 3230 kB in 1s (5384 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/spades-hgp6mS/spades-3.13.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/spades-hgp6mS' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-TErmtz/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-TErmtz/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-TErmtz/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (9465 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 3 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (66.3 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12612 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-python, cmake, python3-dev, zlib1g-dev, libbz2-dev, libboost-dev, libbam-dev, libbamtools-dev, libhat-trie-dev, libhts-dev, libnlopt-dev, libnlopt-cxx-dev, libssw-dev, python3-yaml, python3-joblib, asciidoctor (>= 1.5.3), bwa, libbwa-dev, lynx
Filtered Build-Depends: debhelper-compat (= 12), dh-python, cmake, python3-dev, zlib1g-dev, libbz2-dev, libboost-dev, libbam-dev, libbamtools-dev, libhat-trie-dev, libhts-dev, libnlopt-dev, libnlopt-cxx-dev, libssw-dev, python3-yaml, python3-joblib, asciidoctor (>= 1.5.3), bwa, libbwa-dev, lynx
dpkg-deb: building package 'sbuild-build-depends-spades-dummy' in '/<<BUILDDIR>>/resolver-TErmtz/apt_archive/sbuild-build-depends-spades-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-spades-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Sources [601 B]
Get:5 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ Packages [682 B]
Fetched 2616 B in 0s (11.6 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install spades build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
asciidoctor autoconf automake autopoint autotools-dev bwa ca-certificates
cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism
dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl
libarchive13 libbam-dev libbamtools-dev libbamtools2.5.1 libboost-dev
libboost1.71-dev libbrotli1 libbsd0 libbwa-dev libbz2-dev libcroco3
libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdebhelper-perl
libdeflate-dev libdeflate0 libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2
libhat-trie-dev libhat-trie0 libhts-dev libhts3 libicu67 libidn11
libjsoncpp24 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzma-dev
libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libnlopt-cxx-dev
libnlopt-cxx0 libnlopt-dev libnlopt0 libnsl2 libpipeline1 libprocps8 libpsl5
libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dev
libpython3.9-minimal libpython3.9-stdlib librhash0 librtmp1 libruby2.7
libsigsegv2 libssh2-1 libssl1.1 libssw-dev libssw0 libsub-override-perl
libtirpc-common libtirpc3 libtool libuchardet0 libuv1 libxml2 libyaml-0-2
lynx lynx-common m4 mailcap man-db media-types mime-support openssl
po-debconf procps python3 python3-dev python3-distutils python3-joblib
python3-lib2to3 python3-minimal python3-pkg-resources python3-yaml python3.9
python3.9-dev python3.9-minimal rake ruby ruby-asciidoctor ruby-minitest
ruby-net-telnet ruby-power-assert ruby-rubygems ruby-test-unit ruby-xmlrpc
ruby2.7 rubygems-integration zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc samtools cmake-doc ninja-build
dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip
libbamtools-doc libboost-doc libboost1.71-doc libboost-atomic1.71-dev
libboost-chrono1.71-dev libboost-container1.71-dev libboost-context1.71-dev
libboost-contract1.71-dev libboost-coroutine1.71-dev
libboost-date-time1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev
libboost-filesystem1.71-dev libboost-graph1.71-dev
libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev
libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev
libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev
libboost-program-options1.71-dev libboost-python1.71-dev
libboost-random1.71-dev libboost-regex1.71-dev
libboost-serialization1.71-dev libboost-stacktrace1.71-dev
libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev
libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev
libboost1.71-tools-dev libmpfrc++-dev libntl-dev libcurl4-doc
libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev
libssh2-1-dev pkg-config krb5-doc krb5-user liblzma-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less libmail-box-perl
python3-doc python3-tk python3-venv python3-setuptools python3.9-venv
python3.9-doc binfmt-support ri ruby-dev bundler
Recommended packages:
bzip2-doc libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales libgpm2 publicsuffix libltdl-dev
libmail-sendmail-perl psmisc python3-numpy python3-pytest python3-simplejson
python3-psutil zip fonts-lato libjs-jquery
The following NEW packages will be installed:
asciidoctor autoconf automake autopoint autotools-dev bwa ca-certificates
cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism
dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl
libarchive13 libbam-dev libbamtools-dev libbamtools2.5.1 libboost-dev
libboost1.71-dev libbrotli1 libbsd0 libbwa-dev libbz2-dev libcroco3
libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdebhelper-perl
libdeflate-dev libdeflate0 libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2
libhat-trie-dev libhat-trie0 libhts-dev libhts3 libicu67 libidn11
libjsoncpp24 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzma-dev
libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libnlopt-cxx-dev
libnlopt-cxx0 libnlopt-dev libnlopt0 libnsl2 libpipeline1 libprocps8 libpsl5
libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dev
libpython3.9-minimal libpython3.9-stdlib librhash0 librtmp1 libruby2.7
libsigsegv2 libssh2-1 libssl1.1 libssw-dev libssw0 libsub-override-perl
libtirpc-common libtirpc3 libtool libuchardet0 libuv1 libxml2 libyaml-0-2
lynx lynx-common m4 mailcap man-db media-types mime-support openssl
po-debconf procps python3 python3-dev python3-distutils python3-joblib
python3-lib2to3 python3-minimal python3-pkg-resources python3-yaml python3.9
python3.9-dev python3.9-minimal rake ruby ruby-asciidoctor ruby-minitest
ruby-net-telnet ruby-power-assert ruby-rubygems ruby-test-unit ruby-xmlrpc
ruby2.7 rubygems-integration sbuild-build-depends-spades-dummy zlib1g-dev
0 upgraded, 123 newly installed, 0 to remove and 3 not upgraded.
Need to get 62.5 MB of archives.
After this operation, 329 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-TErmtz/apt_archive ./ sbuild-build-depends-spades-dummy 0.invalid.0 [968 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1h-1 [1271 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-minimal armhf 3.9.1~rc1-2+rpi1 [789 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf python3.9-minimal armhf 3.9.1~rc1-2+rpi1 [1624 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.9.0-4 [37.8 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf media-types all 1.0.1 [18.2 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf mailcap all 3.67 [31.3 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.18.3-4 [62.3 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.18.3-4 [108 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.18.3-4 [315 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.18.3-4 [142 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libtirpc-common all 1.2.6-3 [13.3 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libtirpc3 armhf 1.2.6-3 [71.2 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libnsl2 armhf 1.3.0-2 [33.2 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.1~rc1-2+rpi1 [1653 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.1~rc1-2+rpi1 [460 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.9.0-4 [21.0 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.9.0-4 [64.1 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20201114-1 [79.5 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1h-1 [812 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf rubygems-integration all 1.17.3 [6448 B]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf rake all 13.0.1-4 [84.7 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf ruby-minitest all 5.13.0-1 [57.3 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf ruby-net-telnet all 0.1.1-2 [12.5 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf ruby-power-assert all 1.1.7-1 [11.4 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf ruby-test-unit all 3.3.5-1 [85.3 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf ruby-xmlrpc all 0.3.0-2 [23.7 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libyaml-0-2 armhf 0.2.2-1 [40.0 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libruby2.7 armhf 2.7.2-3 [3837 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf ruby2.7 armhf 2.7.2-3 [683 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf ruby-rubygems all 3.2.0~rc.2-5 [275 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf ruby armhf 1:2.7+2 [11.7 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf ruby-asciidoctor all 2.0.10-2 [201 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf asciidoctor all 2.0.10-2 [77.7 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf bwa armhf 0.7.17-5+b4 [194 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.18.4-1+rpi1 [1725 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.3-2 [294 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.42.0-1 [66.7 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.72.0-1 [300 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp24 armhf 1.9.4-3 [66.9 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.4.0-1 [133 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.40.0-1 [118 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.18.4-1+rpi1+b1 [3111 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3 [188 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3 [1009 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.6-1 [78.4 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.6-1 [145 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20201102 [99.3 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libbam-dev armhf 0.1.19+dfsg-1 [106 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libbamtools2.5.1 armhf 2.5.1+dfsg-7 [133 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libbamtools-dev armhf 2.5.1+dfsg-7 [180 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libboost1.71-dev armhf 1.71.0-7+b1 [9098 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.71.0.3+b8 [4624 B]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libbwa-dev armhf 0.7.17-5+b4 [133 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.72.0-1 [297 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-gnutls-dev armhf 7.72.0-1 [371 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libdeflate0 armhf 1.6-1 [47.4 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libdeflate-dev armhf 1.6-1 [40.8 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.10-1 [121 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libhat-trie0 armhf 0.1.2-2 [10.6 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libhat-trie-dev armhf 0.1.2-2 [19.0 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libhts3 armhf 1.11-2 [318 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libhts-dev armhf 1.11-2 [4495 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libidn11 armhf 1.33-2.4 [113 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libnlopt0 armhf 2.7.0-4 [140 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libnlopt-dev armhf 2.7.0-4 [29.8 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libnlopt-cxx0 armhf 2.7.0-4 [158 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libnlopt-cxx-dev armhf 2.7.0-4 [14.2 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9 armhf 3.9.1~rc1-2+rpi1 [1412 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-dev armhf 3.9.1~rc1-2+rpi1 [3057 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.9.0-4 [21.2 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libssw0 armhf 1.1-11 [20.4 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libssw-dev armhf 1.1-11 [23.8 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf lynx-common all 2.9.0dev.6-1 [1191 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf lynx armhf 2.9.0dev.6-1 [505 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf python3.9-dev armhf 3.9.1~rc1-2+rpi1 [501 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.9.0-4 [1164 B]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 50.3.0-1 [187 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf python3-joblib all 0.17.0-1 [213 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf python3-yaml armhf 5.3.1-3+b1 [126 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 62.5 MB in 13s (4833 kB/s)
Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 12612 files and directories currently installed.)
Preparing to unpack .../0-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../1-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../2-libpipeline1_1.5.3-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../3-man-db_2.9.3-2_armhf.deb ...
Unpacking man-db (2.9.3-2) ...
Selecting previously unselected package libssl1.1:armhf.
Preparing to unpack .../4-libssl1.1_1.1.1h-1_armhf.deb ...
Unpacking libssl1.1:armhf (1.1.1h-1) ...
Selecting previously unselected package libpython3.9-minimal:armhf.
Preparing to unpack .../5-libpython3.9-minimal_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-minimal:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../6-libexpat1_2.2.10-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.10-1) ...
Selecting previously unselected package python3.9-minimal.
Preparing to unpack .../7-python3.9-minimal_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking python3.9-minimal (3.9.1~rc1-2+rpi1) ...
Setting up libssl1.1:armhf (1.1.1h-1) ...
Setting up libpython3.9-minimal:armhf (3.9.1~rc1-2+rpi1) ...
Setting up libexpat1:armhf (2.2.10-1) ...
Setting up python3.9-minimal (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13442 files and directories currently installed.)
Preparing to unpack .../00-python3-minimal_3.9.0-4_armhf.deb ...
Unpacking python3-minimal (3.9.0-4) ...
Selecting previously unselected package media-types.
Preparing to unpack .../01-media-types_1.0.1_all.deb ...
Unpacking media-types (1.0.1) ...
Selecting previously unselected package mailcap.
Preparing to unpack .../02-mailcap_3.67_all.deb ...
Unpacking mailcap (3.67) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../03-mime-support_3.66_all.deb ...
Unpacking mime-support (3.66) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../04-libkrb5support0_1.18.3-4_armhf.deb ...
Unpacking libkrb5support0:armhf (1.18.3-4) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../05-libk5crypto3_1.18.3-4_armhf.deb ...
Unpacking libk5crypto3:armhf (1.18.3-4) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../06-libkeyutils1_1.6.1-2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../07-libkrb5-3_1.18.3-4_armhf.deb ...
Unpacking libkrb5-3:armhf (1.18.3-4) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../08-libgssapi-krb5-2_1.18.3-4_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.18.3-4) ...
Selecting previously unselected package libtirpc-common.
Preparing to unpack .../09-libtirpc-common_1.2.6-3_all.deb ...
Unpacking libtirpc-common (1.2.6-3) ...
Selecting previously unselected package libtirpc3:armhf.
Preparing to unpack .../10-libtirpc3_1.2.6-3_armhf.deb ...
Unpacking libtirpc3:armhf (1.2.6-3) ...
Selecting previously unselected package libnsl2:armhf.
Preparing to unpack .../11-libnsl2_1.3.0-2_armhf.deb ...
Unpacking libnsl2:armhf (1.3.0-2) ...
Selecting previously unselected package libpython3.9-stdlib:armhf.
Preparing to unpack .../12-libpython3.9-stdlib_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-stdlib:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3.9.
Preparing to unpack .../13-python3.9_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking python3.9 (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../14-libpython3-stdlib_3.9.0-4_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.9.0-4) ...
Setting up python3-minimal (3.9.0-4) ...
Selecting previously unselected package python3.
(Reading database ... 13909 files and directories currently installed.)
Preparing to unpack .../00-python3_3.9.0-4_armhf.deb ...
Unpacking python3 (3.9.0-4) ...
Selecting previously unselected package libncurses6:armhf.
Preparing to unpack .../01-libncurses6_6.2+20201114-1_armhf.deb ...
Unpacking libncurses6:armhf (6.2+20201114-1) ...
Selecting previously unselected package libprocps8:armhf.
Preparing to unpack .../02-libprocps8_2%3a3.3.16-5_armhf.deb ...
Unpacking libprocps8:armhf (2:3.3.16-5) ...
Selecting previously unselected package procps.
Preparing to unpack .../03-procps_2%3a3.3.16-5_armhf.deb ...
Unpacking procps (2:3.3.16-5) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../04-libmagic-mgc_1%3a5.39-3_armhf.deb ...
Unpacking libmagic-mgc (1:5.39-3) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../05-libmagic1_1%3a5.39-3_armhf.deb ...
Unpacking libmagic1:armhf (1:5.39-3) ...
Selecting previously unselected package file.
Preparing to unpack .../06-file_1%3a5.39-3_armhf.deb ...
Unpacking file (1:5.39-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../07-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package openssl.
Preparing to unpack .../08-openssl_1.1.1h-1_armhf.deb ...
Unpacking openssl (1.1.1h-1) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../09-ca-certificates_20200601_all.deb ...
Unpacking ca-certificates (20200601) ...
Selecting previously unselected package rubygems-integration.
Preparing to unpack .../10-rubygems-integration_1.17.3_all.deb ...
Unpacking rubygems-integration (1.17.3) ...
Selecting previously unselected package rake.
Preparing to unpack .../11-rake_13.0.1-4_all.deb ...
Unpacking rake (13.0.1-4) ...
Selecting previously unselected package ruby-minitest.
Preparing to unpack .../12-ruby-minitest_5.13.0-1_all.deb ...
Unpacking ruby-minitest (5.13.0-1) ...
Selecting previously unselected package ruby-net-telnet.
Preparing to unpack .../13-ruby-net-telnet_0.1.1-2_all.deb ...
Unpacking ruby-net-telnet (0.1.1-2) ...
Selecting previously unselected package ruby-power-assert.
Preparing to unpack .../14-ruby-power-assert_1.1.7-1_all.deb ...
Unpacking ruby-power-assert (1.1.7-1) ...
Selecting previously unselected package ruby-test-unit.
Preparing to unpack .../15-ruby-test-unit_3.3.5-1_all.deb ...
Unpacking ruby-test-unit (3.3.5-1) ...
Selecting previously unselected package ruby-xmlrpc.
Preparing to unpack .../16-ruby-xmlrpc_0.3.0-2_all.deb ...
Unpacking ruby-xmlrpc (0.3.0-2) ...
Selecting previously unselected package libyaml-0-2:armhf.
Preparing to unpack .../17-libyaml-0-2_0.2.2-1_armhf.deb ...
Unpacking libyaml-0-2:armhf (0.2.2-1) ...
Selecting previously unselected package libruby2.7:armhf.
Preparing to unpack .../18-libruby2.7_2.7.2-3_armhf.deb ...
Unpacking libruby2.7:armhf (2.7.2-3) ...
Selecting previously unselected package ruby2.7.
Preparing to unpack .../19-ruby2.7_2.7.2-3_armhf.deb ...
Unpacking ruby2.7 (2.7.2-3) ...
Selecting previously unselected package ruby-rubygems.
Preparing to unpack .../20-ruby-rubygems_3.2.0~rc.2-5_all.deb ...
Unpacking ruby-rubygems (3.2.0~rc.2-5) ...
Selecting previously unselected package ruby.
Preparing to unpack .../21-ruby_1%3a2.7+2_armhf.deb ...
Unpacking ruby (1:2.7+2) ...
Selecting previously unselected package ruby-asciidoctor.
Preparing to unpack .../22-ruby-asciidoctor_2.0.10-2_all.deb ...
Unpacking ruby-asciidoctor (2.0.10-2) ...
Selecting previously unselected package asciidoctor.
Preparing to unpack .../23-asciidoctor_2.0.10-2_all.deb ...
Unpacking asciidoctor (2.0.10-2) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../24-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../25-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../26-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../27-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../28-automake_1%3a1.16.2-4_all.deb ...
Unpacking automake (1:1.16.2-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../29-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package bwa.
Preparing to unpack .../30-bwa_0.7.17-5+b4_armhf.deb ...
Unpacking bwa (0.7.17-5+b4) ...
Selecting previously unselected package cmake-data.
Preparing to unpack .../31-cmake-data_3.18.4-1+rpi1_all.deb ...
Unpacking cmake-data (3.18.4-1+rpi1) ...
Selecting previously unselected package libicu67:armhf.
Preparing to unpack .../32-libicu67_67.1-4_armhf.deb ...
Unpacking libicu67:armhf (67.1-4) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../33-libxml2_2.9.10+dfsg-6.3_armhf.deb ...
Unpacking libxml2:armhf (2.9.10+dfsg-6.3) ...
Selecting previously unselected package libarchive13:armhf.
Preparing to unpack .../34-libarchive13_3.4.3-2_armhf.deb ...
Unpacking libarchive13:armhf (3.4.3-2) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../35-libbrotli1_1.0.9-2+b1_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.9-2+b1) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../36-libnghttp2-14_1.42.0-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.42.0-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../37-libpsl5_0.21.0-1.1_armhf.deb ...
Unpacking libpsl5:armhf (0.21.0-1.1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../38-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../39-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl4:armhf.
Preparing to unpack .../40-libcurl4_7.72.0-1_armhf.deb ...
Unpacking libcurl4:armhf (7.72.0-1) ...
Selecting previously unselected package libjsoncpp24:armhf.
Preparing to unpack .../41-libjsoncpp24_1.9.4-3_armhf.deb ...
Unpacking libjsoncpp24:armhf (1.9.4-3) ...
Selecting previously unselected package librhash0:armhf.
Preparing to unpack .../42-librhash0_1.4.0-1_armhf.deb ...
Unpacking librhash0:armhf (1.4.0-1) ...
Selecting previously unselected package libuv1:armhf.
Preparing to unpack .../43-libuv1_1.40.0-1_armhf.deb ...
Unpacking libuv1:armhf (1.40.0-1) ...
Selecting previously unselected package cmake.
Preparing to unpack .../44-cmake_3.18.4-1+rpi1+b1_armhf.deb ...
Unpacking cmake (3.18.4-1+rpi1+b1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../45-libtool_2.4.6-14_all.deb ...
Unpacking libtool (2.4.6-14) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../46-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../47-libdebhelper-perl_13.3_all.deb ...
Unpacking libdebhelper-perl (13.3) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../48-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../49-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../50-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../51-dh-strip-nondeterminism_1.9.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.9.0-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../52-libelf1_0.182-1_armhf.deb ...
Unpacking libelf1:armhf (0.182-1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../53-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../54-libglib2.0-0_2.66.3-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.66.3-2) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../55-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../56-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../57-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../58-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../59-debhelper_13.3_all.deb ...
Unpacking debhelper (13.3) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../60-python3-lib2to3_3.8.6-1_all.deb ...
Unpacking python3-lib2to3 (3.8.6-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../61-python3-distutils_3.8.6-1_all.deb ...
Unpacking python3-distutils (3.8.6-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../62-dh-python_4.20201102_all.deb ...
Unpacking dh-python (4.20201102) ...
Selecting previously unselected package libbam-dev.
Preparing to unpack .../63-libbam-dev_0.1.19+dfsg-1_armhf.deb ...
Unpacking libbam-dev (0.1.19+dfsg-1) ...
Selecting previously unselected package libbamtools2.5.1:armhf.
Preparing to unpack .../64-libbamtools2.5.1_2.5.1+dfsg-7_armhf.deb ...
Unpacking libbamtools2.5.1:armhf (2.5.1+dfsg-7) ...
Selecting previously unselected package libbamtools-dev:armhf.
Preparing to unpack .../65-libbamtools-dev_2.5.1+dfsg-7_armhf.deb ...
Unpacking libbamtools-dev:armhf (2.5.1+dfsg-7) ...
Selecting previously unselected package libboost1.71-dev:armhf.
Preparing to unpack .../66-libboost1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-dev:armhf.
Preparing to unpack .../67-libboost-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-dev:armhf (1.71.0.3+b8) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../68-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libbwa-dev.
Preparing to unpack .../69-libbwa-dev_0.7.17-5+b4_armhf.deb ...
Unpacking libbwa-dev (0.7.17-5+b4) ...
Selecting previously unselected package libbz2-dev:armhf.
Preparing to unpack .../70-libbz2-dev_1.0.8-4_armhf.deb ...
Unpacking libbz2-dev:armhf (1.0.8-4) ...
Selecting previously unselected package libcurl3-gnutls:armhf.
Preparing to unpack .../71-libcurl3-gnutls_7.72.0-1_armhf.deb ...
Unpacking libcurl3-gnutls:armhf (7.72.0-1) ...
Selecting previously unselected package libcurl4-gnutls-dev:armhf.
Preparing to unpack .../72-libcurl4-gnutls-dev_7.72.0-1_armhf.deb ...
Unpacking libcurl4-gnutls-dev:armhf (7.72.0-1) ...
Selecting previously unselected package libdeflate0:armhf.
Preparing to unpack .../73-libdeflate0_1.6-1_armhf.deb ...
Unpacking libdeflate0:armhf (1.6-1) ...
Selecting previously unselected package libdeflate-dev:armhf.
Preparing to unpack .../74-libdeflate-dev_1.6-1_armhf.deb ...
Unpacking libdeflate-dev:armhf (1.6-1) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../75-libexpat1-dev_2.2.10-1_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.2.10-1) ...
Selecting previously unselected package libhat-trie0:armhf.
Preparing to unpack .../76-libhat-trie0_0.1.2-2_armhf.deb ...
Unpacking libhat-trie0:armhf (0.1.2-2) ...
Selecting previously unselected package libhat-trie-dev:armhf.
Preparing to unpack .../77-libhat-trie-dev_0.1.2-2_armhf.deb ...
Unpacking libhat-trie-dev:armhf (0.1.2-2) ...
Selecting previously unselected package libhts3:armhf.
Preparing to unpack .../78-libhts3_1.11-2_armhf.deb ...
Unpacking libhts3:armhf (1.11-2) ...
Selecting previously unselected package liblzma-dev:armhf.
Preparing to unpack .../79-liblzma-dev_5.2.4-1_armhf.deb ...
Unpacking liblzma-dev:armhf (5.2.4-1) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../80-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Selecting previously unselected package libhts-dev:armhf.
Preparing to unpack .../81-libhts-dev_1.11-2_armhf.deb ...
Unpacking libhts-dev:armhf (1.11-2) ...
Selecting previously unselected package libidn11:armhf.
Preparing to unpack .../82-libidn11_1.33-2.4_armhf.deb ...
Unpacking libidn11:armhf (1.33-2.4) ...
Selecting previously unselected package libnlopt0:armhf.
Preparing to unpack .../83-libnlopt0_2.7.0-4_armhf.deb ...
Unpacking libnlopt0:armhf (2.7.0-4) ...
Selecting previously unselected package libnlopt-dev:armhf.
Preparing to unpack .../84-libnlopt-dev_2.7.0-4_armhf.deb ...
Unpacking libnlopt-dev:armhf (2.7.0-4) ...
Selecting previously unselected package libnlopt-cxx0:armhf.
Preparing to unpack .../85-libnlopt-cxx0_2.7.0-4_armhf.deb ...
Unpacking libnlopt-cxx0:armhf (2.7.0-4) ...
Selecting previously unselected package libnlopt-cxx-dev:armhf.
Preparing to unpack .../86-libnlopt-cxx-dev_2.7.0-4_armhf.deb ...
Unpacking libnlopt-cxx-dev:armhf (2.7.0-4) ...
Selecting previously unselected package libpython3.9:armhf.
Preparing to unpack .../87-libpython3.9_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libpython3.9-dev:armhf.
Preparing to unpack .../88-libpython3.9-dev_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-dev:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../89-libpython3-dev_3.9.0-4_armhf.deb ...
Unpacking libpython3-dev:armhf (3.9.0-4) ...
Selecting previously unselected package libssw0:armhf.
Preparing to unpack .../90-libssw0_1.1-11_armhf.deb ...
Unpacking libssw0:armhf (1.1-11) ...
Selecting previously unselected package libssw-dev:armhf.
Preparing to unpack .../91-libssw-dev_1.1-11_armhf.deb ...
Unpacking libssw-dev:armhf (1.1-11) ...
Selecting previously unselected package lynx-common.
Preparing to unpack .../92-lynx-common_2.9.0dev.6-1_all.deb ...
Unpacking lynx-common (2.9.0dev.6-1) ...
Selecting previously unselected package lynx.
Preparing to unpack .../93-lynx_2.9.0dev.6-1_armhf.deb ...
Unpacking lynx (2.9.0dev.6-1) ...
Selecting previously unselected package python3.9-dev.
Preparing to unpack .../94-python3.9-dev_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking python3.9-dev (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../95-python3-dev_3.9.0-4_armhf.deb ...
Unpacking python3-dev (3.9.0-4) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../96-python3-pkg-resources_50.3.0-1_all.deb ...
Unpacking python3-pkg-resources (50.3.0-1) ...
Selecting previously unselected package python3-joblib.
Preparing to unpack .../97-python3-joblib_0.17.0-1_all.deb ...
Unpacking python3-joblib (0.17.0-1) ...
Selecting previously unselected package python3-yaml.
Preparing to unpack .../98-python3-yaml_5.3.1-3+b1_armhf.deb ...
Unpacking python3-yaml (5.3.1-3+b1) ...
Selecting previously unselected package sbuild-build-depends-spades-dummy.
Preparing to unpack .../99-sbuild-build-depends-spades-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-spades-dummy (0.invalid.0) ...
Setting up media-types (1.0.1) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.21.0-1.1) ...
Setting up libicu67:armhf (67.1-4) ...
Setting up ruby-power-assert (1.1.7-1) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libyaml-0-2:armhf (0.2.2-1) ...
Setting up libglib2.0-0:armhf (2.66.3-2) ...
No schema files found: doing nothing.
Setting up bwa (0.7.17-5+b4) ...
Setting up libtirpc-common (1.2.6-3) ...
Setting up libdebhelper-perl (13.3) ...
Setting up libbrotli1:armhf (1.0.9-2+b1) ...
Setting up libboost1.71-dev:armhf (1.71.0-7+b1) ...
Setting up libnghttp2-14:armhf (1.42.0-1) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up libdeflate0:armhf (1.6-1) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up libnlopt0:armhf (2.7.0-4) ...
Setting up file (1:5.39-3) ...
Setting up libkrb5support0:armhf (1.18.3-4) ...
Setting up ruby-minitest (5.13.0-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libuv1:armhf (1.40.0-1) ...
Setting up libhat-trie0:armhf (0.1.2-2) ...
Setting up libexpat1-dev:armhf (2.2.10-1) ...
Setting up ruby-test-unit (3.3.5-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libidn11:armhf (1.33-2.4) ...
Setting up libncurses6:armhf (6.2+20201114-1) ...
Setting up ruby-net-telnet (0.1.1-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libbamtools2.5.1:armhf (2.5.1+dfsg-7) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libbam-dev (0.1.19+dfsg-1) ...
Setting up libk5crypto3:armhf (1.18.3-4) ...
Setting up lynx-common (2.9.0dev.6-1) ...
Setting up libbwa-dev (0.7.17-5+b4) ...
Setting up libnlopt-cxx0:armhf (2.7.0-4) ...
Setting up libjsoncpp24:armhf (1.9.4-3) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libhat-trie-dev:armhf (0.1.2-2) ...
Setting up librhash0:armhf (1.4.0-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up cmake-data (3.18.4-1+rpi1) ...
Setting up libkrb5-3:armhf (1.18.3-4) ...
Setting up libboost-dev:armhf (1.71.0.3+b8) ...
Setting up libnlopt-dev:armhf (2.7.0-4) ...
Setting up openssl (1.1.1h-1) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libdeflate-dev:armhf (1.6-1) ...
Setting up mailcap (3.67) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libssw0:armhf (1.1-11) ...
Setting up ruby-xmlrpc (0.3.0-2) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up libprocps8:armhf (2:3.3.16-5) ...
Setting up libbz2-dev:armhf (1.0.8-4) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up mime-support (3.66) ...
Setting up libssw-dev:armhf (1.1-11) ...
Setting up libtool (2.4.6-14) ...
Setting up libarchive13:armhf (3.4.3-2) ...
Setting up m4 (1.4.18-4) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libnlopt-cxx-dev:armhf (2.7.0-4) ...
Setting up libbamtools-dev:armhf (2.5.1+dfsg-7) ...
Setting up libgssapi-krb5-2:armhf (1.18.3-4) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up libcurl4:armhf (7.72.0-1) ...
Setting up lynx (2.9.0dev.6-1) ...
update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libtirpc3:armhf (1.2.6-3) ...
Setting up gettext (0.19.8.1-10) ...
Setting up libcurl3-gnutls:armhf (7.72.0-1) ...
Setting up rubygems-integration (1.17.3) ...
Setting up libcurl4-gnutls-dev:armhf (7.72.0-1) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libnsl2:armhf (1.3.0-2) ...
Setting up cmake (3.18.4-1+rpi1+b1) ...
Setting up libpython3.9-stdlib:armhf (3.9.1~rc1-2+rpi1) ...
Setting up libpython3-stdlib:armhf (3.9.0-4) ...
Setting up libhts3:armhf (1.11-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libhts-dev:armhf (1.11-2) ...
Setting up libpython3.9:armhf (3.9.1~rc1-2+rpi1) ...
Setting up python3.9 (3.9.1~rc1-2+rpi1) ...
Setting up libpython3.9-dev:armhf (3.9.1~rc1-2+rpi1) ...
Setting up python3 (3.9.0-4) ...
Setting up python3.9-dev (3.9.1~rc1-2+rpi1) ...
Setting up python3-lib2to3 (3.8.6-1) ...
Setting up python3-pkg-resources (50.3.0-1) ...
Setting up python3-distutils (3.8.6-1) ...
Setting up dh-python (4.20201102) ...
Setting up libpython3-dev:armhf (3.9.0-4) ...
Setting up python3-joblib (0.17.0-1) ...
Setting up python3-yaml (5.3.1-3+b1) ...
Setting up python3-dev (3.9.0-4) ...
Setting up dh-autoreconf (19) ...
Setting up rake (13.0.1-4) ...
Setting up debhelper (13.3) ...
Setting up libruby2.7:armhf (2.7.2-3) ...
Setting up ruby2.7 (2.7.2-3) ...
Setting up ruby (1:2.7+2) ...
Setting up ruby-asciidoctor (2.0.10-2) ...
Setting up asciidoctor (2.0.10-2) ...
Setting up ruby-rubygems (3.2.0~rc.2-5) ...
Setting up sbuild-build-depends-spades-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.35.1-4+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-19+rpi1 gcc-10_10.2.0-19+rpi1 libc6-dev_2.31-3+rpi1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 aptitude_0.8.13-2 aptitude-common_0.8.13-2 asciidoctor_2.0.10-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc3-1 binutils_2.35.1-4+rpi1 binutils-arm-linux-gnueabihf_2.35.1-4+rpi1 binutils-common_2.35.1-4+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bwa_0.7.17-5+b4 bzip2_1.0.8-4 ca-certificates_20200601 cmake_3.18.4-1+rpi1+b1 cmake-data_3.18.4-1+rpi1 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-19+rpi1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.3 debianutils_4.11.2 dh-autoreconf_19 dh-python_4.20201102 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-19+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-19+rpi1 gcc-10-base_10.2.0-19+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 libacl1_2.2.53-8 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan6_10.2.0-19+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-19+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbam-dev_0.1.19+dfsg-1 libbamtools-dev_2.5.1+dfsg-7 libbamtools2.5.1_2.5.1+dfsg-7 libbinutils_2.35.1-4+rpi1 libblkid1_2.36.1-2 libboost-dev_1.71.0.3+b8 libboost-iostreams1.71.0_1.71.0-7+b1 libboost1.71-dev_1.71.0-7+b1 libbrotli1_1.0.9-2+b1 libbsd0_0.10.0-1 libbwa-dev_0.7.17-5+b4 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-3+rpi1 libc6_2.31-3+rpi1 libc6-dev_2.31-3+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.0-19+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-4+rpi1 libctf0_2.35.1-4+rpi1 libcurl3-gnutls_7.72.0-1 libcurl4_7.72.0-1 libcurl4-gnutls-dev_7.72.0-1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.3 libdeflate-dev_1.6-1 libdeflate0_1.6-1 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libexpat1_2.2.10-1 libexpat1-dev_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-19+rpi1 libgcc-s1_10.2.0-19+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.0-19+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-4 libhat-trie-dev_0.1.2-2 libhat-trie0_0.1.2-2 libhogweed6_3.6-2 libhts-dev_1.11-2 libhts3_1.11-2 libicu67_67.1-4 libidn11_1.33-2.4 libidn2-0_2.3.0-4 libisl23_0.23-1 libjsoncpp24_1.9.4-3 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnlopt-cxx-dev_2.7.0-4 libnlopt-cxx0_2.7.0-4 libnlopt-dev_2.7.0-4 libnlopt0_2.7.0-4 libnpth0_1.6-3 libnsl2_1.3.0-2 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.35-2 libpcre3_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libpython3-dev_3.9.0-4 libpython3-stdlib_3.9.0-4 libpython3.9_3.9.1~rc1-2+rpi1 libpython3.9-dev_3.9.1~rc1-2+rpi1 libpython3.9-minimal_3.9.1~rc1-2+rpi1 libpython3.9-stdlib_3.9.1~rc1-2+rpi1 libreadline8_8.1~rc3-1 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libruby2.7_2.7.2-3 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsmartcols1_2.36.1-2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1h-1 libssw-dev_1.1-11 libssw0_1.1-11 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-4+rpi1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-19+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libuv1_1.40.0-1 libxapian30_1.4.17-1 libxml2_2.9.10+dfsg-6.3 libyaml-0-2_0.2.2-1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 lynx_2.9.0dev.6-1 lynx-common_2.9.0dev.6-1 m4_1.4.18-4 mailcap_3.67 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_1.0.1 mime-support_3.66 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 openssl_1.1.1h-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 procps_2:3.3.16-5 python3_3.9.0-4 python3-dev_3.9.0-4 python3-distutils_3.8.6-1 python3-joblib_0.17.0-1 python3-lib2to3_3.8.6-1 python3-minimal_3.9.0-4 python3-pkg-resources_50.3.0-1 python3-yaml_5.3.1-3+b1 python3.9_3.9.1~rc1-2+rpi1 python3.9-dev_3.9.1~rc1-2+rpi1 python3.9-minimal_3.9.1~rc1-2+rpi1 rake_13.0.1-4 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc3-1 ruby_1:2.7+2 ruby-asciidoctor_2.0.10-2 ruby-minitest_5.13.0-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_1.1.7-1 ruby-rubygems_3.2.0~rc.2-5 ruby-test-unit_3.3.5-1 ruby-xmlrpc_0.3.0-2 ruby2.7_2.7.2-3 rubygems-integration_1.17.3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-spades-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1+rpi1 tzdata_2020d-1 util-linux_2.36.1-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.TQh4MMup/trustedkeys.kbx': General error
gpgv: Signature made Fri Nov 22 09:49:38 2019 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./spades_3.13.1+dfsg-2.dsc
dpkg-source: info: extracting spades in /<<BUILDDIR>>/spades-3.13.1+dfsg
dpkg-source: info: unpacking spades_3.13.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking spades_3.13.1+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 0002_use_debian_packaged_python-joblib.patch
dpkg-source: info: applying 0003_accept-system-bwa.patch
dpkg-source: info: applying 0101_cmake_ignore_removed_python-yaml.patch
dpkg-source: info: applying 0102_cmake_ignore_removed_python-joblib.patch
dpkg-source: info: applying 0103_use-debian-packaged-bwa.patch
dpkg-source: info: applying 0110_build_single_thread.patch
dpkg-source: info: applying 0114_use_debian_provided_libs.patch
dpkg-source: info: applying 0115_enable_compiler_messages.patch
dpkg-source: info: applying 0111_use_full_config_dirs.patch
dpkg-source: info: applying 0116_stable_link_order.patch
dpkg-source: info: applying 0117_build_with_debug.patch
dpkg-source: info: applying 0118_adjust_spades_home_again.patch
dpkg-source: info: applying fix-bool-cast
dpkg-source: info: applying spelling
dpkg-source: info: applying gcc7.patch
dpkg-source: info: applying python3.patch
dpkg-source: info: applying yaml_load.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-ea19c41e-93f1-4b87-ab15-f11102473905
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package spades
dpkg-buildpackage: info: source version 3.13.1+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with python3 --sourcedirectory=assembler/src --buildsystem=cmake
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
dh_auto_clean
rm -rf build_spades
rm -rf install_spades
rm -rf spades_test
find . -name "*.pyc" -delete
rm -rf /<<BUILDDIR>>/spades-3.13.1+dfsg/debian/man_src/*.html /<<BUILDDIR>>/spades-3.13.1+dfsg/debian/man_src/*.?
rm -rf /<<BUILDDIR>>/spades-3.13.1+dfsg/debian/man
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
dh_autoreconf_clean -O--sourcedirectory=assembler/src -O--buildsystem=cmake
debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
dh_clean -X.orig
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
debian/rules build-arch
dh build-arch --with python3 --sourcedirectory=assembler/src --buildsystem=cmake
dh_update_autotools_config -a -O--sourcedirectory=assembler/src -O--buildsystem=cmake
dh_autoreconf -a -O--sourcedirectory=assembler/src -O--buildsystem=cmake
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
echo "Simply use spades_compile.sh in auto_build"
Simply use spades_compile.sh in auto_build
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
cd assembler && PREFIX=/<<BUILDDIR>>/spades-3.13.1+dfsg/install_spades ./spades_compile.sh
CMake Warning (dev) in CMakeLists.txt:
No project() command is present. The top-level CMakeLists.txt file must
contain a literal, direct call to the project() command. Add a line of
code such as
project(ProjectName)
near the top of the file, but after cmake_minimum_required().
CMake is pretending there is a "project(Project)" command on the first
line.
This warning is for project developers. Use -Wno-dev to suppress it.
-- The C compiler identification is GNU 10.2.0
-- The CXX compiler identification is GNU 10.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Warning (dev) at cmake/options.cmake:56 (set):
implicitly converting 'INTEGER' to 'STRING' type.
Call Stack (most recent call first):
CMakeLists.txt:38 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/options.cmake:57 (set):
implicitly converting 'INTEGER' to 'STRING' type.
Call Stack (most recent call first):
CMakeLists.txt:38 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11")
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
CMake Warning (dev) at /usr/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:273 (message):
The package name passed to `find_package_handle_standard_args` (readline)
does not match the name of the calling package (Readline). This can lead
to problems in calling code that expects `find_package` result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake/Modules/FindReadline.cmake:32 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
cmake/deps.cmake:19 (find_package)
CMakeLists.txt:52 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Could NOT find readline (missing: READLINE_INCLUDE_DIR READLINE_LIBRARY)
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.71.0/BoostConfig.cmake (found version "1.71.0")
Making Release Configuration...
Building SPAdes from N/A, sha: N/A
-- Looking for include file features.h
-- Looking for include file features.h - found
-- Looking for include file sys/cdefs.h
-- Looking for include file sys/cdefs.h - found
-- Looking for atomic_fetchadd_long
-- Looking for atomic_fetchadd_long - not found
-- Looking for OSAtomicAdd64
-- Looking for OSAtomicAdd64 - not found
-- Looking for OSSpinLockLock
-- Looking for OSSpinLockLock - not found
-- Looking for _malloc_thread_cleanup
-- Looking for _malloc_thread_cleanup - not found
-- Looking for _pthread_mutex_init_calloc_cb,
-- Looking for _pthread_mutex_init_calloc_cb, - not found
-- Looking for sbrk
-- Looking for sbrk - found
-- Performing Test JEMALLOC_TLS_MODEL_SUPPORTED
-- Performing Test JEMALLOC_TLS_MODEL_SUPPORTED - Success
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of void*
-- Check size of void* - done
CMake Error at /<<BUILDDIR>>/spades-3.13.1+dfsg/assembler/ext/src/jemalloc/CMakeLists.txt:79 (message):
Unsupported pointer size
-- Configuring incomplete, errors occurred!
See also "/<<BUILDDIR>>/spades-3.13.1+dfsg/assembler/build_spades/CMakeFiles/CMakeOutput.log".
See also "/<<BUILDDIR>>/spades-3.13.1+dfsg/assembler/build_spades/CMakeFiles/CMakeError.log".
make[1]: *** [debian/rules:42: override_dh_auto_build] Error 1
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
make: *** [debian/rules:24: build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2020-12-12T01:43:54Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 22012
Build-Time: 19
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 517
Job: spades_3.13.1+dfsg-2
Machine Architecture: armhf
Package: spades
Package-Time: 555
Source-Version: 3.13.1+dfsg-2
Space: 22012
Status: attempted
Version: 3.13.1+dfsg-2
--------------------------------------------------------------------------------
Finished at 2020-12-12T01:43:54Z
Build needed 00:09:15, 22012k disk space