Raspbian Package Auto-Building

r-cran-sctransform → 0.3-1 → armhf → 2020-09-27 06:17:40

sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on test2019

+==============================================================================+
| r-cran-sctransform 0.3-1 (armhf)             Sun, 27 Sep 2020 05:52:51 +0000 |
+==============================================================================+

Package: r-cran-sctransform
Version: 0.3-1
Source Version: 0.3-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-b6bc15ed-a0c2-4c6c-a6c8-bdb723eed92e' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
Fetched 24.3 MB in 20s (1217 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'r-cran-sctransform' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-sctransform.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-sctransform.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 126 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-cran-sctransform 0.3-1 (dsc) [2286 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-cran-sctransform 0.3-1 (tar) [121 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-cran-sctransform 0.3-1 (diff) [2592 B]
Fetched 126 kB in 0s (863 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-sctransform-Vd3t5q/r-cran-sctransform-0.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-sctransform-Vd3t5q' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-c0pqiL/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-c0pqiL/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-c0pqiL/gpg/trustdb.gpg: trustdb created
gpg: key E70254B6505CF8F7: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key E70254B6505CF8F7: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key E70254B6505CF8F7: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Packages [430 B]
Fetched 2106 B in 1s (3618 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-c0pqiL/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  bsdextrautils libpam-cap sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 34 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (36.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 13861 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-mass, r-cran-matrix, r-cran-future.apply, r-cran-future, r-cran-ggplot2, r-cran-reshape2, r-cran-gridextra, r-cran-rcpp, r-cran-rcppeigen
Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-mass, r-cran-matrix, r-cran-future.apply, r-cran-future, r-cran-ggplot2, r-cran-reshape2, r-cran-gridextra, r-cran-rcpp, r-cran-rcppeigen
dpkg-deb: building package 'sbuild-build-depends-r-cran-sctransform-dummy' in '/<<BUILDDIR>>/resolver-c0pqiL/apt_archive/sbuild-build-depends-r-cran-sctransform-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-sctransform-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Sources [569 B]
Get:5 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Packages [649 B]
Fetched 2551 B in 1s (4630 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-c0pqiL/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...

Install r-cran-sctransform build dependencies (apt-based resolver)
------------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  libpam-cap
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev ca-certificates cpp cpp-10
  dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
  fontconfig fontconfig-config fonts-dejavu-core g++ g++-10 gcc gcc-10
  gcc-10-base gettext gettext-base gfortran gfortran-10 groff-base
  icu-devtools intltool-debian libarchive-zip-perl libasan6 libatomic1
  libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2 libcc1-0
  libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgcc-10-dev libgcc-s1 libgfortran-10-dev
  libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2
  libharfbuzz0b libice6 libicu-dev libicu67 libjbig0 libjpeg-dev
  libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1
  libncurses-dev libncurses5-dev libncurses6 libncursesw6 libnghttp2-14
  libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
  libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
  libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
  libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev librtmp1
  libsigsegv2 libsm6 libssh2-1 libssl1.1 libstdc++-10-dev libstdc++6
  libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
  libtinfo6 libtk8.6 libtool libubsan1 libuchardet0 libwebp6 libx11-6
  libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
  libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db
  openssl pkg-config po-debconf r-base-core r-base-dev r-cran-assertthat
  r-cran-backports r-cran-callr r-cran-cli r-cran-codetools r-cran-colorspace
  r-cran-crayon r-cran-desc r-cran-digest r-cran-ellipsis r-cran-evaluate
  r-cran-fansi r-cran-farver r-cran-future r-cran-future.apply r-cran-ggplot2
  r-cran-globals r-cran-glue r-cran-gridextra r-cran-gtable r-cran-isoband
  r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-listenv
  r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv
  r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
  r-cran-pkgkitten r-cran-pkgload r-cran-plyr r-cran-praise r-cran-prettyunits
  r-cran-processx r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp
  r-cran-rcppeigen r-cran-reshape2 r-cran-rlang r-cran-rprojroot
  r-cran-rstudioapi r-cran-scales r-cran-stringi r-cran-stringr
  r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite
  r-cran-withr ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-10-locales debtags
  dh-make gcc-10-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
  gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-10-doc
  libcoarrays-dev groff liblapack-doc krb5-doc krb5-user icu-doc liblzma-doc
  ncurses-doc readline-doc libstdc++-10-doc tcl8.6 tk8.6 libtool-doc gcj-jdk
  m4-doc apparmor less www-browser libmail-box-perl elpa-ess r-doc-info
  | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
  texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
  texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
  r-cran-covr r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown
  r-cran-prettycode r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd
  r-cran-shiny r-cran-shinyjs r-cran-dplyr r-cran-png r-cran-jpeg
  r-cran-viridis r-cran-unitizer r-cran-markdown r-cran-hmisc r-cran-maps
  r-cran-maptools r-cran-multcomp r-cran-rpart r-cran-sf r-cran-svglite
  r-cran-dbi r-cran-rsqlite r-cran-r.utils r-cran-forcats r-cran-magick
  r-cran-getopt r-cran-bit64 r-cran-bitops r-cran-doparallel r-cran-foreach
  r-cran-iterators r-cran-itertools r-cran-curl r-cran-inline r-cran-mockr
  r-cran-dichromat r-cran-devtools r-cran-usethis r-cran-blob r-cran-hms
  r-cran-htmltools r-cran-purrr r-cran-tidyr r-cran-zeallot
Recommended packages:
  devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
  publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
  r-cran-cliapp r-cran-mockery r-cran-sp r-cran-mapproj r-cran-hexbin
  r-cran-vdiffr r-cran-quantreg r-cran-lubridate r-cran-domc r-cran-abind
  r-cran-curl r-cran-rmarkdown r-cran-bit64 r-cran-hms r-cran-htmltools
  r-cran-htmlwidgets r-cran-xml2 r-cran-data.table r-cran-rsqlite r-cran-knitr
  r-cran-dplyr r-cran-mockr r-cran-generics r-cran-waldo r-cran-dbi
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev ca-certificates dctrl-tools
  debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
  gfortran-10 groff-base icu-devtools intltool-debian libarchive-zip-perl
  libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3
  libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-10-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu67
  libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3
  libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev
  libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libncurses6
  libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0
  libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5
  libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev
  librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1 libsub-override-perl
  libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool
  libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0
  libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
  libxss1 libxt6 littler m4 man-db openssl pkg-config po-debconf r-base-core
  r-base-dev r-cran-assertthat r-cran-backports r-cran-callr r-cran-cli
  r-cran-codetools r-cran-colorspace r-cran-crayon r-cran-desc r-cran-digest
  r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-future
  r-cran-future.apply r-cran-ggplot2 r-cran-globals r-cran-glue
  r-cran-gridextra r-cran-gtable r-cran-isoband r-cran-labeling r-cran-lattice
  r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-magrittr r-cran-mass
  r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar
  r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plyr
  r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-r6
  r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-reshape2
  r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-stringi
  r-cran-stringr r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs
  r-cran-viridislite r-cran-withr
  sbuild-build-depends-r-cran-sctransform-dummy ucf unzip x11-common xauth
  xdg-utils zip zlib1g-dev
The following packages will be upgraded:
  cpp cpp-10 g++ g++-10 gcc gcc-10 gcc-10-base libasan6 libatomic1 libcc1-0
  libgcc-10-dev libgcc-s1 libgomp1 libncursesw6 libstdc++-10-dev libstdc++6
  libtinfo6 libubsan1
18 upgraded, 189 newly installed, 0 to remove and 16 not upgraded.
Need to get 148 MB/149 MB of archives.
After this operation, 317 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-c0pqiL/apt_archive ./ sbuild-build-depends-r-cran-sctransform-dummy 0.invalid.0 [936 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.2.0-9+rpi1 [31.7 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.2.0-9+rpi1 [199 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.2.0-9+rpi1 [36.1 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.2.0-9+rpi1 [84.1 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.2.0-9+rpi1 [8180 B]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libasan6 armhf 10.2.0-9+rpi1 [300 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.2.0-9+rpi1 [115 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf g++-10 armhf 10.2.0-9+rpi1 [6793 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-10-dev armhf 10.2.0-9+rpi1 [1746 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libgcc-10-dev armhf 10.2.0-9+rpi1 [683 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf gcc-10 armhf 10.2.0-9+rpi1 [12.3 MB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf cpp-10 armhf 10.2.0-9+rpi1 [6247 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.2.0-9+rpi1 [408 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libtinfo6 armhf 6.2+20200918-1 [327 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libncursesw6 armhf 6.2+20200918-1 [105 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf g++ armhf 4:10.2.0-1 [1624 B]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf gcc armhf 4:10.2.0-1 [5196 B]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf cpp armhf 4:10.2.0-1 [19.7 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2.1 [188 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.181-1 [161 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.0-2 [1173 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6 [578 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2 [259 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.2+dfsg-3 [347 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.12-1 [311 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.12-1 [700 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-10+b3 [62.0 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-10+b3 [112 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-10+b3 [318 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-10+b3 [135 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.41.0-3 [63.0 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.72.0-1 [300 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-9+rpi1 [232 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.7-1 [1366 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b3 [36.4 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.46.1-1 [171 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.46.1-1 [54.8 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.46.1-1 [45.9 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.2.0-1 [159 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.2-1 [24.7 MB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-10-dev armhf 10.2.0-9+rpi1 [277 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf gfortran-10 armhf 10.2.0-9+rpi1 [6603 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:10.2.0-1 [1428 B]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-3 [113 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-3 [2980 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20200918-1 [79.5 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2+20200918-1 [290 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2+20200918-1 [940 B]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-4 [116 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:2.0.5-1.1 [241 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:2.0.5-1.1 [66.0 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-13 [235 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-13 [228 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-13 [150 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-13 [566 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-3 [277 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-4 [172 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-4 [9248 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.2-1 [4484 B]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20200911 [39.5 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.11-1 [310 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.11-1 [15.1 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf r-cran-assertthat all 0.2.1-2 [56.5 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf r-cran-backports armhf 1.1.10-1 [81.8 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ps armhf 1.3.4-1 [220 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r6 all 2.4.1-2 [79.2 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf r-cran-processx armhf 3.4.4-1 [292 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf r-cran-callr all 3.4.4-1 [378 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-5 [750 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf r-cran-glue armhf 1.4.2-1 [139 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fansi armhf 0.4.1-1+b1 [337 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cli all 2.0.2-2 [392 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf r-cran-codetools all 0.2-16-2 [91.0 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf r-cran-colorspace armhf 1.4-1+dfsg-2 [1636 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rprojroot all 1.3-2-3 [97.5 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf r-cran-desc all 1.2.0-3 [301 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf r-cran-digest armhf 0.6.25-1+b1 [177 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rlang armhf 0.4.7-1 [1138 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ellipsis armhf 0.3.1-1 [31.5 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf r-cran-evaluate all 0.14-2 [81.1 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf r-cran-farver armhf 2.0.3-1+b1 [1381 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf r-cran-globals all 0.13.0-1 [93.5 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf r-cran-listenv all 0.8.0+dfsg-1 [105 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf r-cran-future all 1.18.0+dfsg-1 [661 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf r-cran-future.apply all 1.6.0-1 [144 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtable all 0.3.0+dfsg-2 [163 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf r-cran-magrittr all 1.5-6 [154 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf r-cran-prettyunits all 1.1.1-2 [39.1 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf r-cran-withr all 2.2.0-2 [209 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgbuild all 1.1.0-1 [144 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rstudioapi all 0.11-2 [249 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgload armhf 1.1.0-1 [170 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf r-cran-praise all 1.0.0-4 [20.1 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf r-cran-testthat armhf 2.3.2-2 [1038 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf r-cran-isoband armhf 0.2.2-1 [2437 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mass armhf 7.3-51.6-1+b1 [1114 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lattice armhf 0.20-41-1+b1 [1167 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf r-cran-nlme armhf 3.1.149-1 [2256 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrix armhf 1.2-18-1+b1 [3451 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mgcv armhf 1.8-33-1 [2958 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf r-cran-labeling all 0.3-4 [62.2 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lifecycle all 0.2.0-2 [93.2 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf r-cran-munsell all 0.5.0-2 [236 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf r-cran-viridislite all 0.3.0-4 [59.2 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf r-cran-scales all 1.1.1-1 [557 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf r-cran-utf8 armhf 1.1.4-2 [128 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vctrs armhf 0.3.4-1 [1060 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pillar all 1.4.6-1 [227 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tibble armhf 3.0.3-2 [430 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ggplot2 all 3.3.2+dfsg-2 [3146 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gridextra all 2.3-3 [1024 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.1.5-2 [23.7 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.5-1 [2009 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plyr armhf 1.8.6-2 [830 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcppeigen armhf 0.3.3.7.0-1+b1 [1339 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringi armhf 1.5.3-1 [706 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringr all 1.4.0-2 [199 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf r-cran-reshape2 armhf 1.4.4-2 [110 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 148 MB in 45s (3320 kB/s)
(Reading database ... 13861 files and directories currently installed.)
Preparing to unpack .../libcc1-0_10.2.0-9+rpi1_armhf.deb ...
Unpacking libcc1-0:armhf (10.2.0-9+rpi1) over (10.2.0-5+rpi1) ...
Preparing to unpack .../gcc-10-base_10.2.0-9+rpi1_armhf.deb ...
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Setting up liblapack3:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2+20200918-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libpcre3-dev:armhf (2:8.39-13) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libgcc-10-dev:armhf (10.2.0-9+rpi1) ...
Setting up libpng-dev:armhf (1.6.37-3) ...
Setting up libjpeg-dev (1:2.0.5-1.1) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libreadline-dev:armhf (8.0-4) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libfreetype6:armhf (2.10.2+dfsg-3) ...
Setting up liblapack-dev:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-10+b3) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up gcc-10 (10.2.0-9+rpi1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up cpp (4:10.2.0-1) ...
Setting up libncurses5-dev:armhf (6.2+20200918-1) ...
Setting up libcurl4:armhf (7.72.0-1) ...
Setting up libx11-6:armhf (2:1.6.12-1) ...
Setting up libharfbuzz0b:armhf (2.6.7-1) ...
Setting up libgfortran-10-dev:armhf (10.2.0-9+rpi1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up gettext (0.19.8.1-10) ...
Setting up libstdc++-10-dev:armhf (10.2.0-9+rpi1) ...
Setting up g++-10 (10.2.0-9+rpi1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libtool (2.4.6-14) ...
Setting up libpango-1.0-0:armhf (1.46.1-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up gcc (4:10.2.0-1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up gfortran-10 (10.2.0-9+rpi1) ...
Setting up libxt6:armhf (1:1.2.0-1) ...
Setting up g++ (4:10.2.0-1) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libpangoft2-1.0-0:armhf (1.46.1-1) ...
Setting up libpangocairo-1.0-0:armhf (1.46.1-1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up gfortran (4:10.2.0-1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up r-base-core (4.0.2-1) ...

Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.3.4-5) ...
Setting up r-cran-gtable (0.3.0+dfsg-2) ...
Setting up r-cran-labeling (0.3-4) ...
Setting up r-cran-lattice (0.20-41-1+b1) ...
Setting up r-cran-ps (1.3.4-1) ...
Setting up r-cran-nlme (3.1.149-1) ...
Setting up r-cran-farver (2.0.3-1+b1) ...
Setting up r-cran-viridislite (0.3.0-4) ...
Setting up r-cran-r6 (2.4.1-2) ...
Setting up r-cran-pkgkitten (0.1.5-2) ...
Setting up r-cran-magrittr (1.5-6) ...
Setting up r-cran-littler (0.3.11-1) ...
Setting up r-cran-rcpp (1.0.5-1) ...
Setting up r-cran-codetools (0.2-16-2) ...
Setting up r-cran-rlang (0.4.7-1) ...
Setting up r-base-dev (4.0.2-1) ...
Setting up r-cran-listenv (0.8.0+dfsg-1) ...
Setting up r-cran-assertthat (0.2.1-2) ...
Setting up littler (0.3.11-1) ...
Setting up r-cran-withr (2.2.0-2) ...
Setting up r-cran-backports (1.1.10-1) ...
Setting up r-cran-processx (3.4.4-1) ...
Setting up r-cran-praise (1.0.0-4) ...
Setting up r-cran-digest (0.6.25-1+b1) ...
Setting up r-cran-evaluate (0.14-2) ...
Setting up r-cran-prettyunits (1.1.1-2) ...
Setting up r-cran-fansi (0.4.1-1+b1) ...
Setting up r-cran-mass (7.3-51.6-1+b1) ...
Setting up r-cran-glue (1.4.2-1) ...
Setting up r-cran-cli (2.0.2-2) ...
Setting up r-cran-lifecycle (0.2.0-2) ...
Setting up r-cran-rprojroot (1.3-2-3) ...
Setting up r-cran-rstudioapi (0.11-2) ...
Setting up r-cran-pkgconfig (2.0.3-2) ...
Setting up r-cran-utf8 (1.1.4-2) ...
Setting up r-cran-colorspace (1.4-1+dfsg-2) ...
Setting up r-cran-stringi (1.5.3-1) ...
Setting up r-cran-plyr (1.8.6-2) ...
Setting up r-cran-rcolorbrewer (1.1-2-3) ...
Setting up r-cran-gridextra (2.3-3) ...
Setting up r-cran-matrix (1.2-18-1+b1) ...
Setting up r-cran-mgcv (1.8-33-1) ...
Setting up r-cran-globals (0.13.0-1) ...
Setting up r-cran-rcppeigen (0.3.3.7.0-1+b1) ...
Setting up r-cran-ellipsis (0.3.1-1) ...
Setting up r-cran-stringr (1.4.0-2) ...
Setting up r-cran-callr (3.4.4-1) ...
Setting up r-cran-desc (1.2.0-3) ...
Setting up r-cran-munsell (0.5.0-2) ...
Setting up r-cran-future (1.18.0+dfsg-1) ...
Setting up r-cran-reshape2 (1.4.4-2) ...
Setting up r-cran-future.apply (1.6.0-1) ...
Setting up r-cran-scales (1.1.1-1) ...
Setting up r-cran-pkgbuild (1.1.0-1) ...
Setting up r-cran-vctrs (0.3.4-1) ...
Setting up r-cran-pillar (1.4.6-1) ...
Setting up r-cran-pkgload (1.1.0-1) ...
Setting up r-cran-tibble (3.0.3-2) ...
Setting up r-cran-testthat (2.3.2-2) ...
Setting up r-cran-isoband (0.2.2-1) ...
Setting up r-cran-ggplot2 (3.3.2+dfsg-2) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.2.1) ...
Setting up dh-r (20200911) ...
Setting up sbuild-build-depends-r-cran-sctransform-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-3+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.20-v7+ armhf (armv7l)
Toolchain package versions: binutils_2.35-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-9+rpi1 gcc-10_10.2.0-9+rpi1 libc6-dev_2.31-3+rpi1 libstdc++-10-dev_10.2.0-9+rpi1 libstdc++6_10.2.0-9+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.10 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-7 binutils_2.35-2+rpi1 binutils-arm-linux-gnueabihf_2.35-2+rpi1 binutils-common_2.35-2+rpi1 bsdextrautils_2.36-3 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 coreutils_8.30-3 cpp_4:10.2.0-1 cpp-10_10.2.0-9+rpi1 dash_0.5.10.2-7 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.2.1 debianutils_4.9.1 dh-autoreconf_19 dh-r_20200911 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.36-3 file_1:5.38-5 findutils_4.7.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:10.2.0-1 g++-10_10.2.0-9+rpi1 gcc_4:10.2.0-1 gcc-10_10.2.0-9+rpi1 gcc-10-base_10.2.0-9+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:10.2.0-1 gfortran-10_10.2.0-9+rpi1 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_67.1-4 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 libacl1_2.2.53-8 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libasan6_10.2.0-9+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-9+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.35-2+rpi1 libblas-dev_3.9.0-3 libblas3_3.9.0-3 libblkid1_2.36-3 libboost-iostreams1.71.0_1.71.0-6+b1 libbrotli1_1.0.9-2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-3+rpi1 libc-dev-bin_2.31-3+rpi1 libc6_2.31-3+rpi1 libc6-dev_2.31-3+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.2 libcap2_1:2.43-1 libcap2-bin_1:2.43-1 libcc1-0_10.2.0-9+rpi1 libcom-err2_1.45.6-1 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libjbig0_2.1-3.1+b2 libjpeg-dev_1:2.0.5-1.1 libjpeg62-turbo_1:2.0.5-1.1 libjpeg62-turbo-dev_1:2.0.5-1.1 libk5crypto3_1.17-10+b3 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10+b3 libkrb5support0_1.17-10+b3 libksba8_1.4.0-2 liblapack-dev_3.9.0-3 liblapack3_3.9.0-3 libldap-2.4-2_2.4.51+dfsg-1 libldap-common_2.4.51+dfsg-1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3 libmpc3_1.2.0~rc1-1 libmpfr6_4.1.0-3 libncurses-dev_6.2+20200918-1 libncurses5-dev_6.2+20200918-1 libncurses6_6.2+20200918-1 libncursesw6_6.2+20200918-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libnpth0_1.6-2 libp11-kit0_0.23.21-2 libpam-cap_1:2.43-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.46.1-1 libpangocairo-1.0-0_1.46.1-1 libpangoft2-1.0-0_1.46.1-1 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-13 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-13 libpcre3-dev_2:8.39-13 libpcre32-3_2:8.39-13 libpcrecpp0v5_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-3 libpng16-16_1.6.37-3 libpsl5_0.21.0-1.1 libreadline-dev_8.0-4 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.2-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.36-3 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-10-dev_10.2.0-9+rpi1 libstdc++6_10.2.0-9+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_246.2-1+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo6_6.2+20200918-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libubsan1_10.2.0-9+rpi1 libuchardet0_0.0.7-1 libudev1_246.2-1+rpi1 libunistring2_0.9.10-4 libuuid1_2.36-3 libwebp6_0.6.1-2 libx11-6_2:1.6.12-1 libx11-data_2:1.6.12-1 libxapian30_1.4.17-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-6 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.2.0-1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 littler_0.3.11-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.2-1 r-base-dev_4.0.2-1 r-cran-assertthat_0.2.1-2 r-cran-backports_1.1.10-1 r-cran-callr_3.4.4-1 r-cran-cli_2.0.2-2 r-cran-codetools_0.2-16-2 r-cran-colorspace_1.4-1+dfsg-2 r-cran-crayon_1.3.4-5 r-cran-desc_1.2.0-3 r-cran-digest_0.6.25-1+b1 r-cran-ellipsis_0.3.1-1 r-cran-evaluate_0.14-2 r-cran-fansi_0.4.1-1+b1 r-cran-farver_2.0.3-1+b1 r-cran-future_1.18.0+dfsg-1 r-cran-future.apply_1.6.0-1 r-cran-ggplot2_3.3.2+dfsg-2 r-cran-globals_0.13.0-1 r-cran-glue_1.4.2-1 r-cran-gridextra_2.3-3 r-cran-gtable_0.3.0+dfsg-2 r-cran-isoband_0.2.2-1 r-cran-labeling_0.3-4 r-cran-lattice_0.20-41-1+b1 r-cran-lifecycle_0.2.0-2 r-cran-listenv_0.8.0+dfsg-1 r-cran-littler_0.3.11-1 r-cran-magrittr_1.5-6 r-cran-mass_7.3-51.6-1+b1 r-cran-matrix_1.2-18-1+b1 r-cran-mgcv_1.8-33-1 r-cran-munsell_0.5.0-2 r-cran-nlme_3.1.149-1 r-cran-pillar_1.4.6-1 r-cran-pkgbuild_1.1.0-1 r-cran-pkgconfig_2.0.3-2 r-cran-pkgkitten_0.1.5-2 r-cran-pkgload_1.1.0-1 r-cran-plyr_1.8.6-2 r-cran-praise_1.0.0-4 r-cran-prettyunits_1.1.1-2 r-cran-processx_3.4.4-1 r-cran-ps_1.3.4-1 r-cran-r6_2.4.1-2 r-cran-rcolorbrewer_1.1-2-3 r-cran-rcpp_1.0.5-1 r-cran-rcppeigen_0.3.3.7.0-1+b1 r-cran-reshape2_1.4.4-2 r-cran-rlang_0.4.7-1 r-cran-rprojroot_1.3-2-3 r-cran-rstudioapi_0.11-2 r-cran-scales_1.1.1-1 r-cran-stringi_1.5.3-1 r-cran-stringr_1.4.0-2 r-cran-testthat_2.3.2-2 r-cran-tibble_3.0.3-2 r-cran-utf8_1.1.4-2 r-cran-vctrs_0.3.4-1 r-cran-viridislite_0.3.0-4 r-cran-withr_2.2.0-2 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-sctransform-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-4 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 unzip_6.0-25 util-linux_2.36-3 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.O7Sc94kY/trustedkeys.kbx': General error
gpgv: Signature made Fri Sep 25 09:44:10 2020 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-sctransform_0.3-1.dsc
dpkg-source: info: extracting r-cran-sctransform in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-sctransform_0.3.orig.tar.gz
dpkg-source: info: unpacking r-cran-sctransform_0.3-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/build/buildd
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=116
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-b6bc15ed-a0c2-4c6c-a6c8-bdb723eed92e
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_ID=c202788

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-cran-sctransform
dpkg-buildpackage: info: source version 0.3-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --buildsystem R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules binary-arch
dh binary-arch --buildsystem R
   dh_update_autotools_config -a -O--buildsystem=R
   dh_autoreconf -a -O--buildsystem=R
   dh_auto_configure -a -O--buildsystem=R
   dh_auto_build -a -O--buildsystem=R
   dh_auto_test -a -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=R
   dh_prep -a -O--buildsystem=R
   dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: testthat
I: R Package: sctransform Version: 0.3
I: Building using R version 4.0.2-1
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 25 Sep 2020 11:37:01 +0200
	mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-sctransform/usr/lib/R/site-library
	R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-sctransform/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 25 Sep 2020 11:37:01 +0200'"
* installing *source* package 'sctransform' ...
** package 'sctransform' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-nKXijO/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-nKXijO/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c utils.cpp -o utils.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-z,relro -o sctransform.so RcppExports.o utils.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-sctransform/usr/lib/R/site-library/00LOCK-r-cran-sctransform-0.3/00new/sctransform/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sctransform)
	rm -f /<<PKGBUILDDIR>>/debian/r-cran-sctransform/usr/lib/R/site-library/sctransform/LICENSE
W: Ignoring specified R dependency: R (>= 3.0.2)
I: Using r-cran-testthat for Recommends:testthat
I: Using r-cran-irlba for Suggests:irlba
I: Using r-cran-knitr for Suggests:knitr
I: Using r-cran-mass for Imports:MASS
I: Using r-cran-matrix for Imports:Matrix
I: Using r-cran-future.apply for Imports:future.apply
I: Using r-cran-future for Imports:future
I: Using r-cran-ggplot2 for Imports:ggplot2
I: Using r-cran-reshape2 for Imports:reshape2
I: Using r-cran-gridextra for Imports:gridExtra
I: Using r-cran-rcpp for LinkingTo:Rcpp (>= 0.11.0)
I: Using r-cran-rcppeigen for LinkingTo:RcppEigen
I: Use r-cran-sctransform as Debian binary package for variables substitution
   dh_installdocs -a -O--buildsystem=R
   dh_installchangelogs -a -O--buildsystem=R
   dh_installsystemduser -a -O--buildsystem=R
   dh_perl -a -O--buildsystem=R
   dh_link -a -O--buildsystem=R
   dh_strip_nondeterminism -a -O--buildsystem=R
   dh_compress -a -O--buildsystem=R
   dh_fixperms -a -O--buildsystem=R
   dh_missing -a -O--buildsystem=R
   dh_dwz -a -a -O--buildsystem=R
   dh_strip -a -a -O--buildsystem=R
   dh_makeshlibs -a -a -O--buildsystem=R
   dh_shlibdeps -a -a -O--buildsystem=R
   dh_installdeb -a -O--buildsystem=R
   dh_gencontrol -a -O--buildsystem=R
   dh_md5sums -a -O--buildsystem=R
   dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-sctransform' in '../r-cran-sctransform_0.3-1_armhf.deb'.
dpkg-deb: building package 'r-cran-sctransform-dbgsym' in '../r-cran-sctransform-dbgsym_0.3-1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian 2019 test autobuilder <root@raspbian.org> >../r-cran-sctransform_0.3-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-09-27T06:16:57Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


r-cran-sctransform_0.3-1_armhf.changes:
---------------------------------------

Format: 1.8
Date: Fri, 25 Sep 2020 11:37:01 +0200
Source: r-cran-sctransform
Binary: r-cran-sctransform r-cran-sctransform-dbgsym
Architecture: armhf
Version: 0.3-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian 2019 test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 r-cran-sctransform - Variance Stabilizing Transformations for Single Cell UMI Data
Changes:
 r-cran-sctransform (0.3-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version
   * Standards-Version: 4.5.0 (routine-update)
   * debhelper-compat 13 (routine-update)
   * Add salsa-ci file (routine-update)
   * Rules-Requires-Root: no (routine-update)
   * Set upstream metadata fields: Repository.
   * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
     present in machine-readable debian/copyright).
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Files:
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 8bc8ae6b3c993aa9e448414835760b6f 9458 gnu-r optional r-cran-sctransform_0.3-1_armhf.buildinfo
 2979313c19be1a5977c9dbdd0e910844 333060 gnu-r optional r-cran-sctransform_0.3-1_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: r-cran-sctransform
Binary: r-cran-sctransform r-cran-sctransform-dbgsym
Architecture: armhf
Version: 0.3-1
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Sun, 27 Sep 2020 06:16:55 +0000
Build-Path: /<<PKGBUILDDIR>>
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 r-cran-littler (= 0.3.11-1),
 r-cran-magrittr (= 1.5-6),
 r-cran-mass (= 7.3-51.6-1+b1),
 r-cran-matrix (= 1.2-18-1+b1),
 r-cran-mgcv (= 1.8-33-1),
 r-cran-munsell (= 0.5.0-2),
 r-cran-nlme (= 3.1.149-1),
 r-cran-pillar (= 1.4.6-1),
 r-cran-pkgbuild (= 1.1.0-1),
 r-cran-pkgconfig (= 2.0.3-2),
 r-cran-pkgkitten (= 0.1.5-2),
 r-cran-pkgload (= 1.1.0-1),
 r-cran-plyr (= 1.8.6-2),
 r-cran-praise (= 1.0.0-4),
 r-cran-prettyunits (= 1.1.1-2),
 r-cran-processx (= 3.4.4-1),
 r-cran-ps (= 1.3.4-1),
 r-cran-r6 (= 2.4.1-2),
 r-cran-rcolorbrewer (= 1.1-2-3),
 r-cran-rcpp (= 1.0.5-1),
 r-cran-rcppeigen (= 0.3.3.7.0-1+b1),
 r-cran-reshape2 (= 1.4.4-2),
 r-cran-rlang (= 0.4.7-1),
 r-cran-rprojroot (= 1.3-2-3),
 r-cran-rstudioapi (= 0.11-2),
 r-cran-scales (= 1.1.1-1),
 r-cran-stringi (= 1.5.3-1),
 r-cran-stringr (= 1.4.0-2),
 r-cran-testthat (= 2.3.2-2),
 r-cran-tibble (= 3.0.3-2),
 r-cran-utf8 (= 1.1.4-2),
 r-cran-vctrs (= 0.3.4-1),
 r-cran-viridislite (= 0.3.0-4),
 r-cran-withr (= 2.2.0-2),
 readline-common (= 8.0-4),
 sed (= 4.7-1),
 sensible-utils (= 0.0.12+nmu1),
 sysvinit-utils (= 2.96-4),
 tar (= 1.30+dfsg-7),
 tzdata (= 2020a-1),
 ucf (= 3.0043),
 unzip (= 6.0-25),
 util-linux (= 2.36-3),
 x11-common (= 1:7.7+20),
 xauth (= 1:1.0.10-1),
 xdg-utils (= 1.1.3-2),
 xz-utils (= 5.2.4-1),
 zip (= 3.0-11),
 zlib1g (= 1:1.2.11.dfsg-2),
 zlib1g-dev (= 1:1.2.11.dfsg-2)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LC_ALL="POSIX"
 SOURCE_DATE_EPOCH="1601026621"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


r-cran-sctransform-dbgsym_0.3-1_armhf.deb
-----------------------------------------

 new Debian package, version 2.0.
 size 596500 bytes: control archive=540 bytes.
     404 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: r-cran-sctransform-dbgsym
 Source: r-cran-sctransform
 Version: 0.3-1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 614
 Depends: r-cran-sctransform (= 0.3-1)
 Section: debug
 Priority: optional
 Description: debug symbols for r-cran-sctransform
 Build-Ids: cf5586c0667288fc21008985c130d4e825593b3c

drwxr-xr-x root/root         0 2020-09-25 09:37 ./
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/debug/.build-id/cf/
-rw-r--r-- root/root    617980 2020-09-25 09:37 ./usr/lib/debug/.build-id/cf/5586c0667288fc21008985c130d4e825593b3c.debug
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-09-25 09:37 ./usr/share/doc/r-cran-sctransform-dbgsym -> r-cran-sctransform


r-cran-sctransform_0.3-1_armhf.deb
----------------------------------

 new Debian package, version 2.0.
 size 333060 bytes: control archive=1856 bytes.
    1049 bytes,    18 lines      control              
    3006 bytes,    35 lines      md5sums              
 Package: r-cran-sctransform
 Version: 0.3-1
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 424
 Depends: r-base-core (>= 4.0.2-1), r-api-4.0, r-cran-mass, r-cran-matrix, r-cran-future.apply, r-cran-future, r-cran-ggplot2, r-cran-reshape2, r-cran-gridextra, r-cran-rcpp (>= 0.11.0), r-cran-rcppeigen, libc6 (>= 2.29), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2)
 Recommends: r-cran-testthat
 Suggests: r-cran-irlba, r-cran-knitr
 Section: gnu-r
 Priority: optional
 Homepage: https://cran.r-project.org/package=sctransform
 Description: Variance Stabilizing Transformations for Single Cell UMI Data
  A normalization method for single-cell UMI count data using a
  variance stabilizing transformation. The transformation is based on a
  negative binomial regression model with regularized parameters. As part of the
  same regression framework, this package also provides functions for
  batch correction, and data correction. See Hafemeister and Satija 2019
  <doi:10.1101/576827> for more details.

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drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/
-rw-r--r-- root/root       693 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/CITATION
-rw-r--r-- root/root      1482 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/DESCRIPTION
-rw-r--r-- root/root      1512 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/INDEX
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/Meta/
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-rw-r--r-- root/root       944 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/Meta/hsearch.rds
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-rw-r--r-- root/root      1388 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/Meta/package.rds
-rw-r--r-- root/root      1223 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/NAMESPACE
-rw-r--r-- root/root      1826 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/NEWS.md
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/R/
-rw-r--r-- root/root      1056 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/R/sctransform
-rw-r--r-- root/root    102724 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/R/sctransform.rdb
-rw-r--r-- root/root       986 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/R/sctransform.rdx
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/data/
-rw-r--r-- root/root    151744 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/data/Rdata.rdb
-rw-r--r-- root/root        86 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/data/Rdata.rds
-rw-r--r-- root/root       157 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/data/Rdata.rdx
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/help/
-rw-r--r-- root/root       488 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/help/AnIndex
-rw-r--r-- root/root       259 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/help/aliases.rds
-rw-r--r-- root/root       331 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/help/paths.rds
-rw-r--r-- root/root     36148 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/help/sctransform.rdb
-rw-r--r-- root/root       599 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/help/sctransform.rdx
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/html/
-rw-r--r-- root/root      3605 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/html/00Index.html
-rw-r--r-- root/root      1335 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/html/R.css
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/libs/
-rw-r--r-- root/root     80128 2020-09-25 09:37 ./usr/lib/R/site-library/sctransform/libs/sctransform.so
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/share/doc/r-cran-sctransform/
-rw-r--r-- root/root       494 2020-09-25 09:37 ./usr/share/doc/r-cran-sctransform/changelog.Debian.gz
-rw-r--r-- root/root       988 2020-09-25 09:37 ./usr/share/doc/r-cran-sctransform/copyright
-rw-r--r-- root/root       416 2020-09-25 09:37 ./usr/share/doc/r-cran-sctransform/run-unit-test
drwxr-xr-x root/root         0 2018-07-23 09:30 ./usr/share/doc/r-cran-sctransform/tests/
-rw-r--r-- root/root        66 2018-07-23 09:30 ./usr/share/doc/r-cran-sctransform/tests/testthat.R
drwxr-xr-x root/root         0 2020-09-25 09:37 ./usr/share/doc/r-cran-sctransform/tests/testthat/
-rw-r--r-- root/root       779 2020-09-10 07:49 ./usr/share/doc/r-cran-sctransform/tests/testthat/test_denoising.R
-rw-r--r-- root/root       900 2019-04-10 20:05 ./usr/share/doc/r-cran-sctransform/tests/testthat/test_differential_expression.R
-rw-r--r-- root/root       546 2020-09-10 07:50 ./usr/share/doc/r-cran-sctransform/tests/testthat/test_generate.R
-rw-r--r-- root/root       733 2020-05-13 11:24 ./usr/share/doc/r-cran-sctransform/tests/testthat/test_utils.R
-rw-r--r-- root/root       545 2019-12-17 13:36 ./usr/share/doc/r-cran-sctransform/tests/testthat/test_vst.R


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 2488
Build-Time: 133
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1253
Job: r-cran-sctransform_0.3-1
Machine Architecture: armhf
Package: r-cran-sctransform
Package-Time: 1446
Source-Version: 0.3-1
Space: 2488
Status: successful
Version: 0.3-1
--------------------------------------------------------------------------------
Finished at 2020-09-27T06:16:57Z
Build needed 00:24:06, 2488k disk space

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