r-cran-rms →
5.1-0-1 →
armhf → 2017-01-26 10:45:41
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| r-cran-rms 5.1-0-1 (armhf) Thu, 26 Jan 2017 10:30:30 +0000 |
+==============================================================================+
Package: r-cran-rms
Version: 5.1-0-1
Source Version: 5.1-0-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-d13cb25d-f546-4806-bd1e-2b7e18531c06' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9731 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.7 MB]
Fetched 21.4 MB in 26s (819 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
Need to get 526 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main r-cran-rms 5.1-0-1 (dsc) [1950 B]
Get:2 http://172.17.0.1/private stretch-staging/main r-cran-rms 5.1-0-1 (tar) [520 kB]
Get:3 http://172.17.0.1/private stretch-staging/main r-cran-rms 5.1-0-1 (diff) [3918 B]
Fetched 526 kB in 0s (1854 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-rms-tpznT4/r-cran-rms-5.1-0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-rms-tpznT4' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-puBZsS/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-puBZsS/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-puBZsS/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (3414 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n kbd libfuse2 manpages netbase psmisc
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 63 not upgraded.
Need to get 776 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [776 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 776 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 13244 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 7.0.0), r-base-dev (>= 3.3.2), cdbs, r-cran-hmisc (>= 4.0-0), r-cran-survival (>= 2.40), r-cran-sparsem, r-cran-quantreg, r-cran-nlme, r-cran-rpart, r-cran-foreign, r-cran-nnet, r-cran-polspline, r-cran-multcomp, r-cran-ggplot2, r-cran-htmltable, r-cran-htmltools
Filtered Build-Depends: debhelper (>= 7.0.0), r-base-dev (>= 3.3.2), cdbs, r-cran-hmisc (>= 4.0-0), r-cran-survival (>= 2.40), r-cran-sparsem, r-cran-quantreg, r-cran-nlme, r-cran-rpart, r-cran-foreign, r-cran-nnet, r-cran-polspline, r-cran-multcomp, r-cran-ggplot2, r-cran-htmltable, r-cran-htmltools
dpkg-deb: building package 'sbuild-build-depends-r-cran-rms-dummy' in '/<<BUILDDIR>>/resolver-puBZsS/apt_archive/sbuild-build-depends-r-cran-rms-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-rms-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Sources [606 B]
Get:5 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ Packages [684 B]
Fetched 2623 B in 0s (4106 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-rms build dependencies (apt-based resolver)
----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n kbd libfuse2 manpages netbase psmisc
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cdbs
cpp debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig
fontconfig-config fonts-dejavu-core fonts-mathjax gcc gettext gettext-base
gfortran gfortran-6 groff-base icu-devtools intltool-debian
libarchive-zip-perl libblas-common libblas-dev libblas3 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl3 libdatrie1 libexpat1 libffi6
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libgfortran-6-dev libgfortran3 libglib2.0-0 libgnutls30 libgraphite2-3
libgssapi-krb5-2 libharfbuzz0b libhogweed4 libice6 libicu-dev libicu57
libidn2-0 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libjs-highlight.js libjs-jquery libjs-mathjax libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2
libldap-common liblzma-dev libmagic-mgc libmagic1 libncurses5
libncurses5-dev libncursesw5 libnettle6 libnghttp2-14 libp11-kit0
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev librtmp1
libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libssl1.0.2
libssl1.1 libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff5
libtimedate-perl libtinfo-dev libtinfo5 libtk8.6 libtool libunistring0
libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6
libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4
man-db openssl po-debconf r-base-core r-base-dev r-cran-acepack
r-cran-assertthat r-cran-base64enc r-cran-chron r-cran-cluster
r-cran-codetools r-cran-colorspace r-cran-data.table r-cran-dichromat
r-cran-digest r-cran-evaluate r-cran-foreign r-cran-formula r-cran-ggplot2
r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hmisc r-cran-htmltable
r-cran-htmltools r-cran-knitr r-cran-labeling r-cran-lattice
r-cran-latticeextra r-cran-lazyeval r-cran-littler r-cran-magrittr
r-cran-markdown r-cran-mass r-cran-matrix r-cran-matrixmodels r-cran-mime
r-cran-multcomp r-cran-munsell r-cran-mvtnorm r-cran-nlme r-cran-nnet
r-cran-pkgkitten r-cran-plyr r-cran-polspline r-cran-quantreg
r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape2 r-cran-rpart r-cran-sandwich
r-cran-scales r-cran-sparsem r-cran-stringi r-cran-stringr r-cran-survival
r-cran-th.data r-cran-tibble r-cran-viridis r-cran-yaml r-cran-zoo ucf unzip
x11-common xauth xdg-utils zip zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation devscripts cpp-doc dh-make gcc-multilib manpages-dev flex bison gdb
gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc
gfortran-6-doc libgfortran3-dbg libcoarrays-dev groff liblapack-doc-man
liblapack-doc gnutls-bin krb5-doc krb5-user icu-doc fonts-mathjax-extras
fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc tcl8.6
tk8.6 libtool-doc gcj-jdk m4-doc less www-browser libmail-box-perl ess
r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
r-cran-kernsmooth r-cran-kernlab r-cran-vcd r-cran-shiny r-cran-reshape
r-cran-testthat r-cran-hexbin r-cran-fastmatch r-cran-xts r-cran-gdata
r-bioc-genomicranges r-cran-caret r-cran-curl r-cran-mapproj r-cran-maps
r-cran-maptools r-cran-mgcv r-cran-testit r-cran-formatr r-cran-rgl
r-cran-htmlwidgets r-cran-tikzdevice r-cran-png r-cran-xml r-cran-rcurl
r-cran-dbi r-cran-getopt r-cran-abind r-cran-foreach r-cran-doparallel
r-cran-iterators r-cran-inline gvfs-bin
Recommended packages:
curl | wget | lynx-cur bzip2-doc libglib2.0-data shared-mime-info
xdg-user-dirs javascript-common krb5-locales libgpm2 libpng-tools
publicsuffix libsasl2-modules libltdl-dev xml-core libmail-sendmail-perl
r-recommended r-doc-html r-cran-crayon libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cdbs
debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig
fontconfig-config fonts-dejavu-core fonts-mathjax gettext gettext-base
gfortran gfortran-6 groff-base icu-devtools intltool-debian
libarchive-zip-perl libblas-common libblas-dev libblas3 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl3 libdatrie1 libexpat1 libffi6
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libgfortran-6-dev libgfortran3 libglib2.0-0 libgnutls30 libgraphite2-3
libgssapi-krb5-2 libharfbuzz0b libhogweed4 libice6 libicu-dev libicu57
libidn2-0 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libjs-highlight.js libjs-jquery libjs-mathjax libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2
libldap-common liblzma-dev libmagic-mgc libmagic1 libncurses5-dev libnettle6
libnghttp2-14 libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16
libpsl5 libreadline-dev librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2
libsm6 libssh2-1 libssl1.0.2 libssl1.1 libtasn1-6 libtcl8.6 libthai-data
libthai0 libtiff5 libtimedate-perl libtinfo-dev libtk8.6 libtool
libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1
libxt6 littler m4 man-db openssl po-debconf r-base-core r-base-dev
r-cran-acepack r-cran-assertthat r-cran-base64enc r-cran-chron
r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-data.table
r-cran-dichromat r-cran-digest r-cran-evaluate r-cran-foreign r-cran-formula
r-cran-ggplot2 r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hmisc
r-cran-htmltable r-cran-htmltools r-cran-knitr r-cran-labeling
r-cran-lattice r-cran-latticeextra r-cran-lazyeval r-cran-littler
r-cran-magrittr r-cran-markdown r-cran-mass r-cran-matrix
r-cran-matrixmodels r-cran-mime r-cran-multcomp r-cran-munsell
r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-pkgkitten r-cran-plyr
r-cran-polspline r-cran-quantreg r-cran-rcolorbrewer r-cran-rcpp
r-cran-reshape2 r-cran-rpart r-cran-sandwich r-cran-scales r-cran-sparsem
r-cran-stringi r-cran-stringr r-cran-survival r-cran-th.data r-cran-tibble
r-cran-viridis r-cran-yaml r-cran-zoo sbuild-build-depends-r-cran-rms-dummy
ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
cpp gcc libncurses5 libncursesw5 libtinfo5 zlib1g
6 upgraded, 189 newly installed, 0 to remove and 57 not upgraded.
Need to get 130 MB/130 MB of archives.
After this operation, 357 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-puBZsS/apt_archive ./ sbuild-build-depends-r-cran-rms-dummy 0.invalid.0 [886 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libncurses5 armhf 6.0+20161126-1 [74.0 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libtinfo5 armhf 6.0+20161126-1 [288 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libncursesw5 armhf 6.0+20161126-1 [93.4 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.12 [178 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf zlib1g armhf 1:1.2.8.dfsg-4 [81.6 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.2.0-2 [62.2 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libpng16-16 armhf 1.6.28-1 [263 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libfreetype6 armhf 2.6.3-3+b1 [385 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf ucf all 3.0036 [70.2 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf fontconfig-config all 2.11.0-6.7 [271 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libfontconfig1 armhf 2.11.0-6.7 [313 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf fontconfig armhf 2.11.0-6.7 [402 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libjbig0 armhf 2.1-3.1 [27.5 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libpcrecpp0v5 armhf 2:8.39-2 [149 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libxdmcp6 armhf 1:1.1.2-1.1 [24.9 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libxcb1 armhf 1.12-1 [129 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libx11-data all 2:1.6.4-2 [290 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libx11-6 armhf 2:1.6.4-2 [681 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libxft2 armhf 2.3.2-1 [48.3 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf x11-common all 1:7.7+18 [251 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2j-5 [891 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libssl1.1 armhf 1.1.0c-2 [1101 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libmagic-mgc armhf 1:5.29-2 [221 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.29-2 [104 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.29-2 [63.1 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.3-2 [94.4 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.5.8-1 [823 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.15-1 [57.9 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.15-1 [115 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.15-1 [262 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.15-1 [132 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.27~101-g0780600+dfsg-2 [66.8 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.27~101-g0780600+dfsg-2 [98.0 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libldap-common all 2.4.44+dfsg-3 [84.5 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.44+dfsg-3 [194 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf libicu57 armhf 57.1-5 [7427 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2.1 [804 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-5 [733 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf openssl armhf 1.1.0c-2 [703 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf ca-certificates all 20161130 [203 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf cdbs all 0.4.150 [82.6 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf cpp armhf 4:6.2.1-1 [18.5 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf gcc armhf 4:6.2.1-1 [5188 B]
Get:61 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 13 [15.8 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.029-2 [15.3 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.029-2 [9330 B]
Get:67 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.50.2-2 [2527 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-2 [131 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf debhelper all 10.2.3 [829 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf fonts-mathjax all 2.7.0-1 [960 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 6.2.1-5+rpi1 [166 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf libgfortran-6-dev armhf 6.2.1-5+rpi1 [199 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf gfortran-6 armhf 6.2.1-5+rpi1 [5414 kB]
Get:78 http://172.17.0.1/private stretch-staging/main armhf gfortran armhf 4:6.2.1-1 [1340 B]
Get:79 http://172.17.0.1/private stretch-staging/main armhf icu-devtools armhf 57.1-5 [156 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf libblas-common armhf 3.7.0-1 [14.0 kB]
Get:81 http://172.17.0.1/private stretch-staging/main armhf libblas3 armhf 3.7.0-1 [107 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf libblas-dev armhf 3.7.0-1 [19.0 kB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf libbz2-dev armhf 1.0.6-8 [27.8 kB]
Get:84 http://172.17.0.1/private stretch-staging/main armhf libpixman-1-0 armhf 0.34.0-1 [451 kB]
Get:85 http://172.17.0.1/private stretch-staging/main armhf libxcb-render0 armhf 1.12-1 [104 kB]
Get:86 http://172.17.0.1/private stretch-staging/main armhf libxcb-shm0 armhf 1.12-1 [95.9 kB]
Get:87 http://172.17.0.1/private stretch-staging/main armhf libcairo2 armhf 1.14.8-1 [688 kB]
Get:88 http://172.17.0.1/private stretch-staging/main armhf libidn2-0 armhf 0.14-1 [58.3 kB]
Get:89 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.17.0-1 [70.1 kB]
Get:90 http://172.17.0.1/private stretch-staging/main armhf libpsl5 armhf 0.16.1-1 [41.2 kB]
Get:91 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:92 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.7.0-1 [125 kB]
Get:93 http://172.17.0.1/private stretch-staging/main armhf libcurl3 armhf 7.52.1-1 [260 kB]
Get:94 http://172.17.0.1/private stretch-staging/main armhf libdatrie1 armhf 0.2.10-4 [32.8 kB]
Get:95 http://172.17.0.1/private stretch-staging/main armhf libgraphite2-3 armhf 1.3.9-3 [62.9 kB]
Get:96 http://172.17.0.1/private stretch-staging/main armhf libharfbuzz0b armhf 1.2.7-1+b1 [589 kB]
Get:97 http://172.17.0.1/private stretch-staging/main armhf libice6 armhf 2:1.0.9-1+b1 [51.9 kB]
Get:98 http://172.17.0.1/private stretch-staging/main armhf libicu-dev armhf 57.1-5 [15.8 MB]
Get:99 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo armhf 1:1.5.1-2 [109 kB]
Get:100 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.1-2 [181 kB]
Get:101 http://172.17.0.1/private stretch-staging/main armhf libjpeg-dev all 1:1.5.1-2 [56.1 kB]
Get:102 http://172.17.0.1/private stretch-staging/main armhf libjs-highlight.js all 8.2+ds-5 [165 kB]
Get:103 http://172.17.0.1/private stretch-staging/main armhf libjs-jquery all 3.1.1-2 [154 kB]
Get:104 http://172.17.0.1/private stretch-staging/main armhf liblapack3 armhf 3.7.0-1 [1503 kB]
Get:105 http://172.17.0.1/private stretch-staging/main armhf liblapack-dev armhf 3.7.0-1 [1483 kB]
Get:106 http://172.17.0.1/private stretch-staging/main armhf liblzma-dev armhf 5.2.2-1.2 [284 kB]
Get:107 http://172.17.0.1/private stretch-staging/main armhf libtinfo-dev armhf 6.0+20161126-1 [65.3 kB]
Get:108 http://172.17.0.1/private stretch-staging/main armhf libncurses5-dev armhf 6.0+20161126-1 [245 kB]
Get:109 http://172.17.0.1/private stretch-staging/main armhf libthai-data all 0.1.26-1 [166 kB]
Get:110 http://172.17.0.1/private stretch-staging/main armhf libthai0 armhf 0.1.26-1 [49.3 kB]
Get:111 http://172.17.0.1/private stretch-staging/main armhf libpango-1.0-0 armhf 1.40.3-3 [300 kB]
Get:112 http://172.17.0.1/private stretch-staging/main armhf libpangoft2-1.0-0 armhf 1.40.3-3 [196 kB]
Get:113 http://172.17.0.1/private stretch-staging/main armhf libpangocairo-1.0-0 armhf 1.40.3-3 [186 kB]
Get:114 http://172.17.0.1/private stretch-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:115 http://172.17.0.1/private stretch-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:116 http://172.17.0.1/private stretch-staging/main armhf libpcre16-3 armhf 2:8.39-2 [235 kB]
Get:117 http://172.17.0.1/private stretch-staging/main armhf libpcre32-3 armhf 2:8.39-2 [227 kB]
Get:118 http://172.17.0.1/private stretch-staging/main armhf libpcre3-dev armhf 2:8.39-2 [568 kB]
Get:119 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-4 [198 kB]
Get:120 http://172.17.0.1/private stretch-staging/main armhf libpng-dev armhf 1.6.28-1 [232 kB]
Get:121 http://172.17.0.1/private stretch-staging/main armhf libreadline-dev armhf 7.0-1 [109 kB]
Get:122 http://172.17.0.1/private stretch-staging/main armhf libsm6 armhf 2:1.2.2-1+b1 [31.2 kB]
Get:123 http://172.17.0.1/private stretch-staging/main armhf libtcl8.6 armhf 8.6.6+dfsg-1 [861 kB]
Get:124 http://172.17.0.1/private stretch-staging/main armhf libtiff5 armhf 4.0.7-5 [211 kB]
Get:125 http://172.17.0.1/private stretch-staging/main armhf libtk8.6 armhf 8.6.6-1 [659 kB]
Get:126 http://172.17.0.1/private stretch-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:127 http://172.17.0.1/private stretch-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:128 http://172.17.0.1/private stretch-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:129 http://172.17.0.1/private stretch-staging/main armhf unzip armhf 6.0-21 [149 kB]
Get:130 http://172.17.0.1/private stretch-staging/main armhf xdg-utils all 1.1.1-1 [71.1 kB]
Get:131 http://172.17.0.1/private stretch-staging/main armhf r-base-core armhf 3.3.2-1 [20.8 MB]
Get:132 http://172.17.0.1/private stretch-staging/main armhf r-cran-littler armhf 0.3.1-1 [58.6 kB]
Get:133 http://172.17.0.1/private stretch-staging/main armhf littler all 0.3.1-1 [11.7 kB]
Get:134 http://172.17.0.1/private stretch-staging/main armhf xauth armhf 1:1.0.9-1 [35.6 kB]
Get:135 http://172.17.0.1/private stretch-staging/main armhf r-base-dev all 3.3.2-1 [4292 B]
Get:136 http://172.17.0.1/private stretch-staging/main armhf r-cran-acepack armhf 1.4.1-1 [50.6 kB]
Get:137 http://172.17.0.1/private stretch-staging/main armhf r-cran-assertthat all 0.1-1 [43.3 kB]
Get:138 http://172.17.0.1/private stretch-staging/main armhf r-cran-base64enc armhf 0.1-3-1 [23.3 kB]
Get:139 http://172.17.0.1/private stretch-staging/main armhf r-cran-chron armhf 2.3-48-1 [104 kB]
Get:140 http://172.17.0.1/private stretch-staging/main armhf r-cran-cluster armhf 2.0.5-1 [484 kB]
Get:141 http://172.17.0.1/private stretch-staging/main armhf r-cran-codetools all 0.2-15-1 [46.2 kB]
Get:142 http://172.17.0.1/private stretch-staging/main armhf r-cran-colorspace armhf 1.3-2-1 [385 kB]
Get:143 http://172.17.0.1/private stretch-staging/main armhf r-cran-data.table armhf 1.10.0-1 [1055 kB]
Get:144 http://172.17.0.1/private stretch-staging/main armhf r-cran-dichromat all 2.0.0-3 [146 kB]
Get:145 http://172.17.0.1/private stretch-staging/main armhf r-cran-digest armhf 0.6.11-1 [107 kB]
Get:146 http://172.17.0.1/private stretch-staging/main armhf r-cran-stringi armhf 1.1.2-1 [572 kB]
Get:147 http://172.17.0.1/private stretch-staging/main armhf r-cran-magrittr armhf 1.5-3 [146 kB]
Get:148 http://172.17.0.1/private stretch-staging/main armhf r-cran-stringr all 1.1.0-1 [117 kB]
Get:149 http://172.17.0.1/private stretch-staging/main armhf r-cran-evaluate all 0.10-1 [51.5 kB]
Get:150 http://172.17.0.1/private stretch-staging/main armhf r-cran-foreign armhf 0.8.67-1 [205 kB]
Get:151 http://172.17.0.1/private stretch-staging/main armhf r-cran-formula all 1.2-1-1 [162 kB]
Get:152 http://172.17.0.1/private stretch-staging/main armhf r-cran-gtable all 0.2.0-1 [65.1 kB]
Get:153 http://172.17.0.1/private stretch-staging/main armhf r-cran-mass armhf 7.3-45-1 [1017 kB]
Get:154 http://172.17.0.1/private stretch-staging/main armhf r-cran-pkgkitten all 0.1.4-1 [18.7 kB]
Get:155 http://172.17.0.1/private stretch-staging/main armhf r-cran-rcpp armhf 0.12.9-1 [2149 kB]
Get:156 http://172.17.0.1/private stretch-staging/main armhf r-cran-plyr armhf 1.8.4-1 [728 kB]
Get:157 http://172.17.0.1/private stretch-staging/main armhf r-cran-reshape2 armhf 1.4.2-1 [83.3 kB]
Get:158 http://172.17.0.1/private stretch-staging/main armhf r-cran-rcolorbrewer all 1.1-2-1 [26.0 kB]
Get:159 http://172.17.0.1/private stretch-staging/main armhf r-cran-munsell all 0.4.3-1 [127 kB]
Get:160 http://172.17.0.1/private stretch-staging/main armhf r-cran-labeling all 0.3-1 [39.9 kB]
Get:161 http://172.17.0.1/private stretch-staging/main armhf r-cran-scales armhf 0.4.1-1 [198 kB]
Get:162 http://172.17.0.1/private stretch-staging/main armhf r-cran-lazyeval armhf 0.2.0-1 [110 kB]
Get:163 http://172.17.0.1/private stretch-staging/main armhf r-cran-tibble armhf 1.2-1 [117 kB]
Get:164 http://172.17.0.1/private stretch-staging/main armhf r-cran-ggplot2 all 2.2.1-2 [2658 kB]
Get:165 http://172.17.0.1/private stretch-staging/main armhf r-cran-gridextra all 2.2.1-1 [451 kB]
Get:166 http://172.17.0.1/private stretch-staging/main armhf r-cran-highr all 0.6-1 [30.1 kB]
Get:167 http://172.17.0.1/private stretch-staging/main armhf r-cran-lattice armhf 0.20-34-1 [713 kB]
Get:168 http://172.17.0.1/private stretch-staging/main armhf r-cran-matrix armhf 1.2-7.1-1 [2248 kB]
Get:169 http://172.17.0.1/private stretch-staging/main armhf r-cran-survival armhf 2.40-1-1 [4853 kB]
Get:170 http://172.17.0.1/private stretch-staging/main armhf r-cran-rpart armhf 4.1-10-2 [858 kB]
Get:171 http://172.17.0.1/private stretch-staging/main armhf r-cran-latticeextra armhf 0.6-28-2 [2059 kB]
Get:172 http://172.17.0.1/private stretch-staging/main armhf r-cran-htmltools armhf 0.3.5-2 [114 kB]
Get:173 http://172.17.0.1/private stretch-staging/main armhf libjs-mathjax all 2.7.0-1 [5551 kB]
Get:174 http://172.17.0.1/private stretch-staging/main armhf r-cran-mime armhf 0.5-1 [25.4 kB]
Get:175 http://172.17.0.1/private stretch-staging/main armhf r-cran-markdown armhf 0.7.7-1 [89.4 kB]
Get:176 http://172.17.0.1/private stretch-staging/main armhf r-cran-yaml armhf 2.1.14-1 [69.4 kB]
Get:177 http://172.17.0.1/private stretch-staging/main armhf r-cran-knitr armhf 1.15.1-1 [785 kB]
Get:178 http://172.17.0.1/private stretch-staging/main armhf r-cran-viridis all 0.3.4-1 [1723 kB]
Get:179 http://172.17.0.1/private stretch-staging/main armhf r-cran-htmltable all 1.7-2 [153 kB]
Get:180 http://172.17.0.1/private stretch-staging/main armhf r-cran-hmisc armhf 4.0-2-1 [1739 kB]
Get:181 http://172.17.0.1/private stretch-staging/main armhf r-cran-matrixmodels all 0.4-1-1 [224 kB]
Get:182 http://172.17.0.1/private stretch-staging/main armhf r-cran-mvtnorm armhf 1.0-5-2 [176 kB]
Get:183 http://172.17.0.1/private stretch-staging/main armhf r-cran-zoo armhf 1.7-14-1 [873 kB]
Get:184 http://172.17.0.1/private stretch-staging/main armhf r-cran-sandwich all 2.3-4-2 [497 kB]
Get:185 http://172.17.0.1/private stretch-staging/main armhf r-cran-th.data armhf 1.0-7-2 [5197 kB]
Get:186 http://172.17.0.1/private stretch-staging/main armhf r-cran-multcomp all 1.4-6-1 [593 kB]
Get:187 http://172.17.0.1/private stretch-staging/main armhf r-cran-nlme armhf 3.1.128-2 [2001 kB]
Get:188 http://172.17.0.1/private stretch-staging/main armhf r-cran-nnet armhf 7.3-12-1 [96.0 kB]
Get:189 http://172.17.0.1/private stretch-staging/main armhf r-cran-polspline armhf 1.1.12-2 [385 kB]
Get:190 http://172.17.0.1/private stretch-staging/main armhf r-cran-sparsem armhf 1.74-1 [750 kB]
Get:191 http://172.17.0.1/private stretch-staging/main armhf r-cran-quantreg armhf 5.29-1 [1770 kB]
debconf: delaying package configuration, since apt-utils is not installed
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update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
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Setting up r-base-core (3.3.2-1) ...
Creating config file /etc/R/Renviron with new version
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Setting up r-cran-plyr (1.8.4-1) ...
Setting up r-cran-mime (0.5-1) ...
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Setting up r-cran-digest (0.6.11-1) ...
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Setting up r-cran-cluster (2.0.5-1) ...
Setting up r-cran-data.table (1.10.0-1) ...
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Setting up r-cran-codetools (0.2-15-1) ...
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Setting up debhelper (10.2.3) ...
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Setting up sbuild-build-depends-r-cran-rms-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
Processing triggers for systemd (232-6) ...
Processing triggers for ca-certificates (20161130) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.27.51.20161127-1 dpkg-dev_1.18.15 g++-6_6.2.1-5+rpi1 gcc-6_6.2.1-5+rpi1 libc6-dev_2.24-7+rpi1 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4~beta1 autoconf_2.69-10 automake_1:1.15-5 autopoint_0.19.8.1-1 autotools-dev_20161112.1 base-files_9.7+rpi1 base-passwd_3.5.41 bash_4.4-2 binutils_2.27.51.20161127-1 bsdmainutils_9.0.12 bsdutils_1:2.29-1 build-essential_12.2 bzip2_1.0.6-8 ca-certificates_20161130 cdbs_0.4.150 coreutils_8.25-2 cpio_2.11+dfsg-6 cpp_4:6.2.1-1 cpp-6_6.2.1-5+rpi1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_10.2.3 debianutils_4.8.1 dh-autoreconf_13 dh-strip-nondeterminism_0.029-2 diffutils_1:3.5-1 dmsetup_2:1.02.136-1 dpkg_1.18.15 dpkg-dev_1.18.15 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-2 file_1:5.29-2 findutils_4.6.0+git+20161106-1 fontconfig_2.11.0-6.7 fontconfig-config_2.11.0-6.7 fonts-dejavu-core_2.37-1 fonts-mathjax_2.7.0-1 fuse2fs_1.43.3-1 g++_4:6.1.1-1 g++-6_6.2.1-5+rpi1 gcc_4:6.2.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-6_6.2.1-5+rpi1 gcc-6-base_6.2.1-5+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gfortran_4:6.2.1-1 gfortran-6_6.2.1-5+rpi1 gnupg_2.1.16-2 gnupg-agent_2.1.16-2 gnupg-l10n_2.1.16-2 gpgv_2.1.16-2 grep_2.26-1 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 icu-devtools_57.1-5 init_1.46 init-system-helpers_1.46 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 kbd_2.0.3-2 klibc-utils_2.0.4-9+rpi1 kmod_23-1 libacl1_2.2.52-3 libapparmor1_2.10.95-6 libapt-pkg5.0_1.4~beta1 libarchive-zip-perl_1.59-1 libasan3_6.2.1-5+rpi1 libassuan0_2.4.3-2 libatomic1_6.2.1-5+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-1 libaudit1_1:2.6.7-1 libblas-common_3.7.0-1 libblas-dev_3.7.0-1 libblas3_3.7.0-1 libblkid1_2.29-1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.24-7+rpi1 libc-dev-bin_2.24-7+rpi1 libc6_2.24-7+rpi1 libc6-dev_2.24-7+rpi1 libcairo2_1.14.8-1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.2.1-5+rpi1 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.3-2 libcurl3_7.52.1-1 libdatrie1_0.2.10-4 libdb5.3_5.3.28-12 libdbus-1-3_1.10.14-1 libdebconfclient0_0.218 libdevmapper1.02.1_2:1.02.136-1 libdpkg-perl_1.18.15 libdrm2_2.4.74-1 libexpat1_2.2.0-2 libfakeroot_1.21-2 libfdisk1_2.29-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.029-2 libfontconfig1_2.11.0-6.7 libfreetype6_2.6.3-3+b1 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.2.1-5+rpi1 libgcc1_1:6.2.1-5+rpi1 libgcrypt20_1.7.3-2 libgdbm3_1.8.3-14 libgfortran-6-dev_6.2.1-5+rpi1 libgfortran3_6.2.1-5+rpi1 libglib2.0-0_2.50.2-2 libgmp10_2:6.1.1+dfsg-1 libgnutls30_3.5.8-1 libgomp1_6.2.1-5+rpi1 libgpg-error0_1.25-1 libgraphite2-3_1.3.9-3 libgssapi-krb5-2_1.15-1 libharfbuzz0b_1.2.7-1+b1 libhogweed4_3.3-1 libice6_2:1.0.9-1+b1 libicu-dev_57.1-5 libicu57_57.1-5 libidn11_1.33-1 libidn2-0_0.14-1 libip4tc0_1.6.0-4 libisl15_0.17.1-1 libjbig0_2.1-3.1 libjpeg-dev_1:1.5.1-2 libjpeg62-turbo_1:1.5.1-2 libjpeg62-turbo-dev_1:1.5.1-2 libjs-highlight.js_8.2+ds-5 libjs-jquery_3.1.1-2 libjs-mathjax_2.7.0-1 libk5crypto3_1.15-1 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_23-1 libkrb5-3_1.15-1 libkrb5support0_1.15-1 libksba8_1.3.5-2 liblapack-dev_3.7.0-1 liblapack3_3.7.0-1 libldap-2.4-2_2.4.44+dfsg-3 libldap-common_2.4.44+dfsg-3 liblz4-1_0.0~r131-2 liblzma-dev_5.2.2-1.2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.29-2 libmagic1_1:5.29-2 libmount1_2.29-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20161126-1 libncurses5-dev_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnettle6_3.3-1 libnghttp2-14_1.17.0-1 libnpth0_1.3-1 libp11-kit0_0.23.3-2 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpango-1.0-0_1.40.3-3 libpangocairo-1.0-0_1.40.3-3 libpangoft2-1.0-0_1.40.3-3 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre16-3_2:8.39-2 libpcre3_2:8.39-2 libpcre3-dev_2:8.39-2 libpcre32-3_2:8.39-2 libpcrecpp0v5_2:8.39-2 libperl5.24_5.24.1~rc4-1 libpipeline1_1.4.1-2 libpixman-1-0_0.34.0-1 libplymouth4_0.9.2-3 libpng-dev_1.6.28-1 libpng12-0_1.2.54-6 libpng16-16_1.6.28-1 libprocps6_2:3.3.12-3 libpsl5_0.16.1-1 libreadline-dev_7.0-1 libreadline7_7.0-1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-2 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-2 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-1 libsemanage1_2.6-1 libsepol1_2.6-1 libsigsegv2_2.10-5 libsm6_2:1.2.2-1+b1 libsmartcols1_2.29-1 libsqlite3-0_3.15.2-1 libss2_1.43.3-1 libssh2-1_1.7.0-1 libssl1.0.2_1.0.2j-5 libssl1.1_1.1.0c-2 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 libsystemd0_232-6 libtasn1-6_4.9-4 libtcl8.6_8.6.6+dfsg-1 libthai-data_0.1.26-1 libthai0_0.1.26-1 libtiff5_4.0.7-5 libtimedate-perl_2.3000-2 libtinfo-dev_6.0+20161126-1 libtinfo5_6.0+20161126-1 libtk8.6_8.6.6-1 libtool_2.4.6-2 libubsan0_6.2.1-5+rpi1 libudev1_232-6 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1 libx11-6_2:1.6.4-2 libx11-data_2:1.6.4-2 libxau6_1:1.0.8-1 libxcb-render0_1.12-1 libxcb-shm0_1.12-1 libxcb1_1.12-1 libxdmcp6_1:1.1.2-1.1 libxext6_2:1.3.3-1 libxft2_2.3.2-1 libxml2_2.9.4+dfsg1-2.1 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.2-1 libxt6_1:1.1.5-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch littler_0.3.1-1 login_1:4.2-3.3 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9 makedev_2.3.1-93 man-db_2.7.6.1-2 manpages_4.08-1 mawk_1.3.3-17 mount_2.29-1 multiarch-support_2.24-7+rpi1 ncurses-base_6.0+20160917-1 ncurses-bin_6.0+20160917-1 netbase_5.3 openssl_1.1.0c-2 passwd_1:4.2-3.3 patch_2.7.5-1 perl_5.24.1~rc4-1 perl-base_5.24.1~rc4-1 perl-modules-5.24_5.24.1~rc4-1 pinentry-curses_0.9.7-9 po-debconf_1.0.20 procps_2:3.3.12-3 psmisc_22.21-2.1 r-base-core_3.3.2-1 r-base-dev_3.3.2-1 r-cran-acepack_1.4.1-1 r-cran-assertthat_0.1-1 r-cran-base64enc_0.1-3-1 r-cran-chron_2.3-48-1 r-cran-cluster_2.0.5-1 r-cran-codetools_0.2-15-1 r-cran-colorspace_1.3-2-1 r-cran-data.table_1.10.0-1 r-cran-dichromat_2.0.0-3 r-cran-digest_0.6.11-1 r-cran-evaluate_0.10-1 r-cran-foreign_0.8.67-1 r-cran-formula_1.2-1-1 r-cran-ggplot2_2.2.1-2 r-cran-gridextra_2.2.1-1 r-cran-gtable_0.2.0-1 r-cran-highr_0.6-1 r-cran-hmisc_4.0-2-1 r-cran-htmltable_1.7-2 r-cran-htmltools_0.3.5-2 r-cran-knitr_1.15.1-1 r-cran-labeling_0.3-1 r-cran-lattice_0.20-34-1 r-cran-latticeextra_0.6-28-2 r-cran-lazyeval_0.2.0-1 r-cran-littler_0.3.1-1 r-cran-magrittr_1.5-3 r-cran-markdown_0.7.7-1 r-cran-mass_7.3-45-1 r-cran-matrix_1.2-7.1-1 r-cran-matrixmodels_0.4-1-1 r-cran-mime_0.5-1 r-cran-multcomp_1.4-6-1 r-cran-munsell_0.4.3-1 r-cran-mvtnorm_1.0-5-2 r-cran-nlme_3.1.128-2 r-cran-nnet_7.3-12-1 r-cran-pkgkitten_0.1.4-1 r-cran-plyr_1.8.4-1 r-cran-polspline_1.1.12-2 r-cran-quantreg_5.29-1 r-cran-rcolorbrewer_1.1-2-1 r-cran-rcpp_0.12.9-1 r-cran-reshape2_1.4.2-1 r-cran-rpart_4.1-10-2 r-cran-sandwich_2.3-4-2 r-cran-scales_0.4.1-1 r-cran-sparsem_1.74-1 r-cran-stringi_1.1.2-1 r-cran-stringr_1.1.0-1 r-cran-survival_2.40-1-1 r-cran-th.data_1.0-7-2 r-cran-tibble_1.2-1 r-cran-viridis_0.3.4-1 r-cran-yaml_2.1.14-1 r-cran-zoo_1.7-14-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-rms-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_232-6 systemd-sysv_232-6 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1.1 tzdata_2016j-2 ucf_3.0036 udev_232-6 unzip_6.0-21 util-linux_2.29-1 x11-common_1:7.7+18 xauth_1:1.0.9-1 xdg-utils_1.1.1-1 xz-utils_5.2.2-1.2 zip_3.0-11 zlib1g_1:1.2.8.dfsg-4 zlib1g-dev_1:1.2.8.dfsg-4
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Jan 3 19:03:27 2017 UTC
gpgv: using RSA key A1489FE2AB99A21A
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-rms_5.1-0-1.dsc
dpkg-source: info: extracting r-cran-rms in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-rms_5.1-0.orig.tar.gz
dpkg-source: info: applying r-cran-rms_5.1-0-1.diff.gz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-d13cb25d-f546-4806-bd1e-2b7e18531c06
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-rms
dpkg-buildpackage: info: source version 5.1-0-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build r-cran-rms-5.1-0
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
/usr/bin/make -f debian/rules reverse-config
make[1]: Entering directory '/<<PKGBUILDDIR>>'
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
make[1]: 'reverse-config' is up to date.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "reverse-patches" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
for dir in debian/patches ; do \
rm -f $dir/*.log ; \
done
dh_clean
dh_clean: Compatibility levels before 9 are deprecated (level 7 in use)
if test -d src; then \
find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
debian/rules build-arch
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
make[1]: Entering directory '/<<PKGBUILDDIR>>'
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
make[1]: 'reverse-config' is up to date.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
make[1]: Entering directory '/<<PKGBUILDDIR>>'
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
make[1]: 'update-config' is up to date.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
fakeroot debian/rules binary-arch
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
dh_prep
dh_installdirs -A
dh_installdirs: Compatibility levels before 9 are deprecated (level 7 in use)
mkdir -p "."
dh_installdirs usr/lib/R/site-library
dh_installdirs: Compatibility levels before 9 are deprecated (level 7 in use)
echo "R:Depends=r-base-core (>= 3.3.2-1), r-api-3" >> debian/r-cran-rms.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library --clean \
. \
"--built-timestamp=\"Tue, 03 Jan 2017 12:59:17 -0600\"" \
; \
else \
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library \
--clean . \
"--built-timestamp=\"Tue, 03 Jan 2017 12:59:17 -0600\"" \
; \
fi
* installing *source* package 'rms' ...
** package 'rms' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gfortran -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VDhYsW/r-base-3.3.2=. -fstack-protector-strong -c lrmfit.f -o lrmfit.o
gfortran -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VDhYsW/r-base-3.3.2=. -fstack-protector-strong -c mlmats.f -o mlmats.o
gfortran -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VDhYsW/r-base-3.3.2=. -fstack-protector-strong -c ormuv.f -o ormuv.o
gfortran -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VDhYsW/r-base-3.3.2=. -fstack-protector-strong -c robcovf.f -o robcovf.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o rms.so lrmfit.o mlmats.o ormuv.o robcovf.o -lgfortran -lm -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/libs
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (rms)
rm -vf /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/R.css \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/COPYING \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/LICENSE.txt \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/LICENSE
if test -f debian/overrides; then \
install -d /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/share/lintian/overrides/r-cran-rms; \
fi
Adding cdbs dependencies to debian/r-cran-rms.substvars
dh_installdirs -pr-cran-rms \
dh_installdirs: Compatibility levels before 9 are deprecated (level 7 in use)
dh_installdocs -pr-cran-rms ./NEWS
dh_installdocs: Compatibility levels before 9 are deprecated (level 7 in use)
dh_installexamples -pr-cran-rms
dh_installman -pr-cran-rms
dh_installinfo -pr-cran-rms
dh_installmenu -pr-cran-rms
dh_installcron -pr-cran-rms
dh_systemd_enable -pr-cran-rms
dh_installinit -pr-cran-rms
dh_installinit: Compatibility levels before 9 are deprecated (level 7 in use)
dh_installdebconf -pr-cran-rms
dh_installemacsen -pr-cran-rms
dh_installcatalogs -pr-cran-rms
dh_installpam -pr-cran-rms
dh_installlogrotate -pr-cran-rms
dh_installlogcheck -pr-cran-rms
dh_installchangelogs -pr-cran-rms
dh_installchangelogs: Compatibility levels before 9 are deprecated (level 7 in use)
dh_installudev -pr-cran-rms
dh_lintian -pr-cran-rms
dh_bugfiles -pr-cran-rms
dh_install -pr-cran-rms
dh_systemd_start -pr-cran-rms
dh_systemd_start: Compatibility levels before 9 are deprecated (level 7 in use)
dh_link -pr-cran-rms
dh_installmime -pr-cran-rms
dh_installgsettings -pr-cran-rms
dh_strip -pr-cran-rms
dh_strip: Compatibility levels before 9 are deprecated (level 7 in use)
dh_strip_nondeterminism -pr-cran-rms
dh_compress -pr-cran-rms
dh_fixperms -pr-cran-rms
dh_makeshlibs -pr-cran-rms
dh_installdeb -pr-cran-rms
dh_installdeb: Compatibility levels before 9 are deprecated (level 7 in use)
dh_perl -pr-cran-rms
dh_shlibdeps -pr-cran-rms
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-cran-rms/usr/lib/R/site-library/rms/libs/rms.so was not linked against libgfortran.so.3 (it uses none of the library's symbols)
dh_gencontrol -pr-cran-rms
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -pr-cran-rms
dh_builddeb -pr-cran-rms
dpkg-deb: building package 'r-cran-rms-dbgsym' in '../r-cran-rms-dbgsym_5.1-0-1_armhf.deb'.
dpkg-deb: building package 'r-cran-rms' in '../r-cran-rms_5.1-0-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genbuildinfo: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-cran-rms_5.1-0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build r-cran-rms-5.1-0
dpkg-buildpackage: info: binary-only upload (no source included)
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Build finished at 2017-01-26T10:45:30Z
Finished
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I: Built successfully
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| Changes |
+------------------------------------------------------------------------------+
r-cran-rms_5.1-0-1_armhf.changes:
---------------------------------
Format: 1.8
Date: Tue, 03 Jan 2017 12:59:17 -0600
Source: r-cran-rms
Binary: r-cran-rms
Architecture: armhf
Version: 5.1-0-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description:
r-cran-rms - GNU R regression modeling strategies by Frank Harrell
Changes:
r-cran-rms (5.1-0-1) unstable; urgency=medium
.
* New upstream release
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| Package contents |
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r-cran-rms-dbgsym_5.1-0-1_armhf.deb
-----------------------------------
new debian package, version 2.0.
size 16076 bytes: control archive=479 bytes.
398 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: r-cran-rms-dbgsym
Source: r-cran-rms
Version: 5.1-0-1
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 29
Depends: r-cran-rms (= 5.1-0-1)
Section: debug
Priority: extra
Homepage: http://biostat.mc.vanderbilt.edu/wiki/Main/Rrms
Description: Debug symbols for r-cran-rms
Auto-Built-Package: debug-symbols
Build-Ids: 3deff93e165f34f3780495cebc00feb6a3beddcf
drwxr-xr-x root/root 0 2017-01-03 18:59 ./
drwxr-xr-x root/root 0 2017-01-03 18:59 ./usr/
drwxr-xr-x root/root 0 2017-01-03 18:59 ./usr/lib/
drwxr-xr-x root/root 0 2017-01-03 18:59 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-01-03 18:59 ./usr/lib/debug/.build-id/
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drwxr-xr-x root/root 0 2017-01-03 18:59 ./usr/share/
drwxr-xr-x root/root 0 2017-01-03 18:59 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-01-03 18:59 ./usr/share/doc/r-cran-rms-dbgsym -> r-cran-rms
r-cran-rms_5.1-0-1_armhf.deb
----------------------------
new debian package, version 2.0.
size 1160982 bytes: control archive=3785 bytes.
1640 bytes, 28 lines control
7460 bytes, 97 lines md5sums
Package: r-cran-rms
Version: 5.1-0-1
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 1379
Depends: libc6 (>= 2.4), libgfortran3 (>= 4.3), r-base-core (>= 3.3.2-1), r-api-3, r-cran-hmisc (>= 4.0-0), r-cran-survival (>= 2.40), r-cran-sparsem, r-cran-quantreg, r-cran-nlme, r-cran-rpart, r-cran-foreign, r-cran-nnet, r-cran-polspline, r-cran-multcomp, r-cran-ggplot2, r-cran-htmltable, r-cran-htmltools
Conflicts: r-noncran-design
Replaces: r-noncran-design
Section: gnu-r
Priority: optional
Homepage: http://biostat.mc.vanderbilt.edu/wiki/Main/Rrms
Description: GNU R regression modeling strategies by Frank Harrell
Regression modeling, testing, estimation, validation, graphics,
prediction, and typesetting by storing enhanced model design
attributes in the fit. rms is a collection of 229 functions that
assist with and streamline modeling. It also contains functions for
binary and ordinal logistic regression models and the Buckley-James
multiple regression model for right-censored responses, and implements
penalized maximum likelihood estimation for logistic and ordinary
linear models. rms works with almost any regression model, but it
was especially written to work with binary or ordinal logistic
regression, Cox regression, accelerated failure time models,
ordinary linear models, the Buckley-James model, generalized least
squares for serially or spatially correlated observations, generalized
linear models, and quantile regression.
.
See Frank Harrell (2001), Regression Modeling Strategies, Springer
Series in Statistics, as well as http://biostat.mc.vanderbilt.edu/Rrms.
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Purging /<<BUILDDIR>>
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| Summary |
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Build Architecture: armhf
Build-Space: 4900
Build-Time: 114
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 739
Job: r-cran-rms_5.1-0-1
Machine Architecture: armhf
Package: r-cran-rms
Package-Time: 900
Source-Version: 5.1-0-1
Space: 4900
Status: successful
Version: 5.1-0-1
--------------------------------------------------------------------------------
Finished at 2017-01-26T10:45:30Z
Build needed 00:15:00, 4900k disc space