r-cran-glmmtmb →
0.2.3-1 →
armhf → 2019-01-16 06:29:33
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| r-cran-glmmtmb 0.2.3-1 (armhf) Wed, 16 Jan 2019 06:13:30 +0000 |
+==============================================================================+
Package: r-cran-glmmtmb
Version: 0.2.3-1
Source Version: 0.2.3-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-07470eec-aeb6-42d5-958d-ff7df7ee0a07' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.1 MB]
Fetched 24.6 MB in 9s (2666 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-glmmtmb' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1766 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main r-cran-glmmtmb 0.2.3-1 (dsc) [2204 B]
Get:2 http://172.17.0.1/private buster-staging/main r-cran-glmmtmb 0.2.3-1 (tar) [1751 kB]
Get:3 http://172.17.0.1/private buster-staging/main r-cran-glmmtmb 0.2.3-1 (diff) [13.0 kB]
Fetched 1766 kB in 0s (6562 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-glmmtmb-zH3pmR/r-cran-glmmtmb-0.2.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-glmmtmb-zH3pmR' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-MZFOQq/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-MZFOQq/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-MZFOQq/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (10.8 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
libgpg-error-l10n libnss-systemd libpam-systemd libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 26 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15814 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 12~), dh-r, r-base-dev, r-cran-tmb, r-cran-lme4 (>= 1.1-18.9000), r-cran-matrix, r-cran-nlme, r-cran-rcppeigen
Filtered Build-Depends: debhelper (>= 12~), dh-r, r-base-dev, r-cran-tmb, r-cran-lme4 (>= 1.1-18.9000), r-cran-matrix, r-cran-nlme, r-cran-rcppeigen
dpkg-deb: building package 'sbuild-build-depends-r-cran-glmmtmb-dummy' in '/<<BUILDDIR>>/resolver-MZFOQq/apt_archive/sbuild-build-depends-r-cran-glmmtmb-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-glmmtmb-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Sources [544 B]
Get:5 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ Packages [628 B]
Fetched 2505 B in 0s (12.9 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-glmmtmb build dependencies (apt-based resolver)
--------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dbus dbus-user-session e2fsprogs-l10n krb5-locales libgpg-error-l10n
libnss-systemd libpam-systemd systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cpp-8 dctrl-tools
debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core g++-8 gcc-7-base gcc-8 gcc-8-base
gettext gettext-base gfortran gfortran-8 groff-base icu-devtools
intltool-debian libarchive-zip-perl libasan5 libatomic1 libblas-dev libblas3
libbsd0 libbz2-dev libcairo2 libcc1-0 libcroco3 libcurl4 libdatrie1 libelf1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgcc-8-dev libgcc1 libgfortran-8-dev libgfortran4
libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1 libncurses-dev
libncurses5-dev libnghttp2-14 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libstdc++-8-dev
libstdc++6 libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6
libtool libubsan1 libuchardet0 libwebp6 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db pkg-config po-debconf
r-base-core r-base-dev r-cran-lattice r-cran-littler r-cran-lme4 r-cran-mass
r-cran-matrix r-cran-minqa r-cran-nlme r-cran-nloptr r-cran-pkgkitten
r-cran-rcpp r-cran-rcppeigen r-cran-tmb ucf unzip x11-common xauth xdg-utils
zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-8-locales debtags dh-make gcc-8-doc libstdc++6-8-dbg
libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan5-dbg
liblsan0-dbg libtsan0-dbg libubsan1-dbg libmpx2-dbg libquadmath0-dbg
gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-8-doc
libgfortran5-dbg libcoarrays-dev groff liblapack-doc icu-doc liblzma-doc
ncurses-doc readline-doc libstdc++-8-doc tcl8.6 tk8.6 libtool-doc gcj-jdk
m4-doc apparmor less www-browser libmail-box-perl ess r-doc-info | r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
r-cran-getopt r-cran-inline r-cran-numderiv
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gcc-7-base gettext gettext-base gfortran
gfortran-8 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl4
libdatrie1 libelf1 libfile-stripnondeterminism-perl libfile-which-perl
libfontconfig1 libfreetype6 libfribidi0 libgfortran-8-dev libgfortran4
libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libice6 libicu-dev
libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1 libncurses-dev
libncurses5-dev libnghttp2-14 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libswitch-perl
libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0
libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6
littler m4 man-db pkg-config po-debconf r-base-core r-base-dev
r-cran-lattice r-cran-littler r-cran-lme4 r-cran-mass r-cran-matrix
r-cran-minqa r-cran-nlme r-cran-nloptr r-cran-pkgkitten r-cran-rcpp
r-cran-rcppeigen r-cran-tmb sbuild-build-depends-r-cran-glmmtmb-dummy ucf
unzip x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
cpp-8 g++-8 gcc-8 gcc-8-base libasan5 libatomic1 libcc1-0 libgcc-8-dev
libgcc1 libgomp1 libstdc++-8-dev libstdc++6 libubsan1
13 upgraded, 128 newly installed, 0 to remove and 13 not upgraded.
Need to get 114 MB/117 MB of archives.
After this operation, 258 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-MZFOQq/apt_archive ./ sbuild-build-depends-r-cran-glmmtmb-dummy 0.invalid.0 [916 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libubsan1 armhf 8.2.0-14+rpi1 [104 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf gcc-8-base armhf 8.2.0-14+rpi1 [189 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:8.2.0-14+rpi1 [36.5 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 8.2.0-14+rpi1 [63.9 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 8.2.0-14+rpi1 [8108 B]
Get:9 http://172.17.0.1/private buster-staging/main armhf libasan5 armhf 8.2.0-14+rpi1 [318 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf cpp-8 armhf 8.2.0-14+rpi1 [5475 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 8.2.0-14+rpi1 [30.1 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf g++-8 armhf 8.2.0-14+rpi1 [5941 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf gcc-8 armhf 8.2.0-14+rpi1 [5856 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libgcc-8-dev armhf 8.2.0-14+rpi1 [3754 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libstdc++-8-dev armhf 8.2.0-14+rpi1 [1565 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 8.2.0-14+rpi1 [324 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-1 [1231 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-6 [547 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.0-1 [12.6 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.2-3 [1076 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-5 [7976 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf debhelper all 12 [1002 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf unzip armhf 6.0-21 [149 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.26 [20.0 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.26 [17.5 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-14+rpi1 [206 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-2 [602 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.35.1-1 [70.8 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.62.0-1 [286 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3.1 [62.1 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-1 [170 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-1 [35.8 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-1 [50.9 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.13-6 [69.5 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.0-1 [1130 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.9+dfsg-1 [878 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-3 [235 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.9-1 [666 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.5.2-1 [23.6 MB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libgfortran-8-dev armhf 8.2.0-14+rpi1 [248 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf gfortran-8 armhf 8.2.0-14+rpi1 [5815 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:8.2.0-2+rpi1 [1432 B]
Get:91 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-2 [113 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-2 [1551 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20181013-1 [278 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.1+20181013-1 [940 B]
Get:95 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-5 [110 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-11+rpi1 [234 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-11+rpi1 [227 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-11+rpi1 [150 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-11+rpi1 [565 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.36-2 [280 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-9 [27.7 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-5 [166 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-5 [8845 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.5.2-1 [4480 B]
Get:108 http://172.17.0.1/private buster-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf dh-r all 20190110 [35.0 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libnlopt0 armhf 2.4.2+dfsg-8+b1 [133 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf r-cran-littler armhf 0.3.5-1+b1 [301 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf littler all 0.3.5-1 [13.4 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf r-cran-lattice armhf 0.20-38-1 [1120 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf r-cran-matrix armhf 1.2-15-1 [3356 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf r-cran-mass armhf 7.3-51.1-1 [1103 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf r-cran-nlme armhf 3.1.137-1+b1 [2202 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf r-cran-pkgkitten all 0.1.4-2 [22.4 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf r-cran-rcpp armhf 1.0.0-1+b1 [3356 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf r-cran-minqa armhf 1.2.4-1+b1 [101 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf r-cran-nloptr armhf 1.2.1-1 [279 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf r-cran-rcppeigen armhf 0.3.3.5.0-1 [1333 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf r-cran-lme4 armhf 1.1-19-1 [4906 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf r-cran-tmb armhf 1.7.15-1 [823 kB]
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No schema files found: removed existing output file.
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Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
All runlevel operations denied by policy
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Setting up xdg-utils (1.1.3-1) ...
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Setting up libpaper1:armhf (1.1.26) ...
Creating config file /etc/papersize with new version
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libjpeg-dev (1:1.5.2-2) ...
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Setting up libreadline-dev:armhf (7.0-5) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libgcc-8-dev:armhf (8.2.0-14+rpi1) ...
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Setting up libgfortran-8-dev:armhf (8.2.0-14+rpi1) ...
Setting up libxcb1:armhf (1.13.1-2) ...
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Setting up po-debconf (1.0.21) ...
Setting up libblas-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libx11-6:armhf (2:1.6.7-1) ...
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Setting up gcc-8 (8.2.0-14+rpi1) ...
Setting up g++-8 (8.2.0-14+rpi1) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up liblapack-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up gfortran-8 (8.2.0-14+rpi1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up gfortran (4:8.2.0-2+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libcairo2:armhf (1.16.0-2) ...
Setting up libtk8.6:armhf (8.6.9-1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up r-base-core (3.5.2-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-littler (0.3.5-1+b1) ...
Setting up littler (0.3.5-1) ...
Setting up r-base-dev (3.5.2-1) ...
Setting up r-cran-nloptr (1.2.1-1) ...
Setting up r-cran-pkgkitten (0.1.4-2) ...
Setting up r-cran-rcpp (1.0.0-1+b1) ...
Setting up r-cran-mass (7.3-51.1-1) ...
Setting up r-cran-lattice (0.20-38-1) ...
Setting up r-cran-nlme (3.1.137-1+b1) ...
Setting up r-cran-minqa (1.2.4-1+b1) ...
Setting up r-cran-matrix (1.2-15-1) ...
Setting up r-cran-rcppeigen (0.3.3.5.0-1) ...
Setting up r-cran-tmb (1.7.15-1) ...
Setting up r-cran-lme4 (1.1-19-1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.1.0-1) ...
Setting up debhelper (12) ...
Setting up dh-r (20190110) ...
Setting up sbuild-build-depends-r-cran-glmmtmb-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-2) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-14+rpi1 gcc-8_8.2.0-14+rpi1 libc6-dev_2.28-2 libstdc++-8-dev_8.2.0-14+rpi1 libstdc++6_8.2.0-14+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-14+rpi1 dash_0.5.10.2-4 dbus_1.12.12-1 dbus-user-session_1.12.12-1 dctrl-tools_2.24-3 debconf_1.5.69 debhelper_12 debianutils_4.8.6 dh-autoreconf_19 dh-r_20190110 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-1 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-14+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-7-base_7.3.0-19 gcc-8_8.2.0-14+rpi1 gcc-8-base_8.2.0-14+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2+rpi1 gfortran-8_8.2.0-14+rpi1 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.1-3 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 icu-devtools_63.1-5 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-2 krb5-locales_1.16.2-1 libacl1_2.2.52-3 libapparmor1_2.13.2-3 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-14+rpi1 libassuan0_2.5.2-1 libatomic1_8.2.0-14+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libbinutils_2.31.1-11+rpi1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-2 libc-dev-bin_2.28-2 libc6_2.28-2 libc6-dev_2.28-2 libcairo2_1.16.0-2 libcap-ng0_0.7.9-1+b1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-14+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.6-1 libcryptsetup4_2:1.7.5-1 libcurl4_7.62.0-1 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.12-1 libdebconfclient0_0.246 libdevmapper1.02.1_2:1.02.155-1 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libelf1_0.175-2 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.0-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3.1 libgcc-8-dev_8.2.0-14+rpi1 libgcc1_1:8.2.0-14+rpi1 libgcrypt20_1.8.4-4 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgfortran-8-dev_8.2.0-14+rpi1 libgfortran4_7.3.0-19 libgfortran5_8.2.0-14+rpi1 libglib2.0-0_2.58.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2+rpi1 libgomp1_8.2.0-14+rpi1 libgpg-error-l10n_1.33-3 libgpg-error0_1.33-3 libgraphite2-3_1.3.13-6 libgssapi-krb5-2_1.16.2-1 libharfbuzz0b_2.3.0-1 libhogweed4_3.4.1~rc1-1 libice6_2:1.0.9-2 libicu-dev_63.1-5 libicu63_63.1-5 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libip4tc0_1.8.2-3 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16.2-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-2 libkrb5-3_1.16.2-1 libkrb5support0_1.16.2-1 libksba8_1.3.5-2 liblapack-dev_3.8.0-2 liblapack3_3.8.0-2 libldap-2.4-2_2.4.47+dfsg-1 libldap-common_2.4.47+dfsg-1 liblz4-1_1.8.3-1 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-2 libncurses-dev_6.1+20181013-1 libncurses5_6.1+20181013-1 libncurses5-dev_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.35.1-1 libnlopt0_2.4.2+dfsg-8+b1 libnpth0_1.6-1 libnss-systemd_240-2+rpi1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam-systemd_240-2+rpi1 libpam0g_1.1.8-3.8 libpango-1.0-0_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libpaper-utils_1.1.26 libpaper1_1.1.26 libpcre16-3_2:8.39-11+rpi1 libpcre3_2:8.39-11+rpi1 libpcre3-dev_2:8.39-11+rpi1 libpcre32-3_2:8.39-11+rpi1 libpcrecpp0v5_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpixman-1-0_0.36.0-1 libplymouth4_0.9.4-1 libpng-dev_1.6.36-2 libpng16-16_1.6.36-2 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libreadline-dev_7.0-5 libreadline7_7.0-5 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3+b1 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-14+rpi1 libstdc++6_8.2.0-14+rpi1 libswitch-perl_2.17-2 libsystemd0_240-2+rpi1 libtasn1-6_4.13-3 libtcl8.6_8.6.9+dfsg-1 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtk8.6_8.6.9-1 libtool_2.4.6-6 libubsan1_8.2.0-14+rpi1 libuchardet0_0.0.6-3 libudev1_240-2+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.4+dfsg1-7+b1 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1 libzstd1_1.3.8+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 littler_0.3.5-1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-1 mawk_1.3.3-17 mount_2.33.1-0.1 multiarch-support_2.28-2 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 r-base-core_3.5.2-1 r-base-dev_3.5.2-1 r-cran-lattice_0.20-38-1 r-cran-littler_0.3.5-1+b1 r-cran-lme4_1.1-19-1 r-cran-mass_7.3-51.1-1 r-cran-matrix_1.2-15-1 r-cran-minqa_1.2.4-1+b1 r-cran-nlme_3.1.137-1+b1 r-cran-nloptr_1.2.1-1 r-cran-pkgkitten_0.1.4-2 r-cran-rcpp_1.0.0-1+b1 r-cran-rcppeigen_0.3.3.5.0-1 r-cran-tmb_1.7.15-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-glmmtmb-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-2+rpi1 systemd-sysv_240-2+rpi1 sysvinit-utils_2.93-3 tar_1.30+dfsg-4 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-2+rpi1 unzip_6.0-21 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xauth_1:1.0.10-1 xdg-utils_1.1.3-1 xz-utils_5.2.2-1.3 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Jan 14 07:40:49 2019 UTC
gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: issuer "daissi@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-glmmtmb_0.2.3-1.dsc
dpkg-source: info: extracting r-cran-glmmtmb in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-glmmtmb_0.2.3.orig.tar.gz
dpkg-source: info: unpacking r-cran-glmmtmb_0.2.3-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-07470eec-aeb6-42d5-958d-ff7df7ee0a07
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-glmmtmb
dpkg-buildpackage: info: source version 0.2.3-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules build-arch
dh build-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: testthat, pscl
I: R Package: glmmTMB Version: 0.2.3
I: Building using R version 3.5.2-1
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Mon, 14 Jan 2019 08:16:56 +0100
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-glmmtmb/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-glmmtmb/usr/lib/R/site-library --clean . "--built-timestamp='Mon, 14 Jan 2019 08:16:56 +0100'"
* installing *source* package 'glmmTMB' ...
** package 'glmmTMB' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/TMB/include" -I"/usr/lib/R/site-library/RcppEigen/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-xoRi9J/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glmmTMB.cpp -o glmmTMB.o
In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:368,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1,
from /usr/lib/R/site-library/TMB/include/TMB.hpp:53,
from glmmTMB.cpp:1:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function 'void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<CppAD::AD<double> >; Type = CppAD::AD<double>]':
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:17: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
while(size) ptr[--size].~T();
^~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:5: note: within this loop
while(size) ptr[--size].~T();
^~~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function 'void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<double>; Type = double]':
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:17: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
while(size) ptr[--size].~T();
^~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:5: note: within this loop
while(size) ptr[--size].~T();
^~~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function 'void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<CppAD::AD<CppAD::AD<double> > >; Type = CppAD::AD<CppAD::AD<double> >]':
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:17: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
while(size) ptr[--size].~T();
^~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:5: note: within this loop
while(size) ptr[--size].~T();
^~~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function 'void report_stack<Type>::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector<CppAD::AD<CppAD::AD<CppAD::AD<double> > > >; Type = CppAD::AD<CppAD::AD<CppAD::AD<double> > >]':
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:17: warning: iteration 536870912 invokes undefined behavior [-Waggressive-loop-optimizations]
while(size) ptr[--size].~T();
^~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:5: note: within this loop
while(size) ptr[--size].~T();
^~~~~
In file included from /usr/include/c++/8/vector:69,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:15,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26,
from /usr/lib/R/site-library/TMB/include/TMB.hpp:54,
from glmmTMB.cpp:1:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<CppAD::AD<double>, int>}; _Tp = Eigen::Triplet<CppAD::AD<double>, int>; _Alloc = std::allocator<Eigen::Triplet<CppAD::AD<double>, int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Eigen::Triplet<CppAD::AD<double>, int>, std::allocator<Eigen::Triplet<CppAD::AD<double>, int> > >::iterator' {aka '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<double>, int>*, std::vector<Eigen::Triplet<CppAD::AD<double>, int>, std::allocator<Eigen::Triplet<CppAD::AD<double>, int> > > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<double, int>}; _Tp = Eigen::Triplet<double, int>; _Alloc = std::allocator<Eigen::Triplet<double, int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > >::iterator' {aka '__gnu_cxx::__normal_iterator<Eigen::Triplet<double, int>*, std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > >::iterator' {aka '__gnu_cxx::__normal_iterator<Eigen::Triplet<double, int>*, std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In function 'Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<double>, int>*, std::vector<Eigen::Triplet<CppAD::AD<double>, int>, std::allocator<Eigen::Triplet<CppAD::AD<double>, int> > > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = double]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Eigen::Triplet<double, int>*, std::vector<Eigen::Triplet<double, int>, std::allocator<Eigen::Triplet<double, int> > > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>}; _Tp = Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>; _Alloc = std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> > >::iterator' {aka '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> > > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>}; _Tp = Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>; _Alloc = std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > >::iterator' {aka '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > >::iterator' {aka '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In function 'Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD<CppAD::AD<double> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<double> >, int> > > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'Eigen::SparseMatrix<Scalar> tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD<CppAD::AD<CppAD::AD<double> > >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>*, std::vector<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int>, std::allocator<Eigen::Triplet<CppAD::AD<CppAD::AD<CppAD::AD<double> > >, int> > > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o glmmTMB.so glmmTMB.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-glmmtmb/usr/lib/R/site-library/glmmTMB/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (glmmTMB)
W: Ignoring specified R dependency: R (>= 3.2.0)
I: Using r-cran-testthat for Recommends:testthat
I: Using r-cran-pscl for Recommends:pscl
I: Using r-cran-knitr for Suggests:knitr
I: Using r-cran-rmarkdown for Suggests:rmarkdown
I: Using r-cran-mass for Suggests:MASS
I: Using r-cran-lattice for Suggests:lattice
I: Using r-cran-ggplot2 for Suggests:ggplot2 (>= 2.2.1)
I: Using r-cran-mlmrev for Suggests:mlmRev
I: Using r-cran-bbmle for Suggests:bbmle (>= 1.0.19)
I: Using r-cran-coda for Suggests:coda
I: Using r-cran-reshape2 for Suggests:reshape2
I: Using r-cran-car for Suggests:car
I: Using r-cran-emmeans for Suggests:emmeans
I: Using r-cran-estimability for Suggests:estimability
W: Cannot find a debian package for Suggests:DHARMa
I: Using r-cran-multcomp for Suggests:multcomp
W: Cannot find a debian package for Suggests:MuMIn
I: Using r-cran-effects for Suggests:effects
W: Cannot find a debian package for Suggests:dotwhisker
I: Using r-cran-broom for Suggests:broom
I: Using r-cran-plyr for Suggests:plyr
I: Using r-cran-png for Suggests:png
I: Using r-cran-boot for Suggests:boot
I: Using r-cran-tmb for Imports:TMB (>= 1.7.13)
I: Using r-cran-lme4 for Imports:lme4 (>= 1.1-18.9000)
I: Using r-cran-matrix for Imports:Matrix
I: Using r-cran-nlme for Imports:nlme
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_dwz -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-glmmtmb' in '../r-cran-glmmtmb_0.2.3-1_armhf.deb'.
dpkg-deb: building package 'r-cran-glmmtmb-dbgsym' in '../r-cran-glmmtmb-dbgsym_0.2.3-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../r-cran-glmmtmb_0.2.3-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-01-16T06:29:30Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-glmmtmb_0.2.3-1_armhf.changes:
-------------------------------------
Format: 1.8
Date: Mon, 14 Jan 2019 08:16:56 +0100
Source: r-cran-glmmtmb
Binary: r-cran-glmmtmb
Architecture: armhf
Version: 0.2.3-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
r-cran-glmmtmb - Generalized Linear Mixed Models using Template Model Builder
Changes:
r-cran-glmmtmb (0.2.3-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
* debhelper 12
* Standards-Version: 4.3.0
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Files:
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f8fcad7ab83359aab0910d9edbd2cd78 7953 gnu-r optional r-cran-glmmtmb_0.2.3-1_armhf.buildinfo
fc642b96b1db08f5f4997fb628cc1cb7 2290536 gnu-r optional r-cran-glmmtmb_0.2.3-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-glmmtmb-dbgsym_0.2.3-1_armhf.deb
---------------------------------------
new Debian package, version 2.0.
size 10958708 bytes: control archive=536 bytes.
394 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-glmmtmb-dbgsym
Source: r-cran-glmmtmb
Version: 0.2.3-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 11017
Depends: r-cran-glmmtmb (= 0.2.3-1)
Section: debug
Priority: optional
Description: debug symbols for r-cran-glmmtmb
Build-Ids: d4ad1040cdf8e6d390975262b29c48f3ad864365
drwxr-xr-x root/root 0 2019-01-14 07:16 ./
drwxr-xr-x root/root 0 2019-01-14 07:16 ./usr/
drwxr-xr-x root/root 0 2019-01-14 07:16 ./usr/lib/
drwxr-xr-x root/root 0 2019-01-14 07:16 ./usr/lib/debug/
drwxr-xr-x root/root 0 2019-01-14 07:16 ./usr/lib/debug/.build-id/
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drwxr-xr-x root/root 0 2019-01-14 07:16 ./usr/share/
drwxr-xr-x root/root 0 2019-01-14 07:16 ./usr/share/doc/
lrwxrwxrwx root/root 0 2019-01-14 07:16 ./usr/share/doc/r-cran-glmmtmb-dbgsym -> r-cran-glmmtmb
r-cran-glmmtmb_0.2.3-1_armhf.deb
--------------------------------
new Debian package, version 2.0.
size 2290536 bytes: control archive=3204 bytes.
1241 bytes, 18 lines control
6981 bytes, 82 lines md5sums
Package: r-cran-glmmtmb
Version: 0.2.3-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 3651
Depends: r-base-core (>= 3.5.2-1), r-api-3.5, r-cran-tmb (>= 1.7.13), r-cran-lme4 (>= 1.1-18.9000), r-cran-matrix, r-cran-nlme, libc6 (>= 2.23), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2)
Recommends: r-cran-testthat, r-cran-pscl
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-mass, r-cran-lattice, r-cran-ggplot2 (>= 2.2.1), r-cran-mlmrev, r-cran-bbmle (>= 1.0.19), r-cran-coda, r-cran-reshape2, r-cran-car, r-cran-emmeans, r-cran-estimability, r-cran-multcomp, r-cran-effects, r-cran-broom, r-cran-plyr, r-cran-png, r-cran-boot
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=glmmTMB
Description: Generalized Linear Mixed Models using Template Model Builder
Fit linear and generalized linear mixed models with various
extensions, including zero-inflation. The models are fitted using maximum
likelihood estimation via 'TMB' (Template Model Builder). Random effects are
assumed to be Gaussian on the scale of the linear predictor and are integrated
out using the Laplace approximation. Gradients are calculated using automatic
differentiation.
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| Summary |
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Build Architecture: armhf
Build-Space: 30724
Build-Time: 359
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 584
Job: r-cran-glmmtmb_0.2.3-1
Machine Architecture: armhf
Package: r-cran-glmmtmb
Package-Time: 960
Source-Version: 0.2.3-1
Space: 30724
Status: successful
Version: 0.2.3-1
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Finished at 2019-01-16T06:29:30Z
Build needed 00:16:00, 30724k disk space