r-cran-glmmtmb →
1.1.2.3-1 →
armhf → 2021-09-28 07:25:49
sbuild (Debian sbuild) 0.78.1 (09 February 2019) on test2019
+==============================================================================+
| r-cran-glmmtmb 1.1.2.3-1 (armhf) Tue, 28 Sep 2021 06:58:31 +0000 |
+==============================================================================+
Package: r-cran-glmmtmb
Version: 1.1.2.3-1
Source Version: 1.1.2.3-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bookworm-staging-armhf-sbuild-56cdf10e-79e8-4407-882e-dd3d9dcbda0d' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/r-cran-glmmtmb-PCkhVA/resolver-ulpYEX' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bookworm-staging/main Sources [12.4 MB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf Packages [13.4 MB]
Fetched 25.8 MB in 17s (1538 kB/s)
Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-glmmtmb' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3926 kB of source archives.
Get:1 http://172.17.0.1/private bookworm-staging/main r-cran-glmmtmb 1.1.2.3-1 (dsc) [2223 B]
Get:2 http://172.17.0.1/private bookworm-staging/main r-cran-glmmtmb 1.1.2.3-1 (tar) [3911 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main r-cran-glmmtmb 1.1.2.3-1 (diff) [13.5 kB]
Fetched 3926 kB in 3s (1353 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-glmmtmb-PCkhVA/r-cran-glmmtmb-1.1.2.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-glmmtmb-PCkhVA' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-tmb, r-cran-lme4, r-cran-matrix, r-cran-nlme, r-cran-numderiv, r-cran-rcppeigen, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-tmb, r-cran-lme4, r-cran-matrix, r-cran-nlme, r-cran-numderiv, r-cran-rcppeigen, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [418 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [501 B]
Fetched 1876 B in 0s (27.1 kB/s)
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev binutils
binutils-arm-linux-gnueabihf binutils-common bsdextrautils ca-certificates
cpp-10 dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz
file fontconfig fontconfig-config fonts-dejavu-core g++-10 gcc-10
gcc-10-base gcc-11-base gettext gettext-base gfortran gfortran-10 groff-base
icu-devtools intltool-debian libalgorithm-c3-perl libarchive-zip-perl
libasan6 libatomic1 libb-hooks-endofscope-perl libb-hooks-op-check-perl
libbinutils libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2
libcc1-0 libclass-c3-perl libclass-load-perl libclass-load-xs-perl
libctf-nobfd0 libctf0 libcurl3-gnutls libcurl4 libdata-optlist-perl
libdatrie1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl
libdevel-globaldestruction-perl libdevel-overloadinfo-perl
libdevel-stacktrace-perl libdist-checkconflicts-perl
libdynaloader-functions-perl libelf1 libencode-locale-perl
libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgcc-10-dev
libgcc-s1 libgfortran-10-dev libgfortran5 libglib2.0-0 libgomp1
libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6
libicu-dev libicu67 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev liblapack-dev liblapack3 liblwp-mediatypes-perl
liblzma-dev libmagic-mgc libmagic1 libmd0 libmodule-implementation-perl
libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl
libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses5-dev
libncurses6 libncursesw6 libnghttp2-14 libnlopt0
libpackage-deprecationmanager-perl libpackage-stash-perl
libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl
libparams-util-perl libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev libreadline8
librtmp1 libsigsegv2 libsm6 libssh2-1 libstdc++-10-dev libstdc++6
libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl
libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl
libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo6 libtk8.6
libtool libtry-tiny-perl libubsan1 libuchardet0 liburi-perl
libvariable-magic-perl libwebp6 libwww-curl-perl libwww-curl-simple-perl
libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6
libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4
man-db openssl pkg-config po-debconf r-base-core r-base-dev r-cran-boot
r-cran-lattice r-cran-littler r-cran-lme4 r-cran-mass r-cran-matrix
r-cran-minqa r-cran-nlme r-cran-nloptr r-cran-numderiv r-cran-pkgkitten
r-cran-rcpp r-cran-rcppeigen r-cran-statmod r-cran-tmb sensible-utils ucf
unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales
debtags dh-make postgresql-client-common gcc-10-doc gettext-doc
libasprintf-dev libgettextpo-dev gfortran-doc gfortran-10-doc
libcoarrays-dev groff liblapack-doc icu-doc liblzma-doc ncurses-doc
libscalar-number-perl readline-doc libstdc++-10-doc tcl8.6 tk8.6 libtool-doc
gcj-jdk libwww-perl libcurl4-gnutls-dev m4-doc apparmor less www-browser
libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
texlive-base texlive-latex-base texlive-plain-generic
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-cran-getopt
r-cran-inline
Recommended packages:
devscripts cme git-buildpackage curl | wget | lynx bzip2-doc
libclass-c3-xs-perl libdevel-lexalias-perl libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs libclone-perl
libdevel-partialdump-perl libgpm2 libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core gcc-11-base gettext
gettext-base gfortran gfortran-10 groff-base icu-devtools intltool-debian
libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl
libb-hooks-op-check-perl libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev
libcairo2 libclass-c3-perl libclass-load-perl libclass-load-xs-perl
libcurl3-gnutls libcurl4 libdata-optlist-perl libdatrie1 libdebhelper-perl
libdeflate0 libdevel-callchecker-perl libdevel-globaldestruction-perl
libdevel-overloadinfo-perl libdevel-stacktrace-perl
libdist-checkconflicts-perl libdynaloader-functions-perl libelf1
libencode-locale-perl libeval-closure-perl libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-10-dev libgfortran5 libglib2.0-0
libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6
libicu-dev libicu67 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev liblapack-dev liblapack3 liblwp-mediatypes-perl
liblzma-dev libmagic-mgc libmagic1 libmd0 libmodule-implementation-perl
libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl
libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libnlopt0 libpackage-deprecationmanager-perl
libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
libparams-classify-perl libparams-util-perl libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libsub-exporter-perl
libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data
libthai0 libtiff5 libtimedate-perl libtk8.6 libtool libtry-tiny-perl
libuchardet0 liburi-perl libvariable-magic-perl libwebp6 libwww-curl-perl
libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 littler m4 man-db openssl pkg-config po-debconf r-base-core
r-base-dev r-cran-boot r-cran-lattice r-cran-littler r-cran-lme4 r-cran-mass
r-cran-matrix r-cran-minqa r-cran-nlme r-cran-nloptr r-cran-numderiv
r-cran-pkgkitten r-cran-rcpp r-cran-rcppeigen r-cran-statmod r-cran-tmb
sbuild-build-depends-main-dummy sensible-utils ucf unzip x11-common xauth
xdg-utils zip zlib1g-dev
The following packages will be upgraded:
binutils binutils-arm-linux-gnueabihf binutils-common cpp-10 g++-10 gcc-10
gcc-10-base libasan6 libatomic1 libbinutils libcc1-0 libctf-nobfd0 libctf0
libgcc-10-dev libgcc-s1 libgomp1 libncursesw6 libreadline8 libstdc++-10-dev
libstdc++6 libtinfo6 libubsan1
22 upgraded, 186 newly installed, 0 to remove and 63 not upgraded.
Need to get 143 MB of archives.
After this operation, 289 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B]
Get:2 http://172.17.0.1/private bookworm-staging/main armhf libtinfo6 armhf 6.2+20201114-4 [328 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf libncursesw6 armhf 6.2+20201114-4 [105 kB]
Get:4 http://172.17.0.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.2-1 [135 kB]
Get:5 http://172.17.0.1/private bookworm-staging/main armhf gcc-11-base armhf 11.2.0-4+rpi1 [205 kB]
Get:6 http://172.17.0.1/private bookworm-staging/main armhf libgcc-s1 armhf 11.2.0-4+rpi1 [36.2 kB]
Get:7 http://172.17.0.1/private bookworm-staging/main armhf libstdc++6 armhf 11.2.0-4+rpi1 [467 kB]
Get:8 http://172.17.0.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:9 http://172.17.0.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-7 [793 kB]
Get:10 http://172.17.0.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:11 http://172.17.0.1/private bookworm-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:12 http://172.17.0.1/private bookworm-staging/main armhf libreadline8 armhf 8.1-2 [146 kB]
Get:13 http://172.17.0.1/private bookworm-staging/main armhf libgomp1 armhf 11.2.0-4+rpi1 [87.7 kB]
Get:14 http://172.17.0.1/private bookworm-staging/main armhf libatomic1 armhf 11.2.0-4+rpi1 [8200 B]
Get:15 http://172.17.0.1/private bookworm-staging/main armhf libasan6 armhf 11.2.0-4+rpi1 [2043 kB]
Get:16 http://172.17.0.1/private bookworm-staging/main armhf libubsan1 armhf 11.2.0-4+rpi1 [795 kB]
Get:17 http://172.17.0.1/private bookworm-staging/main armhf g++-10 armhf 10.3.0-9+rpi1 [7352 kB]
Get:18 http://172.17.0.1/private bookworm-staging/main armhf libstdc++-10-dev armhf 10.3.0-9+rpi1 [1756 kB]
Get:19 http://172.17.0.1/private bookworm-staging/main armhf gcc-10 armhf 10.3.0-9+rpi1 [13.4 MB]
Get:20 http://172.17.0.1/private bookworm-staging/main armhf libgcc-10-dev armhf 10.3.0-9+rpi1 [680 kB]
Get:21 http://172.17.0.1/private bookworm-staging/main armhf libcc1-0 armhf 11.2.0-4+rpi1 [37.8 kB]
Get:22 http://172.17.0.1/private bookworm-staging/main armhf libctf0 armhf 2.37-5+rpi1 [79.5 kB]
Get:23 http://172.17.0.1/private bookworm-staging/main armhf libctf-nobfd0 armhf 2.37-5+rpi1 [138 kB]
Get:24 http://172.17.0.1/private bookworm-staging/main armhf binutils-arm-linux-gnueabihf armhf 2.37-5+rpi1 [2165 kB]
Get:25 http://172.17.0.1/private bookworm-staging/main armhf libbinutils armhf 2.37-5+rpi1 [411 kB]
Get:26 http://172.17.0.1/private bookworm-staging/main armhf binutils armhf 2.37-5+rpi1 [62.2 kB]
Get:27 http://172.17.0.1/private bookworm-staging/main armhf binutils-common armhf 2.37-5+rpi1 [2286 kB]
Get:28 http://172.17.0.1/private bookworm-staging/main armhf cpp-10 armhf 10.3.0-9+rpi1 [6692 kB]
Get:29 http://172.17.0.1/private bookworm-staging/main armhf gcc-10-base armhf 10.3.0-9+rpi1 [206 kB]
Get:30 http://172.17.0.1/private bookworm-staging/main armhf sensible-utils all 0.0.17 [21.5 kB]
Get:31 http://172.17.0.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:32 http://172.17.0.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:33 http://172.17.0.1/private bookworm-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:34 http://172.17.0.1/private bookworm-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:35 http://172.17.0.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:36 http://172.17.0.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:37 http://172.17.0.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:38 http://172.17.0.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:39 http://172.17.0.1/private bookworm-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:40 http://172.17.0.1/private bookworm-staging/main armhf automake all 1:1.16.4-2 [819 kB]
Get:41 http://172.17.0.1/private bookworm-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:42 http://172.17.0.1/private bookworm-staging/main armhf openssl armhf 1.1.1l-1 [815 kB]
Get:43 http://172.17.0.1/private bookworm-staging/main armhf ca-certificates all 20210119 [158 kB]
Get:44 http://172.17.0.1/private bookworm-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:45 http://172.17.0.1/private bookworm-staging/main armhf libdebhelper-perl all 13.5.2 [192 kB]
Get:46 http://172.17.0.1/private bookworm-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:47 http://172.17.0.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:48 http://172.17.0.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:49 http://172.17.0.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:50 http://172.17.0.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get:51 http://172.17.0.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get:52 http://172.17.0.1/private bookworm-staging/main armhf libelf1 armhf 0.185-2 [168 kB]
Get:53 http://172.17.0.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:54 http://172.17.0.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:55 http://172.17.0.1/private bookworm-staging/main armhf libxml2 armhf 2.9.12+dfsg-5 [584 kB]
Get:56 http://172.17.0.1/private bookworm-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:57 http://172.17.0.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:58 http://172.17.0.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:59 http://172.17.0.1/private bookworm-staging/main armhf debhelper all 13.5.2 [1056 kB]
Get:60 http://172.17.0.1/private bookworm-staging/main armhf zip armhf 3.0-12 [209 kB]
Get:61 http://172.17.0.1/private bookworm-staging/main armhf unzip armhf 6.0-26 [151 kB]
Get:62 http://172.17.0.1/private bookworm-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:63 http://172.17.0.1/private bookworm-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:64 http://172.17.0.1/private bookworm-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:65 http://172.17.0.1/private bookworm-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:66 http://172.17.0.1/private bookworm-staging/main armhf libexpat1 armhf 2.4.1-2 [80.3 kB]
Get:67 http://172.17.0.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:68 http://172.17.0.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:69 http://172.17.0.1/private bookworm-staging/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [353 kB]
Get:70 http://172.17.0.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:71 http://172.17.0.1/private bookworm-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:72 http://172.17.0.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:73 http://172.17.0.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.40.0-1 [463 kB]
Get:74 http://172.17.0.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:75 http://172.17.0.1/private bookworm-staging/main armhf libmd0 armhf 1.0.3-3 [27.2 kB]
Get:76 http://172.17.0.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.3-1 [103 kB]
Get:77 http://172.17.0.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:78 http://172.17.0.1/private bookworm-staging/main armhf libxcb1 armhf 1.14-3 [136 kB]
Get:79 http://172.17.0.1/private bookworm-staging/main armhf libx11-data all 2:1.7.2-2 [311 kB]
Get:80 http://172.17.0.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.7.2-2 [704 kB]
Get:81 http://172.17.0.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.14-3 [110 kB]
Get:82 http://172.17.0.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.14-3 [101 kB]
Get:83 http://172.17.0.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:84 http://172.17.0.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:85 http://172.17.0.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-5 [602 kB]
Get:86 http://172.17.0.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.43.0-1 [65.3 kB]
Get:87 http://172.17.0.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:88 http://172.17.0.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:89 http://172.17.0.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-2 [161 kB]
Get:90 http://172.17.0.1/private bookworm-staging/main armhf libcurl4 armhf 7.74.0-1.3 [305 kB]
Get:91 http://172.17.0.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.68.4-1 [1197 kB]
Get:92 http://172.17.0.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [122 kB]
Get:93 http://172.17.0.1/private bookworm-staging/main armhf libgfortran5 armhf 11.2.0-4+rpi1 [235 kB]
Get:94 http://172.17.0.1/private bookworm-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:95 http://172.17.0.1/private bookworm-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:96 http://172.17.0.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:97 http://172.17.0.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:98 http://172.17.0.1/private bookworm-staging/main armhf libharfbuzz0b armhf 2.7.4-1 [1422 kB]
Get:99 http://172.17.0.1/private bookworm-staging/main armhf libthai-data all 0.1.28-4.1 [171 kB]
Get:100 http://172.17.0.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-1+b1 [39.7 kB]
Get:101 http://172.17.0.1/private bookworm-staging/main armhf libthai0 armhf 0.1.28-4.1 [51.4 kB]
Get:102 http://172.17.0.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.48.10+ds1-1 [184 kB]
Get:103 http://172.17.0.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.48.10+ds1-1 [66.6 kB]
Get:104 http://172.17.0.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.48.10+ds1-1 [56.8 kB]
Get:105 http://172.17.0.1/private bookworm-staging/main armhf libtcl8.6 armhf 8.6.11+dfsg-1 [894 kB]
Get:106 http://172.17.0.1/private bookworm-staging/main armhf libdeflate0 armhf 1.7-2 [44.1 kB]
Get:107 http://172.17.0.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:108 http://172.17.0.1/private bookworm-staging/main armhf libwebp6 armhf 0.6.1-2.1 [225 kB]
Get:109 http://172.17.0.1/private bookworm-staging/main armhf libtiff5 armhf 4.2.0-1 [268 kB]
Get:110 http://172.17.0.1/private bookworm-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:111 http://172.17.0.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:112 http://172.17.0.1/private bookworm-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:113 http://172.17.0.1/private bookworm-staging/main armhf libtk8.6 armhf 8.6.11.1-1 [681 kB]
Get:114 http://172.17.0.1/private bookworm-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:115 http://172.17.0.1/private bookworm-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:116 http://172.17.0.1/private bookworm-staging/main armhf libxt6 armhf 1:1.2.0-1 [159 kB]
Get:117 http://172.17.0.1/private bookworm-staging/main armhf r-base-core armhf 4.1.1-2 [25.3 MB]
Get:118 http://172.17.0.1/private bookworm-staging/main armhf libgfortran-10-dev armhf 10.3.0-9+rpi1 [276 kB]
Get:119 http://172.17.0.1/private bookworm-staging/main armhf gfortran-10 armhf 10.3.0-9+rpi1 [7201 kB]
Get:120 http://172.17.0.1/private bookworm-staging/main armhf gfortran armhf 4:10.2.1-1+rpi1 [1428 B]
Get:121 http://172.17.0.1/private bookworm-staging/main armhf libblas-dev armhf 3.9.0-3 [113 kB]
Get:122 http://172.17.0.1/private bookworm-staging/main armhf liblapack-dev armhf 3.9.0-3 [2980 kB]
Get:123 http://172.17.0.1/private bookworm-staging/main armhf libncurses6 armhf 6.2+20201114-4 [79.7 kB]
Get:124 http://172.17.0.1/private bookworm-staging/main armhf libncurses-dev armhf 6.2+20201114-4 [288 kB]
Get:125 http://172.17.0.1/private bookworm-staging/main armhf libncurses5-dev armhf 6.2+20201114-4 [940 B]
Get:126 http://172.17.0.1/private bookworm-staging/main armhf libreadline-dev armhf 8.1-2 [121 kB]
Get:127 http://172.17.0.1/private bookworm-staging/main armhf libjpeg62-turbo-dev armhf 1:2.0.6-4 [240 kB]
Get:128 http://172.17.0.1/private bookworm-staging/main armhf libjpeg-dev armhf 1:2.0.6-4 [67.8 kB]
Get:129 http://172.17.0.1/private bookworm-staging/main armhf libpcre2-16-0 armhf 10.36-2 [197 kB]
Get:130 http://172.17.0.1/private bookworm-staging/main armhf libpcre2-32-0 armhf 10.36-2 [187 kB]
Get:131 http://172.17.0.1/private bookworm-staging/main armhf libpcre2-posix2 armhf 10.36-2 [48.7 kB]
Get:132 http://172.17.0.1/private bookworm-staging/main armhf libpcre2-dev armhf 10.36-2 [626 kB]
Get:133 http://172.17.0.1/private bookworm-staging/main armhf libpcre16-3 armhf 2:8.39-13 [235 kB]
Get:134 http://172.17.0.1/private bookworm-staging/main armhf libpcre32-3 armhf 2:8.39-13 [228 kB]
Get:135 http://172.17.0.1/private bookworm-staging/main armhf libpcrecpp0v5 armhf 2:8.39-13 [150 kB]
Get:136 http://172.17.0.1/private bookworm-staging/main armhf libpcre3-dev armhf 2:8.39-13 [566 kB]
Get:137 http://172.17.0.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:138 http://172.17.0.1/private bookworm-staging/main armhf libpng-dev armhf 1.6.37-3 [277 kB]
Get:139 http://172.17.0.1/private bookworm-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:140 http://172.17.0.1/private bookworm-staging/main armhf liblzma-dev armhf 5.2.5-2 [219 kB]
Get:141 http://172.17.0.1/private bookworm-staging/main armhf icu-devtools armhf 67.1-7 [172 kB]
Get:142 http://172.17.0.1/private bookworm-staging/main armhf libicu-dev armhf 67.1-7 [9228 kB]
Get:143 http://172.17.0.1/private bookworm-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:144 http://172.17.0.1/private bookworm-staging/main armhf xauth armhf 1:1.1-1 [36.6 kB]
Get:145 http://172.17.0.1/private bookworm-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:146 http://172.17.0.1/private bookworm-staging/main armhf r-base-dev all 4.1.1-2 [4488 B]
Get:147 http://172.17.0.1/private bookworm-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:148 http://172.17.0.1/private bookworm-staging/main armhf libswitch-perl all 2.17-2.1 [20.0 kB]
Get:149 http://172.17.0.1/private bookworm-staging/main armhf libencode-locale-perl all 1.05-1.1 [13.2 kB]
Get:150 http://172.17.0.1/private bookworm-staging/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get:151 http://172.17.0.1/private bookworm-staging/main armhf libhttp-date-perl all 6.05-1 [10.4 kB]
Get:152 http://172.17.0.1/private bookworm-staging/main armhf libio-html-perl all 1.004-2 [16.1 kB]
Get:153 http://172.17.0.1/private bookworm-staging/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get:154 http://172.17.0.1/private bookworm-staging/main armhf liburi-perl all 5.08-1 [90.6 kB]
Get:155 http://172.17.0.1/private bookworm-staging/main armhf libhttp-message-perl all 6.33-1 [80.1 kB]
Get:156 http://172.17.0.1/private bookworm-staging/main armhf libparams-util-perl armhf 1.102-1+b1 [24.6 kB]
Get:157 http://172.17.0.1/private bookworm-staging/main armhf libsub-install-perl all 0.928-1.1 [10.8 kB]
Get:158 http://172.17.0.1/private bookworm-staging/main armhf libdata-optlist-perl all 0.110-1.1 [10.8 kB]
Get:159 http://172.17.0.1/private bookworm-staging/main armhf libb-hooks-op-check-perl armhf 0.22-1+b4 [11.0 kB]
Get:160 http://172.17.0.1/private bookworm-staging/main armhf libdynaloader-functions-perl all 0.003-1.1 [12.7 kB]
Get:161 http://172.17.0.1/private bookworm-staging/main armhf libdevel-callchecker-perl armhf 0.008-1+b2 [15.7 kB]
Get:162 http://172.17.0.1/private bookworm-staging/main armhf libparams-classify-perl armhf 0.015-1+b3 [24.6 kB]
Get:163 http://172.17.0.1/private bookworm-staging/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get:164 http://172.17.0.1/private bookworm-staging/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB]
Get:165 http://172.17.0.1/private bookworm-staging/main armhf libmodule-implementation-perl all 0.09-1.1 [12.4 kB]
Get:166 http://172.17.0.1/private bookworm-staging/main armhf libpackage-stash-perl all 0.39-1 [21.9 kB]
Get:167 http://172.17.0.1/private bookworm-staging/main armhf libclass-load-perl all 0.25-1 [16.1 kB]
Get:168 http://172.17.0.1/private bookworm-staging/main armhf libclass-load-xs-perl armhf 0.10-1+b4 [14.3 kB]
Get:169 http://172.17.0.1/private bookworm-staging/main armhf libsub-exporter-progressive-perl all 0.001013-1 [7588 B]
Get:170 http://172.17.0.1/private bookworm-staging/main armhf libdevel-globaldestruction-perl all 0.14-1.1 [8312 B]
Get:171 http://172.17.0.1/private bookworm-staging/main armhf libalgorithm-c3-perl all 0.11-1 [11.7 kB]
Get:172 http://172.17.0.1/private bookworm-staging/main armhf libclass-c3-perl all 0.35-1 [22.9 kB]
Get:173 http://172.17.0.1/private bookworm-staging/main armhf libmro-compat-perl all 0.13-1 [12.2 kB]
Get:174 http://172.17.0.1/private bookworm-staging/main armhf libsub-identify-perl armhf 0.14-1+b3 [11.6 kB]
Get:175 http://172.17.0.1/private bookworm-staging/main armhf libdevel-overloadinfo-perl all 0.005-1 [7212 B]
Get:176 http://172.17.0.1/private bookworm-staging/main armhf libdevel-stacktrace-perl all 2.0400-1 [28.6 kB]
Get:177 http://172.17.0.1/private bookworm-staging/main armhf libsub-exporter-perl all 0.988-1 [51.9 kB]
Get:178 http://172.17.0.1/private bookworm-staging/main armhf libeval-closure-perl all 0.14-1 [11.5 kB]
Get:179 http://172.17.0.1/private bookworm-staging/main armhf libdist-checkconflicts-perl all 0.11-1.1 [10.2 kB]
Get:180 http://172.17.0.1/private bookworm-staging/main armhf libmodule-runtime-conflicts-perl all 0.003-1.1 [7156 B]
Get:181 http://172.17.0.1/private bookworm-staging/main armhf libsub-name-perl armhf 0.26-1+b1 [13.2 kB]
Get:182 http://172.17.0.1/private bookworm-staging/main armhf libpackage-deprecationmanager-perl all 0.17-1.1 [16.6 kB]
Get:183 http://172.17.0.1/private bookworm-staging/main armhf libpackage-stash-xs-perl armhf 0.29-1+b2 [18.5 kB]
Get:184 http://172.17.0.1/private bookworm-staging/main armhf libmoose-perl armhf 2.2014-2 [802 kB]
Get:185 http://172.17.0.1/private bookworm-staging/main armhf libvariable-magic-perl armhf 0.62-1+b3 [43.0 kB]
Get:186 http://172.17.0.1/private bookworm-staging/main armhf libb-hooks-endofscope-perl all 0.24-1.1 [18.9 kB]
Get:187 http://172.17.0.1/private bookworm-staging/main armhf libnamespace-clean-perl all 0.27-1 [17.3 kB]
Get:188 http://172.17.0.1/private bookworm-staging/main armhf libcurl3-gnutls armhf 7.74.0-1.3 [301 kB]
Get:189 http://172.17.0.1/private bookworm-staging/main armhf libwww-curl-perl armhf 4.17-7+b1 [58.9 kB]
Get:190 http://172.17.0.1/private bookworm-staging/main armhf libwww-curl-simple-perl all 0.100191-2 [12.5 kB]
Get:191 http://172.17.0.1/private bookworm-staging/main armhf dh-r all 20210816 [41.6 kB]
Get:192 http://172.17.0.1/private bookworm-staging/main armhf libnlopt0 armhf 2.7.0-4+b1 [140 kB]
Get:193 http://172.17.0.1/private bookworm-staging/main armhf r-cran-littler armhf 0.3.13-2 [94.5 kB]
Get:194 http://172.17.0.1/private bookworm-staging/main armhf littler all 0.3.13-2 [16.4 kB]
Get:195 http://172.17.0.1/private bookworm-staging/main armhf r-cran-boot all 1.3-28-2 [623 kB]
Get:196 http://172.17.0.1/private bookworm-staging/main armhf r-cran-lattice armhf 0.20-41-1+b1 [1167 kB]
Get:197 http://172.17.0.1/private bookworm-staging/main armhf r-cran-matrix armhf 1.3-2-1 [3565 kB]
Get:198 http://172.17.0.1/private bookworm-staging/main armhf r-cran-mass armhf 7.3-53.1-1 [1113 kB]
Get:199 http://172.17.0.1/private bookworm-staging/main armhf r-cran-nlme armhf 3.1.153-1 [2266 kB]
Get:200 http://172.17.0.1/private bookworm-staging/main armhf r-cran-pkgkitten all 0.2.2-2 [27.0 kB]
Get:201 http://172.17.0.1/private bookworm-staging/main armhf r-cran-rcpp armhf 1.0.6-1 [1998 kB]
Get:202 http://172.17.0.1/private bookworm-staging/main armhf r-cran-minqa armhf 1.2.4-1+b2 [100 kB]
Get:203 http://172.17.0.1/private bookworm-staging/main armhf r-cran-nloptr armhf 1.2.2.2-1 [287 kB]
Get:204 http://172.17.0.1/private bookworm-staging/main armhf r-cran-rcppeigen armhf 0.3.3.9.1-1 [1324 kB]
Get:205 http://172.17.0.1/private bookworm-staging/main armhf r-cran-statmod armhf 1.4.35-1 [256 kB]
Get:206 http://172.17.0.1/private bookworm-staging/main armhf r-cran-lme4 armhf 1.1-27.1-2 [4409 kB]
Get:207 http://172.17.0.1/private bookworm-staging/main armhf r-cran-numderiv all 2016.8-1.1-3 [115 kB]
Get:208 http://172.17.0.1/private bookworm-staging/main armhf r-cran-tmb armhf 1.7.18-2 [845 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Unpacking bsdextrautils (2.37.2-1) ...
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Setting up gcc-11-base:armhf (11.2.0-4+rpi1) ...
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Setting up libgcc-s1:armhf (11.2.0-4+rpi1) ...
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Setting up libstdc++6:armhf (11.2.0-4+rpi1) ...
Selecting previously unselected package libuchardet0:armhf.
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Unpacking groff-base (1.22.4-7) ...
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Unpacking libreadline8:armhf (8.1-2) over (8.1-1) ...
Setting up libreadline8:armhf (8.1-2) ...
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Unpacking libgomp1:armhf (11.2.0-4+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking libatomic1:armhf (11.2.0-4+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking libasan6:armhf (11.2.0-4+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking gcc-10 (10.3.0-9+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking libgcc-10-dev:armhf (10.3.0-9+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking libcc1-0:armhf (11.2.0-4+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking cpp-10 (10.3.0-9+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking gcc-10-base:armhf (10.3.0-9+rpi1) over (10.2.1-6+rpi1) ...
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Unpacking sensible-utils (0.0.17) ...
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Unpacking libmagic-mgc (1:5.39-3) ...
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Setting up libexpat1:armhf (2.4.1-2) ...
Setting up libpcrecpp0v5:armhf (2:8.39-13) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
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Setting up libpixman-1-0:armhf (0.40.0-1) ...
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Setting up bsdextrautils (2.37.2-1) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
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No schema files found: doing nothing.
Setting up unzip (6.0-26) ...
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Setting up libbrotli1:armhf (1.0.9-2+b1) ...
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Setting up binutils-common:armhf (2.37-5+rpi1) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
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Setting up libjbig0:armhf (2.1-3.1+b2) ...
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Setting up gcc-10-base:armhf (10.3.0-9+rpi1) ...
Setting up zip (3.0-12) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
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update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up dctrl-tools (2.24-3) ...
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Setting up libice6:armhf (2:1.0.10-1) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2+20201114-4) ...
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Setting up gettext (0.21-4) ...
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Setting up libjpeg-dev:armhf (1:2.0.6-4) ...
Setting up m4 (1.4.18-5) ...
Setting up libcurl3-gnutls:armhf (7.74.0-1.3) ...
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Setting up libclass-c3-perl (0.35-1) ...
Setting up libreadline-dev:armhf (8.1-2) ...
Setting up libdevel-callchecker-perl (0.008-1+b2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libthai0:armhf (0.1.28-4.1) ...
Setting up ca-certificates (20210119) ...
Updating certificates in /etc/ssl/certs...
129 added, 0 removed; done.
Setting up libfreetype6:armhf (2.10.4+dfsg-1) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libdata-optlist-perl (0.110-1.1) ...
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Setting up binutils-arm-linux-gnueabihf (2.37-5+rpi1) ...
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Setting up libsub-exporter-perl (0.988-1) ...
Setting up libhttp-message-perl (6.33-1) ...
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Creating config file /etc/papersize with new version
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Not building database; man-db/auto-update is not 'true'.
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Setting up gfortran (4:10.2.1-1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up r-base-core (4.1.1-2) ...
Creating config file /etc/R/Renviron with new version
Setting up libnamespace-clean-perl (0.27-1) ...
Setting up r-cran-lattice (0.20-41-1+b1) ...
Setting up r-cran-nlme (3.1.153-1) ...
Setting up r-cran-statmod (1.4.35-1) ...
Setting up r-cran-pkgkitten (0.2.2-2) ...
Setting up r-cran-numderiv (2016.8-1.1-3) ...
Setting up r-cran-littler (0.3.13-2) ...
Setting up r-cran-rcpp (1.0.6-1) ...
Setting up r-cran-nloptr (1.2.2.2-1) ...
Setting up r-cran-boot (1.3-28-2) ...
Setting up r-base-dev (4.1.1-2) ...
Setting up littler (0.3.13-2) ...
Setting up libwww-curl-simple-perl (0.100191-2) ...
Setting up r-cran-mass (7.3-53.1-1) ...
Setting up r-cran-matrix (1.3-2-1) ...
Setting up dh-r (20210816) ...
Setting up r-cran-rcppeigen (0.3.3.9.1-1) ...
Setting up r-cran-minqa (1.2.4-1+b2) ...
Setting up r-cran-lme4 (1.1-27.1-2) ...
Setting up r-cran-tmb (1.7.18-2) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-13+rpi1) ...
Processing triggers for ca-certificates (20210119) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.19.20-v7+ #1 SMP Mon Mar 18 11:37:02 GMT 2019 armhf (armv7l)
Toolchain package versions: binutils_2.37-5+rpi1 dpkg-dev_1.20.9+rpi1 g++-10_10.3.0-9+rpi1 gcc-10_10.3.0-9+rpi1 libc6-dev_2.31-13+rpi1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 linux-libc-dev_5.10.46-4+rpi1
Package versions: adduser_3.118 apt_2.2.4 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1+rpi1 base-passwd_3.5.51 bash_5.1-2 binutils_2.37-5+rpi1 binutils-arm-linux-gnueabihf_2.37-5+rpi1 binutils-common_2.37-5+rpi1 bsdextrautils_2.37.2-1 bsdutils_1:2.36.1-8 build-essential_12.9 bzip2_1.0.8-4 ca-certificates_20210119 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.3.0-9+rpi1 dash_0.5.11+git20200708+dd9ef66-5 dctrl-tools_2.24-3 debconf_1.5.77 debhelper_13.5.2 debianutils_4.11.2 dh-autoreconf_20 dh-r_20210816 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.2-2 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:10.2.1-1+rpi1 g++-10_10.3.0-9+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.3.0-9+rpi1 gcc-10-base_10.3.0-9+rpi1 gcc-11-base_11.2.0-4+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.3.0-22+rpi1 gettext_0.21-4 gettext-base_0.21-4 gfortran_4:10.2.1-1+rpi1 gfortran-10_10.3.0-9+rpi1 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 icu-devtools_67.1-7 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libalgorithm-c3-perl_0.11-1 libapt-pkg6.0_2.2.4 libarchive-zip-perl_1.68-1 libasan6_11.2.0-4+rpi1 libassuan0_2.5.3-7.1 libatomic1_11.2.0-4+rpi1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libb-hooks-endofscope-perl_0.24-1.1 libb-hooks-op-check-perl_0.22-1+b4 libbinutils_2.37-5+rpi1 libblas-dev_3.9.0-3 libblas3_3.9.0-3 libblkid1_2.36.1-8 libbrotli1_1.0.9-2+b1 libbsd0_0.11.3-1 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-13+rpi1 libc-dev-bin_2.31-13+rpi1 libc6_2.31-13+rpi1 libc6-dev_2.31-13+rpi1 libcairo2_1.16.0-5 libcap-ng0_0.7.9-2.2+b1 libcc1-0_11.2.0-4+rpi1 libclass-c3-perl_0.35-1 libclass-load-perl_0.25-1 libclass-load-xs-perl_0.10-1+b4 libcom-err2_1.46.2-2 libcrypt-dev_1:4.4.18-4 libcrypt1_1:4.4.18-4 libctf-nobfd0_2.37-5+rpi1 libctf0_2.37-5+rpi1 libcurl3-gnutls_7.74.0-1.3 libcurl4_7.74.0-1.3 libdata-optlist-perl_0.110-1.1 libdatrie1_0.2.13-1+b1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.5.2 libdeflate0_1.7-2 libdevel-callchecker-perl_0.008-1+b2 libdevel-globaldestruction-perl_0.14-1.1 libdevel-overloadinfo-perl_0.005-1 libdevel-stacktrace-perl_2.0400-1 libdist-checkconflicts-perl_0.11-1.1 libdpkg-perl_1.20.9+rpi1 libdynaloader-functions-perl_0.003-1.1 libelf1_0.185-2 libencode-locale-perl_1.05-1.1 libeval-closure-perl_0.14-1 libexpat1_2.4.1-2 libext2fs2_1.46.2-2 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.4+dfsg-1 libfribidi0_1.0.8-2 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libtext-charwidth-perl_0.04-10+b1 libtext-iconv-perl_1.7-7+b1 libthai-data_0.1.28-4.1 libthai0_0.1.28-4.1 libtiff5_4.2.0-1 libtimedate-perl_2.3300-2 libtinfo6_6.2+20201114-4 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtk8.6_8.6.11.1-1 libtool_2.4.6-15 libtry-tiny-perl_0.30-1 libubsan1_11.2.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_247.3-6+rpi1 libunistring2_0.9.10-4 liburi-perl_5.08-1 libuuid1_2.36.1-8 libvariable-magic-perl_0.62-1+b3 libwebp6_0.6.1-2.1 libwww-curl-perl_4.17-7+b1 libwww-curl-simple-perl_0.100191-2 libx11-6_2:1.7.2-2 libx11-data_2:1.7.2-2 libxau6_1:1.0.9-1 libxcb-render0_1.14-3 libxcb-shm0_1.14-3 libxcb1_1.14-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.2-2 libxml2_2.9.12+dfsg-5 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.2.0-1 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2.1+rpi1 linux-libc-dev_5.10.46-4+rpi1 littler_0.3.13-2 login_1:4.8.1-1 logsave_1.46.2-2 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-8 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 openssl_1.1.1l-1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-4+deb11u1 perl-base_5.32.1-4+deb11u1 perl-modules-5.32_5.32.1-5 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 r-base-core_4.1.1-2 r-base-dev_4.1.1-2 r-cran-boot_1.3-28-2 r-cran-lattice_0.20-41-1+b1 r-cran-littler_0.3.13-2 r-cran-lme4_1.1-27.1-2 r-cran-mass_7.3-53.1-1 r-cran-matrix_1.3-2-1 r-cran-minqa_1.2.4-1+b2 r-cran-nlme_3.1.153-1 r-cran-nloptr_1.2.2.2-1 r-cran-numderiv_2016.8-1.1-3 r-cran-pkgkitten_0.2.2-2 r-cran-rcpp_1.0.6-1 r-cran-rcppeigen_0.3.3.9.1-1 r-cran-statmod_1.4.35-1 r-cran-tmb_1.7.18-2 raspbian-archive-keyring_20120528.2 readline-common_8.1-2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.17 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 ucf_3.0043 unzip_6.0-26 util-linux_2.36.1-8 x11-common_1:7.7+23 xauth_1:1.1-1 xdg-utils_1.1.3-4.1 xz-utils_5.2.5-2 zip_3.0-12 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: r-cran-glmmtmb
Binary: r-cran-glmmtmb
Architecture: any
Version: 1.1.2.3-1
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://cran.r-project.org/package=glmmTMB
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git
Testsuite: autopkgtest, autopkgtest-pkg-r
Testsuite-Triggers: r-cran-pscl, r-cran-testthat
Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-tmb, r-cran-lme4, r-cran-matrix, r-cran-nlme, r-cran-numderiv, r-cran-rcppeigen
Package-List:
r-cran-glmmtmb deb gnu-r optional arch=any
Checksums-Sha1:
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d729f42afbd030bbdb35501a5f10c515246181ac 13496 r-cran-glmmtmb_1.1.2.3-1.debian.tar.xz
Checksums-Sha256:
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8fc50a57d8883d711ab34e1c4a42144928633d56fa35325da83240a030a3aa72 13496 r-cran-glmmtmb_1.1.2.3-1.debian.tar.xz
Files:
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e26cda6993488bacbf72a7c41e19e714 13496 r-cran-glmmtmb_1.1.2.3-1.debian.tar.xz
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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.AO2YOKd5/trustedkeys.kbx': General error
gpgv: Signature made Thu Sep 23 09:33:26 2021 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-glmmtmb_1.1.2.3-1.dsc
dpkg-source: info: extracting r-cran-glmmtmb in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-glmmtmb_1.1.2.3.orig.tar.gz
dpkg-source: info: unpacking r-cran-glmmtmb_1.1.2.3-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=832a18d477544cb59969922e0a4c3a7a
JOURNAL_STREAM=8:17014
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=117
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-56cdf10e-79e8-4407-882e-dd3d9dcbda0d
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_CLASS=background
XDG_SESSION_ID=c6573
XDG_SESSION_TYPE=unspecified
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package r-cran-glmmtmb
dpkg-buildpackage: info: source version 1.1.2.3-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules binary-arch
dh binary-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install --destdir=debian/r-cran-glmmtmb/ -a -O--buildsystem=R
I: R packages needed for DEP8: testthat, pscl
I: R Package: glmmTMB Version: 1.1.2.3
I: Building using R version 4.1.1-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 23 Sep 2021 11:22:41 +0200
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-glmmtmb/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-glmmtmb/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 23 Sep 2021 11:22:41 +0200'"
* installing *source* package ‘glmmTMB’ ...
** package ‘glmmTMB’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/TMB/include' -I'/usr/lib/R/site-library/RcppEigen/include' -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/r-base-1lMLac/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glmmTMB.cpp -o glmmTMB.o
In file included from /usr/include/c++/10/vector:72,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:15,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26,
from /usr/lib/R/site-library/TMB/include/TMB.hpp:54,
from glmmTMB.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<CppAD::AD<double>, int>}; _Tp = Eigen::Triplet<CppAD::AD<double>, int>; _Alloc = std::allocator<Eigen::Triplet<CppAD::AD<double>, int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<Eigen::Triplet<CppAD::AD<double>, int>, std::allocator<Eigen::Triplet<CppAD::AD<double>, int> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<double, int>}; _Tp = Eigen::Triplet<double, int>; _Alloc = std::allocator<Eigen::Triplet<double, int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD<double>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<double>, int>*, std::vector<Eigen::Triplet<CppAD::AD<double>, int>, std::allocator<Eigen::Triplet<CppAD::AD<double>, int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = double]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Triplet<double, int>*, std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>}; _Tp = Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>; _Alloc = std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>}; _Tp = Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>; _Alloc = std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD<CppAD::AD<double> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD<CppAD::AD<CppAD::AD<double> > >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:371,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1,
from /usr/lib/R/site-library/TMB/include/TMB.hpp:53,
from glmmTMB.cpp:1:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<CppAD::AD<double> >; Type = CppAD::AD<double>]’:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
259 | while(size) ptr[--size].~T();
| ~~~~~~~~~~~~~~^~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop
259 | while(size) ptr[--size].~T();
| ^~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<double>; Type = double]’:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
259 | while(size) ptr[--size].~T();
| ~~~~~~~~~~~~~~^~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop
259 | while(size) ptr[--size].~T();
| ^~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<CppAD::AD<CppAD::AD<double> > >; Type = CppAD::AD<CppAD::AD<double> >]’:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
259 | while(size) ptr[--size].~T();
| ~~~~~~~~~~~~~~^~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop
259 | while(size) ptr[--size].~T();
| ^~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<CppAD::AD<CppAD::AD<CppAD::AD<double> > > >; Type = CppAD::AD<CppAD::AD<CppAD::AD<double> > >]’:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
259 | while(size) ptr[--size].~T();
| ~~~~~~~~~~~~~~^~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop
259 | while(size) ptr[--size].~T();
| ^~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/TMB/include' -I'/usr/lib/R/site-library/RcppEigen/include' -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/r-base-1lMLac/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.cpp -o utils.o
g++ -std=gnu++14 -shared -L/usr/lib/R/lib -Wl,-z,relro -o glmmTMB.so glmmTMB.o utils.o -fopenmp -L/usr/lib/R/lib -lR
"/usr/lib/R/bin/Rscript" -e "cat(as.character(packageVersion('TMB')), '\n', sep="", file='../inst/TMB-version')"
"/usr/lib/R/bin/Rscript" -e "cat(as.character(packageVersion('Matrix')), '\n', sep="", file='../inst/Matrix-version')"
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-glmmtmb/usr/lib/R/site-library/00LOCK-r-cran-glmmtmb-1.1.2.3/00new/glmmTMB/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (glmmTMB)
W: Ignoring specified R dependency: R (>= 3.2.0)
I: Using r-cran-testthat for Recommends:testthat
I: Using r-cran-pscl for Recommends:pscl
I: Using r-cran-knitr for Suggests:knitr
I: Using r-cran-rmarkdown for Suggests:rmarkdown
I: Using r-cran-mass for Suggests:MASS
I: Using r-cran-lattice for Suggests:lattice
I: Using r-cran-ggplot2 for Suggests:ggplot2 (>= 2.2.1)
I: Using r-cran-mlmrev for Suggests:mlmRev
I: Using r-cran-bbmle for Suggests:bbmle (>= 1.0.19)
I: Using r-cran-coda for Suggests:coda
I: Using r-cran-reshape2 for Suggests:reshape2
I: Using r-cran-car for Suggests:car (>= 3.0.6)
I: Using r-cran-emmeans for Suggests:emmeans (>= 1.4)
I: Using r-cran-estimability for Suggests:estimability
W: Cannot find a debian package for Suggests:DHARMa
I: Using r-cran-multcomp for Suggests:multcomp
W: Cannot find a debian package for Suggests:MuMIn
I: Using r-cran-effects for Suggests:effects (>= 4.0-1)
W: Cannot find a debian package for Suggests:dotwhisker
I: Using r-cran-broom for Suggests:broom
I: Using r-cran-broom.mixed for Suggests:broom.mixed
I: Using r-cran-plyr for Suggests:plyr
I: Using r-cran-png for Suggests:png
I: Using r-cran-boot for Suggests:boot
W: Cannot find a debian package for Suggests:texreg
I: Using r-cran-xtable for Suggests:xtable
W: Cannot find a debian package for Suggests:huxtable
W: Cannot find a debian package for Suggests:mvabund
I: Using r-cran-tmb for Imports:TMB (>= 1.7.14)
I: Using r-cran-lme4 for Imports:lme4 (>= 1.1-18.9000)
I: Using r-cran-matrix for Imports:Matrix
I: Using r-cran-nlme for Imports:nlme
I: Using r-cran-numderiv for Imports:numDeriv
I: Using r-cran-tmb for LinkingTo:TMB
I: Using r-cran-rcppeigen for LinkingTo:RcppEigen
I: Use r-cran-glmmtmb as Debian binary package for variables substitution
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_dwz -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-glmmtmb-dbgsym' in '../r-cran-glmmtmb-dbgsym_1.1.2.3-1_armhf.deb'.
dpkg-deb: building package 'r-cran-glmmtmb' in '../r-cran-glmmtmb_1.1.2.3-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> >../r-cran-glmmtmb_1.1.2.3-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-09-28T07:25:39Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-glmmtmb_1.1.2.3-1_armhf.changes:
---------------------------------------
Format: 1.8
Date: Thu, 23 Sep 2021 11:22:41 +0200
Source: r-cran-glmmtmb
Binary: r-cran-glmmtmb r-cran-glmmtmb-dbgsym
Architecture: armhf
Version: 1.1.2.3-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian pi4 based autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
r-cran-glmmtmb - Generalized Linear Mixed Models using Template Model Builder
Changes:
r-cran-glmmtmb (1.1.2.3-1) unstable; urgency=medium
.
* Disable reprotest
* New upstream version
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e21b503e644cc0d4a4812d1ac9bf8291 10025 gnu-r optional r-cran-glmmtmb_1.1.2.3-1_armhf.buildinfo
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+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: r-cran-glmmtmb
Binary: r-cran-glmmtmb r-cran-glmmtmb-dbgsym
Architecture: armhf
Version: 1.1.2.3-1
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Tue, 28 Sep 2021 07:25:37 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
autoconf (= 2.71-2),
automake (= 1:1.16.4-2),
autopoint (= 0.21-4),
autotools-dev (= 20180224.1+nmu1),
base-files (= 11.1+rpi1),
base-passwd (= 3.5.51),
bash (= 5.1-2),
binutils (= 2.37-5+rpi1),
binutils-arm-linux-gnueabihf (= 2.37-5+rpi1),
binutils-common (= 2.37-5+rpi1),
bsdextrautils (= 2.37.2-1),
bsdutils (= 1:2.36.1-8),
build-essential (= 12.9),
bzip2 (= 1.0.8-4),
ca-certificates (= 20210119),
coreutils (= 8.32-4),
cpp (= 4:10.2.1-1+rpi1),
cpp-10 (= 10.3.0-9+rpi1),
dash (= 0.5.11+git20200708+dd9ef66-5),
dctrl-tools (= 2.24-3),
debconf (= 1.5.77),
debhelper (= 13.5.2),
debianutils (= 4.11.2),
dh-autoreconf (= 20),
dh-r (= 20210816),
dh-strip-nondeterminism (= 1.12.0-1),
diffutils (= 1:3.7-5),
dpkg (= 1.20.9+rpi1),
dpkg-dev (= 1.20.9+rpi1),
dwz (= 0.14-1),
file (= 1:5.39-3),
findutils (= 4.8.0-1),
fontconfig (= 2.13.1-4.2),
fontconfig-config (= 2.13.1-4.2),
fonts-dejavu-core (= 2.37-2),
g++ (= 4:10.2.1-1+rpi1),
g++-10 (= 10.3.0-9+rpi1),
gcc (= 4:10.2.1-1+rpi1),
gcc-10 (= 10.3.0-9+rpi1),
gcc-10-base (= 10.3.0-9+rpi1),
gcc-11-base (= 11.2.0-4+rpi1),
gettext (= 0.21-4),
gettext-base (= 0.21-4),
gfortran (= 4:10.2.1-1+rpi1),
gfortran-10 (= 10.3.0-9+rpi1),
grep (= 3.6-1),
groff-base (= 1.22.4-7),
gzip (= 1.10-4),
hostname (= 3.23),
icu-devtools (= 67.1-7),
init-system-helpers (= 1.60),
intltool-debian (= 0.35.0+20060710.5),
libacl1 (= 2.2.53-10),
libalgorithm-c3-perl (= 0.11-1),
libarchive-zip-perl (= 1.68-1),
libasan6 (= 11.2.0-4+rpi1),
libatomic1 (= 11.2.0-4+rpi1),
libattr1 (= 1:2.4.48-6),
libaudit-common (= 1:3.0-2),
libaudit1 (= 1:3.0-2),
libb-hooks-endofscope-perl (= 0.24-1.1),
libb-hooks-op-check-perl (= 0.22-1+b4),
libbinutils (= 2.37-5+rpi1),
libblas-dev (= 3.9.0-3),
libblas3 (= 3.9.0-3),
libblkid1 (= 2.36.1-8),
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libbsd0 (= 0.11.3-1),
libbz2-1.0 (= 1.0.8-4),
libbz2-dev (= 1.0.8-4),
libc-bin (= 2.31-13+rpi1),
libc-dev-bin (= 2.31-13+rpi1),
libc6 (= 2.31-13+rpi1),
libc6-dev (= 2.31-13+rpi1),
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libctf0 (= 2.37-5+rpi1),
libcurl3-gnutls (= 7.74.0-1.3),
libcurl4 (= 7.74.0-1.3),
libdata-optlist-perl (= 0.110-1.1),
libdatrie1 (= 0.2.13-1+b1),
libdb5.3 (= 5.3.28+dfsg1-0.8),
libdebconfclient0 (= 0.260),
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libencode-locale-perl (= 1.05-1.1),
libeval-closure-perl (= 0.14-1),
libexpat1 (= 2.4.1-2),
libffi7 (= 3.3-6),
libfile-stripnondeterminism-perl (= 1.12.0-1),
libfile-which-perl (= 1.23-1),
libfontconfig1 (= 2.13.1-4.2),
libfreetype6 (= 2.10.4+dfsg-1),
libfribidi0 (= 1.0.8-2),
libgcc-10-dev (= 10.3.0-9+rpi1),
libgcc-s1 (= 11.2.0-4+rpi1),
libgcrypt20 (= 1.8.7-6),
libgdbm-compat4 (= 1.19-2),
libgdbm6 (= 1.19-2),
libgfortran-10-dev (= 10.3.0-9+rpi1),
libgfortran5 (= 11.2.0-4+rpi1),
libglib2.0-0 (= 2.68.4-1),
libgmp10 (= 2:6.2.1+dfsg-1),
libgnutls30 (= 3.7.1-5),
libgomp1 (= 11.2.0-4+rpi1),
libgpg-error0 (= 1.38-2),
libgraphite2-3 (= 1.3.14-1),
libgssapi-krb5-2 (= 1.18.3-6),
libharfbuzz0b (= 2.7.4-1),
libhogweed6 (= 3.7.3-1),
libhttp-date-perl (= 6.05-1),
libhttp-message-perl (= 6.33-1),
libice6 (= 2:1.0.10-1),
libicu-dev (= 67.1-7),
libicu67 (= 67.1-7),
libidn2-0 (= 2.3.0-5),
libio-html-perl (= 1.004-2),
libisl23 (= 0.23-1),
libjbig0 (= 2.1-3.1+b2),
libjpeg-dev (= 1:2.0.6-4),
libjpeg62-turbo (= 1:2.0.6-4),
libjpeg62-turbo-dev (= 1:2.0.6-4),
libk5crypto3 (= 1.18.3-6),
libkeyutils1 (= 1.6.1-2),
libkrb5-3 (= 1.18.3-6),
libkrb5support0 (= 1.18.3-6),
liblapack-dev (= 3.9.0-3),
liblapack3 (= 3.9.0-3),
libldap-2.4-2 (= 2.4.57+dfsg-3),
liblwp-mediatypes-perl (= 6.04-1),
liblz4-1 (= 1.9.3-2),
liblzma-dev (= 5.2.5-2),
liblzma5 (= 5.2.5-2),
libmagic-mgc (= 1:5.39-3),
libmagic1 (= 1:5.39-3),
libmd0 (= 1.0.3-3),
libmodule-implementation-perl (= 0.09-1.1),
libmodule-runtime-conflicts-perl (= 0.003-1.1),
libmodule-runtime-perl (= 0.016-1),
libmoose-perl (= 2.2014-2),
libmount1 (= 2.36.1-8),
libmpc3 (= 1.2.0-1),
libmpfr6 (= 4.1.0-3),
libmro-compat-perl (= 0.13-1),
libnamespace-clean-perl (= 0.27-1),
libncurses-dev (= 6.2+20201114-4),
libncurses5-dev (= 6.2+20201114-4),
libncurses6 (= 6.2+20201114-4),
libncursesw6 (= 6.2+20201114-4),
libnettle8 (= 3.7.3-1),
libnghttp2-14 (= 1.43.0-1),
libnlopt0 (= 2.7.0-4+b1),
libnsl-dev (= 1.3.0-2),
libnsl2 (= 1.3.0-2),
libp11-kit0 (= 0.23.22-1),
libpackage-deprecationmanager-perl (= 0.17-1.1),
libpackage-stash-perl (= 0.39-1),
libpackage-stash-xs-perl (= 0.29-1+b2),
libpam-modules (= 1.4.0-9),
libpam-modules-bin (= 1.4.0-9),
libpam-runtime (= 1.4.0-9),
libpam0g (= 1.4.0-9),
libpango-1.0-0 (= 1.48.10+ds1-1),
libpangocairo-1.0-0 (= 1.48.10+ds1-1),
libpangoft2-1.0-0 (= 1.48.10+ds1-1),
libpaper-utils (= 1.1.28),
libpaper1 (= 1.1.28),
libparams-classify-perl (= 0.015-1+b3),
libparams-util-perl (= 1.102-1+b1),
libpcre16-3 (= 2:8.39-13),
libpcre2-16-0 (= 10.36-2),
libpcre2-32-0 (= 10.36-2),
libpcre2-8-0 (= 10.36-2),
libpcre2-dev (= 10.36-2),
libpcre2-posix2 (= 10.36-2),
libpcre3 (= 2:8.39-13),
libpcre3-dev (= 2:8.39-13),
libpcre32-3 (= 2:8.39-13),
libpcrecpp0v5 (= 2:8.39-13),
libperl5.32 (= 5.32.1-4+deb11u1),
libpipeline1 (= 1.5.3-1),
libpixman-1-0 (= 0.40.0-1),
libpng-dev (= 1.6.37-3),
libpng16-16 (= 1.6.37-3),
libpsl5 (= 0.21.0-1.2),
libreadline-dev (= 8.1-2),
libreadline8 (= 8.1-2),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
libsasl2-2 (= 2.1.27+dfsg-2.1),
libsasl2-modules-db (= 2.1.27+dfsg-2.1),
libseccomp2 (= 2.5.1-1+rpi1),
libselinux1 (= 3.1-3),
libsigsegv2 (= 2.13-1),
libsm6 (= 2:1.2.3-1),
libsmartcols1 (= 2.36.1-8),
libssh2-1 (= 1.10.0-2),
libssl1.1 (= 1.1.1k-1),
libstdc++-10-dev (= 10.3.0-9+rpi1),
libstdc++6 (= 11.2.0-4+rpi1),
libsub-exporter-perl (= 0.988-1),
libsub-exporter-progressive-perl (= 0.001013-1),
libsub-identify-perl (= 0.14-1+b3),
libsub-install-perl (= 0.928-1.1),
libsub-name-perl (= 0.26-1+b1),
libsub-override-perl (= 0.09-2),
libswitch-perl (= 2.17-2.1),
libsystemd0 (= 247.3-6+rpi1),
libtasn1-6 (= 4.16.0-2),
libtcl8.6 (= 8.6.11+dfsg-1),
libthai-data (= 0.1.28-4.1),
libthai0 (= 0.1.28-4.1),
libtiff5 (= 4.2.0-1),
libtimedate-perl (= 2.3300-2),
libtinfo6 (= 6.2+20201114-4),
libtirpc-common (= 1.3.1-1),
libtirpc-dev (= 1.3.1-1),
libtirpc3 (= 1.3.1-1),
libtk8.6 (= 8.6.11.1-1),
libtool (= 2.4.6-15),
libtry-tiny-perl (= 0.30-1),
libubsan1 (= 11.2.0-4+rpi1),
libuchardet0 (= 0.0.7-1),
libudev1 (= 247.3-6+rpi1),
libunistring2 (= 0.9.10-4),
liburi-perl (= 5.08-1),
libuuid1 (= 2.36.1-8),
libvariable-magic-perl (= 0.62-1+b3),
libwebp6 (= 0.6.1-2.1),
libwww-curl-perl (= 4.17-7+b1),
libwww-curl-simple-perl (= 0.100191-2),
libx11-6 (= 2:1.7.2-2),
libx11-data (= 2:1.7.2-2),
libxau6 (= 1:1.0.9-1),
libxcb-render0 (= 1.14-3),
libxcb-shm0 (= 1.14-3),
libxcb1 (= 1.14-3),
libxdmcp6 (= 1:1.1.2-3),
libxext6 (= 2:1.3.4-1),
libxft2 (= 2.3.2-2),
libxml2 (= 2.9.12+dfsg-5),
libxmuu1 (= 2:1.1.2-2+b3),
libxrender1 (= 1:0.9.10-1),
libxss1 (= 1:1.2.3-1),
libxt6 (= 1:1.2.0-1),
libzstd1 (= 1.4.8+dfsg-2.1+rpi1),
linux-libc-dev (= 5.10.46-4+rpi1),
littler (= 0.3.13-2),
login (= 1:4.8.1-1),
lsb-base (= 11.1.0+rpi1),
m4 (= 1.4.18-5),
make (= 4.3-4.1),
man-db (= 2.9.4-2),
mawk (= 1.3.4.20200120-2),
ncurses-base (= 6.2+20201114-2),
ncurses-bin (= 6.2+20201114-2),
openssl (= 1.1.1l-1),
patch (= 2.7.6-7),
perl (= 5.32.1-4+deb11u1),
perl-base (= 5.32.1-4+deb11u1),
perl-modules-5.32 (= 5.32.1-5),
pkg-config (= 0.29.2-1),
po-debconf (= 1.0.21+nmu1),
r-base-core (= 4.1.1-2),
r-base-dev (= 4.1.1-2),
r-cran-boot (= 1.3-28-2),
r-cran-lattice (= 0.20-41-1+b1),
r-cran-littler (= 0.3.13-2),
r-cran-lme4 (= 1.1-27.1-2),
r-cran-mass (= 7.3-53.1-1),
r-cran-matrix (= 1.3-2-1),
r-cran-minqa (= 1.2.4-1+b2),
r-cran-nlme (= 3.1.153-1),
r-cran-nloptr (= 1.2.2.2-1),
r-cran-numderiv (= 2016.8-1.1-3),
r-cran-pkgkitten (= 0.2.2-2),
r-cran-rcpp (= 1.0.6-1),
r-cran-rcppeigen (= 0.3.3.9.1-1),
r-cran-statmod (= 1.4.35-1),
r-cran-tmb (= 1.7.18-2),
readline-common (= 8.1-2),
sed (= 4.7-1),
sensible-utils (= 0.0.17),
sysvinit-utils (= 2.96-7),
tar (= 1.34+dfsg-1),
tzdata (= 2021a-1),
ucf (= 3.0043),
unzip (= 6.0-26),
util-linux (= 2.36.1-8),
x11-common (= 1:7.7+23),
xauth (= 1:1.1-1),
xdg-utils (= 1.1.3-4.1),
xz-utils (= 5.2.5-2),
zip (= 3.0-12),
zlib1g (= 1:1.2.11.dfsg-2),
zlib1g-dev (= 1:1.2.11.dfsg-2)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="C.UTF-8"
SOURCE_DATE_EPOCH="1632388961"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-glmmtmb-dbgsym_1.1.2.3-1_armhf.deb
-----------------------------------------
new Debian package, version 2.0.
size 11974536 bytes: control archive=540 bytes.
398 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-glmmtmb-dbgsym
Source: r-cran-glmmtmb
Version: 1.1.2.3-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 12061
Depends: r-cran-glmmtmb (= 1.1.2.3-1)
Section: debug
Priority: optional
Description: debug symbols for r-cran-glmmtmb
Build-Ids: 8d7c679c467f74ab9303964fd3d66d1e666a623e
drwxr-xr-x root/root 0 2021-09-23 09:22 ./
drwxr-xr-x root/root 0 2021-09-23 09:22 ./usr/
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lrwxrwxrwx root/root 0 2021-09-23 09:22 ./usr/share/doc/r-cran-glmmtmb-dbgsym -> r-cran-glmmtmb
r-cran-glmmtmb_1.1.2.3-1_armhf.deb
----------------------------------
new Debian package, version 2.0.
size 4389312 bytes: control archive=4144 bytes.
1363 bytes, 18 lines control
10148 bytes, 117 lines md5sums
Package: r-cran-glmmtmb
Version: 1.1.2.3-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 6287
Depends: r-base-core (>= 4.1.1-2), r-api-4.0, r-cran-tmb (>= 1.7.14), r-cran-lme4 (>= 1.1-18.9000), r-cran-matrix, r-cran-nlme, r-cran-numderiv, r-cran-rcppeigen, libc6 (>= 2.29), libgcc-s1 (>= 3.5), libgomp1 (>= 4.9), libstdc++6 (>= 5.2)
Recommends: r-cran-testthat, r-cran-pscl
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-mass, r-cran-lattice, r-cran-ggplot2 (>= 2.2.1), r-cran-mlmrev, r-cran-bbmle (>= 1.0.19), r-cran-coda, r-cran-reshape2, r-cran-car (>= 3.0.6), r-cran-emmeans (>= 1.4), r-cran-estimability, r-cran-multcomp, r-cran-effects (>= 4.0-1), r-cran-broom, r-cran-broom.mixed, r-cran-plyr, r-cran-png, r-cran-boot, r-cran-xtable
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=glmmTMB
Description: Generalized Linear Mixed Models using Template Model Builder
Fit linear and generalized linear mixed models with various
extensions, including zero-inflation. The models are fitted using maximum
likelihood estimation via 'TMB' (Template Model Builder). Random effects are
assumed to be Gaussian on the scale of the linear predictor and are integrated
out using the Laplace approximation. Gradients are calculated using automatic
differentiation.
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| Summary |
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Build Architecture: armhf
Build Type: any
Build-Space: 40084
Build-Time: 563
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 1024
Job: r-cran-glmmtmb_1.1.2.3-1
Machine Architecture: armhf
Package: r-cran-glmmtmb
Package-Time: 1628
Source-Version: 1.1.2.3-1
Space: 40084
Status: successful
Version: 1.1.2.3-1
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Finished at 2021-09-28T07:25:39Z
Build needed 00:27:08, 40084k disk space