r-cran-rms →
4.5-0-2 →
armhf → 2016-07-13 06:49:51
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on bm-wb-02
+==============================================================================+
| r-cran-rms 4.5-0-2 (armhf) 13 Jul 2016 06:33 |
+==============================================================================+
Package: r-cran-rms
Version: 4.5-0-2
Source Version: 4.5-0-2
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/r-cran-rms-nm_or8/r-cran-rms-4.5-0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-rms-nm_or8' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-77d34f65-966b-4dc3-897b-92ee757c2d5c' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9154 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.1 MB]
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+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
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Checking available source versions...
Download source files with APT
------------------------------
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Need to get 485 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main r-cran-rms 4.5-0-2 (dsc) [1935 B]
Get:2 http://172.17.0.1/private stretch-staging/main r-cran-rms 4.5-0-2 (tar) [479 kB]
Get:3 http://172.17.0.1/private stretch-staging/main r-cran-rms 4.5-0-2 (diff) [3833 B]
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Download complete and in download only mode
Check architectures
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Check dependencies
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-Dv4PSF/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-Dv4PSF/apt_archive ./ InRelease
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Get:3 file:/<<BUILDDIR>>/resolver-Dv4PSF/apt_archive ./ Release.gpg [299 B]
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Get:4 file:/<<BUILDDIR>>/resolver-Dv4PSF/apt_archive ./ Sources [194 B]
Get:5 file:/<<BUILDDIR>>/resolver-Dv4PSF/apt_archive ./ Packages [507 B]
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Reading package lists...
+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 10 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 13672 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: debhelper (>= 7.0.0), r-base-dev (>= 3.3.1), cdbs, r-cran-hmisc (>= 3.17-3), r-cran-survival (>= 2.36-3), r-cran-sparsem, r-cran-quantreg, r-cran-nlme, r-cran-rpart, r-cran-polspline, r-cran-multcomp, r-cran-foreign, r-cran-nnet, r-cran-ggplot2, r-cran-gridextra
Filtered Build-Depends: debhelper (>= 7.0.0), r-base-dev (>= 3.3.1), cdbs, r-cran-hmisc (>= 3.17-3), r-cran-survival (>= 2.36-3), r-cran-sparsem, r-cran-quantreg, r-cran-nlme, r-cran-rpart, r-cran-polspline, r-cran-multcomp, r-cran-foreign, r-cran-nnet, r-cran-ggplot2, r-cran-gridextra
dpkg-deb: building package 'sbuild-build-depends-r-cran-rms-dummy' in '/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive/sbuild-build-depends-r-cran-rms-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ Sources [298 B]
Get:5 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ Packages [617 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: file:///<<BUILDDIR>>/resolver-Fzw2yg/apt_archive/./Release.gpg: Signature by key 3493EC2B8E6DC280C121C60435506D9A48F77B2E uses weak digest algorithm (SHA1)
Reading package lists...
+------------------------------------------------------------------------------+
| Install r-cran-rms build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cdbs
debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-5
groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-common
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3
libdatrie1 libexpat1 libffi6 libfile-stripnondeterminism-perl libfontconfig1
libfreetype6 libgfortran-5-dev libgfortran3 libglib2.0-0 libgnutls30
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhogweed4 libice6 libicu-dev
libicu55 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
libldap-2.4-2 liblzma-dev libmagic1 libncurses5-dev libnettle6 libnghttp2-14
libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libreadline-dev
libreadline6-dev librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6
libssh2-1 libssl1.0.2 libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff5
libtinfo-dev libtk8.6 libtool libunistring0 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxss1 libxt6 littler m4 man-db openssl po-debconf r-base-core
r-base-dev r-cran-acepack r-cran-chron r-cran-cluster r-cran-codetools
r-cran-colorspace r-cran-data.table r-cran-dichromat r-cran-digest
r-cran-foreign r-cran-formula r-cran-ggplot2 r-cran-gridextra r-cran-gtable
r-cran-hmisc r-cran-labeling r-cran-lattice r-cran-latticeextra
r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixmodels
r-cran-multcomp r-cran-munsell r-cran-mvtnorm r-cran-nlme r-cran-nnet
r-cran-pkgkitten r-cran-plyr r-cran-polspline r-cran-proto r-cran-quantreg
r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape2 r-cran-rpart r-cran-sandwich
r-cran-scales r-cran-sparsem r-cran-stringi r-cran-stringr r-cran-survival
r-cran-th.data r-cran-zoo ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation devscripts dh-make gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-5-doc libgfortran3-dbg groff liblapack-doc-man
liblapack-doc gnutls-bin krb5-doc krb5-user icu-doc liblzma-doc ncurses-doc
readline-doc tcl8.6 tk8.6 libtool-doc gcj-jdk less www-browser
libmail-box-perl ess r-doc-info | r-doc-pdf r-mathlib r-base-html
texlive-base texlive-latex-base texlive-generic-recommended
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-cran-getopt
r-cran-inline gvfs-bin
Recommended packages:
curl | wget | lynx-cur bzip2-doc libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales libpng-tools libsasl2-modules libltdl-dev
xml-core libmail-sendmail-perl r-recommended r-doc-html r-cran-sp
r-cran-mapproj r-cran-crayon r-cran-domc r-cran-abind libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cdbs
debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-5
groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-common
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3
libdatrie1 libexpat1 libffi6 libfile-stripnondeterminism-perl libfontconfig1
libfreetype6 libgfortran-5-dev libgfortran3 libglib2.0-0 libgnutls30
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhogweed4 libice6 libicu-dev
libicu55 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
libldap-2.4-2 liblzma-dev libmagic1 libncurses5-dev libnettle6 libnghttp2-14
libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libreadline-dev
libreadline6-dev librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6
libssh2-1 libssl1.0.2 libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff5
libtinfo-dev libtk8.6 libtool libunistring0 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxss1 libxt6 littler m4 man-db openssl po-debconf r-base-core
r-base-dev r-cran-acepack r-cran-chron r-cran-cluster r-cran-codetools
r-cran-colorspace r-cran-data.table r-cran-dichromat r-cran-digest
r-cran-foreign r-cran-formula r-cran-ggplot2 r-cran-gridextra r-cran-gtable
r-cran-hmisc r-cran-labeling r-cran-lattice r-cran-latticeextra
r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixmodels
r-cran-multcomp r-cran-munsell r-cran-mvtnorm r-cran-nlme r-cran-nnet
r-cran-pkgkitten r-cran-plyr r-cran-polspline r-cran-proto r-cran-quantreg
r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape2 r-cran-rpart r-cran-sandwich
r-cran-scales r-cran-sparsem r-cran-stringi r-cran-stringr r-cran-survival
r-cran-th.data r-cran-zoo sbuild-build-depends-r-cran-rms-dummy ucf unzip
x11-common xdg-utils zip zlib1g-dev
0 upgraded, 166 newly installed, 0 to remove and 10 not upgraded.
Need to get 117 MB/128 MB of archives.
After this operation, 348 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-Fzw2yg/apt_archive ./ sbuild-build-depends-r-cran-rms-dummy 0.invalid.0 [874 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-8 [1087 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.10 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.2.0-1 [61.7 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libpng16-16 armhf 1.6.23-1 [260 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf libfreetype6 armhf 2.6.3-3+b1 [385 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf ucf all 3.0036 [70.2 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf fonts-dejavu-core all 2.35-1 [1064 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf fontconfig-config all 2.11.0-6.4 [271 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libfontconfig1 armhf 2.11.0-6.4 [313 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf fontconfig armhf 2.11.0-6.4 [401 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libjbig0 armhf 2.1-3.1 [27.5 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf libpaper1 armhf 1.1.24+nmu4 [21.4 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libpcrecpp0v5 armhf 2:8.38-3.1 [148 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libxdmcp6 armhf 1:1.1.2-1.1 [24.9 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libxcb1 armhf 1.11.1-1 [40.9 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libx11-data all 2:1.6.3-1 [128 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libx11-6 armhf 2:1.6.3-1 [678 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libxrender1 armhf 1:0.9.9-2 [28.9 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libxft2 armhf 2.3.2-1 [48.3 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf x11-common all 1:7.7+15 [251 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2h-1 [889 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.28-2 [269 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.28-2 [62.4 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.8.1-1 [117 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libnettle6 armhf 3.2-1 [202 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libhogweed4 armhf 3.2-1 [126 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.2-3 [93.3 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6 armhf 4.8-1 [44.1 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.4.13-1 [737 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.14.2+dfsg-1 [57.2 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.14.2+dfsg-1 [111 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.14.2+dfsg-1 [261 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.14.2+dfsg-1 [131 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.26.dfsg1-15 [65.6 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.26.dfsg1-15 [96.7 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b2 [198 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20160430.1 [72.6 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.8.1-1 [433 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf openssl armhf 1.0.2h-1 [667 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf ca-certificates all 20160104 [200 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf cdbs all 0.4.142 [80.7 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.6+really0.9.3-0.1 [252 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.8.1-1 [1433 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.57-1 [95.1 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.019-1 [12.2 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.019-1 [7352 B]
Get:62 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160403 [800 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 6.1.1-1+rpi1 [166 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf libgfortran-5-dev armhf 5.4.0-4 [182 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf gfortran-5 armhf 5.4.0-4 [23.7 MB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf gfortran armhf 4:5.3.1-3 [1370 B]
Get:69 http://172.17.0.1/private stretch-staging/main armhf icu-devtools armhf 55.1-7 [163 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf libblas-common armhf 3.6.1-1 [13.8 kB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf libblas3 armhf 3.6.1-1 [112 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf libblas-dev armhf 3.6.1-1 [18.9 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf libbz2-dev armhf 1.0.6-8 [27.8 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf libpixman-1-0 armhf 0.33.6-1 [454 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf libxcb-render0 armhf 1.11.1-1 [17.0 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf libxcb-shm0 armhf 1.11.1-1 [11.5 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf libcairo2 armhf 1.14.6-1+b1 [686 kB]
Get:78 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.12.0-2 [73.8 kB]
Get:79 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.5.0-2.1 [121 kB]
Get:81 http://172.17.0.1/private stretch-staging/main armhf libcurl3 armhf 7.47.0-1 [247 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf libdatrie1 armhf 0.2.10-2 [32.5 kB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf libgraphite2-3 armhf 1.3.8-1 [62.5 kB]
Get:84 http://172.17.0.1/private stretch-staging/main armhf libharfbuzz0b armhf 1.2.6-2 [585 kB]
Get:85 http://172.17.0.1/private stretch-staging/main armhf libice6 armhf 2:1.0.9-1+b1 [51.9 kB]
Get:86 http://172.17.0.1/private stretch-staging/main armhf libicu-dev armhf 55.1-7 [8339 kB]
Get:87 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo armhf 1:1.5.0-1 [109 kB]
Get:88 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.0-1 [181 kB]
Get:89 http://172.17.0.1/private stretch-staging/main armhf libjpeg-dev all 1:1.5.0-1 [54.8 kB]
Get:90 http://172.17.0.1/private stretch-staging/main armhf liblapack3 armhf 3.6.1-1 [1395 kB]
Get:91 http://172.17.0.1/private stretch-staging/main armhf liblapack-dev armhf 3.6.1-1 [1379 kB]
Get:92 http://172.17.0.1/private stretch-staging/main armhf liblzma-dev armhf 5.1.1alpha+20120614-2.1 [248 kB]
Get:93 http://172.17.0.1/private stretch-staging/main armhf libtinfo-dev armhf 6.0+20160319-2 [65.6 kB]
Get:94 http://172.17.0.1/private stretch-staging/main armhf libncurses5-dev armhf 6.0+20160319-2 [154 kB]
Get:95 http://172.17.0.1/private stretch-staging/main armhf libthai-data all 0.1.25-1 [165 kB]
Get:96 http://172.17.0.1/private stretch-staging/main armhf libthai0 armhf 0.1.25-1 [48.5 kB]
Get:97 http://172.17.0.1/private stretch-staging/main armhf libpango-1.0-0 armhf 1.40.1-1 [293 kB]
Get:98 http://172.17.0.1/private stretch-staging/main armhf libpangoft2-1.0-0 armhf 1.40.1-1 [231 kB]
Get:99 http://172.17.0.1/private stretch-staging/main armhf libpangocairo-1.0-0 armhf 1.40.1-1 [220 kB]
Get:100 http://172.17.0.1/private stretch-staging/main armhf libpaper-utils armhf 1.1.24+nmu4 [17.2 kB]
Get:101 http://172.17.0.1/private stretch-staging/main armhf libpcre16-3 armhf 2:8.38-3.1 [229 kB]
Get:102 http://172.17.0.1/private stretch-staging/main armhf libpcre32-3 armhf 2:8.38-3.1 [223 kB]
Get:103 http://172.17.0.1/private stretch-staging/main armhf libpcre3-dev armhf 2:8.38-3.1 [556 kB]
Get:104 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:105 http://172.17.0.1/private stretch-staging/main armhf libpng-dev armhf 1.6.23-1 [228 kB]
Get:106 http://172.17.0.1/private stretch-staging/main armhf libreadline6-dev armhf 6.3-8+b3 [105 kB]
Get:107 http://172.17.0.1/private stretch-staging/main armhf libreadline-dev armhf 6.3-8+b3 [958 B]
Get:108 http://172.17.0.1/private stretch-staging/main armhf libsm6 armhf 2:1.2.2-1+b1 [31.2 kB]
Get:109 http://172.17.0.1/private stretch-staging/main armhf libtcl8.6 armhf 8.6.5+dfsg-2 [862 kB]
Get:110 http://172.17.0.1/private stretch-staging/main armhf libtiff5 armhf 4.0.6-1 [201 kB]
Get:111 http://172.17.0.1/private stretch-staging/main armhf libtk8.6 armhf 8.6.5-1 [657 kB]
Get:112 http://172.17.0.1/private stretch-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:113 http://172.17.0.1/private stretch-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:114 http://172.17.0.1/private stretch-staging/main armhf unzip armhf 6.0-20 [142 kB]
Get:115 http://172.17.0.1/private stretch-staging/main armhf xdg-utils all 1.1.1-1 [71.1 kB]
Get:116 http://172.17.0.1/private stretch-staging/main armhf r-base-core armhf 3.3.1-1 [20.7 MB]
Get:117 http://172.17.0.1/private stretch-staging/main armhf r-cran-littler armhf 0.3.0-3 [53.9 kB]
Get:118 http://172.17.0.1/private stretch-staging/main armhf littler all 0.3.0-3 [11.0 kB]
Get:119 http://172.17.0.1/private stretch-staging/main armhf r-base-dev all 3.3.1-1 [4306 B]
Get:120 http://172.17.0.1/private stretch-staging/main armhf r-cran-acepack armhf 1.3.3.3-2 [34.0 kB]
Get:121 http://172.17.0.1/private stretch-staging/main armhf r-cran-chron armhf 2.3-47-1 [104 kB]
Get:122 http://172.17.0.1/private stretch-staging/main armhf r-cran-cluster armhf 2.0.4-1 [478 kB]
Get:123 http://172.17.0.1/private stretch-staging/main armhf r-cran-codetools all 0.2-14-2 [46.4 kB]
Get:124 http://172.17.0.1/private stretch-staging/main armhf r-cran-colorspace armhf 1.2-4-1 [347 kB]
Get:125 http://172.17.0.1/private stretch-staging/main armhf r-cran-data.table armhf 1.9.6-1 [1331 kB]
Get:126 http://172.17.0.1/private stretch-staging/main armhf r-cran-dichromat all 2.0.0-3 [146 kB]
Get:127 http://172.17.0.1/private stretch-staging/main armhf r-cran-digest armhf 0.6.9-1 [103 kB]
Get:128 http://172.17.0.1/private stretch-staging/main armhf r-cran-foreign armhf 0.8.66-2 [204 kB]
Get:129 http://172.17.0.1/private stretch-staging/main armhf r-cran-formula all 1.2-1-1 [162 kB]
Get:130 http://172.17.0.1/private stretch-staging/main armhf r-cran-gtable all 0.1.2-1.1 [62.3 kB]
Get:131 http://172.17.0.1/private stretch-staging/main armhf r-cran-mass armhf 7.3-45-1 [1017 kB]
Get:132 http://172.17.0.1/private stretch-staging/main armhf r-cran-proto armhf 0.3-10-1 [463 kB]
Get:133 http://172.17.0.1/private stretch-staging/main armhf r-cran-pkgkitten all 0.1.3-1 [18.3 kB]
Get:134 http://172.17.0.1/private stretch-staging/main armhf r-cran-rcpp armhf 0.12.5-1 [2126 kB]
Get:135 http://172.17.0.1/private stretch-staging/main armhf r-cran-plyr armhf 1.8.3-2 [728 kB]
Get:136 http://172.17.0.1/private stretch-staging/main armhf r-cran-magrittr armhf 1.5-3 [146 kB]
Get:137 http://172.17.0.1/private stretch-staging/main armhf r-cran-stringi armhf 1.0-1-1 [623 kB]
Get:138 http://172.17.0.1/private stretch-staging/main armhf r-cran-stringr all 1.0.0-1 [76.6 kB]
Get:139 http://172.17.0.1/private stretch-staging/main armhf r-cran-lattice armhf 0.20-33-1 [713 kB]
Get:140 http://172.17.0.1/private stretch-staging/main armhf r-cran-reshape2 armhf 1.4-1 [79.9 kB]
Get:141 http://172.17.0.1/private stretch-staging/main armhf r-cran-rcolorbrewer all 1.1-2-1 [26.0 kB]
Get:142 http://172.17.0.1/private stretch-staging/main armhf r-cran-munsell all 0.4.2-1 [116 kB]
Get:143 http://172.17.0.1/private stretch-staging/main armhf r-cran-labeling all 0.3-1 [39.9 kB]
Get:144 http://172.17.0.1/private stretch-staging/main armhf r-cran-scales armhf 0.3.0-1 [192 kB]
Get:145 http://172.17.0.1/private stretch-staging/main armhf r-cran-ggplot2 all 2.1.0-3 [1956 kB]
Get:146 http://172.17.0.1/private stretch-staging/main armhf r-cran-gridextra all 2.2.1-1 [451 kB]
Get:147 http://172.17.0.1/private stretch-staging/main armhf r-cran-matrix armhf 1.2-6-1 [2929 kB]
Get:148 http://172.17.0.1/private stretch-staging/main armhf r-cran-survival armhf 2.39-5-1 [4612 kB]
Get:149 http://172.17.0.1/private stretch-staging/main armhf r-cran-rpart armhf 4.1-10-1 [857 kB]
Get:150 http://172.17.0.1/private stretch-staging/main armhf r-cran-latticeextra armhf 0.6-28-2 [2059 kB]
Get:151 http://172.17.0.1/private stretch-staging/main armhf r-cran-hmisc armhf 3.17-4-1 [1604 kB]
Get:152 http://172.17.0.1/private stretch-staging/main armhf r-cran-matrixmodels all 0.4-1-1 [224 kB]
Get:153 http://172.17.0.1/private stretch-staging/main armhf r-cran-mvtnorm armhf 1.0-5-2 [176 kB]
Get:154 http://172.17.0.1/private stretch-staging/main armhf r-cran-zoo armhf 1.7-13-1 [866 kB]
Get:155 http://172.17.0.1/private stretch-staging/main armhf r-cran-sandwich all 2.3-4-2 [497 kB]
Get:156 http://172.17.0.1/private stretch-staging/main armhf r-cran-th.data armhf 1.0-7-2 [5197 kB]
Get:157 http://172.17.0.1/private stretch-staging/main armhf r-cran-multcomp all 1.4-5-1 [593 kB]
Get:158 http://172.17.0.1/private stretch-staging/main armhf r-cran-nlme armhf 3.1.128-2 [2001 kB]
Get:159 http://172.17.0.1/private stretch-staging/main armhf r-cran-nnet armhf 7.3-12-1 [96.0 kB]
Get:160 http://172.17.0.1/private stretch-staging/main armhf r-cran-polspline armhf 1.1.12-2 [385 kB]
Get:161 http://172.17.0.1/private stretch-staging/main armhf r-cran-sparsem armhf 1.7-1 [616 kB]
Get:162 http://172.17.0.1/private stretch-staging/main armhf r-cran-quantreg armhf 5.26-1 [1770 kB]
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Setting up libkrb5support0:armhf (1.14.2+dfsg-1) ...
Setting up libk5crypto3:armhf (1.14.2+dfsg-1) ...
Setting up libkrb5-3:armhf (1.14.2+dfsg-1) ...
Setting up libgssapi-krb5-2:armhf (1.14.2+dfsg-1) ...
Setting up libsasl2-modules-db:armhf (2.1.26.dfsg1-15) ...
Setting up libsasl2-2:armhf (2.1.26.dfsg1-15) ...
Setting up libldap-2.4-2:armhf (2.4.42+dfsg-2+rpi1+b2) ...
Setting up libicu55:armhf (55.1-7) ...
Setting up libxml2:armhf (2.9.3+dfsg1-1.2) ...
Setting up libsigsegv2:armhf (2.10-5) ...
Setting up m4 (1.4.17-5) ...
Setting up autoconf (2.69-10) ...
Setting up autotools-dev (20160430.1) ...
Setting up automake (1:1.15-4) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up autopoint (0.19.8.1-1) ...
Setting up openssl (1.0.2h-1) ...
Setting up ca-certificates (20160104) ...
Setting up cdbs (0.4.142) ...
Setting up libglib2.0-0:armhf (2.48.1-1) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up gettext (0.19.8.1-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.19) ...
Setting up libarchive-zip-perl (1.57-1) ...
Setting up libfile-stripnondeterminism-perl (0.019-1) ...
Setting up libtool (2.4.6-0.1) ...
Setting up libgfortran3:armhf (6.1.1-1+rpi1) ...
Setting up libgfortran-5-dev:armhf (5.4.0-4) ...
Setting up gfortran-5 (5.4.0-4) ...
Setting up gfortran (4:5.3.1-3) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up icu-devtools (55.1-7) ...
Setting up libblas-common (3.6.1-1) ...
Setting up libblas3 (3.6.1-1) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up libblas-dev (3.6.1-1) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libbz2-dev:armhf (1.0.6-8) ...
Setting up libpixman-1-0:armhf (0.33.6-1) ...
Setting up libxcb-render0:armhf (1.11.1-1) ...
Setting up libxcb-shm0:armhf (1.11.1-1) ...
Setting up libcairo2:armhf (1.14.6-1+b1) ...
Setting up libnghttp2-14:armhf (1.12.0-2) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up libssh2-1:armhf (1.5.0-2.1) ...
Setting up libcurl3:armhf (7.47.0-1) ...
Setting up libdatrie1:armhf (0.2.10-2) ...
Setting up libgraphite2-3:armhf (1.3.8-1) ...
Setting up libharfbuzz0b:armhf (1.2.6-2) ...
Setting up libice6:armhf (2:1.0.9-1+b1) ...
Setting up libicu-dev:armhf (55.1-7) ...
Setting up libjpeg62-turbo:armhf (1:1.5.0-1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.0-1) ...
Setting up libjpeg-dev (1:1.5.0-1) ...
Setting up liblapack3 (3.6.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.6.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up liblzma-dev:armhf (5.1.1alpha+20120614-2.1) ...
Setting up libtinfo-dev:armhf (6.0+20160319-2) ...
Setting up libncurses5-dev:armhf (6.0+20160319-2) ...
Setting up libthai-data (0.1.25-1) ...
Setting up libthai0:armhf (0.1.25-1) ...
Setting up libpango-1.0-0:armhf (1.40.1-1) ...
Setting up libpangoft2-1.0-0:armhf (1.40.1-1) ...
Setting up libpangocairo-1.0-0:armhf (1.40.1-1) ...
Setting up libpaper-utils (1.1.24+nmu4) ...
Setting up libpcre16-3:armhf (2:8.38-3.1) ...
Setting up libpcre32-3:armhf (2:8.38-3.1) ...
Setting up libpcre3-dev:armhf (2:8.38-3.1) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up libpng-dev:armhf (1.6.23-1) ...
Setting up libreadline6-dev:armhf (6.3-8+b3) ...
Setting up libreadline-dev:armhf (6.3-8+b3) ...
Setting up libsm6:armhf (2:1.2.2-1+b1) ...
Setting up libtcl8.6:armhf (8.6.5+dfsg-2) ...
Setting up libtiff5:armhf (4.0.6-1) ...
Setting up libtk8.6:armhf (8.6.5-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up zip (3.0-11) ...
Setting up unzip (6.0-20) ...
Setting up xdg-utils (1.1.1-1) ...
Setting up r-base-core (3.3.1-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-littler (0.3.0-3) ...
Setting up littler (0.3.0-3) ...
Setting up r-base-dev (3.3.1-1) ...
Setting up r-cran-acepack (1.3.3.3-2) ...
Setting up r-cran-chron (2.3-47-1) ...
Setting up r-cran-cluster (2.0.4-1) ...
Setting up r-cran-codetools (0.2-14-2) ...
Setting up r-cran-colorspace (1.2-4-1) ...
Setting up r-cran-data.table (1.9.6-1) ...
Setting up r-cran-dichromat (2.0.0-3) ...
Setting up r-cran-digest (0.6.9-1) ...
Setting up r-cran-foreign (0.8.66-2) ...
Setting up r-cran-formula (1.2-1-1) ...
Setting up r-cran-gtable (0.1.2-1.1) ...
Setting up r-cran-mass (7.3-45-1) ...
Setting up r-cran-proto (0.3-10-1) ...
Setting up r-cran-pkgkitten (0.1.3-1) ...
Setting up r-cran-rcpp (0.12.5-1) ...
Setting up r-cran-plyr (1.8.3-2) ...
Setting up r-cran-magrittr (1.5-3) ...
Setting up r-cran-stringi (1.0-1-1) ...
Setting up r-cran-stringr (1.0.0-1) ...
Setting up r-cran-lattice (0.20-33-1) ...
Setting up r-cran-reshape2 (1.4-1) ...
Setting up r-cran-rcolorbrewer (1.1-2-1) ...
Setting up r-cran-munsell (0.4.2-1) ...
Setting up r-cran-labeling (0.3-1) ...
Setting up r-cran-scales (0.3.0-1) ...
Setting up r-cran-ggplot2 (2.1.0-3) ...
Setting up r-cran-gridextra (2.2.1-1) ...
Setting up r-cran-matrix (1.2-6-1) ...
Setting up r-cran-survival (2.39-5-1) ...
Setting up r-cran-rpart (4.1-10-1) ...
Setting up r-cran-latticeextra (0.6-28-2) ...
Setting up r-cran-hmisc (3.17-4-1) ...
Setting up r-cran-matrixmodels (0.4-1-1) ...
Setting up r-cran-mvtnorm (1.0-5-2) ...
Setting up r-cran-zoo (1.7-13-1) ...
Setting up r-cran-sandwich (2.3-4-2) ...
Setting up r-cran-th.data (1.0-7-2) ...
Setting up r-cran-multcomp (1.4-5-1) ...
Setting up r-cran-nlme (3.1.128-2) ...
Setting up r-cran-nnet (7.3-12-1) ...
Setting up r-cran-polspline (1.1.12-2) ...
Setting up r-cran-sparsem (1.7-1) ...
Setting up r-cran-quantreg (5.26-1) ...
Setting up dh-autoreconf (12) ...
Setting up debhelper (9.20160403) ...
Setting up sbuild-build-depends-r-cran-rms-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (0.019-1) ...
Processing triggers for libc-bin (2.22-11) ...
Processing triggers for systemd (230-5) ...
Processing triggers for ca-certificates (20160104) ...
Updating certificates in /etc/ssl/certs...
173 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26.1-1 dpkg-dev_1.18.7 g++-5_5.4.0-4 gcc-5_5.4.0-4 libc6-dev_2.22-11 libstdc++-4.9-dev_4.9.3-14 libstdc++-5-dev_5.4.0-4 libstdc++6_6.1.1-1+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-3 adduser_3.115 apt_1.2.14 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.8.1-1 autotools-dev_20160430.1 base-files_9.6+rpi1 base-passwd_3.5.39 bash_4.3-15 binutils_2.26.1-1 bsdmainutils_9.0.10 bsdutils_1:2.28-5 build-essential_11.7 bzip2_1.0.6-8 ca-certificates_20160104 cdbs_0.4.142 coreutils_8.25-2 cpio_2.11+dfsg-5 cpp_4:5.3.1-3 cpp-5_5.4.0-4 dash_0.5.8-2.2 debconf_1.5.59 debfoster_2.7-2 debhelper_9.20160403 debianutils_4.8 dh-autoreconf_12 dh-strip-nondeterminism_0.019-1 diffutils_1:3.3-3 dmsetup_2:1.02.127-1 dpkg_1.18.7 dpkg-dev_1.18.7 e2fslibs_1.43.1-1 e2fsprogs_1.43.1-1 fakeroot_1.21-1 file_1:5.28-2 findutils_4.6.0+git+20160517-5 fontconfig_2.11.0-6.4 fontconfig-config_2.11.0-6.4 fonts-dejavu-core_2.35-1 fuse2fs_1.43.1-1 g++_4:5.3.1-3 g++-5_5.4.0-4 gcc_4:5.3.1-3 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5_5.4.0-4 gcc-5-base_5.4.0-4 gcc-6-base_6.1.1-1+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gfortran_4:5.3.1-3 gfortran-5_5.4.0-4 gnupg_1.4.20-6 gpgv_1.4.20-6 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-5 hostname_3.17 icu-devtools_55.1-7 init_1.36 init-system-helpers_1.36 initscripts_2.88dsf-59.7 insserv_1.14.0-5.3 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_22-1.1 libacl1_2.2.52-3 libapparmor1_2.10.95-4 libapt-pkg4.12_1.0.9.10 libapt-pkg5.0_1.2.14 libarchive-zip-perl_1.57-1 libasan1_4.9.3-14 libasan2_5.4.0-4 libatomic1_6.1.1-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.5.2-1+rpi1 libaudit1_1:2.5.2-1+rpi1 libblas-common_3.6.1-1 libblas-dev_3.6.1-1 libblas3_3.6.1-1 libblkid1_2.28-5 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.22-11 libc-dev-bin_2.22-11 libc6_2.22-11 libc6-dev_2.22-11 libcairo2_1.14.6-1+b1 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.1.1-1+rpi1 libcomerr2_1.43.1-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libcurl3_7.47.0-1 libdatrie1_0.2.10-2 libdb5.3_5.3.28-11 libdbus-1-3_1.10.8-1 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linux-libc-dev_3.18.5-1~exp1+rpi19+stretch littler_0.3.0-3 login_1:4.2-3.1 lsb-base_9.20160601+rpi1 m4_1.4.17-5 make_4.1-9 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.06-1 mawk_1.3.3-17 mount_2.28-5 multiarch-support_2.22-11 nano_2.6.0-1 ncurses-base_6.0+20160319-2 ncurses-bin_6.0+20160319-2 openssl_1.0.2h-1 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.2-1 perl-base_5.22.2-1 perl-modules-5.22_5.22.2-1 po-debconf_1.0.19 procps_2:3.3.11-3 r-base-core_3.3.1-1 r-base-dev_3.3.1-1 r-cran-acepack_1.3.3.3-2 r-cran-chron_2.3-47-1 r-cran-cluster_2.0.4-1 r-cran-codetools_0.2-14-2 r-cran-colorspace_1.2-4-1 r-cran-data.table_1.9.6-1 r-cran-dichromat_2.0.0-3 r-cran-digest_0.6.9-1 r-cran-foreign_0.8.66-2 r-cran-formula_1.2-1-1 r-cran-ggplot2_2.1.0-3 r-cran-gridextra_2.2.1-1 r-cran-gtable_0.1.2-1.1 r-cran-hmisc_3.17-4-1 r-cran-labeling_0.3-1 r-cran-lattice_0.20-33-1 r-cran-latticeextra_0.6-28-2 r-cran-littler_0.3.0-3 r-cran-magrittr_1.5-3 r-cran-mass_7.3-45-1 r-cran-matrix_1.2-6-1 r-cran-matrixmodels_0.4-1-1 r-cran-multcomp_1.4-5-1 r-cran-munsell_0.4.2-1 r-cran-mvtnorm_1.0-5-2 r-cran-nlme_3.1.128-2 r-cran-nnet_7.3-12-1 r-cran-pkgkitten_0.1.3-1 r-cran-plyr_1.8.3-2 r-cran-polspline_1.1.12-2 r-cran-proto_0.3-10-1 r-cran-quantreg_5.26-1 r-cran-rcolorbrewer_1.1-2-1 r-cran-rcpp_0.12.5-1 r-cran-reshape2_1.4-1 r-cran-rpart_4.1-10-1 r-cran-sandwich_2.3-4-2 r-cran-scales_0.3.0-1 r-cran-sparsem_1.7-1 r-cran-stringi_1.0-1-1 r-cran-stringr_1.0.0-1 r-cran-survival_2.39-5-1 r-cran-th.data_1.0-7-2 r-cran-zoo_1.7-13-1 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-rms-dummy_0.invalid.0 sed_4.2.2-7.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_230-5 systemd-sysv_230-5 sysv-rc_2.88dsf-59.7 sysvinit-utils_2.88dsf-59.7 tar_1.29-1+rpi1 tzdata_2016e-1 ucf_3.0036 udev_230-5 unzip_6.0-20 util-linux_2.28-5 x11-common_1:7.7+15 xdg-utils_1.1.1-1 xz-utils_5.1.1alpha+20120614-2.1 zip_3.0-11 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu Jul 7 10:36:01 2016 UTC using RSA key ID AB99A21A
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./r-cran-rms_4.5-0-2.dsc
dpkg-source: info: extracting r-cran-rms in r-cran-rms-4.5-0
dpkg-source: info: unpacking r-cran-rms_4.5-0.orig.tar.gz
dpkg-source: info: applying r-cran-rms_4.5-0-2.diff.gz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-77d34f65-966b-4dc3-897b-92ee757c2d5c
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-rms
dpkg-buildpackage: info: source version 4.5-0-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build r-cran-rms-4.5-0
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
/usr/bin/make -f debian/rules reverse-config
make[1]: Entering directory '/<<PKGBUILDDIR>>'
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
make[1]: 'reverse-config' is up to date.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "reverse-patches" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
for dir in debian/patches ; do \
rm -f $dir/*.log ; \
done
dh_clean
if test -d src; then \
find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
debian/rules build-arch
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
make[1]: Entering directory '/<<PKGBUILDDIR>>'
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
make[1]: 'reverse-config' is up to date.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
make[1]: Entering directory '/<<PKGBUILDDIR>>'
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
make[1]: 'update-config' is up to date.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
fakeroot debian/rules binary-arch
CDBS WARNING: simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
dh_prep
dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
echo "R:Depends=r-base-core (>= 3.3.1-1), r-api-3" >> debian/r-cran-rms.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library --clean \
. \
"--built-timestamp=\"Thu, 07 Jul 2016 05:34:53 -0500\"" \
; \
else \
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library \
--clean . \
"--built-timestamp=\"Thu, 07 Jul 2016 05:34:53 -0500\"" \
; \
fi
* installing *source* package 'rms' ...
** package 'rms' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gfortran -fpic -g -O2 -fstack-protector-strong -c lrmfit.f -o lrmfit.o
gfortran -fpic -g -O2 -fstack-protector-strong -c mlmats.f -o mlmats.o
gfortran -fpic -g -O2 -fstack-protector-strong -c ormuv.f -o ormuv.o
gfortran -fpic -g -O2 -fstack-protector-strong -c robcovf.f -o robcovf.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o rms.so lrmfit.o mlmats.o ormuv.o robcovf.o -lgfortran -lm -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/libs
** R
** demo
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (rms)
rm -vf /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/R.css \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/COPYING \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/LICENSE.txt \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/lib/R/site-library/rms/LICENSE
if test -f debian/overrides; then \
install -d /<<PKGBUILDDIR>>/debian/r-cran-rms/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
/<<PKGBUILDDIR>>/debian/r-cran-rms/usr/share/lintian/overrides/r-cran-rms; \
fi
Adding cdbs dependencies to debian/r-cran-rms.substvars
dh_installdirs -pr-cran-rms \
dh_installdocs -pr-cran-rms ./NEWS
dh_installexamples -pr-cran-rms
dh_installman -pr-cran-rms
dh_installinfo -pr-cran-rms
dh_installmenu -pr-cran-rms
dh_installcron -pr-cran-rms
dh_installinit -pr-cran-rms
dh_installdebconf -pr-cran-rms
dh_installemacsen -pr-cran-rms
dh_installcatalogs -pr-cran-rms
dh_installpam -pr-cran-rms
dh_installlogrotate -pr-cran-rms
dh_installlogcheck -pr-cran-rms
dh_installchangelogs -pr-cran-rms
dh_installudev -pr-cran-rms
dh_lintian -pr-cran-rms
dh_bugfiles -pr-cran-rms
dh_install -pr-cran-rms
dh_link -pr-cran-rms
dh_installmime -pr-cran-rms
dh_installgsettings -pr-cran-rms
dh_strip -pr-cran-rms
dh_strip_nondeterminism -pr-cran-rms
dh_compress -pr-cran-rms
dh_fixperms -pr-cran-rms
dh_makeshlibs -pr-cran-rms
dh_installdeb -pr-cran-rms
dh_perl -pr-cran-rms
dh_shlibdeps -pr-cran-rms
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-cran-rms/usr/lib/R/site-library/rms/libs/rms.so was not linked against libgfortran.so.3 (it uses none of the library's symbols)
dh_gencontrol -pr-cran-rms
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -pr-cran-rms
dh_builddeb -pr-cran-rms
dpkg-deb: building package 'r-cran-rms-dbgsym' in '../r-cran-rms-dbgsym_4.5-0-2_armhf.deb'.
dpkg-deb: building package 'r-cran-rms' in '../r-cran-rms_4.5-0-2_armhf.deb'.
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-cran-rms_4.5-0-2_armhf.changes
dpkg-genchanges: warning: package r-cran-rms-dbgsym listed in files list but not in control info
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build r-cran-rms-4.5-0
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160713-0648
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-rms_4.5-0-2_armhf.changes:
---------------------------------
Format: 1.8
Date: Thu, 07 Jul 2016 05:34:53 -0500
Source: r-cran-rms
Binary: r-cran-rms
Architecture: armhf
Version: 4.5-0-2
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description:
r-cran-rms - GNU R regression modeling strategies by Frank Harrell
Closes: 829688
Changes:
r-cran-rms (4.5-0-2) unstable; urgency=medium
.
* debian/compat: Created (Closes: #829688)
.
* debian/control: Set Build-Depends: to current R version
* debian/control: Set Standards-Version: to current version
Checksums-Sha1:
caf16312dd494fa262bf933d4fc57826672de114 15748 r-cran-rms-dbgsym_4.5-0-2_armhf.deb
89ffbc2f63abca69d3a752d597845e855c8dfbd7 1060538 r-cran-rms_4.5-0-2_armhf.deb
Checksums-Sha256:
d7e0d0948175b0d335b16d52aba003bb00b3594131bcd8c70323fbea019a757c 15748 r-cran-rms-dbgsym_4.5-0-2_armhf.deb
9b6f5c43075c71a78bcc569e9708de6b60a716afcf31a2bb81642a46961425e9 1060538 r-cran-rms_4.5-0-2_armhf.deb
Files:
1873cf766137fa82021ed8add4b1b253 15748 debug extra r-cran-rms-dbgsym_4.5-0-2_armhf.deb
3b3695c2b003da18334e70584f91080c 1060538 gnu-r optional r-cran-rms_4.5-0-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-rms-dbgsym_4.5-0-2_armhf.deb
-----------------------------------
new debian package, version 2.0.
size 15748 bytes: control archive=488 bytes.
398 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: r-cran-rms-dbgsym
Source: r-cran-rms
Version: 4.5-0-2
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 29
Depends: r-cran-rms (= 4.5-0-2)
Section: debug
Priority: extra
Homepage: http://biostat.mc.vanderbilt.edu/wiki/Main/Rrms
Description: Debug symbols for r-cran-rms
Auto-Built-Package: debug-symbols
Build-Ids: 8477850e29a4ecbf2a80c4616c3805d62c7a7f53
drwxr-xr-x root/root 0 2016-07-13 06:48 ./
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/lib/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/lib/debug/.build-id/84/
-rw-r--r-- root/root 18504 2016-07-13 06:48 ./usr/lib/debug/.build-id/84/77850e29a4ecbf2a80c4616c3805d62c7a7f53.debug
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/share/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-07-13 06:48 ./usr/share/doc/r-cran-rms-dbgsym -> r-cran-rms
r-cran-rms_4.5-0-2_armhf.deb
----------------------------
new debian package, version 2.0.
size 1060538 bytes: control archive=1777 bytes.
1625 bytes, 28 lines control
1830 bytes, 25 lines md5sums
Package: r-cran-rms
Version: 4.5-0-2
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 1155
Depends: libc6 (>= 2.4), libgfortran3 (>= 4.3), r-base-core (>= 3.3.1-1), r-api-3, r-cran-hmisc (>= 3.17-3), r-cran-survival (>= 2.36-3), r-cran-sparsem, r-cran-quantreg, r-cran-nlme, r-cran-rpart, r-cran-polspline, r-cran-multcomp, r-cran-foreign, r-cran-nnet, r-cran-ggplot2, r-cran-gridextra
Conflicts: r-noncran-design
Replaces: r-noncran-design
Section: gnu-r
Priority: optional
Homepage: http://biostat.mc.vanderbilt.edu/wiki/Main/Rrms
Description: GNU R regression modeling strategies by Frank Harrell
Regression modeling, testing, estimation, validation, graphics,
prediction, and typesetting by storing enhanced model design
attributes in the fit. rms is a collection of 229 functions that
assist with and streamline modeling. It also contains functions for
binary and ordinal logistic regression models and the Buckley-James
multiple regression model for right-censored responses, and implements
penalized maximum likelihood estimation for logistic and ordinary
linear models. rms works with almost any regression model, but it
was especially written to work with binary or ordinal logistic
regression, Cox regression, accelerated failure time models,
ordinary linear models, the Buckley-James model, generalized least
squares for serially or spatially correlated observations, generalized
linear models, and quantile regression.
.
See Frank Harrell (2001), Regression Modeling Strategies, Springer
Series in Statistics, as well as http://biostat.mc.vanderbilt.edu/Rrms.
drwxr-xr-x root/root 0 2016-07-13 06:48 ./
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/lib/R/site-library/
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/site-library/rms/
-rw-r--r-- root/root 1607 2016-07-13 06:47 ./usr/lib/R/site-library/rms/DESCRIPTION
-rw-r--r-- root/root 4914 2016-07-13 06:47 ./usr/lib/R/site-library/rms/INDEX
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/
-rw-r--r-- root/root 4148 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/Rd.rds
-rw-r--r-- root/root 120 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/demo.rds
-rw-r--r-- root/root 4216 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/hsearch.rds
-rw-r--r-- root/root 1918 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/links.rds
-rw-r--r-- root/root 1995 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/nsInfo.rds
-rw-r--r-- root/root 1370 2016-07-13 06:47 ./usr/lib/R/site-library/rms/Meta/package.rds
-rw-r--r-- root/root 5740 2016-07-13 06:47 ./usr/lib/R/site-library/rms/NAMESPACE
-rw-r--r-- root/root 33472 2016-07-13 06:47 ./usr/lib/R/site-library/rms/NEWS
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/site-library/rms/R/
-rw-r--r-- root/root 1056 2016-07-13 06:47 ./usr/lib/R/site-library/rms/R/rms
-rw-r--r-- root/root 292737 2016-07-13 06:47 ./usr/lib/R/site-library/rms/R/rms.rdb
-rw-r--r-- root/root 3185 2016-07-13 06:47 ./usr/lib/R/site-library/rms/R/rms.rdx
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/site-library/rms/demo/
-rw-r--r-- root/root 17113 2016-07-13 06:47 ./usr/lib/R/site-library/rms/demo/all.R
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/site-library/rms/help/
-rw-r--r-- root/root 4886 2016-07-13 06:47 ./usr/lib/R/site-library/rms/help/AnIndex
-rw-r--r-- root/root 1811 2016-07-13 06:47 ./usr/lib/R/site-library/rms/help/aliases.rds
-rw-r--r-- root/root 625 2016-07-13 06:47 ./usr/lib/R/site-library/rms/help/paths.rds
-rw-r--r-- root/root 697998 2016-07-13 06:47 ./usr/lib/R/site-library/rms/help/rms.rdb
-rw-r--r-- root/root 1627 2016-07-13 06:47 ./usr/lib/R/site-library/rms/help/rms.rdx
drwxr-xr-x root/root 0 2016-07-13 06:47 ./usr/lib/R/site-library/rms/html/
-rw-r--r-- root/root 33215 2016-07-13 06:47 ./usr/lib/R/site-library/rms/html/00Index.html
-rw-r--r-- root/root 1335 2016-07-13 06:47 ./usr/lib/R/site-library/rms/html/R.css
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/lib/R/site-library/rms/libs/
-rw-r--r-- root/root 21908 2016-07-13 06:48 ./usr/lib/R/site-library/rms/libs/rms.so
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/share/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-07-13 06:48 ./usr/share/doc/r-cran-rms/
-rw-r--r-- root/root 12041 2016-04-02 19:41 ./usr/share/doc/r-cran-rms/NEWS.gz
-rw-r--r-- root/root 2281 2016-07-13 06:46 ./usr/share/doc/r-cran-rms/changelog.Debian.gz
-rw-r--r-- root/root 2182 2016-07-13 06:46 ./usr/share/doc/r-cran-rms/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 4272
Build-Time: 116
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 725
Job: r-cran-rms_4.5-0-2
Machine Architecture: armhf
Package: r-cran-rms
Package-Time: 882
Source-Version: 4.5-0-2
Space: 4272
Status: successful
Version: 4.5-0-2
--------------------------------------------------------------------------------
Finished at 20160713-0648
Build needed 00:14:42, 4272k disc space