r-cran-rms →
4.0-0-1 →
armhf → 2013-09-19 13:26:11
sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on testwandboard
╔══════════════════════════════════════════════════════════════════════════════╗
║ r-cran-rms 4.0-0-1 (armhf) 19 Sep 2013 13:16 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-cran-rms
Version: 4.0-0-1
Source Version: 4.0-0-1
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/r-cran-rms-U9GYHi/r-cran-rms-4.0-0' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/r-cran-rms-U9GYHi' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-e4c5de9a-15fd-4c8a-adef-817c1aa5e6ab' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1 jessie-staging Release.gpg [490 B]
Get:2 http://172.17.0.1 jessie-staging Release [10.8 kB]
Get:3 http://172.17.0.1 jessie-staging/main Sources [6896 kB]
Get:4 http://172.17.0.1 jessie-staging/main armhf Packages [8008 kB]
Ign http://172.17.0.1 jessie-staging/main Translation-en
Fetched 14.9 MB in 1min 12s (206 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
─────────
Checking available source versions...
Download source files with APT
──────────────────────────────
Reading package lists...
Building dependency tree...
Reading state information...
Need to get 400 kB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main r-cran-rms 4.0-0-1 (dsc) [1167 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main r-cran-rms 4.0-0-1 (tar) [396 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main r-cran-rms 4.0-0-1 (diff) [3331 B]
Fetched 400 kB in 0s (425 kB/s)
Download complete and in download only mode
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-MErAKx/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 5 not upgraded.
Need to get 0 B/706 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 11274 files and directories currently installed.)
Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7.0.0), r-base-dev (>= 3.0.1), cdbs, r-cran-hmisc (>= 3.12-2), r-cran-survival (>= 2.36-3), r-cran-sparsem
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7.0.0), r-base-dev (>= 3.0.1), cdbs, r-cran-hmisc (>= 3.12-2), r-cran-survival (>= 2.36-3), r-cran-sparsem
dpkg-deb: building package `sbuild-build-depends-r-cran-rms-dummy' in `/«BUILDDIR»/resolver-kmCr98/apt_archive/sbuild-build-depends-r-cran-rms-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install r-cran-rms build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
libtiff5 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev
r-cran-chron r-cran-cluster r-cran-formula r-cran-hmisc r-cran-lattice
r-cran-rpart r-cran-sparsem r-cran-survival tcl8.5 tk8.5 ttf-dejavu-core ucf
unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation devscripts dh-make gettext-doc
gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tcl-tclreadline gvfs-bin
Recommended packages:
autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
libtiff5 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev
r-cran-chron r-cran-cluster r-cran-formula r-cran-hmisc r-cran-lattice
r-cran-rpart r-cran-sparsem r-cran-survival
sbuild-build-depends-r-cran-rms-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
x11-common xdg-utils zip zlib1g-dev
0 upgraded, 90 newly installed, 0 to remove and 5 not upgraded.
Need to get 61.6 MB/61.6 MB of archives.
After this operation, 117 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ jessie-staging/main libpipeline1 armhf 1.2.4-1 [36.9 kB]
Get:2 http://172.17.0.1/private/ jessie-staging/main groff-base armhf 1.22.2-3 [666 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main bsdmainutils armhf 9.0.5 [206 kB]
Get:4 http://172.17.0.1/private/ jessie-staging/main man-db armhf 2.6.5-2 [949 kB]
Get:5 http://172.17.0.1/private/ jessie-staging/main libasprintf0c2 armhf 0.18.3.1-1 [29.4 kB]
Get:6 http://172.17.0.1/private/ jessie-staging/main libmagic1 armhf 1:5.14-2 [213 kB]
Get:7 http://172.17.0.1/private/ jessie-staging/main libxml2 armhf 2.9.1+dfsg1-3 [836 kB]
Get:8 http://172.17.0.1/private/ jessie-staging/main libexpat1 armhf 2.1.0-4 [117 kB]
Get:9 http://172.17.0.1/private/ jessie-staging/main libfreetype6 armhf 2.4.9-1.1 [401 kB]
Get:10 http://172.17.0.1/private/ jessie-staging/main ucf all 3.0027+nmu1 [70.6 kB]
Get:11 http://172.17.0.1/private/ jessie-staging/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
Get:12 http://172.17.0.1/private/ jessie-staging/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
Get:13 http://172.17.0.1/private/ jessie-staging/main fontconfig-config all 2.10.2-2 [251 kB]
Get:14 http://172.17.0.1/private/ jessie-staging/main libfontconfig1 armhf 2.10.2-2 [306 kB]
Get:15 http://172.17.0.1/private/ jessie-staging/main libpixman-1-0 armhf 0.30.2-1 [446 kB]
Get:16 http://172.17.0.1/private/ jessie-staging/main libpng12-0 armhf 1.2.49-4 [179 kB]
Get:17 http://172.17.0.1/private/ jessie-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:18 http://172.17.0.1/private/ jessie-staging/main libxdmcp6 armhf 1:1.1.1-1 [24.6 kB]
Get:19 http://172.17.0.1/private/ jessie-staging/main libxcb1 armhf 1.9.1-3 [43.3 kB]
Get:20 http://172.17.0.1/private/ jessie-staging/main libx11-data all 2:1.6.1-1 [125 kB]
Get:21 http://172.17.0.1/private/ jessie-staging/main libx11-6 armhf 2:1.6.1-1 [861 kB]
Get:22 http://172.17.0.1/private/ jessie-staging/main libxcb-render0 armhf 1.9.1-3 [16.8 kB]
Get:23 http://172.17.0.1/private/ jessie-staging/main libxcb-shm0 armhf 1.9.1-3 [10.4 kB]
Get:24 http://172.17.0.1/private/ jessie-staging/main libxext6 armhf 2:1.3.2-1 [51.1 kB]
Get:25 http://172.17.0.1/private/ jessie-staging/main libxrender1 armhf 1:0.9.8-1 [30.4 kB]
Get:26 http://172.17.0.1/private/ jessie-staging/main libcairo2 armhf 1.12.14-4 [936 kB]
Get:27 http://172.17.0.1/private/ jessie-staging/main libffi6 armhf 3.0.13-4 [19.8 kB]
Get:28 http://172.17.0.1/private/ jessie-staging/main libglib2.0-0 armhf 2.36.4-1 [1907 kB]
Get:29 http://172.17.0.1/private/ jessie-staging/main libcroco3 armhf 0.6.8-2 [119 kB]
Get:30 http://172.17.0.1/private/ jessie-staging/main libdatrie1 armhf 0.2.6-2 [27.0 kB]
Get:31 http://172.17.0.1/private/ jessie-staging/main libgfortran3 armhf 4.8.1-6+rpi1 [229 kB]
Get:32 http://172.17.0.1/private/ jessie-staging/main libgraphite2-3 armhf 1.2.3-1 [55.0 kB]
Get:33 http://172.17.0.1/private/ jessie-staging/main libharfbuzz0a armhf 0.9.19-1 [432 kB]
Get:34 http://172.17.0.1/private/ jessie-staging/main x11-common all 1:7.7+3 [284 kB]
Get:35 http://172.17.0.1/private/ jessie-staging/main libice6 armhf 2:1.0.8-2 [56.2 kB]
Get:36 http://172.17.0.1/private/ jessie-staging/main libjpeg8 armhf 8d-1 [132 kB]
Get:37 http://172.17.0.1/private/ jessie-staging/main libthai-data all 0.1.19-2 [156 kB]
Get:38 http://172.17.0.1/private/ jessie-staging/main libthai0 armhf 0.1.19-2 [40.5 kB]
Get:39 http://172.17.0.1/private/ jessie-staging/main fontconfig armhf 2.10.2-2 [374 kB]
Get:40 http://172.17.0.1/private/ jessie-staging/main libpango-1.0-0 armhf 1.32.5-5 [251 kB]
Get:41 http://172.17.0.1/private/ jessie-staging/main libpangoft2-1.0-0 armhf 1.32.5-5 [186 kB]
Get:42 http://172.17.0.1/private/ jessie-staging/main libpangocairo-1.0-0 armhf 1.32.5-5 [176 kB]
Get:43 http://172.17.0.1/private/ jessie-staging/main libpaper1 armhf 1.1.24+nmu2 [20.9 kB]
Get:44 http://172.17.0.1/private/ jessie-staging/main libpcrecpp0 armhf 1:8.31-2 [125 kB]
Get:45 http://172.17.0.1/private/ jessie-staging/main libsm6 armhf 2:1.2.1-2 [32.5 kB]
Get:46 http://172.17.0.1/private/ jessie-staging/main libjbig0 armhf 2.0-2 [31.5 kB]
Get:47 http://172.17.0.1/private/ jessie-staging/main libtiff5 armhf 4.0.3-4 [226 kB]
Get:48 http://172.17.0.1/private/ jessie-staging/main libunistring0 armhf 0.9.3-5 [408 kB]
Get:49 http://172.17.0.1/private/ jessie-staging/main libxft2 armhf 2.3.1-1 [55.4 kB]
Get:50 http://172.17.0.1/private/ jessie-staging/main libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:51 http://172.17.0.1/private/ jessie-staging/main libxt6 armhf 1:1.1.4-1 [183 kB]
Get:52 http://172.17.0.1/private/ jessie-staging/main file armhf 1:5.14-2 [53.8 kB]
Get:53 http://172.17.0.1/private/ jessie-staging/main gettext-base armhf 0.18.3.1-1 [136 kB]
Get:54 http://172.17.0.1/private/ jessie-staging/main cdbs all 0.4.122 [81.4 kB]
Get:55 http://172.17.0.1/private/ jessie-staging/main gettext armhf 0.18.3.1-1 [1837 kB]
Get:56 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:57 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu2 [223 kB]
Get:58 http://172.17.0.1/private/ jessie-staging/main debhelper all 9.20130720 [671 kB]
Get:59 http://172.17.0.1/private/ jessie-staging/main gfortran-4.6 armhf 4.6.4-2+rpi1 [4757 kB]
Get:60 http://172.17.0.1/private/ jessie-staging/main gfortran armhf 4:4.6.3-8 [1134 B]
Get:61 http://172.17.0.1/private/ jessie-staging/main libblas3 armhf 1.2.20110419-5 [201 kB]
Get:62 http://172.17.0.1/private/ jessie-staging/main libblas-dev armhf 1.2.20110419-5 [206 kB]
Get:63 http://172.17.0.1/private/ jessie-staging/main libbz2-dev armhf 1.0.6-5 [33.8 kB]
Get:64 http://172.17.0.1/private/ jessie-staging/main libjpeg8-dev armhf 8d-1 [238 kB]
Get:65 http://172.17.0.1/private/ jessie-staging/main liblapack3 armhf 3.4.2+dfsg-1 [3584 kB]
Get:66 http://172.17.0.1/private/ jessie-staging/main liblapack-dev armhf 3.4.2+dfsg-1 [3890 kB]
Get:67 http://172.17.0.1/private/ jessie-staging/main libtinfo-dev armhf 5.9+20130608-1 [92.5 kB]
Get:68 http://172.17.0.1/private/ jessie-staging/main libncurses5-dev armhf 5.9+20130608-1 [201 kB]
Get:69 http://172.17.0.1/private/ jessie-staging/main libpaper-utils armhf 1.1.24+nmu2 [17.9 kB]
Get:70 http://172.17.0.1/private/ jessie-staging/main libpcre3-dev armhf 1:8.31-2 [350 kB]
Get:71 http://172.17.0.1/private/ jessie-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-1 [212 kB]
Get:72 http://172.17.0.1/private/ jessie-staging/main libpng12-dev armhf 1.2.49-4 [260 kB]
Get:73 http://172.17.0.1/private/ jessie-staging/main libreadline6-dev armhf 6.2+dfsg-0.1 [164 kB]
Get:74 http://172.17.0.1/private/ jessie-staging/main libreadline-dev armhf 6.2+dfsg-0.1 [898 B]
Get:75 http://172.17.0.1/private/ jessie-staging/main zip armhf 3.0-7 [333 kB]
Get:76 http://172.17.0.1/private/ jessie-staging/main unzip armhf 6.0-9 [193 kB]
Get:77 http://172.17.0.1/private/ jessie-staging/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
Get:78 http://172.17.0.1/private/ jessie-staging/main tcl8.5 armhf 8.5.14-2 [1579 kB]
Get:79 http://172.17.0.1/private/ jessie-staging/main tk8.5 armhf 8.5.14-2 [1123 kB]
Get:80 http://172.17.0.1/private/ jessie-staging/main r-base-core armhf 3.0.1-6 [21.2 MB]
Get:81 http://172.17.0.1/private/ jessie-staging/main r-base-dev all 3.0.1-6 [3898 B]
Get:82 http://172.17.0.1/private/ jessie-staging/main r-cran-chron armhf 2.3-44-1 [102 kB]
Get:83 http://172.17.0.1/private/ jessie-staging/main r-cran-cluster armhf 1.14.4-1 [470 kB]
Get:84 http://172.17.0.1/private/ jessie-staging/main r-cran-formula all 1.1-1-1 [158 kB]
Get:85 http://172.17.0.1/private/ jessie-staging/main r-cran-lattice armhf 0.20-23-1 [726 kB]
Get:86 http://172.17.0.1/private/ jessie-staging/main r-cran-survival armhf 2.37-4-2 [1836 kB]
Get:87 http://172.17.0.1/private/ jessie-staging/main r-cran-rpart armhf 4.1-3-1 [877 kB]
Get:88 http://172.17.0.1/private/ jessie-staging/main r-cran-hmisc armhf 3.12-2-2 [1454 kB]
Get:89 http://172.17.0.1/private/ jessie-staging/main r-cran-sparsem armhf 1.03-1 [766 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up tcl8.5 (8.5.14-2) ...
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Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
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Setting up r-cran-chron (2.3-44-1) ...
Setting up r-cran-cluster (1.14.4-1) ...
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Setting up r-cran-lattice (0.20-23-1) ...
Setting up r-cran-survival (2.37-4-2) ...
Setting up r-cran-rpart (4.1-3-1) ...
Setting up r-cran-hmisc (3.12-2-2) ...
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Processing triggers for libc-bin ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.11.0-armv7-x13 armhf (armv7l)
Toolchain package versions: binutils_2.23.52.20130612-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-2+rpi1 gcc-4.6_4.6.4-2+rpi1 libc6-dev_2.17-7+rpi1+b1 libstdc++6_4.8.1-6+rpi1 libstdc++6-4.6-dev_4.6.4-2+rpi1 linux-libc-dev_3.10.1-1+rpi1+b1
Package versions: apt_0.9.7.8+rpi1 base-files_7.2+rpi1 base-passwd_3.5.28 bash_4.2+dfsg-1 binutils_2.23.52.20130612-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-5 cdbs_0.4.122 coreutils_8.21-1 cpio_2.11+dfsg-1 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2+rpi1 dash_0.5.7-3 debconf_1.5.51 debfoster_2.7-1.2 debhelper_9.20130720 debianutils_4.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.8-1 e2fsprogs_1.42.8-1 fakeroot_1.18.4-2 file_1:5.14-2 findutils_4.4.2-6 fontconfig_2.10.2-2 fontconfig-config_2.10.2-2 fonts-dejavu-core_2.33+svn2514-3 g++_4:4.6.3-8 g++-4.6_4.6.4-2+rpi1 gcc_4:4.6.3-8 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-2+rpi1 gcc-4.6-base_4.6.4-2+rpi1 gcc-4.7-base_4.7.3-4+rpi1 gcc-4.8-base_4.8.1-6+rpi1 gettext_0.18.3.1-1 gettext-base_0.18.3.1-1 gfortran_4:4.6.3-8 gfortran-4.6_4.6.4-2+rpi1 gnupg_1.4.14-1 gpgv_1.4.14-1 grep_2.14-3 groff-base_1.22.2-3 gzip_1.6-2 hostname_3.13 initramfs-tools_0.113 initscripts_2.88dsf-43 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 klibc-utils_2.0.1-3.1+rpi1 kmod_9-3 libacl1_2.2.52-1 libapt-pkg4.12_0.9.7.8+rpi1 libarchive-extract-perl_0.68-1 libasprintf0c2_0.18.3.1-1 libattr1_1:2.4.47-1 libblas-dev_1.2.20110419-5 libblas3_1.2.20110419-5 libblkid1_2.20.1-5.5 libbz2-1.0_1.0.6-5 libbz2-dev_1.0.6-5 libc-bin_2.17-7+rpi1+b1 libc-dev-bin_2.17-7+rpi1+b1 libc6_2.17-7+rpi1+b1 libc6-dev_2.17-7+rpi1+b1 libcairo2_1.12.14-4 libcap2_1:2.22-1.2 libclass-isa-perl_0.36-5 libcomerr2_1.42.8-1 libcroco3_0.6.8-2 libdatrie1_0.2.6-2 libdb5.1_5.1.29-6 libdbus-1-3_1.6.12-1 libdpkg-perl_1.16.10 libexpat1_2.1.0-4 libffi6_3.0.13-4 libfontconfig1_2.10.2-2 libfreetype6_2.4.9-1.1 libgc1c2_1:7.2d-5 libgcc1_1:4.8.1-6+rpi1 libgdbm3_1.8.3-12 libgfortran3_4.8.1-6+rpi1 libglib2.0-0_2.36.4-1 libgmp10_2:5.1.2+dfsg-2 libgomp1_4.8.1-6+rpi1 libgraphite2-3_1.2.3-1 libharfbuzz0a_0.9.19-1 libice6_2:1.0.8-2 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libklibc_2.0.1-3.1+rpi1 libkmod2_9-3 liblapack-dev_3.4.2+dfsg-1 liblapack3_3.4.2+dfsg-1 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.14-2 libmodule-pluggable-perl_4.7-1 libmount1_2.20.1-5.5 libmpc3_1.0.1-1 libmpfr4_3.1.1-1 libncurses5_5.9+20130608-1 libncurses5-dev_5.9+20130608-1 libncursesw5_5.9+20130608-1 libnih-dbus1_1.0.3-4.1+b1 libnih1_1.0.3-4.1+b1 libpam-modules_1.1.3-9 libpam-modules-bin_1.1.3-9 libpam-runtime_1.1.3-9 libpam0g_1.1.3-9 libpango-1.0-0_1.32.5-5 libpangocairo-1.0-0_1.32.5-5 libpangoft2-1.0-0_1.32.5-5 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.31-2 libpcre3-dev_1:8.31-2 libpcrecpp0_1:8.31-2 libpipeline1_1.2.4-1 libpixman-1-0_0.30.2-1 libpng12-0_1.2.49-4 libpng12-dev_1.2.49-4 libpod-latex-perl_0.61-1 libprocps0_1:3.3.4-2 libreadline-dev_6.2+dfsg-0.1 libreadline6_6.2+dfsg-0.1 libreadline6-dev_6.2+dfsg-0.1 libselinux1_2.1.13-2 libsemanage-common_2.1.10-2 libsemanage1_2.1.10-2 libsepol1_2.1.9-2 libslang2_2.2.4-15 libsm6_2:1.2.1-2 libss2_1.42.8-1 libstdc++6_4.8.1-6+rpi1 libstdc++6-4.6-dev_4.6.4-2+rpi1 libswitch-perl_2.16-2 libterm-ui-perl_0.36-1 libthai-data_0.1.19-2 libthai0_0.1.19-2 libtiff5_4.0.3-4 libtimedate-perl_1.2000-1 libtinfo-dev_5.9+20130608-1 libtinfo5_5.9+20130608-1 libudev0_175-7.2 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23.2 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.5 libx11-6_2:1.6.1-1 libx11-data_2:1.6.1-1 libxau6_1:1.0.8-1 libxcb-render0_1.9.1-3 libxcb-shm0_1.9.1-3 libxcb1_1.9.1-3 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.2-1 libxft2_2.3.1-1 libxml2_2.9.1+dfsg1-3 libxrender1_1:0.9.8-1 libxss1_1:1.2.2-1 libxt6_1:1.1.4-1 linux-libc-dev_3.10.1-1+rpi1+b1 login_1:4.1.5.1-1 lsb-base_4.1+Debian8+rpi1 make_3.81-8.2 makedev_2.3.1-93 man-db_2.6.5-2 mawk_1.3.3-17 mount_2.20.1-5.5 mountall_2.49 multiarch-support_2.17-7+rpi1+b1 ncurses-base_5.9+20130608-1 ncurses-bin_5.9+20130608-1 passwd_1:4.1.5.1-1 patch_2.7.1-3 perl_5.18.1-3 perl-base_5.18.1-3 perl-modules_5.18.1-3 plymouth_0.8.8-6+deb8u1 po-debconf_1.0.16+nmu2 procps_1:3.3.4-2 r-base-core_3.0.1-6 r-base-dev_3.0.1-6 r-cran-chron_2.3-44-1 r-cran-cluster_1.14.4-1 r-cran-formula_1.1-1-1 r-cran-hmisc_3.12-2-2 r-cran-lattice_0.20-23-1 r-cran-rpart_4.1-3-1 r-cran-sparsem_1.03-1 r-cran-survival_2.37-4-2 raspbian-archive-keyring_20120528.2 readline-common_6.2+dfsg-0.1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-rms-dummy_0.invalid.0 sed_4.2.2-2 sensible-utils_0.0.9 sysv-rc_2.88dsf-43 sysvinit_2.88dsf-43 sysvinit-utils_2.88dsf-43 tar_1.26+dfsg-8 tcl8.5_8.5.14-2 tk8.5_8.5.14-2 ttf-dejavu-core_2.33+svn2514-3 tzdata_2013d-1 ucf_3.0027+nmu1 udev_175-7.2 unzip_6.0-9 util-linux_2.20.1-5.5 x11-common_1:7.7+3 xdg-utils_1.1.0~rc1+git20111210-7 xz-utils_5.1.1alpha+20120614-2 zip_3.0-7 zlib1g_1:1.2.8.dfsg-1 zlib1g-dev_1:1.2.8.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun Sep 8 10:14:58 2013 UTC using DSA key ID 91B0D3B7
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./r-cran-rms_4.0-0-1.dsc
dpkg-source: info: extracting r-cran-rms in r-cran-rms-4.0-0
dpkg-source: info: unpacking r-cran-rms_4.0-0.orig.tar.gz
dpkg-source: info: applying r-cran-rms_4.0-0-1.diff.gz
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=POSIX
LOGNAME=root
MAIL=/var/mail/root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/root
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-e4c5de9a-15fd-4c8a-adef-817c1aa5e6ab
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
SHLVL=1
SSH_CLIENT=192.168.1.2 55816 22
SSH_CONNECTION=192.168.1.2 55816 192.168.1.46 22
SSH_TTY=/dev/pts/1
TERM=xterm
USER=root
_=/etc/init.d/buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-cran-rms
dpkg-buildpackage: source version 4.0-0-1
dpkg-source --before-build r-cran-rms-4.0-0
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
/usr/bin/make -f debian/rules reverse-config
make[1]: Entering directory `/«PKGBUILDDIR»'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
make[1]: Leaving directory `/«PKGBUILDDIR»'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "reverse-patches" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
for dir in debian/patches ; do \
rm -f $dir/*.log ; \
done
dh_clean
dh_clean: No compatibility level specified in debian/compat
dh_clean: This package will soon FTBFS; time to fix it!
dh_clean: Compatibility levels before 5 are deprecated (level 1 in use)
if test -d src; then \
find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
echo 5 >debian/compat
/usr/bin/make -f debian/rules reverse-config
make[1]: Entering directory `/«PKGBUILDDIR»'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
make[1]: Leaving directory `/«PKGBUILDDIR»'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
make[1]: Entering directory `/«PKGBUILDDIR»'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `update-config'.
make[1]: Leaving directory `/«PKGBUILDDIR»'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
dh_clean -k
dh_clean: dh_clean -k is deprecated; use dh_prep instead
dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-cran-rms.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-cran-rms/usr/lib/R/site-library --clean \
. ; \
else \
R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-cran-rms/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'rms' ...
** package 'rms' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory `/«PKGBUILDDIR»/src'
gfortran -fpic -O3 -pipe -g -c lrmfit.f -o lrmfit.o
gfortran -fpic -O3 -pipe -g -c mlmats.f -o mlmats.o
gfortran -fpic -O3 -pipe -g -c ormuv.f -o ormuv.o
gfortran -fpic -O3 -pipe -g -c robcovf.f -o robcovf.o
gcc -std=gnu99 -shared -o rms.so lrmfit.o mlmats.o ormuv.o robcovf.o -lgfortran -lm -L/usr/lib/R/lib -lR
make[1]: Leaving directory `/«PKGBUILDDIR»/src'
make[1]: Entering directory `/«PKGBUILDDIR»/src'
make[1]: Leaving directory `/«PKGBUILDDIR»/src'
installing to /«PKGBUILDDIR»/debian/r-cran-rms/usr/lib/R/site-library/rms/libs
** R
** demo
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (rms)
rm -vf /«PKGBUILDDIR»/debian/r-cran-rms/usr/lib/R/site-library/R.css \
/«PKGBUILDDIR»/debian/r-cran-rms/usr/lib/R/site-library/rms/COPYING \
/«PKGBUILDDIR»/debian/r-cran-rms/usr/lib/R/site-library/rms/LICENSE.txt
if test -f debian/overrides; then \
install -d /«PKGBUILDDIR»/debian/r-cran-rms/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
/«PKGBUILDDIR»/debian/r-cran-rms/usr/share/lintian/overrides/r-cran-rms; \
fi
Adding cdbs dependencies to debian/r-cran-rms.substvars
dh_installdirs -pr-cran-rms
dh_installdocs -pr-cran-rms ./README ./NEWS
dh_installexamples -pr-cran-rms
dh_installman -pr-cran-rms
dh_installinfo -pr-cran-rms
dh_installmenu -pr-cran-rms
dh_installcron -pr-cran-rms
dh_installinit -pr-cran-rms
dh_installdebconf -pr-cran-rms
dh_installemacsen -pr-cran-rms
dh_installcatalogs -pr-cran-rms
dh_installpam -pr-cran-rms
dh_installlogrotate -pr-cran-rms
dh_installlogcheck -pr-cran-rms
dh_installchangelogs -pr-cran-rms
dh_installudev -pr-cran-rms
dh_lintian -pr-cran-rms
dh_bugfiles -pr-cran-rms
dh_install -pr-cran-rms
dh_link -pr-cran-rms
dh_installmime -pr-cran-rms
dh_installgsettings -pr-cran-rms
dh_strip -pr-cran-rms
dh_compress -pr-cran-rms
dh_fixperms -pr-cran-rms
dh_makeshlibs -pr-cran-rms
dh_installdeb -pr-cran-rms
dh_perl -pr-cran-rms
dh_shlibdeps -pr-cran-rms
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-cran-rms/usr/lib/R/site-library/rms/libs/rms.so was not linked against libgfortran.so.3 (it uses none of the library's symbols)
dh_gencontrol -pr-cran-rms
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -pr-cran-rms
dh_builddeb -pr-cran-rms
dpkg-deb: building package `r-cran-rms' in `../r-cran-rms_4.0-0-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-cran-rms_4.0-0-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build r-cran-rms-4.0-0
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20130919-1326
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
r-cran-rms_4.0-0-1_armhf.changes:
─────────────────────────────────
Format: 1.8
Date: Sat, 07 Sep 2013 19:05:26 -0500
Source: r-cran-rms
Binary: r-cran-rms
Architecture: armhf
Version: 4.0-0-1
Distribution: jessie-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description:
r-cran-rms - GNU R regression modeling strategies by Frank Harrell
Changes:
r-cran-rms (4.0-0-1) unstable; urgency=low
.
* New upstream release
.
* debian/control: Update (Build-)Depends: on r-cran-hmisc to (>= 3.12-2)
as the Formula package is in the archive and Hmisc has been updated
* debian/control: Add new (Build-)Depends on r-cran-sparsem now that this
package has been added to Debian as well
* debian/control: Update (Build-)Depends: to current R version
Checksums-Sha1:
9c98d22c5d39c2f735ece32b8d95a09504c61849 1006158 r-cran-rms_4.0-0-1_armhf.deb
Checksums-Sha256:
eec950a8215b33a41beca47abc2c2e3050d02991c08913ee2be2cb56bc4b02ec 1006158 r-cran-rms_4.0-0-1_armhf.deb
Files:
14dce8424f5782b8e106f279893cd6c8 1006158 gnu-r optional r-cran-rms_4.0-0-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
r-cran-rms_4.0-0-1_armhf.deb
────────────────────────────
new debian package, version 2.0.
size 1006158 bytes: control archive=1734 bytes.
1474 bytes, 28 lines control
1896 bytes, 26 lines md5sums
Package: r-cran-rms
Version: 4.0-0-1
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 1053
Depends: libc6 (>= 2.4), libgfortran3 (>= 4.3), r-base-core (>= 3.0.1-6), r-cran-hmisc (>= 3.12-2), r-cran-survival (>= 2.36-3), r-cran-sparsem
Conflicts: r-noncran-design
Replaces: r-noncran-design
Section: gnu-r
Priority: optional
Homepage: http://biostat.mc.vanderbilt.edu/wiki/Main/Rrms
Description: GNU R regression modeling strategies by Frank Harrell
Regression modeling, testing, estimation, validation, graphics,
prediction, and typesetting by storing enhanced model design
attributes in the fit. rms is a collection of 229 functions that
assist with and streamline modeling. It also contains functions for
binary and ordinal logistic regression models and the Buckley-James
multiple regression model for right-censored responses, and implements
penalized maximum likelihood estimation for logistic and ordinary
linear models. rms works with almost any regression model, but it
was especially written to work with binary or ordinal logistic
regression, Cox regression, accelerated failure time models,
ordinary linear models, the Buckley-James model, generalized least
squares for serially or spatially correlated observations, generalized
linear models, and quantile regression.
.
See Frank Harrell (2001), Regression Modeling Strategies, Springer
Series in Statistics, as well as http://biostat.mc.vanderbilt.edu/Rrms.
drwxr-xr-x root/root 0 2013-09-19 13:25 ./
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/R/
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/R/site-library/
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/R/site-library/rms/
-rw-r--r-- root/root 4214 2013-09-19 13:25 ./usr/lib/R/site-library/rms/NAMESPACE
-rw-r--r-- root/root 19142 2013-09-19 13:25 ./usr/lib/R/site-library/rms/NEWS
-rw-r--r-- root/root 1555 2013-09-19 13:25 ./usr/lib/R/site-library/rms/DESCRIPTION
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/
-rw-r--r-- root/root 1282 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/package.rds
-rw-r--r-- root/root 4147 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/Rd.rds
-rw-r--r-- root/root 4218 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/hsearch.rds
-rw-r--r-- root/root 1920 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/links.rds
-rw-r--r-- root/root 120 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/demo.rds
-rw-r--r-- root/root 1340 2013-09-19 13:25 ./usr/lib/R/site-library/rms/Meta/nsInfo.rds
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/R/site-library/rms/libs/
-rw-r--r-- root/root 17132 2013-09-19 13:25 ./usr/lib/R/site-library/rms/libs/rms.so
drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/lib/R/site-library/rms/R/
-rw-r--r-- root/root 1056 2013-09-19 13:25 ./usr/lib/R/site-library/rms/R/rms
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drwxr-xr-x root/root 0 2013-09-19 13:25 ./usr/share/doc/
drwxr-xr-x root/root 0 2013-09-19 13:26 ./usr/share/doc/r-cran-rms/
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 3808
Build-Time: 85
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 390
Job: r-cran-rms_4.0-0-1
Machine Architecture: armhf
Package: r-cran-rms
Package-Time: 566
Source-Version: 4.0-0-1
Space: 3808
Status: successful
Version: 4.0-0-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20130919-1326
Build needed 00:09:26, 3808k disc space