scrappie →
1.4.2-4 →
armhf → 2020-12-14 13:11:39
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| scrappie 1.4.2-4 (armhf) Mon, 14 Dec 2020 10:47:05 +0000 |
+==============================================================================+
Package: scrappie
Version: 1.4.2-4
Source Version: 1.4.2-4
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-39784b73-8bf0-48d6-9ba0-6e054bab1bb4' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.0 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 24.9 MB in 27s (908 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'scrappie' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/scrappie.git
Please use:
git clone https://salsa.debian.org/med-team/scrappie.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 21.8 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main scrappie 1.4.2-4 (dsc) [2112 B]
Get:2 http://172.17.0.1/private bullseye-staging/main scrappie 1.4.2-4 (tar) [21.8 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main scrappie 1.4.2-4 (diff) [14.0 kB]
Fetched 21.8 MB in 7s (2930 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/scrappie-3RctaB/scrappie-1.4.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/scrappie-3RctaB' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-bSHi8P/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-bSHi8P/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-bSHi8P/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (2834 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 5 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.6 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12798 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), libcunit1-dev, libhdf5-dev, libopenblas-dev, cmake, libsimde-dev
Filtered Build-Depends: debhelper-compat (= 13), libcunit1-dev, libhdf5-dev, libopenblas-dev, cmake, libsimde-dev
dpkg-deb: building package 'sbuild-build-depends-scrappie-dummy' in '/<<BUILDDIR>>/resolver-bSHi8P/apt_archive/sbuild-build-depends-scrappie-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-scrappie-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Sources [524 B]
Get:5 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ Packages [603 B]
Fetched 2460 B in 1s (3053 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install scrappie build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev cmake cmake-data debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base hdf5-helpers intltool-debian libaec-dev libaec0
libarchive-zip-perl libarchive13 libbrotli1 libcroco3 libcunit1
libcunit1-dev libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libhdf5-103-1
libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100
libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libicu67 libjpeg-dev
libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp24 libmagic-mgc libmagic1
libncurses6 libnghttp2-14 libopenblas-dev libopenblas-pthread-dev
libopenblas0 libopenblas0-pthread libpipeline1 libprocps8 libpsl5 librhash0
librtmp1 libsigsegv2 libsimde-dev libssh2-1 libsub-override-perl libsz2
libtool libuchardet0 libuv1 libxml2 m4 man-db po-debconf procps zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build dh-make
gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libcunit1-doc
libhdf5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
apparmor less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libgpm2 publicsuffix libltdl-dev
libmail-sendmail-perl psmisc
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev cmake cmake-data debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base hdf5-helpers intltool-debian libaec-dev libaec0
libarchive-zip-perl libarchive13 libbrotli1 libcroco3 libcunit1
libcunit1-dev libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libhdf5-103-1
libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100
libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libicu67 libjpeg-dev
libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp24 libmagic-mgc libmagic1
libncurses6 libnghttp2-14 libopenblas-dev libopenblas-pthread-dev
libopenblas0 libopenblas0-pthread libpipeline1 libprocps8 libpsl5 librhash0
librtmp1 libsigsegv2 libsimde-dev libssh2-1 libsub-override-perl libsz2
libtool libuchardet0 libuv1 libxml2 m4 man-db po-debconf procps
sbuild-build-depends-scrappie-dummy zlib1g-dev
0 upgraded, 71 newly installed, 0 to remove and 5 not upgraded.
Need to get 34.4 MB of archives.
After this operation, 149 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-bSHi8P/apt_archive ./ sbuild-build-depends-scrappie-dummy 0.invalid.0 [892 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20201114-1 [79.5 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.18.4-1+rpi1 [1725 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-5 [8288 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.3-2 [294 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.42.0-1 [66.7 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.9.0-1 [141 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.72.0-1 [300 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp24 armhf 1.9.4-3 [66.9 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.4.0-1 [133 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.40.0-1 [118 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.18.4-1+rpi1+b1 [3111 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3 [188 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20201015-2 [162 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3 [1009 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.6+repack-2 [40.0 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libcunit1 armhf 2.1-3-dfsg-2.3 [30.2 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libcunit1-dev armhf 2.1-3-dfsg-2.3 [58.2 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-19+rpi1 [231 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103-1 armhf 1.10.6+repack-2 [1184 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-2 [128 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-fortran-102 armhf 1.10.6+repack-2 [93.0 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-100 armhf 1.10.6+repack-2 [78.1 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-2 [49.8 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-2 [36.9 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:2.0.5-1.1 [241 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:2.0.5-1.1 [66.0 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.6+repack-2 [2167 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libopenblas0-pthread armhf 0.3.12+ds-2+rpi1 [2152 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libopenblas0 armhf 0.3.12+ds-2+rpi1 [32.1 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libopenblas-pthread-dev armhf 0.3.12+ds-2+rpi1 [2000 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libopenblas-dev armhf 0.3.12+ds-2+rpi1 [43.3 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libsimde-dev all 0.6.0-3 [213 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 12798 files and directories currently installed.)
Preparing to unpack .../00-libuchardet0_0.0.7-1_armhf.deb ...
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Preparing to unpack .../04-libncurses6_6.2+20201114-1_armhf.deb ...
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Unpacking libicu67:armhf (67.1-5) ...
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Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libncurses6:armhf (6.2+20201114-1) ...
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Setting up autopoint (0.19.8.1-10) ...
Setting up libgfortran5:armhf (10.2.0-19+rpi1) ...
Setting up libjsoncpp24:armhf (1.9.4-3) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
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Setting up cmake-data (3.18.4-1+rpi1) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up libprocps8:armhf (2:3.3.16-5) ...
Setting up libsz2:armhf (1.0.4-1) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up libopenblas0-pthread:armhf (0.3.12+ds-2+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openblas-pthread/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openblas-pthread/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openblas-pthread/libopenblas.so.0 to provide /usr/lib/arm-linux-gnueabihf/libopenblas.so.0 (libopenblas.so.0-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-14) ...
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Setting up libaec-dev:armhf (1.0.4-1) ...
Setting up libjpeg-dev (1:2.0.5-1.1) ...
Setting up m4 (1.4.18-4) ...
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Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up libhdf5-103-1:armhf (1.10.6+repack-2) ...
Setting up dwz (0.13+20201015-2) ...
Setting up libopenblas0:armhf (0.3.12+ds-2+rpi1) ...
Setting up groff-base (1.22.4-5) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
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Setting up libcurl4:armhf (7.72.0-1) ...
Setting up libhdf5-hl-100:armhf (1.10.6+repack-2) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libopenblas-pthread-dev:armhf (0.3.12+ds-2+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openblas-pthread/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openblas-pthread/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openblas-pthread/libopenblas.so to provide /usr/lib/arm-linux-gnueabihf/libopenblas.so (libopenblas.so-arm-linux-gnueabihf) in auto mode
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libopenblas-dev:armhf (0.3.12+ds-2+rpi1) ...
Setting up libhdf5-hl-cpp-100:armhf (1.10.6+repack-2) ...
Setting up libhdf5-fortran-102:armhf (1.10.6+repack-2) ...
Setting up cmake (3.18.4-1+rpi1+b1) ...
Setting up libhdf5-hl-fortran-100:armhf (1.10.6+repack-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libhdf5-dev (1.10.6+repack-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.3) ...
Setting up sbuild-build-depends-scrappie-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-4+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-19+rpi1 gcc-10_10.2.0-19+rpi1 libc6-dev_2.31-5+rpi1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc3-1 binutils_2.35.1-4+rpi1 binutils-arm-linux-gnueabihf_2.35.1-4+rpi1 binutils-common_2.35.1-4+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 cmake_3.18.4-1+rpi1+b1 cmake-data_3.18.4-1+rpi1 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-19+rpi1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.3 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-19+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-19+rpi1 gcc-10-base_10.2.0-19+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hdf5-helpers_1.10.6+repack-2 hostname_3.23 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 krb5-locales_1.18.3-4 libacl1_2.2.53-8 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan6_10.2.0-19+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-19+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbinutils_2.35.1-4+rpi1 libblkid1_2.36.1-2 libboost-iostreams1.71.0_1.71.0-7+b1 libbrotli1_1.0.9-2+b1 libbz2-1.0_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-5+rpi1 libc6_2.31-5+rpi1 libc6-dev_2.31-5+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.0-19+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-4+rpi1 libctf0_2.35.1-4+rpi1 libcunit1_2.1-3-dfsg-2.3 libcunit1-dev_2.1-3-dfsg-2.3 libcurl4_7.72.0-1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.3 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-19+rpi1 libgcc-s1_10.2.0-19+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-19+rpi1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.0-19+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-4 libhdf5-103-1_1.10.6+repack-2 libhdf5-cpp-103-1_1.10.6+repack-2 libhdf5-dev_1.10.6+repack-2 libhdf5-fortran-102_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhdf5-hl-cpp-100_1.10.6+repack-2 libhdf5-hl-fortran-100_1.10.6+repack-2 libhogweed6_3.6-2 libicu67_67.1-5 libidn2-0_2.3.0-4 libisl23_0.23-1 libjpeg-dev_1:2.0.5-1.1 libjpeg62-turbo_1:2.0.5-1.1 libjpeg62-turbo-dev_1:2.0.5-1.1 libjsoncpp24_1.9.4-3 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libopenblas-dev_0.3.12+ds-2+rpi1 libopenblas-pthread-dev_0.3.12+ds-2+rpi1 libopenblas0_0.3.12+ds-2+rpi1 libopenblas0-pthread_0.3.12+ds-2+rpi1 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.35-2 libpcre3_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libreadline8_8.1~rc3-1 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 librust-rand-core-dev_0.5.1-1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsimde-dev_0.6.0-3 libsmartcols1_2.36.1-2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1 libssh2-1_1.9.0-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-4+rpi1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-19+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libuv1_1.40.0-1 libxapian30_1.4.17-1 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 procps_2:3.3.16-5 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-scrappie-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1+rpi1 tzdata_2020d-1 util-linux_2.36.1-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.TTXXTMlf/trustedkeys.kbx': General error
gpgv: Signature made Tue Dec 8 19:30:06 2020 UTC
gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
gpgv: issuer "npatra974@gmail.com"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./scrappie_1.4.2-4.dsc
dpkg-source: info: extracting scrappie in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking scrappie_1.4.2.orig.tar.gz
dpkg-source: info: unpacking scrappie_1.4.2-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying simde.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-39784b73-8bf0-48d6-9ba0-6e054bab1bb4
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package scrappie
dpkg-buildpackage: info: source version 1.4.2-4
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem=cmake
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
rm -Rf build_*
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=cmake
dh_clean -O--buildsystem=cmake
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/scrappie.substvars debian/files
rm -fr -- debian/scrappie/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch --buildsystem=cmake
dh_update_autotools_config -a -O--buildsystem=cmake
dh_autoreconf -a -O--buildsystem=cmake
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
install -d obj-arm-linux-gnueabihf
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ..
-- The C compiler identification is GNU 10.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Performing Test HAS_OPENMP
-- Performing Test HAS_OPENMP - Success
-- Looking for hdf5.h
-- Looking for hdf5.h - not found
-- Looking for hdf5/serial/hdf5.h
-- Looking for hdf5/serial/hdf5.h - found
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LIBDIR
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_RUNSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
rm -f debian/scrappie.debhelper.log
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/scrappie_objects.dir/build.make CMakeFiles/scrappie_objects.dir/depend
make -f CMakeFiles/test_interface.dir/build.make CMakeFiles/test_interface.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/test_interface.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/scrappie_objects.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/test_interface.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/test_interface.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/test_interface.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/scrappie_objects.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/scrappie_objects.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/scrappie_objects.dir/depend.internal".
Scanning dependencies of target test_interface
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/test_interface.dir/build.make CMakeFiles/test_interface.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 2%] Building C object CMakeFiles/test_interface.dir/src/test_interface.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o CMakeFiles/test_interface.dir/src/test_interface.c.o -c /<<PKGBUILDDIR>>/src/test_interface.c
Scanning dependencies of target scrappie_objects
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/scrappie_objects.dir/build.make CMakeFiles/scrappie_objects.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 7%] Building C object CMakeFiles/scrappie_objects.dir/src/decode.c.o
[ 7%] Building C object CMakeFiles/scrappie_objects.dir/src/event_detection.c.o
[ 10%] Building C object CMakeFiles/scrappie_objects.dir/src/layers.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/event_detection.c.o -c /<<PKGBUILDDIR>>/src/event_detection.c
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/decode.c.o -c /<<PKGBUILDDIR>>/src/decode.c
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/layers.c.o -c /<<PKGBUILDDIR>>/src/layers.c
[ 13%] Linking C executable test_interface
/usr/bin/cmake -E cmake_link_script CMakeFiles/test_interface.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_interface.dir/src/test_interface.c.o -o test_interface
[ 15%] Building C object CMakeFiles/scrappie_objects.dir/src/networks.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/networks.c.o -c /<<PKGBUILDDIR>>/src/networks.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target test_interface
[ 18%] Building C object CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -c /<<PKGBUILDDIR>>/src/nnfeatures.c
[ 21%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -c /<<PKGBUILDDIR>>/src/scrappie_common.c
[ 23%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -c /<<PKGBUILDDIR>>/src/scrappie_matrix.c
[ 26%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o
/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -o CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -c /<<PKGBUILDDIR>>/src/scrappie_seq_helpers.c
[ 28%] Building C object CMakeFiles/scrappie_objects.dir/src/util.c.o
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[ 31%] Building C object CMakeFiles/scrappie_objects.dir/src/homopolymer.c.o
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In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
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from /<<PKGBUILDDIR>>/src/test/test_scrappie_util.c:6:
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187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
[ 47%] Building C object CMakeFiles/scrappie.dir/src/scrappie_raw.c.o
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[ 50%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o
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In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from /<<PKGBUILDDIR>>/src/test/scrappie_util.c:4:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
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/<<PKGBUILDDIR>>/src/scrappie_event_table.c: In function 'main_event_table':
/<<PKGBUILDDIR>>/src/scrappie_event_table.c:155:42: warning: format '%zu' expects argument of type 'size_t', but argument 4 has type 'uint64_t' {aka 'long long unsigned int'} [-Wformat=]
155 | fprintf(args.output, "%zu\t%zu\t%f\t%f\t%d\n", i, ev.start, ev.mean, ev.stdv, (int)ev.length);
| ~~^ ~~~~~~~~
| | |
| unsigned int uint64_t {aka long long unsigned int}
| %llu
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/usr/bin/cc -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/include -I/usr/include/hdf5/serial -I/<<PKGBUILDDIR>>/src/test -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o CMakeFiles/scrappie_unittest.dir/src/test/test_util.c.o -c /<<PKGBUILDDIR>>/src/test/test_util.c
[ 97%] Linking C executable scrappie
/usr/bin/cmake -E cmake_link_script CMakeFiles/scrappie.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/scrappie.dir/src/scrappie.c.o CMakeFiles/scrappie.dir/src/scrappie_raw.c.o CMakeFiles/scrappie.dir/src/scrappie_events.c.o CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o CMakeFiles/scrappie.dir/src/scrappie_help.c.o CMakeFiles/scrappie.dir/src/fast5_interface.c.o CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -o scrappie libscrappie.a -lblas -lhdf5_serial -lm
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target scrappie
[100%] Linking C executable scrappie_unittest
/usr/bin/cmake -E cmake_link_script CMakeFiles/scrappie_unittest.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_matrix.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_signal.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_squiggle.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_util.c.o -o scrappie_unittest libscrappie.a -lblas -lhdf5_serial -lm -lcunit
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target scrappie_unittest
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
rm -f debian/scrappie.debhelper.log
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test
cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
Start 1: unittest
Start 2: test_events_call
Start 3: test_raw_call
Start 4: test_rawrgrgr_r94_call
1/19 Test #1: unittest ......................... Passed 155.82 sec
Start 5: test_rawrgrgr_r941_call
2/19 Test #2: test_events_call ................. Passed 2769.33 sec
Start 6: test_rawrgrgr_r10_call
3/19 Test #3: test_raw_call .................... Passed 4586.74 sec
Start 7: test_rawrnnrf_r94_call
4/19 Test #4: test_rawrgrgr_r94_call ........... Passed 5773.26 sec
Start 8: test_event_table
5/19 Test #8: test_event_table ................. Passed 1.22 sec
Start 9: test_mappy
6/19 Test #9: test_mappy ....................... Passed 6.66 sec
Start 10: test_seqmappy
7/19 Test #5: test_rawrgrgr_r941_call .......... Passed 6594.03 sec
Start 11: test_squiggle_r94
8/19 Test #11: test_squiggle_r94 ................ Passed 11.49 sec
Start 12: test_squiggle_r10
9/19 Test #12: test_squiggle_r10 ................ Passed 12.41 sec
Start 13: test_licence
10/19 Test #13: test_licence ..................... Passed 0.10 sec
Start 14: test_help
11/19 Test #14: test_help ........................ Passed 0.10 sec
Start 15: test_help_events
12/19 Test #15: test_help_events ................. Passed 0.12 sec
Start 16: test_help_event_table
13/19 Test #16: test_help_event_table ............ Passed 0.11 sec
Start 17: test_help_raw
14/19 Test #17: test_help_raw .................... Passed 0.14 sec
Start 18: test_help_squiggle
15/19 Test #18: test_help_squiggle ............... Passed 0.11 sec
Start 19: test_version
16/19 Test #19: test_version ..................... Passed 0.10 sec
17/19 Test #10: test_seqmappy .................... Passed 1314.57 sec
18/19 Test #6: test_rawrgrgr_r10_call ........... Passed 5065.51 sec
19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 3338.92 sec
100% tests passed, 0 tests failed out of 19
Total Test time (real) = 7925.68 sec
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
rm -fr -- /tmp/dh-xdg-rundir-u1qghgYD
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=cmake
dh_prep -a -O--buildsystem=cmake
rm -f -- debian/scrappie.substvars
rm -fr -- debian/.debhelper/generated/scrappie/ debian/scrappie/ debian/tmp/
rm -f debian/scrappie.debhelper.log
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
install -d /<<PKGBUILDDIR>>/debian/scrappie
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/scrappie/usr/bin/scrappie
-- Installing: /<<PKGBUILDDIR>>/debian/scrappie/usr/lib/libscrappie.a
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=cmake
install -d debian/scrappie/usr/share/doc/scrappie
install -d debian/.debhelper/generated/scrappie
install -p -m0644 debian/copyright debian/scrappie/usr/share/doc/scrappie/copyright
dh_installchangelogs -a -O--buildsystem=cmake
install -p -m0644 debian/changelog debian/scrappie/usr/share/doc/scrappie/changelog.Debian
dh_installman -a -O--buildsystem=cmake
install -d debian/scrappie/usr/share/man/man1/
install -p -m0644 ./debian/scrappie.1 debian/scrappie/usr/share/man/man1/scrappie.1
man-recode --to-code UTF-8 --suffix .dh-new debian/scrappie/usr/share/man/man1/scrappie.1
mv debian/scrappie/usr/share/man/man1/scrappie.1.dh-new debian/scrappie/usr/share/man/man1/scrappie.1
chmod 0644 -- debian/scrappie/usr/share/man/man1/scrappie.1
dh_installsystemduser -a -O--buildsystem=cmake
dh_lintian -a -O--buildsystem=cmake
install -d debian/scrappie/usr/share/lintian/overrides
install -p -m0644 debian/lintian-overrides debian/scrappie/usr/share/lintian/overrides/scrappie
dh_perl -a -O--buildsystem=cmake
dh_link -a -O--buildsystem=cmake
dh_strip_nondeterminism -a -O--buildsystem=cmake
dh_compress -a -O--buildsystem=cmake
cd debian/scrappie
chmod a-x usr/share/doc/scrappie/changelog.Debian usr/share/man/man1/scrappie.1
gzip -9nf usr/share/doc/scrappie/changelog.Debian usr/share/man/man1/scrappie.1
cd '/<<PKGBUILDDIR>>'
dh_fixperms -a -O--buildsystem=cmake
find debian/scrappie ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/scrappie/usr/share/doc -type f -a -true -a ! -regex 'debian/scrappie/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/scrappie/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/scrappie/usr/share/man debian/scrappie/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/scrappie -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/scrappie/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/scrappie/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a -O--buildsystem=cmake
dh_dwz -a -a -O--buildsystem=cmake
dwz -- debian/scrappie/usr/bin/scrappie
dh_strip -a -a -O--buildsystem=cmake
install -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/bc
objcopy --only-keep-debug --compress-debug-sections debian/scrappie/usr/bin/scrappie debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/bc/36daed79d1c1e2e6e297539eecee479a1717c9.debug
chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/bc/36daed79d1c1e2e6e297539eecee479a1717c9.debug
strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie
objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/bc/36daed79d1c1e2e6e297539eecee479a1717c9.debug debian/scrappie/usr/bin/scrappie
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/scrappie/usr/lib/libscrappie.a
install -d debian/.debhelper/scrappie/dbgsym-root/usr/share/doc
ln -s scrappie debian/.debhelper/scrappie/dbgsym-root/usr/share/doc/scrappie-dbgsym
dh_makeshlibs -a -a -O--buildsystem=cmake
rm -f debian/scrappie/DEBIAN/shlibs
dh_shlibdeps -a -a -O--buildsystem=cmake
install -d debian/scrappie/DEBIAN
dpkg-shlibdeps -Tdebian/scrappie.substvars debian/scrappie/usr/bin/scrappie
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/scrappie/usr/bin/scrappie was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a -O--buildsystem=cmake
rm -f debian/scrappie.debhelper.log
debian/rules override_dh_gencontrol
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.6.0-3), "
echo misc:Depends= >> debian/scrappie.substvars
echo misc:Pre-Depends= >> debian/scrappie.substvars
install -d debian/.debhelper/scrappie/dbgsym-root/DEBIAN
dpkg-gencontrol -pscrappie -ldebian/changelog -Tdebian/scrappie.substvars -Pdebian/.debhelper/scrappie/dbgsym-root "-Vsimde:Built-Using=simde (= 0.6.0-3), " -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=scrappie-dbgsym "-DDepends=scrappie (= \${binary:Version})" "-DDescription=debug symbols for scrappie" -DBuild-Ids=bc36daed79d1c1e2e6e297539eecee479a1717c9 -DSection=debug -UMulti-Arch -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/DEBIAN/control
dpkg-gencontrol -pscrappie -ldebian/changelog -Tdebian/scrappie.substvars -Pdebian/scrappie "-Vsimde:Built-Using=simde (= 0.6.0-3), "
chmod 0644 -- debian/scrappie/DEBIAN/control
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_md5sums -a -O--buildsystem=cmake
cd debian/scrappie >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/scrappie/DEBIAN/md5sums
cd debian/.debhelper/scrappie/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a -O--buildsystem=cmake
dpkg-deb --root-owner-group --build debian/scrappie ..
dpkg-deb --root-owner-group --build debian/.debhelper/scrappie/dbgsym-root ..
dpkg-deb: building package 'scrappie-dbgsym' in '../scrappie-dbgsym_1.4.2-4_armhf.deb'.
dpkg-deb: building package 'scrappie' in '../scrappie_1.4.2-4_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../scrappie_1.4.2-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-14T13:11:21Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
scrappie_1.4.2-4_armhf.changes:
-------------------------------
Format: 1.8
Date: Wed, 09 Dec 2020 00:42:25 +0530
Source: scrappie
Binary: scrappie scrappie-dbgsym
Architecture: armhf
Version: 1.4.2-4
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Nilesh Patra <npatra974@gmail.com>
Description:
scrappie - basecaller for Nanopore sequencer
Closes: 976479
Changes:
scrappie (1.4.2-4) unstable; urgency=medium
.
[ Nilesh Patra ]
* Remove useless test erroneously copied
* Add myself to uploaders
* Attempt using simde to compile across more arches
(Closes: #976479)
* Add libsimde-dev to build deps
* Attempt enabling simde-dispatch
* Add Built-Using as documented in SIMDe wiki, and policy
* Add override for lintian complaint
for binaries generated with simde flags
.
[ Michael R. Crusoe ]
* ignore the root Makefile, use cmake
Checksums-Sha1:
ee5f27c5fe460ada49f0f1389d08d2a146212fc4 193224 scrappie-dbgsym_1.4.2-4_armhf.deb
2850c28afd8616be94a23b6cd6ced71e67a090af 6504 scrappie_1.4.2-4_armhf.buildinfo
f9cf1b930a49b94113fedaa186758fc2e12bfccb 18334932 scrappie_1.4.2-4_armhf.deb
Checksums-Sha256:
2db4dadbfd6fc1cccdc8b11f4ed93ca19ff6f838e82f42f5e064a390ee4e7558 193224 scrappie-dbgsym_1.4.2-4_armhf.deb
ea0a0f0480196fa658c227d2eb800d45294e4c8b732a7b58450fb460d3b566de 6504 scrappie_1.4.2-4_armhf.buildinfo
917ff6418b47bd5fa08060709c96deaf1038c813b6b38b5222a1ef8d0de70a8c 18334932 scrappie_1.4.2-4_armhf.deb
Files:
d2599e802c9af8a7607e6135e4244976 193224 debug optional scrappie-dbgsym_1.4.2-4_armhf.deb
b8e6b081867c1fcd1cbed489d3b0ee98 6504 science optional scrappie_1.4.2-4_armhf.buildinfo
e71ad62b7655dc340201e460bb447f4e 18334932 science optional scrappie_1.4.2-4_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
scrappie-dbgsym_1.4.2-4_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 193224 bytes: control archive=536 bytes.
374 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: scrappie-dbgsym
Source: scrappie
Version: 1.4.2-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 226
Depends: scrappie (= 1.4.2-4)
Section: debug
Priority: optional
Description: debug symbols for scrappie
Build-Ids: bc36daed79d1c1e2e6e297539eecee479a1717c9
drwxr-xr-x root/root 0 2020-12-08 19:12 ./
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/lib/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/lib/debug/.build-id/bc/
-rw-r--r-- root/root 220728 2020-12-08 19:12 ./usr/lib/debug/.build-id/bc/36daed79d1c1e2e6e297539eecee479a1717c9.debug
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-12-08 19:12 ./usr/share/doc/scrappie-dbgsym -> scrappie
scrappie_1.4.2-4_armhf.deb
--------------------------
new Debian package, version 2.0.
size 18334932 bytes: control archive=976 bytes.
808 bytes, 18 lines control
389 bytes, 6 lines md5sums
Package: scrappie
Version: 1.4.2-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 22030
Depends: libblas3 | libblas.so.3, libc6 (>= 2.27), libgomp1 (>= 6), libhdf5-103-1
Built-Using: simde (= 0.6.0-3)
Section: science
Priority: optional
Homepage: https://github.com/nanoporetech/scrappie
Description: basecaller for Nanopore sequencer
The Nanopore is a device for DNA/RNA sequencing that does
not require an amplification of the material. The polynucleotides
are threaded through a pore and while these pass through,
the change in the electrostatic potential allows one to
identify ("call") the actual base that resides in the pore.
Scrappie goes a step further and also attempts to describe
modifications to the nucleic acid.
drwxr-xr-x root/root 0 2020-12-08 19:12 ./
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/bin/
-rwxr-xr-x root/root 11259592 2020-12-08 19:12 ./usr/bin/scrappie
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/lib/
-rw-r--r-- root/root 11264082 2020-12-08 19:12 ./usr/lib/libscrappie.a
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/doc/scrappie/
-rw-r--r-- root/root 637 2020-12-08 19:12 ./usr/share/doc/scrappie/changelog.Debian.gz
-rw-r--r-- root/root 18427 2020-12-07 07:53 ./usr/share/doc/scrappie/copyright
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/lintian/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 219 2020-12-08 19:07 ./usr/share/lintian/overrides/scrappie
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/man/
drwxr-xr-x root/root 0 2020-12-08 19:12 ./usr/share/man/man1/
-rw-r--r-- root/root 861 2020-12-08 19:12 ./usr/share/man/man1/scrappie.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 153628
Build-Time: 8159
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 435
Job: scrappie_1.4.2-4
Machine Architecture: armhf
Package: scrappie
Package-Time: 8656
Source-Version: 1.4.2-4
Space: 153628
Status: successful
Version: 1.4.2-4
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Finished at 2020-12-14T13:11:21Z
Build needed 02:24:16, 153628k disc space