Raspbian Package Auto-Building

Build log for spades (3.13.1+dfsg-2) on armhf

spades3.13.1+dfsg-2armhf → 2020-08-14 20:56:26

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01

+==============================================================================+
| spades 3.13.1+dfsg-2 (armhf)                 Fri, 14 Aug 2020 20:38:55 +0000 |
+==============================================================================+

Package: spades
Version: 3.13.1+dfsg-2
Source Version: 3.13.1+dfsg-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-3b5be54b-2cae-420f-8a65-82f8ef2eb499' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.8 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.8 MB in 32s (782 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'spades' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/spades.git
Please use:
git clone https://salsa.debian.org/med-team/spades.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3230 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main spades 3.13.1+dfsg-2 (dsc) [2381 B]
Get:2 http://172.17.0.1/private bullseye-staging/main spades 3.13.1+dfsg-2 (tar) [3203 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main spades 3.13.1+dfsg-2 (diff) [25.2 kB]
Fetched 3230 kB in 1s (3942 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/spades-MfIFDV/spades-3.13.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/spades-MfIFDV' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-pTk7oO/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-pTk7oO/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-pTk7oO/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (1678 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-pTk7oO/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  bsdextrautils libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12502 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12), dh-python, cmake, python3-dev, zlib1g-dev, libbz2-dev, libboost-dev, libbam-dev, libbamtools-dev, libhat-trie-dev, libhts-dev, libnlopt-dev, libnlopt-cxx-dev, libssw-dev, python3-yaml, python3-joblib, asciidoctor (>= 1.5.3), bwa, libbwa-dev, lynx
Filtered Build-Depends: debhelper-compat (= 12), dh-python, cmake, python3-dev, zlib1g-dev, libbz2-dev, libboost-dev, libbam-dev, libbamtools-dev, libhat-trie-dev, libhts-dev, libnlopt-dev, libnlopt-cxx-dev, libssw-dev, python3-yaml, python3-joblib, asciidoctor (>= 1.5.3), bwa, libbwa-dev, lynx
dpkg-deb: building package 'sbuild-build-depends-spades-dummy' in '/<<BUILDDIR>>/resolver-pTk7oO/apt_archive/sbuild-build-depends-spades-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-spades-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Sources [601 B]
Get:5 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Packages [683 B]
Fetched 2617 B in 1s (3520 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-pTk7oO/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install spades build dependencies (apt-based resolver)
------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  asciidoctor autoconf automake autopoint autotools-dev bwa ca-certificates
  cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl
  libarchive13 libbam-dev libbamtools-dev libbamtools2.5.1 libboost-dev
  libboost1.71-dev libbrotli1 libbsd0 libbwa-dev libbz2-dev libcroco3
  libcurl3-gnutls libcurl4 libdebhelper-perl libdeflate0 libelf1 libexpat1
  libexpat1-dev libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2
  libhat-trie-dev libhat-trie0 libhts-dev libhts3 libicu67 libidn11
  libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzma-dev
  libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libnlopt-cxx-dev
  libnlopt-cxx0 libnlopt-dev libnlopt0 libpipeline1 libprocps8 libpsl5
  libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
  libpython3.8-minimal libpython3.8-stdlib librhash0 librtmp1 libruby2.7
  libsigsegv2 libssh2-1 libssl1.1 libssw-dev libssw0 libsub-override-perl
  libtool libuchardet0 libuv1 libxml2 libyaml-0-2 lynx lynx-common m4 man-db
  mime-support openssl po-debconf procps python3 python3-dev python3-distutils
  python3-joblib python3-lib2to3 python3-minimal python3-pkg-resources
  python3-yaml python3.8 python3.8-dev python3.8-minimal rake ruby
  ruby-asciidoctor ruby-minitest ruby-net-telnet ruby-power-assert
  ruby-test-unit ruby-xmlrpc ruby2.7 rubygems-integration zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc samtools cmake-doc ninja-build
  dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip
  libbamtools-doc libboost-doc libboost1.71-doc libboost-atomic1.71-dev
  libboost-chrono1.71-dev libboost-container1.71-dev libboost-context1.71-dev
  libboost-contract1.71-dev libboost-coroutine1.71-dev
  libboost-date-time1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev
  libboost-filesystem1.71-dev libboost-graph1.71-dev
  libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev
  libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev
  libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev
  libboost-program-options1.71-dev libboost-python1.71-dev
  libboost-random1.71-dev libboost-regex1.71-dev
  libboost-serialization1.71-dev libboost-stacktrace1.71-dev
  libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev
  libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev
  libboost1.71-tools-dev libmpfrc++-dev libntl-dev krb5-doc krb5-user
  liblzma-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
  apparmor less libmail-box-perl python3-doc python3-tk python3-venv
  python3-setuptools python3.8-venv python3.8-doc binfmt-support ri ruby-dev
  bundler
Recommended packages:
  bzip2-doc libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs krb5-locales libgpm2 publicsuffix libltdl-dev
  libmail-sendmail-perl psmisc python3-numpy python3-pytest python3-simplejson
  python3-psutil zip fonts-lato libjs-jquery
The following NEW packages will be installed:
  asciidoctor autoconf automake autopoint autotools-dev bwa ca-certificates
  cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl
  libarchive13 libbam-dev libbamtools-dev libbamtools2.5.1 libboost-dev
  libboost1.71-dev libbrotli1 libbsd0 libbwa-dev libbz2-dev libcroco3
  libcurl3-gnutls libcurl4 libdebhelper-perl libdeflate0 libelf1 libexpat1
  libexpat1-dev libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2
  libhat-trie-dev libhat-trie0 libhts-dev libhts3 libicu67 libidn11
  libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzma-dev
  libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libnlopt-cxx-dev
  libnlopt-cxx0 libnlopt-dev libnlopt0 libpipeline1 libprocps8 libpsl5
  libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
  libpython3.8-minimal libpython3.8-stdlib librhash0 librtmp1 libruby2.7
  libsigsegv2 libssh2-1 libssl1.1 libssw-dev libssw0 libsub-override-perl
  libtool libuchardet0 libuv1 libxml2 libyaml-0-2 lynx lynx-common m4 man-db
  mime-support openssl po-debconf procps python3 python3-dev python3-distutils
  python3-joblib python3-lib2to3 python3-minimal python3-pkg-resources
  python3-yaml python3.8 python3.8-dev python3.8-minimal rake ruby
  ruby-asciidoctor ruby-minitest ruby-net-telnet ruby-power-assert
  ruby-test-unit ruby-xmlrpc ruby2.7 rubygems-integration
  sbuild-build-depends-spades-dummy zlib1g-dev
0 upgraded, 115 newly installed, 0 to remove and 0 not upgraded.
Need to get 59.9 MB/61.2 MB of archives.
After this operation, 320 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-pTk7oO/apt_archive ./ sbuild-build-depends-spades-dummy 0.invalid.0 [964 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.5-2 [752 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.5-2 [1628 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.8.2-3 [37.6 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.5-2 [1677 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.5-2 [420 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.8.2-3 [20.8 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.8.2-3 [63.7 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf rubygems-integration all 1.17.2 [6384 B]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf rake all 13.0.1-4 [84.7 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf ruby-minitest all 5.13.0-1 [57.3 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf ruby-net-telnet all 0.1.1-2 [12.5 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf ruby-power-assert all 1.1.7-1 [11.4 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf ruby-test-unit all 3.3.5-1 [85.3 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf ruby-xmlrpc all 0.3.0-2 [23.7 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libyaml-0-2 armhf 0.2.2-1 [40.0 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libruby2.7 armhf 2.7.1-3 [3806 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf ruby2.7 armhf 2.7.1-3 [670 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf ruby armhf 1:2.7+1 [11.5 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf ruby-asciidoctor all 2.0.10-2 [201 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf asciidoctor all 2.0.10-2 [77.7 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-3 [801 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf bwa armhf 0.7.17-5+b2 [200 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.16.3-3+rpi1 [1628 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-3 [8287 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5+b1 [593 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.3-2 [294 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-7 [258 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-10+b3 [62.0 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-10+b3 [112 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-10+b3 [318 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-10+b3 [135 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.41.0-2 [61.2 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1+b1 [286 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3.1 [65.8 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.4.0-1 [133 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.38.0-3 [115 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.16.3-3+rpi1 [2653 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2 [187 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.180-1 [162 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.4-1 [1159 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2 [1007 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.5-1 [78.4 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.5-1 [145 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20200315 [91.6 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libbam-dev armhf 0.1.19-4 [111 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libbamtools2.5.1 armhf 2.5.1+dfsg-7 [133 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libbamtools-dev armhf 2.5.1+dfsg-7 [180 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libboost1.71-dev armhf 1.71.0-6+b1 [9099 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.71.0.3+b3 [4620 B]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libbwa-dev armhf 0.7.17-5+b2 [138 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.68.0-1+b1 [285 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libdeflate0 armhf 1.6-1 [47.4 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libhat-trie0 armhf 0.1.2-2 [10.6 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libhat-trie-dev armhf 0.1.2-2 [19.0 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libhts3 armhf 1.10.2-5 [321 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libhts-dev armhf 1.10.2-5 [4796 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libidn11 armhf 1.33-2.4 [113 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libnlopt0 armhf 2.6.1-8 [138 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libnlopt-dev armhf 2.6.1-8 [29.6 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libnlopt-cxx0 armhf 2.6.1-8 [156 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libnlopt-cxx-dev armhf 2.6.1-8 [14.6 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.5-2 [1363 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.5-2 [3053 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.2-3 [21.0 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libssw0 armhf 1.1-9 [21.5 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libssw-dev armhf 1.1-9 [24.8 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf lynx-common all 2.9.0dev.5-1 [1192 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf lynx armhf 2.9.0dev.5-1 [501 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.5-2 [515 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.2-3 [1164 B]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 46.1.3-1 [183 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf python3-joblib all 0.14.0-3 [203 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf python3-yaml armhf 5.3.1-2 [133 kB]
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Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.21.0-1.1) ...
Setting up mime-support (3.64) ...
Setting up libicu67:armhf (67.1-3) ...
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No schema files found: doing nothing.
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Setting up libbrotli1:armhf (1.0.7-7) ...
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Setting up libnghttp2-14:armhf (1.41.0-2) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up libdeflate0:armhf (1.6-1) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up libnlopt0:armhf (2.6.1-8) ...
Setting up file (1:5.38-5) ...
Setting up libkrb5support0:armhf (1.17-10+b3) ...
Setting up ruby-minitest (5.13.0-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libuv1:armhf (1.38.0-3) ...
Setting up libhat-trie0:armhf (0.1.2-2) ...
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up ruby-test-unit (3.3.5-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libidn11:armhf (1.33-2.4) ...
Setting up libncurses6:armhf (6.2-1) ...
Setting up ruby-net-telnet (0.1.1-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libbamtools2.5.1:armhf (2.5.1+dfsg-7) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libbam-dev (0.1.19-4) ...
Setting up libk5crypto3:armhf (1.17-10+b3) ...
Setting up lynx-common (2.9.0dev.5-1) ...
Setting up libbwa-dev (0.7.17-5+b2) ...
Setting up libnlopt-cxx0:armhf (2.6.1-8) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libhat-trie-dev:armhf (0.1.2-2) ...
Setting up librhash0:armhf (1.4.0-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up cmake-data (3.16.3-3+rpi1) ...
Setting up libkrb5-3:armhf (1.17-10+b3) ...
Setting up libboost-dev:armhf (1.71.0.3+b3) ...
Setting up libpython3.8-stdlib:armhf (3.8.5-2) ...
Setting up libnlopt-dev:armhf (2.6.1-8) ...
Setting up python3.8 (3.8.5-2) ...
Setting up openssl (1.1.1g-1) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libelf1:armhf (0.180-1) ...
Setting up libssw0:armhf (1.1-9) ...
Setting up ruby-xmlrpc (0.3.0-2) ...
Setting up libxml2:armhf (2.9.10+dfsg-5+b1) ...
Setting up libprocps8:armhf (2:3.3.16-5) ...
Setting up libjsoncpp1:armhf (1.7.4-3.1) ...
Setting up libpython3-stdlib:armhf (3.8.2-3) ...
Setting up libbz2-dev:armhf (1.0.8-4) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up libssw-dev:armhf (1.1-9) ...
Setting up libtool (2.4.6-14) ...
Setting up libarchive13:armhf (3.4.3-2) ...
Setting up m4 (1.4.18-4) ...
Setting up python3 (3.8.2-3) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libnlopt-cxx-dev:armhf (2.6.1-8) ...
Setting up libpython3.8:armhf (3.8.5-2) ...
Setting up libbamtools-dev:armhf (2.5.1+dfsg-7) ...
Setting up libgssapi-krb5-2:armhf (1.17-10+b3) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up libcurl4:armhf (7.68.0-1+b1) ...
Setting up lynx (2.9.0dev.5-1) ...
update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode
Setting up python3-lib2to3 (3.8.5-1) ...
Setting up python3-pkg-resources (46.1.3-1) ...
Setting up automake (1:1.16.2-3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3-distutils (3.8.5-1) ...
Setting up dh-python (4.20200315) ...
Setting up gettext (0.19.8.1-10) ...
Setting up python3-joblib (0.14.0-3) ...
Setting up python3-yaml (5.3.1-2) ...
Setting up libcurl3-gnutls:armhf (7.68.0-1+b1) ...
Setting up rubygems-integration (1.17.2) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython3.8-dev:armhf (3.8.5-2) ...
Setting up python3.8-dev (3.8.5-2) ...
Setting up cmake (3.16.3-3+rpi1) ...
Setting up libhts3:armhf (1.10.2-5) ...
Setting up libpython3-dev:armhf (3.8.2-3) ...
Setting up po-debconf (1.0.21) ...
Setting up libhts-dev:armhf (1.10.2-5) ...
Setting up python3-dev (3.8.2-3) ...
Setting up dh-autoreconf (19) ...
Setting up rake (13.0.1-4) ...
Setting up debhelper (13.2) ...
Setting up libruby2.7:armhf (2.7.1-3) ...
Setting up ruby2.7 (2.7.1-3) ...
Setting up ruby (1:2.7+1) ...
Setting up ruby-asciidoctor (2.0.10-2) ...
Setting up asciidoctor (2.0.10-2) ...
Setting up sbuild-build-depends-spades-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-3+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35-1+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.1.0-6+rpi1 gcc-10_10.1.0-6+rpi1 libc6-dev_2.31-3+rpi1 libstdc++-10-dev_10.1.0-6+rpi1 libstdc++6_10.1.0-6+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.10 aptitude_0.8.13-1+b1 aptitude-common_0.8.13-1 asciidoctor_2.0.10-2 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-7 binutils_2.35-1+rpi1 binutils-arm-linux-gnueabihf_2.35-1+rpi1 binutils-common_2.35-1+rpi1 bsdextrautils_2.36-2 bsdutils_1:2.36-2 build-essential_12.8 bwa_0.7.17-5+b2 bzip2_1.0.8-4 ca-certificates_20200601 cmake_3.16.3-3+rpi1 cmake-data_3.16.3-3+rpi1 coreutils_8.30-3 cpp_4:10.1.0-1+rpi1 cpp-10_10.1.0-6+rpi1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20200315 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.36-2 file_1:5.38-5 findutils_4.7.0-1 g++_4:10.1.0-1+rpi1 g++-10_10.1.0-6+rpi1 gcc_4:10.1.0-1+rpi1 gcc-10_10.1.0-6+rpi1 gcc-10-base_10.1.0-6+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-8 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan6_10.1.0-6+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.1.0-6+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbam-dev_0.1.19-4 libbamtools-dev_2.5.1+dfsg-7 libbamtools2.5.1_2.5.1+dfsg-7 libbinutils_2.35-1+rpi1 libblkid1_2.36-2 libboost-dev_1.71.0.3+b3 libboost-iostreams1.71.0_1.71.0-6+b1 libboost1.71-dev_1.71.0-6+b1 libbrotli1_1.0.7-7 libbsd0_0.10.0-1 libbwa-dev_0.7.17-5+b2 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-3+rpi1 libc-dev-bin_2.31-3+rpi1 libc6_2.31-3+rpi1 libc6-dev_2.31-3+rpi1 libcap-ng0_0.7.9-2.2 libcap2_1:2.42-2 libcap2-bin_1:2.42-2 libcc1-0_10.1.0-6+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.35-1+rpi1 libctf0_2.35-1+rpi1 libcurl3-gnutls_7.68.0-1+b1 libcurl4_7.68.0-1+b1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.253 libdebhelper-perl_13.2 libdeflate0_1.6-1 libdpkg-perl_1.20.5+rpi1 libelf1_0.180-1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.36-2 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.1.0-6+rpi1 libgcc-s1_10.1.0-6+rpi1 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2+b1 libgomp1_10.1.0-6+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10+b3 libhat-trie-dev_0.1.2-2 libhat-trie0_0.1.2-2 libhogweed6_3.6-2 libhts-dev_1.10.2-5 libhts3_1.10.2-5 libicu67_67.1-3 libidn11_1.33-2.4 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-10+b3 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10+b3 libkrb5support0_1.17-10+b3 libksba8_1.4.0-2 libldap-2.4-2_2.4.50+dfsg-1+b1 libldap-common_2.4.50+dfsg-1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-2 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-2 libnlopt-cxx-dev_2.6.1-8 libnlopt-cxx0_2.6.1-8 libnlopt-dev_2.6.1-8 libnlopt0_2.6.1-8 libnpth0_1.6-2 libp11-kit0_0.23.20-1 libpam-cap_1:2.42-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libpython3-dev_3.8.2-3 libpython3-stdlib_3.8.2-3 libpython3.8_3.8.5-2 libpython3.8-dev_3.8.5-2 libpython3.8-minimal_3.8.5-2 libpython3.8-stdlib_3.8.5-2 libreadline8_8.0-4 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libruby2.7_2.7.1-3 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.2-1 libsigsegv2_2.12-2 libsmartcols1_2.36-2 libsqlite3-0_3.32.3-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libssw-dev_1.1-9 libssw0_1.1-9 libstdc++-10-dev_10.1.0-6+rpi1 libstdc++6_10.1.0-6+rpi1 libsub-override-perl_0.09-2 libsystemd0_245.6-2+rpi1+b1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.1.0-6+rpi1 libuchardet0_0.0.7-1 libudev1_245.6-2+rpi1+b1 libunistring2_0.9.10-4 libuuid1_2.36-2 libuv1_1.38.0-3 libxapian30_1.4.15-1 libxml2_2.9.10+dfsg-5+b1 libyaml-0-2_0.2.2-1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 lynx_2.9.0dev.5-1 lynx-common_2.9.0dev.5-1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.36-2 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 po-debconf_1.0.21 procps_2:3.3.16-5 python3_3.8.2-3 python3-dev_3.8.2-3 python3-distutils_3.8.5-1 python3-joblib_0.14.0-3 python3-lib2to3_3.8.5-1 python3-minimal_3.8.2-3 python3-pkg-resources_46.1.3-1 python3-yaml_5.3.1-2 python3.8_3.8.5-2 python3.8-dev_3.8.5-2 python3.8-minimal_3.8.5-2 rake_13.0.1-4 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 ruby_1:2.7+1 ruby-asciidoctor_2.0.10-2 ruby-minitest_5.13.0-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_1.1.7-1 ruby-test-unit_3.3.5-1 ruby-xmlrpc_0.3.0-2 ruby2.7_2.7.1-3 rubygems-integration_1.17.2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-spades-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 util-linux_2.36-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.ianTWKKR/trustedkeys.kbx': General error
gpgv: Signature made Fri Nov 22 09:49:38 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./spades_3.13.1+dfsg-2.dsc
dpkg-source: info: extracting spades in /<<BUILDDIR>>/spades-3.13.1+dfsg
dpkg-source: info: unpacking spades_3.13.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking spades_3.13.1+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 0002_use_debian_packaged_python-joblib.patch
dpkg-source: info: applying 0003_accept-system-bwa.patch
dpkg-source: info: applying 0101_cmake_ignore_removed_python-yaml.patch
dpkg-source: info: applying 0102_cmake_ignore_removed_python-joblib.patch
dpkg-source: info: applying 0103_use-debian-packaged-bwa.patch
dpkg-source: info: applying 0110_build_single_thread.patch
dpkg-source: info: applying 0114_use_debian_provided_libs.patch
dpkg-source: info: applying 0115_enable_compiler_messages.patch
dpkg-source: info: applying 0111_use_full_config_dirs.patch
dpkg-source: info: applying 0116_stable_link_order.patch
dpkg-source: info: applying 0117_build_with_debug.patch
dpkg-source: info: applying 0118_adjust_spades_home_again.patch
dpkg-source: info: applying fix-bool-cast
dpkg-source: info: applying spelling
dpkg-source: info: applying gcc7.patch
dpkg-source: info: applying python3.patch
dpkg-source: info: applying yaml_load.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-3b5be54b-2cae-420f-8a65-82f8ef2eb499
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package spades
dpkg-buildpackage: info: source version 3.13.1+dfsg-2
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean  --with python3 --sourcedirectory=assembler/src --buildsystem=cmake
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
dh_auto_clean
rm -rf build_spades
rm -rf install_spades
rm -rf spades_test
find . -name "*.pyc" -delete
rm -rf /<<BUILDDIR>>/spades-3.13.1+dfsg/debian/man_src/*.html /<<BUILDDIR>>/spades-3.13.1+dfsg/debian/man_src/*.?
rm -rf /<<BUILDDIR>>/spades-3.13.1+dfsg/debian/man
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
   dh_autoreconf_clean -O--sourcedirectory=assembler/src -O--buildsystem=cmake
   debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
dh_clean -X.orig
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
 debian/rules build-arch
dh build-arch  --with python3 --sourcedirectory=assembler/src --buildsystem=cmake
   dh_update_autotools_config -a -O--sourcedirectory=assembler/src -O--buildsystem=cmake
   dh_autoreconf -a -O--sourcedirectory=assembler/src -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
echo "Simply use spades_compile.sh in auto_build"
Simply use spades_compile.sh in auto_build
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
cd assembler && PREFIX=/<<BUILDDIR>>/spades-3.13.1+dfsg/install_spades ./spades_compile.sh
CMake Warning (dev) in CMakeLists.txt:
  No project() command is present.  The top-level CMakeLists.txt file must
  contain a literal, direct call to the project() command.  Add a line of
  code such as

    project(ProjectName)

  near the top of the file, but after cmake_minimum_required().

  CMake is pretending there is a "project(Project)" command on the first
  line.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- The C compiler identification is GNU 10.1.0
-- The CXX compiler identification is GNU 10.1.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Warning (dev) at cmake/options.cmake:56 (set):
  implicitly converting 'INTEGER' to 'STRING' type.
Call Stack (most recent call first):
  CMakeLists.txt:38 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/options.cmake:57 (set):
  implicitly converting 'INTEGER' to 'STRING' type.
Call Stack (most recent call first):
  CMakeLists.txt:38 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11") 
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.8") 
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Could NOT find readline (missing: READLINE_INCLUDE_DIR READLINE_LIBRARY) 
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.71.0/BoostConfig.cmake (found version "1.71.0")  
Making Release Configuration...
Building SPAdes from N/A, sha: N/A
-- Looking for include file features.h
-- Looking for include file features.h - found
-- Looking for include file sys/cdefs.h
-- Looking for include file sys/cdefs.h - found
-- Looking for atomic_fetchadd_long
-- Looking for atomic_fetchadd_long - not found
-- Looking for OSAtomicAdd64
-- Looking for OSAtomicAdd64 - not found
-- Looking for OSSpinLockLock
-- Looking for OSSpinLockLock - not found
-- Looking for _malloc_thread_cleanup
-- Looking for _malloc_thread_cleanup - not found
-- Looking for _pthread_mutex_init_calloc_cb,
-- Looking for _pthread_mutex_init_calloc_cb, - not found
-- Looking for sbrk
-- Looking for sbrk - found
-- Performing Test JEMALLOC_TLS_MODEL_SUPPORTED
-- Performing Test JEMALLOC_TLS_MODEL_SUPPORTED - Success
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of void*
-- Check size of void* - done
CMake Error at /<<BUILDDIR>>/spades-3.13.1+dfsg/assembler/ext/src/jemalloc/CMakeLists.txt:79 (message):
  Unsupported pointer size


-- Configuring incomplete, errors occurred!
See also "/<<BUILDDIR>>/spades-3.13.1+dfsg/assembler/build_spades/CMakeFiles/CMakeOutput.log".
See also "/<<BUILDDIR>>/spades-3.13.1+dfsg/assembler/build_spades/CMakeFiles/CMakeError.log".
make[1]: *** [debian/rules:42: override_dh_auto_build] Error 1
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.13.1+dfsg'
make: *** [debian/rules:24: build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2020-08-14T20:56:18Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 0
Build-Time: 52
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 918
Job: spades_3.13.1+dfsg-2
Machine Architecture: armhf
Package: spades
Package-Time: 1043
Source-Version: 3.13.1+dfsg-2
Space: 0
Status: failed
Version: 3.13.1+dfsg-2
--------------------------------------------------------------------------------
Finished at 2020-08-14T20:56:18Z
Build needed 00:00:00, 0k disc space