Build log for r-bioc-tfbstools (1.36.0+dfsg-2+b3) on armhf

r-bioc-tfbstools → 1.36.0+dfsg-2+b3 → armhf → 2023-10-24 10:44:50

sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023

+==============================================================================+
| r-bioc-tfbstools 1.36.0+dfsg-2+b3 (armhf)    Tue, 24 Oct 2023 10:40:16 +0000 |
+==============================================================================+

Package: r-bioc-tfbstools
Version: 1.36.0+dfsg-2+b3
Source Version: 1.36.0+dfsg-2
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-0f1caf38-4e51-4198-8d3b-8104162436ac' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-eMqkrC/resolver-xS7FGB' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.2 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [14.9 MB]
Fetched 29.1 MB in 5s (5475 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'r-bioc-tfbstools' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 124 kB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main r-bioc-tfbstools 1.36.0+dfsg-2 (dsc) [2473 B]
Get:2 http://172.17.4.1/private trixie-staging/main r-bioc-tfbstools 1.36.0+dfsg-2 (tar) [118 kB]
Get:3 http://172.17.4.1/private trixie-staging/main r-bioc-tfbstools 1.36.0+dfsg-2 (diff) [3684 B]
Fetched 124 kB in 0s (1447 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-eMqkrC/r-bioc-tfbstools-1.36.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-eMqkrC' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase, r-bioc-biostrings, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-bsgenome, r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb, r-bioc-genomicranges, r-cran-gtools, r-bioc-iranges, r-cran-dbi, r-cran-rsqlite, r-bioc-rtracklayer, r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase, r-bioc-biostrings, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-bsgenome, r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb, r-bioc-genomicranges, r-cran-gtools, r-bioc-iranges, r-cran-dbi, r-cran-rsqlite, r-bioc-rtracklayer, r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [612 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [989 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1022 B]
Fetched 2623 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
  dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
  fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext
  gettext-base gfortran gfortran-12 groff-base icu-devtools intltool-debian
  libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl
  libb-hooks-op-check-perl libblas-dev libblas3 libboost1.81-dev libbrotli1
  libbsd0 libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
  libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4
  libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0
  libdevel-callchecker-perl libdevel-globaldestruction-perl
  libdevel-overloadinfo-perl libdevel-stacktrace-perl
  libdist-checkconflicts-perl libdynaloader-functions-perl libelf1
  libencode-locale-perl libeval-closure-perl libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-12-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgsl27 libgslcblas0 libharfbuzz0b libhttp-date-perl
  libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libjbig0
  libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3
  liblerc4 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1
  libmodule-implementation-perl libmodule-runtime-conflicts-perl
  libmodule-runtime-perl libmoose-perl libmro-compat-perl
  libnamespace-clean-perl libncurses-dev libncurses6 libncursesw6
  libnghttp2-14 libpackage-deprecationmanager-perl libpackage-stash-perl
  libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl
  libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
  libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpng16-16 libpsl5
  libreadline-dev librtmp1 libsharpyuv0 libsm6 libssh2-1 libsub-exporter-perl
  libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
  libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data
  libthai0 libtiff6 libtimedate-perl libtinfo6 libtk8.6 libtool
  libtry-tiny-perl libuchardet0 liburi-perl libvariable-magic-perl libwebp7
  libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6
  libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
  libxmuu1 libxrender1 libxss1 libxt6 m4 man-db ncurses-base ncurses-bin
  openssl pkg-config pkgconf pkgconf-bin po-debconf r-base-core r-base-dev
  r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics
  r-bioc-biocio r-bioc-biocparallel r-bioc-biostrings r-bioc-bsgenome
  r-bioc-cner r-bioc-delayedarray r-bioc-dirichletmultinomial
  r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments
  r-bioc-genomicranges r-bioc-go.db r-bioc-iranges r-bioc-keggrest
  r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
  r-bioc-s4arrays r-bioc-s4vectors r-bioc-seqlogo r-bioc-summarizedexperiment
  r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-bh
  r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem
  r-cran-catools r-cran-cli r-cran-clipr r-cran-codetools r-cran-colorspace
  r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-fansi r-cran-farver
  r-cran-fastmap r-cran-formatr r-cran-futile.logger r-cran-futile.options
  r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools r-cran-hms
  r-cran-httr r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lambda.r
  r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass
  r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime
  r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig
  r-cran-pkgkitten r-cran-plogr r-cran-plyr r-cran-png r-cran-powerlaw
  r-cran-pracma r-cran-prettyunits r-cran-progress r-cran-r.methodss3
  r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp
  r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-restfulr r-cran-rjson
  r-cran-rlang r-cran-rsqlite r-cran-scales r-cran-snow r-cran-stringi
  r-cran-stringr r-cran-sys r-cran-tfmpvalue r-cran-tibble r-cran-tidyselect
  r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-vroom
  r-cran-withr r-cran-xml r-cran-xtable r-cran-yaml sensible-utils ucf unzip
  x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc debtags dh-make
  postgresql-client-common gettext-doc libasprintf-dev libgettextpo-dev
  gfortran-doc gfortran-12-doc libcoarrays-dev groff liblapack-doc
  libboost1.81-doc libboost-atomic1.81-dev libboost-chrono1.81-dev
  libboost-container1.81-dev libboost-context1.81-dev
  libboost-contract1.81-dev libboost-coroutine1.81-dev
  libboost-date-time1.81-dev libboost-exception1.81-dev libboost-fiber1.81-dev
  libboost-filesystem1.81-dev libboost-graph1.81-dev
  libboost-graph-parallel1.81-dev libboost-iostreams1.81-dev
  libboost-locale1.81-dev libboost-log1.81-dev libboost-math1.81-dev
  libboost-mpi1.81-dev libboost-mpi-python1.81-dev libboost-numpy1.81-dev
  libboost-program-options1.81-dev libboost-python1.81-dev
  libboost-random1.81-dev libboost-regex1.81-dev
  libboost-serialization1.81-dev libboost-stacktrace1.81-dev
  libboost-system1.81-dev libboost-test1.81-dev libboost-thread1.81-dev
  libboost-timer1.81-dev libboost-type-erasure1.81-dev libboost-wave1.81-dev
  libboost1.81-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.81-dev
  low-memory-monitor gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html
  icu-doc liblzma-doc ncurses-doc libscalar-number-perl readline-doc tcl8.6
  tk8.6 libtool-doc gcj-jdk libbusiness-isbn-perl libregexp-ipv6-perl
  libwww-perl libcurl4-gnutls-dev m4-doc apparmor less www-browser
  libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
  texlive-base texlive-latex-base texlive-plain-generic
  texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
  texlive-latex-recommended texlive-latex-extra texinfo r-bioc-genefilter
  r-bioc-org.hs.eg.db r-cran-runit r-bioc-graph r-bioc-biocstyle r-cran-knitr
  r-bioc-all r-bioc-affy r-bioc-deseq2 r-cran-testthat r-cran-rmarkdown
  r-cran-foreach r-cran-bbmisc r-cran-doparallel r-bioc-variantannotation
  r-bioc-shortread r-cran-batchtools r-cran-data.table r-bioc-genomicfeatures
  r-cran-biocmanager r-bioc-gviz r-bioc-hdf5array r-cran-lobstr
  r-bioc-delayedmatrixstats r-bioc-edger r-bioc-annotationhub r-bioc-dexseq
  r-cran-digest r-cran-markdown r-bioc-sparsematrixstats r-bioc-limma
  r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-rpart r-cran-callr
  r-cran-htmltools r-cran-htmlwidgets r-cran-processx r-cran-ps
  r-cran-rprojroot r-cran-rstudioapi r-cran-whoami r-cran-kernsmooth
  r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs
  r-cran-dplyr r-cran-jpeg r-cran-viridis r-cran-rmysql r-cran-unitizer
  r-cran-forcats r-cran-waldo r-cran-lubridate r-cran-magick r-cran-sf
  r-cran-lintr r-cran-tidyverse r-cran-getopt r-cran-base64enc
  r-cran-r.devices r-cran-r.rsp r-cran-formattable r-cran-nanotime
  r-cran-palmerpenguins r-cran-survival r-cran-units r-cran-vdiffr
  r-cran-quadprog r-cran-inline r-cran-fs r-cran-usethis r-cran-gert r-cran-gh
  r-cran-rvest r-cran-xml2 r-cran-dichromat r-cran-rmpi r-cran-rlecuyer
  r-cran-spelling r-cran-bench r-cran-brio r-cran-evaluate r-cran-here
  r-cran-pkgbuild r-cran-pkgload r-cran-purrr r-cran-tidyr r-cran-plm
  r-cran-zoo
Recommended packages:
  devscripts cme git-buildpackage curl | wget | lynx bzip2-doc
  libclass-c3-xs-perl libdevel-lexalias-perl libarchive-cpio-perl
  libglib2.0-data shared-mime-info xdg-user-dirs libio-compress-brotli-perl
  libdevel-partialdump-perl libgpm2 libpng-tools publicsuffix libltdl-dev
  libmail-sendmail-perl r-recommended r-doc-html r-bioc-biovizbase
  r-cran-testthat r-cran-mockery r-cran-bench r-cran-brio r-cran-callr
  r-cran-covr r-cran-decor r-cran-desc r-cran-knitr r-cran-lobstr
  r-cran-rmarkdown r-cran-spelling r-cran-httpuv r-cran-webutils r-cran-testit
  r-cran-survival r-cran-dplyr r-cran-hexbin r-cran-hmisc r-cran-mapproj
  r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg
  r-cran-rpart r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-xml2 r-cran-jpeg
  r-cran-r.rsp r-cran-runit r-cran-digest r-cran-sodium r-cran-lubridate
  r-cran-doparallel r-cran-foreach r-cran-iterators r-cran-itertools
  r-cran-dbitest r-cran-htmltools r-cran-htmlwidgets r-cran-data.table
  r-cran-mockr r-cran-formattable r-cran-generics r-cran-pkgdown r-cran-waldo
  r-cran-zeallot libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
  x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
  dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
  fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext
  gettext-base gfortran gfortran-12 groff-base icu-devtools intltool-debian
  libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl
  libb-hooks-op-check-perl libblas-dev libblas3 libboost1.81-dev libbrotli1
  libbsd0 libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
  libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4
  libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0
  libdevel-callchecker-perl libdevel-globaldestruction-perl
  libdevel-overloadinfo-perl libdevel-stacktrace-perl
  libdist-checkconflicts-perl libdynaloader-functions-perl libelf1
  libencode-locale-perl libeval-closure-perl libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-12-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgsl27 libgslcblas0 libharfbuzz0b libhttp-date-perl
  libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libjbig0
  libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3
  liblerc4 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1
  libmodule-implementation-perl libmodule-runtime-conflicts-perl
  libmodule-runtime-perl libmoose-perl libmro-compat-perl
  libnamespace-clean-perl libncurses-dev libncurses6 libnghttp2-14
  libpackage-deprecationmanager-perl libpackage-stash-perl
  libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl
  libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
  libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpng16-16 libpsl5
  libreadline-dev librtmp1 libsharpyuv0 libsm6 libssh2-1 libsub-exporter-perl
  libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
  libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data
  libthai0 libtiff6 libtimedate-perl libtk8.6 libtool libtry-tiny-perl
  libuchardet0 liburi-perl libvariable-magic-perl libwebp7 libwww-curl-perl
  libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0
  libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
  libxss1 libxt6 m4 man-db openssl pkg-config pkgconf pkgconf-bin po-debconf
  r-base-core r-base-dev r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase
  r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biostrings
  r-bioc-bsgenome r-bioc-cner r-bioc-delayedarray r-bioc-dirichletmultinomial
  r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments
  r-bioc-genomicranges r-bioc-go.db r-bioc-iranges r-bioc-keggrest
  r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
  r-bioc-s4arrays r-bioc-s4vectors r-bioc-seqlogo r-bioc-summarizedexperiment
  r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-bh
  r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem
  r-cran-catools r-cran-cli r-cran-clipr r-cran-codetools r-cran-colorspace
  r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-fansi r-cran-farver
  r-cran-fastmap r-cran-formatr r-cran-futile.logger r-cran-futile.options
  r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools r-cran-hms
  r-cran-httr r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lambda.r
  r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass
  r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime
  r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig
  r-cran-pkgkitten r-cran-plogr r-cran-plyr r-cran-png r-cran-powerlaw
  r-cran-pracma r-cran-prettyunits r-cran-progress r-cran-r.methodss3
  r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp
  r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-restfulr r-cran-rjson
  r-cran-rlang r-cran-rsqlite r-cran-scales r-cran-snow r-cran-stringi
  r-cran-stringr r-cran-sys r-cran-tfmpvalue r-cran-tibble r-cran-tidyselect
  r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-vroom
  r-cran-withr r-cran-xml r-cran-xtable r-cran-yaml
  sbuild-build-depends-main-dummy sensible-utils ucf unzip x11-common xauth
  xdg-utils zip zlib1g-dev
The following packages will be upgraded:
  libncursesw6 libtinfo6 ncurses-base ncurses-bin
4 upgraded, 285 newly installed, 0 to remove and 2 not upgraded.
Need to get 247 MB of archives.
After this operation, 725 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1016 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf ncurses-bin armhf 6.4+20231016-1 [419 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf ncurses-base all 6.4+20231016-1 [266 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf libtinfo6 armhf 6.4+20231016-1 [324 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libncursesw6 armhf 6.4+20231016-1 [106 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.2-4 [80.8 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.11.2-3 [1342 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf sensible-utils all 0.0.20 [19.3 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf openssl armhf 3.0.11-1 [1367 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf ca-certificates all 20230311 [153 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-13 [156 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf ucf all 3.0043+nmu1 [55.2 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-13 [496 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.7 [82.1 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:30 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:32 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-4 [9009 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-13 [1201 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.7 [956 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf zip armhf 3.0-13 [207 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf unzip armhf 6.0-28 [147 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf libpaper1 armhf 1.1.29 [11.9 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf libpaper-utils armhf 1.1.29 [8416 B]
Get:44 http://172.17.4.1/private trixie-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:47 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.0.9-2+b3 [258 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf libpng16-16 armhf 1.6.40-2 [258 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [366 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf fontconfig-config armhf 2.14.2-6 [316 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf libfontconfig1 armhf 2.14.2-6 [367 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf libbsd0 armhf 0.11.7-4 [111 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf libx11-data all 2:1.8.7-1 [328 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf libx11-6 armhf 2:1.8.7-1 [729 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:65 http://172.17.4.1/private trixie-staging/main armhf libcairo2 armhf 1.18.0-1 [425 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.57.0-1 [61.6 kB]
Get:67 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-2 [195 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf libcurl4 armhf 8.4.0-2 [363 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.78.0-2+rpi1 [1249 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 13.2.0-4+rpi1 [247 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf fontconfig armhf 2.14.2-6 [461 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.0.1-1 [2098 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf libpango-1.0-0 armhf 1.51.0+ds-2 [187 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf libpangoft2-1.0-0 armhf 1.51.0+ds-2 [40.4 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf libpangocairo-1.0-0 armhf 1.51.0+ds-2 [30.0 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [904 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-3 [133 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libsharpyuv0 armhf 1.3.2-0.3 [106 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.3.2-0.3 [261 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-1 [298 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf libtk8.6 armhf 8.6.13-2 [680 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf libxt6 armhf 1:1.2.1-1.1 [155 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf r-base-core armhf 4.3.1-4 [26.3 MB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf libgfortran-12-dev armhf 12.3.0-10+rpi1 [285 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf gfortran-12 armhf 12.3.0-10+rpi1 [7527 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf gfortran armhf 4:12.2.0-3+rpi1 [1424 B]
Get:103 http://172.17.4.1/private trixie-staging/main armhf libblas-dev armhf 3.11.0-2 [106 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf liblapack-dev armhf 3.11.0-2 [3007 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libncurses6 armhf 6.4+20231016-1 [80.0 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libncurses-dev armhf 6.4+20231016-1 [290 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf libreadline-dev armhf 8.2-1.3 [123 kB]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo-dev armhf 1:2.1.5-2 [258 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf libjpeg-dev armhf 1:2.1.5-2 [71.8 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf libpcre2-16-0 armhf 10.42-4 [211 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf libpcre2-32-0 armhf 10.42-4 [201 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf libpcre2-posix3 armhf 10.42-4 [55.1 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf libpcre2-dev armhf 10.42-4 [648 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf libpng-dev armhf 1.6.40-2 [336 kB]
Get:116 http://172.17.4.1/private trixie-staging/main armhf libbz2-dev armhf 1.0.8-5+b2 [26.8 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf liblzma-dev armhf 5.4.4-0.1 [269 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf icu-devtools armhf 72.1-4 [174 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf libicu-dev armhf 72.1-4 [9956 kB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf libxmuu1 armhf 2:1.1.3-3 [23.3 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf xauth armhf 1:1.1.2-1 [32.4 kB]
Get:122 http://172.17.4.1/private trixie-staging/main armhf libpkgconf3 armhf 1.8.1-1 [31.3 kB]
Get:123 http://172.17.4.1/private trixie-staging/main armhf pkgconf-bin armhf 1.8.1-1 [27.8 kB]
Get:124 http://172.17.4.1/private trixie-staging/main armhf pkgconf armhf 1.8.1-1 [25.9 kB]
Get:125 http://172.17.4.1/private trixie-staging/main armhf pkg-config armhf 1.8.1-1 [13.7 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf r-base-dev all 4.3.1-4 [4512 B]
Get:127 http://172.17.4.1/private trixie-staging/main armhf libfile-which-perl all 1.27-2 [15.1 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf libswitch-perl all 2.17-3 [20.3 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf libclone-perl armhf 0.46-1 [13.2 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf libencode-locale-perl all 1.05-3 [12.9 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf libhttp-date-perl all 6.05-2 [10.5 kB]
Get:133 http://172.17.4.1/private trixie-staging/main armhf libio-html-perl all 1.004-3 [16.2 kB]
Get:134 http://172.17.4.1/private trixie-staging/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get:135 http://172.17.4.1/private trixie-staging/main armhf liburi-perl all 5.21-1 [95.6 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf libhttp-message-perl all 6.44-2 [81.8 kB]
Get:137 http://172.17.4.1/private trixie-staging/main armhf libparams-util-perl armhf 1.102-2+b1 [23.9 kB]
Get:138 http://172.17.4.1/private trixie-staging/main armhf libsub-install-perl all 0.929-1 [10.5 kB]
Get:139 http://172.17.4.1/private trixie-staging/main armhf libdata-optlist-perl all 0.114-1 [10.6 kB]
Get:140 http://172.17.4.1/private trixie-staging/main armhf libb-hooks-op-check-perl armhf 0.22-2+b1 [10.3 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf libdynaloader-functions-perl all 0.003-3 [12.7 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf libdevel-callchecker-perl armhf 0.008-2 [15.8 kB]
Get:143 http://172.17.4.1/private trixie-staging/main armhf libparams-classify-perl armhf 0.015-2+b1 [22.0 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:145 http://172.17.4.1/private trixie-staging/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf libpackage-stash-perl all 0.40-1 [22.0 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf libclass-load-perl all 0.25-2 [15.3 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf libclass-load-xs-perl armhf 0.10-2+b1 [13.8 kB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get:151 http://172.17.4.1/private trixie-staging/main armhf libdevel-globaldestruction-perl all 0.14-4 [7144 B]
Get:152 http://172.17.4.1/private trixie-staging/main armhf libalgorithm-c3-perl all 0.11-2 [10.8 kB]
Get:153 http://172.17.4.1/private trixie-staging/main armhf libclass-c3-perl all 0.35-2 [21.0 kB]
Get:154 http://172.17.4.1/private trixie-staging/main armhf libmro-compat-perl all 0.15-2 [11.8 kB]
Get:155 http://172.17.4.1/private trixie-staging/main armhf libdevel-overloadinfo-perl all 0.007-1 [7896 B]
Get:156 http://172.17.4.1/private trixie-staging/main armhf libdevel-stacktrace-perl all 2.0400-2 [26.8 kB]
Get:157 http://172.17.4.1/private trixie-staging/main armhf libsub-exporter-perl all 0.990-1 [50.6 kB]
Get:158 http://172.17.4.1/private trixie-staging/main armhf libeval-closure-perl all 0.14-3 [11.2 kB]
Get:159 http://172.17.4.1/private trixie-staging/main armhf libdist-checkconflicts-perl all 0.11-2 [10.5 kB]
Get:160 http://172.17.4.1/private trixie-staging/main armhf libmodule-runtime-conflicts-perl all 0.003-2 [7356 B]
Get:161 http://172.17.4.1/private trixie-staging/main armhf libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB]
Get:162 http://172.17.4.1/private trixie-staging/main armhf libpackage-stash-xs-perl armhf 0.30-1+b1 [18.2 kB]
Get:163 http://172.17.4.1/private trixie-staging/main armhf libmoose-perl armhf 2.2206-1 [795 kB]
Get:164 http://172.17.4.1/private trixie-staging/main armhf libvariable-magic-perl armhf 0.63-1+b1 [41.6 kB]
Get:165 http://172.17.4.1/private trixie-staging/main armhf libb-hooks-endofscope-perl all 0.26-1 [19.6 kB]
Get:166 http://172.17.4.1/private trixie-staging/main armhf libsub-identify-perl armhf 0.14-3 [10.6 kB]
Get:167 http://172.17.4.1/private trixie-staging/main armhf libsub-name-perl armhf 0.27-1 [12.0 kB]
Get:168 http://172.17.4.1/private trixie-staging/main armhf libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get:169 http://172.17.4.1/private trixie-staging/main armhf libcurl3-gnutls armhf 8.4.0-2 [358 kB]
Get:170 http://172.17.4.1/private trixie-staging/main armhf libwww-curl-perl armhf 4.17-10 [55.8 kB]
Get:171 http://172.17.4.1/private trixie-staging/main armhf libwww-curl-simple-perl all 0.100191-3 [12.6 kB]
Get:172 http://172.17.4.1/private trixie-staging/main armhf dh-r all 20230912 [40.8 kB]
Get:173 http://172.17.4.1/private trixie-staging/main armhf libboost1.81-dev armhf 1.81.0-7 [10.4 MB]
Get:174 http://172.17.4.1/private trixie-staging/main armhf libgslcblas0 armhf 2.7.1+dfsg-6 [79.3 kB]
Get:175 http://172.17.4.1/private trixie-staging/main armhf libgsl27 armhf 2.7.1+dfsg-6 [753 kB]
Get:176 http://172.17.4.1/private trixie-staging/main armhf r-bioc-biocgenerics all 0.46.0-1 [594 kB]
Get:177 http://172.17.4.1/private trixie-staging/main armhf r-bioc-biobase armhf 2.60.0-1 [2126 kB]
Get:178 http://172.17.4.1/private trixie-staging/main armhf r-bioc-s4vectors armhf 0.38.2+dfsg-1 [2047 kB]
Get:179 http://172.17.4.1/private trixie-staging/main armhf r-bioc-iranges armhf 2.34.1-1 [2247 kB]
Get:180 http://172.17.4.1/private trixie-staging/main armhf r-cran-dbi all 1.1.3-1 [687 kB]
Get:181 http://172.17.4.1/private trixie-staging/main armhf r-cran-bit armhf 4.0.5-1 [1066 kB]
Get:182 http://172.17.4.1/private trixie-staging/main armhf r-cran-bit64 armhf 4.0.5-1 [463 kB]
Get:183 http://172.17.4.1/private trixie-staging/main armhf r-cran-rlang armhf 1.1.1-1 [1653 kB]
Get:184 http://172.17.4.1/private trixie-staging/main armhf r-cran-cli armhf 3.6.1-1 [1307 kB]
Get:185 http://172.17.4.1/private trixie-staging/main armhf r-cran-glue armhf 1.6.2-1 [152 kB]
Get:186 http://172.17.4.1/private trixie-staging/main armhf r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB]
Get:187 http://172.17.4.1/private trixie-staging/main armhf r-cran-vctrs armhf 0.6.4-1 [1336 kB]
Get:188 http://172.17.4.1/private trixie-staging/main armhf r-cran-blob all 1.2.4-1 [49.6 kB]
Get:189 http://172.17.4.1/private trixie-staging/main armhf r-cran-fastmap armhf 1.1.1-1 [67.1 kB]
Get:190 http://172.17.4.1/private trixie-staging/main armhf r-cran-cachem armhf 1.0.8-1 [71.8 kB]
Get:191 http://172.17.4.1/private trixie-staging/main armhf r-cran-memoise all 2.0.1-1 [53.8 kB]
Get:192 http://172.17.4.1/private trixie-staging/main armhf r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get:193 http://172.17.4.1/private trixie-staging/main armhf r-cran-plogr all 0.2.0-3 [14.9 kB]
Get:194 http://172.17.4.1/private trixie-staging/main armhf r-cran-cpp11 all 0.4.6-1 [219 kB]
Get:195 http://172.17.4.1/private trixie-staging/main armhf r-cran-rsqlite armhf 2.3.1-1 [995 kB]
Get:196 http://172.17.4.1/private trixie-staging/main armhf r-cran-curl armhf 5.1.0+dfsg-1 [172 kB]
Get:197 http://172.17.4.1/private trixie-staging/main armhf r-cran-jsonlite armhf 1.8.7+dfsg-1 [439 kB]
Get:198 http://172.17.4.1/private trixie-staging/main armhf r-cran-mime armhf 0.12-1 [35.6 kB]
Get:199 http://172.17.4.1/private trixie-staging/main armhf r-cran-sys armhf 3.4.2-1 [42.8 kB]
Get:200 http://172.17.4.1/private trixie-staging/main armhf r-cran-askpass armhf 1.2.0-1 [23.8 kB]
Get:201 http://172.17.4.1/private trixie-staging/main armhf r-cran-openssl armhf 2.1.1+dfsg-1 [394 kB]
Get:202 http://172.17.4.1/private trixie-staging/main armhf r-cran-r6 all 2.5.1-1 [105 kB]
Get:203 http://172.17.4.1/private trixie-staging/main armhf r-cran-httr all 1.4.7+dfsg-1 [459 kB]
Get:204 http://172.17.4.1/private trixie-staging/main armhf r-cran-png armhf 0.1-8-1 [40.2 kB]
Get:205 http://172.17.4.1/private trixie-staging/main armhf r-bioc-zlibbioc all 1.46.0+dfsg-1 [9336 B]
Get:206 http://172.17.4.1/private trixie-staging/main armhf r-bioc-xvector armhf 0.40.0-1 [617 kB]
Get:207 http://172.17.4.1/private trixie-staging/main armhf r-cran-bitops armhf 1.0-7-1 [30.1 kB]
Get:208 http://172.17.4.1/private trixie-staging/main armhf r-cran-rcurl armhf 1.98-1.12+dfsg-1 [787 kB]
Get:209 http://172.17.4.1/private trixie-staging/main armhf r-bioc-genomeinfodbdata all 1.2.10-1 [12.0 MB]
Get:210 http://172.17.4.1/private trixie-staging/main armhf r-bioc-genomeinfodb all 1.36.4+dfsg-1 [3842 kB]
Get:211 http://172.17.4.1/private trixie-staging/main armhf r-cran-crayon all 1.5.2-1 [165 kB]
Get:212 http://172.17.4.1/private trixie-staging/main armhf r-bioc-biostrings armhf 2.68.1-1 [13.8 MB]
Get:213 http://172.17.4.1/private trixie-staging/main armhf r-bioc-keggrest all 1.40.1+dfsg-1 [186 kB]
Get:214 http://172.17.4.1/private trixie-staging/main armhf r-bioc-annotationdbi all 1.62.2-1 [4715 kB]
Get:215 http://172.17.4.1/private trixie-staging/main armhf r-cran-xml armhf 3.99-0.14-2 [1740 kB]
Get:216 http://172.17.4.1/private trixie-staging/main armhf r-cran-xtable all 1:1.8-4-2 [689 kB]
Get:217 http://172.17.4.1/private trixie-staging/main armhf r-bioc-annotate all 1.78.0+dfsg-1 [1738 kB]
Get:218 http://172.17.4.1/private trixie-staging/main armhf r-bioc-biocio all 1.10.0+dfsg-1 [214 kB]
Get:219 http://172.17.4.1/private trixie-staging/main armhf r-cran-formatr all 1.14-1 [152 kB]
Get:220 http://172.17.4.1/private trixie-staging/main armhf r-cran-lambda.r all 1.2.4-2 [118 kB]
Get:221 http://172.17.4.1/private trixie-staging/main armhf r-cran-futile.options all 1.0.1-3 [20.0 kB]
Get:222 http://172.17.4.1/private trixie-staging/main armhf r-cran-futile.logger all 1.4.3-4 [98.4 kB]
Get:223 http://172.17.4.1/private trixie-staging/main armhf r-cran-snow all 1:0.4.4-2 [98.9 kB]
Get:224 http://172.17.4.1/private trixie-staging/main armhf r-cran-codetools all 0.2-19-1 [90.9 kB]
Get:225 http://172.17.4.1/private trixie-staging/main armhf r-cran-bh all 1.81.0-1 [5776 B]
Get:226 http://172.17.4.1/private trixie-staging/main armhf r-bioc-biocparallel armhf 1.34.2-1 [1337 kB]
Get:227 http://172.17.4.1/private trixie-staging/main armhf r-bioc-genomicranges armhf 1.52.1+dfsg-1 [1823 kB]
Get:228 http://172.17.4.1/private trixie-staging/main armhf r-bioc-rhtslib armhf 2.2.0+dfsg-1 [1188 kB]
Get:229 http://172.17.4.1/private trixie-staging/main armhf r-bioc-rsamtools armhf 2.16.0+dfsg-2 [3496 kB]
Get:230 http://172.17.4.1/private trixie-staging/main armhf r-cran-matrixstats armhf 1.0.0-1 [471 kB]
Get:231 http://172.17.4.1/private trixie-staging/main armhf r-bioc-matrixgenerics all 1.12.3-1 [411 kB]
Get:232 http://172.17.4.1/private trixie-staging/main armhf r-cran-lattice armhf 0.21-9-1 [1376 kB]
Get:233 http://172.17.4.1/private trixie-staging/main armhf r-cran-matrix armhf 1.6-1-1 [3777 kB]
Get:234 http://172.17.4.1/private trixie-staging/main armhf r-cran-abind all 1.4-5-2 [64.6 kB]
Get:235 http://172.17.4.1/private trixie-staging/main armhf r-bioc-s4arrays armhf 1.0.6+dfsg-1 [512 kB]
Get:236 http://172.17.4.1/private trixie-staging/main armhf r-bioc-delayedarray armhf 0.26.7+dfsg-1 [1751 kB]
Get:237 http://172.17.4.1/private trixie-staging/main armhf r-bioc-summarizedexperiment all 1.30.2+dfsg-1 [1144 kB]
Get:238 http://172.17.4.1/private trixie-staging/main armhf r-bioc-genomicalignments armhf 1.36.0-1 [2137 kB]
Get:239 http://172.17.4.1/private trixie-staging/main armhf r-cran-littler armhf 0.3.18-2 [86.0 kB]
Get:240 http://172.17.4.1/private trixie-staging/main armhf r-cran-rjson armhf 0.2.21-1 [137 kB]
Get:241 http://172.17.4.1/private trixie-staging/main armhf r-cran-yaml armhf 2.3.7-1 [92.3 kB]
Get:242 http://172.17.4.1/private trixie-staging/main armhf r-cran-restfulr armhf 0.0.15-1 [348 kB]
Get:243 http://172.17.4.1/private trixie-staging/main armhf r-bioc-rtracklayer armhf 1.60.1-1 [5053 kB]
Get:244 http://172.17.4.1/private trixie-staging/main armhf r-bioc-bsgenome all 1.68.0-1 [6985 kB]
Get:245 http://172.17.4.1/private trixie-staging/main armhf r-cran-clipr all 0.8.0-1 [53.0 kB]
Get:246 http://172.17.4.1/private trixie-staging/main armhf r-cran-hms all 1.1.3-1 [104 kB]
Get:247 http://172.17.4.1/private trixie-staging/main armhf r-cran-fansi armhf 1.0.4-1 [612 kB]
Get:248 http://172.17.4.1/private trixie-staging/main armhf r-cran-magrittr armhf 2.0.3-1 [200 kB]
Get:249 http://172.17.4.1/private trixie-staging/main armhf r-cran-utf8 armhf 1.2.3-1 [129 kB]
Get:250 http://172.17.4.1/private trixie-staging/main armhf r-cran-pillar all 1.9.0+dfsg-1 [463 kB]
Get:251 http://172.17.4.1/private trixie-staging/main armhf r-cran-tibble armhf 3.2.1+dfsg-2 [422 kB]
Get:252 http://172.17.4.1/private trixie-staging/main armhf r-cran-withr all 2.5.0-1 [236 kB]
Get:253 http://172.17.4.1/private trixie-staging/main armhf r-cran-tidyselect armhf 1.2.0+dfsg-1 [222 kB]
Get:254 http://172.17.4.1/private trixie-staging/main armhf r-cran-tzdb armhf 0.4.0-2 [484 kB]
Get:255 http://172.17.4.1/private trixie-staging/main armhf r-cran-prettyunits all 1.2.0-1 [162 kB]
Get:256 http://172.17.4.1/private trixie-staging/main armhf r-cran-progress all 1.2.2-2 [88.9 kB]
Get:257 http://172.17.4.1/private trixie-staging/main armhf r-cran-vroom armhf 1.6.4-1 [782 kB]
Get:258 http://172.17.4.1/private trixie-staging/main armhf r-cran-pkgkitten all 0.2.3-1 [26.7 kB]
Get:259 http://172.17.4.1/private trixie-staging/main armhf r-cran-rcpp armhf 1.0.11-1 [2043 kB]
Get:260 http://172.17.4.1/private trixie-staging/main armhf r-cran-readr armhf 2.1.4-1 [752 kB]
Get:261 http://172.17.4.1/private trixie-staging/main armhf r-cran-plyr armhf 1.8.9-1 [827 kB]
Get:262 http://172.17.4.1/private trixie-staging/main armhf r-cran-stringi armhf 1.7.12-1 [830 kB]
Get:263 http://172.17.4.1/private trixie-staging/main armhf r-cran-stringr all 1.5.0-1 [295 kB]
Get:264 http://172.17.4.1/private trixie-staging/main armhf r-cran-reshape2 armhf 1.4.4-2 [110 kB]
Get:265 http://172.17.4.1/private trixie-staging/main armhf r-cran-gtable all 0.3.4+dfsg-1 [221 kB]
Get:266 http://172.17.4.1/private trixie-staging/main armhf r-cran-isoband armhf 0.2.7-1 [1611 kB]
Get:267 http://172.17.4.1/private trixie-staging/main armhf r-cran-mass armhf 7.3-60-2 [1114 kB]
Get:268 http://172.17.4.1/private trixie-staging/main armhf r-cran-nlme armhf 3.1.163-1 [2274 kB]
Get:269 http://172.17.4.1/private trixie-staging/main armhf r-cran-mgcv armhf 1.9-0-1 [3196 kB]
Get:270 http://172.17.4.1/private trixie-staging/main armhf r-cran-farver armhf 2.1.1-1 [1390 kB]
Get:271 http://172.17.4.1/private trixie-staging/main armhf r-cran-labeling all 0.4.3-1 [62.4 kB]
Get:272 http://172.17.4.1/private trixie-staging/main armhf r-cran-colorspace armhf 2.1-0+dfsg-1 [1691 kB]
Get:273 http://172.17.4.1/private trixie-staging/main armhf r-cran-munsell all 0.5.0-2 [236 kB]
Get:274 http://172.17.4.1/private trixie-staging/main armhf r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB]
Get:275 http://172.17.4.1/private trixie-staging/main armhf r-cran-viridislite all 0.4.2-2 [1299 kB]
Get:276 http://172.17.4.1/private trixie-staging/main armhf r-cran-scales all 1.2.1-1 [614 kB]
Get:277 http://172.17.4.1/private trixie-staging/main armhf r-cran-ggplot2 all 3.4.4+dfsg-1 [3405 kB]
Get:278 http://172.17.4.1/private trixie-staging/main armhf r-cran-pracma all 2.4.2-1 [1699 kB]
Get:279 http://172.17.4.1/private trixie-staging/main armhf r-cran-powerlaw all 0.70.6-2 [3367 kB]
Get:280 http://172.17.4.1/private trixie-staging/main armhf r-bioc-go.db all 3.17.0-1 [12.2 MB]
Get:281 http://172.17.4.1/private trixie-staging/main armhf r-cran-r.methodss3 all 1.8.2-1 [84.5 kB]
Get:282 http://172.17.4.1/private trixie-staging/main armhf r-cran-r.oo all 1.25.0-1 [959 kB]
Get:283 http://172.17.4.1/private trixie-staging/main armhf r-cran-r.utils all 2.12.2-1 [1391 kB]
Get:284 http://172.17.4.1/private trixie-staging/main armhf r-bioc-cner armhf 1.36.0+dfsg-3 [8381 kB]
Get:285 http://172.17.4.1/private trixie-staging/main armhf r-bioc-dirichletmultinomial armhf 1.42.0-1 [612 kB]
Get:286 http://172.17.4.1/private trixie-staging/main armhf r-bioc-seqlogo all 1.66.0+dfsg-1 [164 kB]
Get:287 http://172.17.4.1/private trixie-staging/main armhf r-cran-catools armhf 1.18.2-1 [200 kB]
Get:288 http://172.17.4.1/private trixie-staging/main armhf r-cran-gtools armhf 3.9.4-1 [360 kB]
Get:289 http://172.17.4.1/private trixie-staging/main armhf r-cran-tfmpvalue armhf 0.0.9-1 [50.6 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Creating config file /etc/R/Renviron with new version
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Setting up r-cran-prettyunits (1.2.0-1) ...
Setting up r-cran-fansi (1.0.4-1) ...
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Setting up r-cran-snow (1:0.4.4-2) ...
Setting up r-cran-gtools (3.9.4-1) ...
Setting up r-cran-glue (1.6.2-1) ...
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Setting up r-cran-bitops (1.0-7-1) ...
Setting up r-cran-bit64 (4.0.5-1) ...
Setting up r-bioc-zlibbioc (1.46.0+dfsg-1) ...
Setting up r-cran-askpass (1.2.0-1) ...
Setting up r-cran-fastmap (1.1.1-1) ...
Setting up r-cran-png (0.1-8-1) ...
Setting up r-cran-r.methodss3 (1.8.2-1) ...
Setting up r-bioc-biobase (2.60.0-1) ...
Setting up r-cran-jsonlite (1.8.7+dfsg-1) ...
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Setting up r-cran-utf8 (1.2.3-1) ...
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Setting up r-cran-cpp11 (0.4.6-1) ...
Setting up r-cran-plyr (1.8.9-1) ...
Setting up r-cran-rcolorbrewer (1.1-3-1) ...
Setting up r-bioc-s4vectors (0.38.2+dfsg-1) ...
Setting up r-cran-isoband (0.2.7-1) ...
Setting up r-cran-futile.logger (1.4.3-4) ...
Setting up libnamespace-clean-perl (0.27-2) ...
Setting up r-cran-gtable (0.3.4+dfsg-1) ...
Setting up r-cran-matrix (1.6-1-1) ...
Setting up r-cran-mgcv (1.9-0-1) ...
Setting up r-cran-powerlaw (0.70.6-2) ...
Setting up r-cran-cachem (1.0.8-1) ...
Setting up r-cran-tfmpvalue (0.0.9-1) ...
Setting up r-cran-catools (1.18.2-1) ...
Setting up r-bioc-iranges (2.34.1-1) ...
Setting up r-cran-rjson (0.2.21-1) ...
Setting up r-cran-tzdb (0.4.0-2) ...
Setting up r-cran-rcurl (1.98-1.12+dfsg-1) ...
Setting up r-bioc-seqlogo (1.66.0+dfsg-1) ...
Setting up r-cran-restfulr (0.0.15-1) ...
Setting up r-cran-vctrs (0.6.4-1) ...
Setting up r-cran-pillar (1.9.0+dfsg-1) ...
Setting up r-cran-openssl (2.1.1+dfsg-1) ...
Setting up r-bioc-s4arrays (1.0.6+dfsg-1) ...
Setting up r-cran-stringr (1.5.0-1) ...
Setting up r-bioc-biocparallel (1.34.2-1) ...
Setting up libwww-curl-simple-perl (0.100191-3) ...
Setting up r-bioc-rhtslib (2.2.0+dfsg-1) ...
Setting up r-cran-munsell (0.5.0-2) ...
Setting up r-cran-tibble (3.2.1+dfsg-2) ...
Setting up r-bioc-dirichletmultinomial (1.42.0-1) ...
Setting up r-bioc-biocio (1.10.0+dfsg-1) ...
Setting up r-cran-r.oo (1.25.0-1) ...
Setting up r-cran-tidyselect (1.2.0+dfsg-1) ...
Setting up r-cran-reshape2 (1.4.4-2) ...
Setting up r-bioc-genomeinfodb (1.36.4+dfsg-1) ...
Setting up r-cran-httr (1.4.7+dfsg-1) ...
Setting up r-cran-hms (1.1.3-1) ...
Setting up r-cran-scales (1.2.1-1) ...
Setting up r-cran-memoise (2.0.1-1) ...
Setting up r-cran-blob (1.2.4-1) ...
Setting up r-bioc-xvector (0.40.0-1) ...
Setting up dh-r (20230912) ...
Setting up r-cran-rsqlite (2.3.1-1) ...
Setting up r-cran-progress (1.2.2-2) ...
Setting up r-bioc-delayedarray (0.26.7+dfsg-1) ...
Setting up r-cran-r.utils (2.12.2-1) ...
Setting up r-cran-vroom (1.6.4-1) ...
Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ...
Setting up r-bioc-genomicranges (1.52.1+dfsg-1) ...
Setting up r-bioc-biostrings (2.68.1-1) ...
Setting up r-cran-readr (2.1.4-1) ...
Setting up r-bioc-rsamtools (2.16.0+dfsg-2) ...
Setting up r-bioc-summarizedexperiment (1.30.2+dfsg-1) ...
Setting up r-bioc-keggrest (1.40.1+dfsg-1) ...
Setting up r-bioc-annotationdbi (1.62.2-1) ...
Setting up r-bioc-go.db (3.17.0-1) ...
Setting up r-bioc-annotate (1.78.0+dfsg-1) ...
Setting up r-bioc-genomicalignments (1.36.0-1) ...
Setting up r-bioc-rtracklayer (1.60.1-1) ...
Setting up r-bioc-cner (1.36.0+dfsg-3) ...
Setting up r-bioc-bsgenome (1.68.0-1) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.37-12+rpi2) ...
Processing triggers for ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep  1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.0+rpi1 g++-12_12.3.0-10+rpi1 gcc-12_12.3.0-10+rpi1 libc6-dev_2.37-12+rpi2 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++6_13.2.0-4+rpi1 linux-libc-dev_6.5.6-1+rpi1
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+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

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Format: 3.0 (quilt)
Source: r-bioc-tfbstools
Binary: r-bioc-tfbstools
Architecture: any
Version: 1.36.0+dfsg-2
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://bioconductor.org/packages/TFBSTools/
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
Testsuite: autopkgtest-pkg-r
Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase, r-bioc-biostrings, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-bsgenome, r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb, r-bioc-genomicranges, r-cran-gtools, r-bioc-iranges, r-cran-dbi, r-cran-rsqlite, r-bioc-rtracklayer, r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector
Package-List:
 r-bioc-tfbstools deb gnu-r optional arch=any
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gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./r-bioc-tfbstools_1.36.0+dfsg-2.dsc: no acceptable signature found
dpkg-source: info: extracting r-bioc-tfbstools in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-bioc-tfbstools_1.36.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-tfbstools_1.36.0+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying Fix_autopkgtest.patch

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 1.36.0+dfsg-2+b3

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-0f1caf38-4e51-4198-8d3b-8104162436ac
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package r-bioc-tfbstools
dpkg-buildpackage: info: source version 1.36.0+dfsg-2+b3
dpkg-buildpackage: info: source distribution trixie-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --buildsystem R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules binary-arch
dh binary-arch --buildsystem R
   dh_update_autotools_config -a -O--buildsystem=R
   dh_autoreconf -a -O--buildsystem=R
   dh_auto_configure -a -O--buildsystem=R
   dh_auto_build -a -O--buildsystem=R
   dh_auto_test -a -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=R
   dh_prep -a -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-tfbstools/ -a -O--buildsystem=R
I: R Package: TFBSTools Version: 1.36.0
I: Building using R version 4.3.1-4
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Tue, 24 Oct 2023 10:43:47 +0000
	mkdir -p /<<BUILDDIR>>/r-bioc-tfbstools-1.36.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library
	R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-tfbstools-1.36.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 24 Oct 2023 10:43:47 +0000'"
* installing *source* package ‘TFBSTools’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Raspbian 12.3.0-10+rpi1) 12.3.0’
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -I"/usr/share/R/include" -DNDEBUG       -fpic  -g -O2 -ffile-prefix-map=/build/r-base-zZwmPk/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -g1 -Wdate-time -D_FORTIFY_SOURCE=2  -c matrixAlignerDynamic.c -o matrixAlignerDynamic.o
gcc -I"/usr/share/R/include" -DNDEBUG       -fpic  -g -O2 -ffile-prefix-map=/build/r-base-zZwmPk/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -g1 -Wdate-time -D_FORTIFY_SOURCE=2  -c R_init_TFBSTools.c -o R_init_TFBSTools.o
gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o TFBSTools.so matrixAlignerDynamic.o R_init_TFBSTools.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-bioc-tfbstools/usr/lib/R/site-library/00LOCK-r-bioc-tfbstools-1.36.0+dfsg/00new/TFBSTools/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘seqLogo’ in package ‘TFBSTools’
Creating a generic function for ‘colSums’ from package ‘base’ in package ‘TFBSTools’
Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘TFBSTools’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TFBSTools)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 299.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 301.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 302.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 305.
W: Ignoring specified R dependency: R (>= 3.2.2)
I: Using r-bioc-biocstyle for Suggests:BiocStyle (>= 1.7.7)
W: Cannot find a debian package for Suggests:JASPAR2014 (>= 1.4.0)
I: Using r-cran-knitr for Suggests:knitr (>= 1.11)
I: Using r-cran-testthat for Suggests:testthat
W: Cannot find a debian package for Suggests:JASPAR2016 (>= 1.0.0)
W: Cannot find a debian package for Suggests:JASPAR2018 (>= 1.0.0)
I: Using r-cran-rmarkdown for Suggests:rmarkdown
I: Using r-bioc-biobase for Imports:Biobase (>= 2.28)
I: Using r-bioc-biostrings for Imports:Biostrings (>= 2.36.4)
I: Using r-bioc-biocgenerics for Imports:BiocGenerics (>= 0.14.0)
I: Using r-bioc-biocparallel for Imports:BiocParallel (>= 1.2.21)
I: Using r-bioc-bsgenome for Imports:BSgenome (>= 1.36.3)
I: Using r-cran-catools for Imports:caTools (>= 1.17.1)
I: Using r-bioc-cner for Imports:CNEr (>= 1.4.0)
I: Using r-bioc-dirichletmultinomial for Imports:DirichletMultinomial (>= 1.10.0)
I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb (>= 1.6.1)
I: Using r-bioc-genomicranges for Imports:GenomicRanges (>= 1.20.6)
I: Using r-cran-gtools for Imports:gtools (>= 3.5.0)
I: Using r-bioc-iranges for Imports:IRanges (>= 2.2.7)
I: Using r-cran-dbi for Imports:DBI (>= 0.6)
I: Using r-cran-rsqlite for Imports:RSQLite (>= 1.0.0)
I: Using r-bioc-rtracklayer for Imports:rtracklayer (>= 1.28.10)
I: Using r-bioc-seqlogo for Imports:seqLogo (>= 1.34.0)
I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.9.25)
I: Using r-cran-tfmpvalue for Imports:TFMPvalue (>= 0.0.5)
I: Using r-cran-xml for Imports:XML (>= 3.98-1.3)
I: Using r-bioc-xvector for Imports:XVector (>= 0.8.0)
I: BioConductor API version: r-api-bioc-3.16
I: Use r-bioc-tfbstools as Debian binary package for variables substitution
   dh_installdocs -a -O--buildsystem=R
   dh_installchangelogs -a -O--buildsystem=R
   dh_installsystemduser -a -O--buildsystem=R
   dh_perl -a -O--buildsystem=R
   dh_link -a -O--buildsystem=R
   dh_strip_nondeterminism -a -O--buildsystem=R
   dh_compress -a -O--buildsystem=R
   dh_fixperms -a -O--buildsystem=R
   dh_missing -a -O--buildsystem=R
   dh_dwz -a -O--buildsystem=R
   dh_strip -a -O--buildsystem=R
   dh_makeshlibs -a -O--buildsystem=R
   dh_shlibdeps -a -O--buildsystem=R
   dh_installdeb -a -O--buildsystem=R
   dh_gencontrol -a -O--buildsystem=R
   dh_md5sums -a -O--buildsystem=R
   dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-tfbstools-dbgsym' in '../r-bioc-tfbstools-dbgsym_1.36.0+dfsg-2+b3_armhf.deb'.
dpkg-deb: building package 'r-bioc-tfbstools' in '../r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian pi5 test autobuilder <root@raspbian.org> -O../r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-10-24T10:44:48Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.changes:
------------------------------------------------

Format: 1.8
Date: Tue, 24 Oct 2023 10:43:47 +0000
Source: r-bioc-tfbstools (1.36.0+dfsg-2)
Binary: r-bioc-tfbstools r-bioc-tfbstools-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 1.36.0+dfsg-2+b3
Distribution: trixie-staging
Urgency: low
Maintainer: Raspbian pi5 test autobuilder <root@raspbian.org>
Changed-By: Raspbian pi5 test autobuilder <root@raspbian.org>
Description:
 r-bioc-tfbstools - GNU R Transcription Factor Binding Site (TFBS) Analysis
Changes:
 r-bioc-tfbstools (1.36.0+dfsg-2+b3) trixie-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
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Checksums-Sha256:
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Files:
 4836945c3d1899c469230cb1e94cda19 4696 debug optional r-bioc-tfbstools-dbgsym_1.36.0+dfsg-2+b3_armhf.deb
 f4b4bc3eff890b803bb64adfb21c4cf0 13635 gnu-r optional r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.buildinfo
 f17fc55c428e650086d024b221cc08de 996704 gnu-r optional r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: r-bioc-tfbstools (1.36.0+dfsg-2)
Binary: r-bioc-tfbstools r-bioc-tfbstools-dbgsym
Architecture: armhf
Version: 1.36.0+dfsg-2+b3
Binary-Only-Changes:
 r-bioc-tfbstools (1.36.0+dfsg-2+b3) trixie-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
 .
  -- Raspbian pi5 test autobuilder <root@raspbian.org>  Tue, 24 Oct 2023 10:43:47 +0000
Checksums-Md5:
 4836945c3d1899c469230cb1e94cda19 4696 r-bioc-tfbstools-dbgsym_1.36.0+dfsg-2+b3_armhf.deb
 f17fc55c428e650086d024b221cc08de 996704 r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.deb
Checksums-Sha1:
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 09ddb11d2d51b8c63a9d4460443addb46d4a3bd9 996704 r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.deb
Checksums-Sha256:
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Tue, 24 Oct 2023 10:44:48 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 autoconf (= 2.71-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-13),
 autotools-dev (= 20220109.1),
 base-files (= 13+rpi1),
 base-passwd (= 3.6.1),
 bash (= 5.2.15-2),
 binutils (= 2.41-6+rpi1),
 binutils-arm-linux-gnueabihf (= 2.41-6+rpi1),
 binutils-common (= 2.41-6+rpi1),
 bsdextrautils (= 2.39.2-4),
 bsdutils (= 1:2.39.2-4),
 build-essential (= 12.9),
 bzip2 (= 1.0.8-5+b2),
 ca-certificates (= 20230311),
 coreutils (= 9.1-1),
 cpp (= 4:12.2.0-3+rpi1),
 cpp-12 (= 12.3.0-10+rpi1),
 dash (= 0.5.12-6),
 dctrl-tools (= 2.24-3),
 debconf (= 1.5.82),
 debhelper (= 13.11.7),
 debianutils (= 5.14),
 dh-autoreconf (= 20),
 dh-r (= 20230912),
 dh-strip-nondeterminism (= 1.13.1-1),
 diffutils (= 1:3.8-4),
 dpkg (= 1.22.0+rpi1),
 dpkg-dev (= 1.22.0+rpi1),
 dwz (= 0.15-1),
 file (= 1:5.45-2),
 findutils (= 4.9.0-5),
 fontconfig (= 2.14.2-6),
 fontconfig-config (= 2.14.2-6),
 fonts-dejavu-core (= 2.37-8),
 fonts-dejavu-mono (= 2.37-8),
 g++ (= 4:12.2.0-3+rpi1),
 g++-12 (= 12.3.0-10+rpi1),
 gcc (= 4:12.2.0-3+rpi1),
 gcc-12 (= 12.3.0-10+rpi1),
 gcc-12-base (= 12.3.0-10+rpi1),
 gcc-13-base (= 13.2.0-4+rpi1),
 gettext (= 0.21-13),
 gettext-base (= 0.21-13),
 gfortran (= 4:12.2.0-3+rpi1),
 gfortran-12 (= 12.3.0-10+rpi1),
 grep (= 3.11-3),
 groff-base (= 1.23.0-3),
 gzip (= 1.12-1),
 hostname (= 3.23+nmu1),
 icu-devtools (= 72.1-4),
 init-system-helpers (= 1.65.2),
 intltool-debian (= 0.35.0+20060710.6),
 libacl1 (= 2.3.1-3),
 libalgorithm-c3-perl (= 0.11-2),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 13.2.0-4+rpi1),
 libatomic1 (= 13.2.0-4+rpi1),
 libattr1 (= 1:2.5.1-4),
 libaudit-common (= 1:3.1.1-1),
 libaudit1 (= 1:3.1.1-1),
 libb-hooks-endofscope-perl (= 0.26-1),
 libb-hooks-op-check-perl (= 0.22-2+b1),
 libbinutils (= 2.41-6+rpi1),
 libblas-dev (= 3.11.0-2),
 libblas3 (= 3.11.0-2),
 libblkid1 (= 2.39.2-4),
 libboost1.81-dev (= 1.81.0-7),
 libbrotli1 (= 1.0.9-2+b3),
 libbsd0 (= 0.11.7-4),
 libbz2-1.0 (= 1.0.8-5+b2),
 libbz2-dev (= 1.0.8-5+b2),
 libc-bin (= 2.37-12+rpi2),
 libc-dev-bin (= 2.37-12+rpi2),
 libc6 (= 2.37-12+rpi2),
 libc6-dev (= 2.37-12+rpi2),
 libcairo2 (= 1.18.0-1),
 libcap-ng0 (= 0.8.3-1+b1),
 libcap2 (= 1:2.66-4),
 libcc1-0 (= 13.2.0-4+rpi1),
 libclass-c3-perl (= 0.35-2),
 libclass-load-perl (= 0.25-2),
 libclass-load-xs-perl (= 0.10-2+b1),
 libclone-perl (= 0.46-1),
 libcom-err2 (= 1.47.0-2),
 libcrypt-dev (= 1:4.4.36-2),
 libcrypt1 (= 1:4.4.36-2),
 libctf-nobfd0 (= 2.41-6+rpi1),
 libctf0 (= 2.41-6+rpi1),
 libcurl3-gnutls (= 8.4.0-2),
 libcurl4 (= 8.4.0-2),
 libdata-optlist-perl (= 0.114-1),
 libdatrie1 (= 0.2.13-2+b2),
 libdb5.3 (= 5.3.28+dfsg2-2),
 libdebconfclient0 (= 0.271),
 libdebhelper-perl (= 13.11.7),
 libdeflate0 (= 1.18-1),
 libdevel-callchecker-perl (= 0.008-2),
 libdevel-globaldestruction-perl (= 0.14-4),
 libdevel-overloadinfo-perl (= 0.007-1),
 libdevel-stacktrace-perl (= 2.0400-2),
 libdist-checkconflicts-perl (= 0.11-2),
 libdpkg-perl (= 1.22.0+rpi1),
 libdynaloader-functions-perl (= 0.003-3),
 libelf1 (= 0.188-2.1+rpi1),
 libencode-locale-perl (= 1.05-3),
 libeval-closure-perl (= 0.14-3),
 libexpat1 (= 2.5.0-2),
 libffi8 (= 3.4.4-1),
 libfile-stripnondeterminism-perl (= 1.13.1-1),
 libfile-which-perl (= 1.27-2),
 libfontconfig1 (= 2.14.2-6),
 libfreetype6 (= 2.13.2+dfsg-1),
 libfribidi0 (= 1.0.13-3),
 libgcc-12-dev (= 12.3.0-10+rpi1),
 libgcc-s1 (= 13.2.0-4+rpi1),
 libgcrypt20 (= 1.10.2-3),
 libgdbm-compat4 (= 1.23-3),
 libgdbm6 (= 1.23-3),
 libgfortran-12-dev (= 12.3.0-10+rpi1),
 libgfortran5 (= 13.2.0-4+rpi1),
 libglib2.0-0 (= 2.78.0-2+rpi1),
 libgmp10 (= 2:6.3.0+dfsg-2),
 libgnutls30 (= 3.8.1-4),
 libgomp1 (= 13.2.0-4+rpi1),
 libgpg-error0 (= 1.47-2),
 libgraphite2-3 (= 1.3.14-1),
 libgsl27 (= 2.7.1+dfsg-6),
 libgslcblas0 (= 2.7.1+dfsg-6),
 libgssapi-krb5-2 (= 1.20.1-4),
 libharfbuzz0b (= 8.0.1-1),
 libhogweed6 (= 3.9.1-2),
 libhttp-date-perl (= 6.05-2),
 libhttp-message-perl (= 6.44-2),
 libice6 (= 2:1.0.10-1),
 libicu-dev (= 72.1-4),
 libicu72 (= 72.1-4),
 libidn2-0 (= 2.3.4-1),
 libio-html-perl (= 1.004-3),
 libisl23 (= 0.26-3),
 libjansson4 (= 2.14-2),
 libjbig0 (= 2.1-6.1),
 libjpeg-dev (= 1:2.1.5-2),
 libjpeg62-turbo (= 1:2.1.5-2),
 libjpeg62-turbo-dev (= 1:2.1.5-2),
 libk5crypto3 (= 1.20.1-4),
 libkeyutils1 (= 1.6.3-2),
 libkrb5-3 (= 1.20.1-4),
 libkrb5support0 (= 1.20.1-4),
 liblapack-dev (= 3.11.0-2),
 liblapack3 (= 3.11.0-2),
 libldap-2.5-0 (= 2.5.13+dfsg-5+rpi1),
 liblerc4 (= 4.0.0+ds-3),
 liblwp-mediatypes-perl (= 6.04-2),
 liblz4-1 (= 1.9.4-1+rpi1+b1),
 liblzma-dev (= 5.4.4-0.1),
 liblzma5 (= 5.4.4-0.1),
 libmagic-mgc (= 1:5.45-2),
 libmagic1 (= 1:5.45-2),
 libmd0 (= 1.1.0-1),
 libmodule-implementation-perl (= 0.09-2),
 libmodule-runtime-conflicts-perl (= 0.003-2),
 libmodule-runtime-perl (= 0.016-2),
 libmoose-perl (= 2.2206-1),
 libmount1 (= 2.39.2-4),
 libmpc3 (= 1.3.1-1),
 libmpfr6 (= 4.2.1-1),
 libmro-compat-perl (= 0.15-2),
 libnamespace-clean-perl (= 0.27-2),
 libncurses-dev (= 6.4+20231016-1),
 libncurses6 (= 6.4+20231016-1),
 libncursesw6 (= 6.4+20231016-1),
 libnettle8 (= 3.9.1-2),
 libnghttp2-14 (= 1.57.0-1),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libp11-kit0 (= 0.25.0-5),
 libpackage-deprecationmanager-perl (= 0.18-1),
 libpackage-stash-perl (= 0.40-1),
 libpackage-stash-xs-perl (= 0.30-1+b1),
 libpam-modules (= 1.5.2-7),
 libpam-modules-bin (= 1.5.2-7),
 libpam-runtime (= 1.5.2-7),
 libpam0g (= 1.5.2-7),
 libpango-1.0-0 (= 1.51.0+ds-2),
 libpangocairo-1.0-0 (= 1.51.0+ds-2),
 libpangoft2-1.0-0 (= 1.51.0+ds-2),
 libpaper-utils (= 1.1.29),
 libpaper1 (= 1.1.29),
 libparams-classify-perl (= 0.015-2+b1),
 libparams-util-perl (= 1.102-2+b1),
 libpcre2-16-0 (= 10.42-4),
 libpcre2-32-0 (= 10.42-4),
 libpcre2-8-0 (= 10.42-4),
 libpcre2-dev (= 10.42-4),
 libpcre2-posix3 (= 10.42-4),
 libperl5.36 (= 5.36.0-9),
 libpipeline1 (= 1.5.7-1),
 libpixman-1-0 (= 0.42.2-1),
 libpkgconf3 (= 1.8.1-1),
 libpng-dev (= 1.6.40-2),
 libpng16-16 (= 1.6.40-2),
 libpsl5 (= 0.21.2-1+b1),
 libreadline-dev (= 8.2-1.3),
 libreadline8 (= 8.2-1.3),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
 libsasl2-2 (= 2.1.28+dfsg1-3),
 libsasl2-modules-db (= 2.1.28+dfsg1-3),
 libseccomp2 (= 2.5.4-1+rpi1+b1),
 libselinux1 (= 3.5-1),
 libsframe1 (= 2.41-6+rpi1),
 libsharpyuv0 (= 1.3.2-0.3),
 libsm6 (= 2:1.2.3-1),
 libsmartcols1 (= 2.39.2-4),
 libssh2-1 (= 1.11.0-2),
 libssl3 (= 3.0.11-1),
 libstdc++-12-dev (= 12.3.0-10+rpi1),
 libstdc++6 (= 13.2.0-4+rpi1),
 libsub-exporter-perl (= 0.990-1),
 libsub-exporter-progressive-perl (= 0.001013-3),
 libsub-identify-perl (= 0.14-3),
 libsub-install-perl (= 0.929-1),
 libsub-name-perl (= 0.27-1),
 libsub-override-perl (= 0.09-4),
 libswitch-perl (= 2.17-3),
 libsystemd0 (= 254.5-1+rpi1),
 libtasn1-6 (= 4.19.0-3),
 libtcl8.6 (= 8.6.13+dfsg-2),
 libthai-data (= 0.1.29-1),
 libthai0 (= 0.1.29-1),
 libtiff6 (= 4.5.1+git230720-1),
 libtimedate-perl (= 2.3300-2),
 libtinfo6 (= 6.4+20231016-1),
 libtirpc-common (= 1.3.3+ds-1),
 libtirpc-dev (= 1.3.3+ds-1),
 libtirpc3 (= 1.3.3+ds-1),
 libtk8.6 (= 8.6.13-2),
 libtool (= 2.4.7-7),
 libtry-tiny-perl (= 0.31-2),
 libubsan1 (= 13.2.0-4+rpi1),
 libuchardet0 (= 0.0.7-1),
 libudev1 (= 254.5-1+rpi1),
 libunistring5 (= 1.1-2),
 liburi-perl (= 5.21-1),
 libuuid1 (= 2.39.2-4),
 libvariable-magic-perl (= 0.63-1+b1),
 libwebp7 (= 1.3.2-0.3),
 libwww-curl-perl (= 4.17-10),
 libwww-curl-simple-perl (= 0.100191-3),
 libx11-6 (= 2:1.8.7-1),
 libx11-data (= 2:1.8.7-1),
 libxau6 (= 1:1.0.9-1),
 libxcb-render0 (= 1.15-1),
 libxcb-shm0 (= 1.15-1),
 libxcb1 (= 1.15-1),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.4-1),
 libxft2 (= 2.3.6-1),
 libxml2 (= 2.9.14+dfsg-1.3),
 libxmuu1 (= 2:1.1.3-3),
 libxrender1 (= 1:0.9.10-1.1),
 libxss1 (= 1:1.2.3-1),
 libxt6 (= 1:1.2.1-1.1),
 libzstd1 (= 1.5.5+dfsg2-1),
 linux-libc-dev (= 6.5.6-1+rpi1),
 login (= 1:4.13+dfsg1-3),
 lsb-base (= 11.6+rpi1),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1),
 man-db (= 2.11.2-3),
 mawk (= 1.3.4.20230808-1),
 ncurses-base (= 6.4+20231016-1),
 ncurses-bin (= 6.4+20231016-1),
 openssl (= 3.0.11-1),
 patch (= 2.7.6-7),
 perl (= 5.36.0-9),
 perl-base (= 5.36.0-9),
 perl-modules-5.36 (= 5.36.0-9),
 pkg-config (= 1.8.1-1),
 pkgconf (= 1.8.1-1),
 pkgconf-bin (= 1.8.1-1),
 po-debconf (= 1.0.21+nmu1),
 r-base-core (= 4.3.1-4),
 r-base-dev (= 4.3.1-4),
 r-bioc-annotate (= 1.78.0+dfsg-1),
 r-bioc-annotationdbi (= 1.62.2-1),
 r-bioc-biobase (= 2.60.0-1),
 r-bioc-biocgenerics (= 0.46.0-1),
 r-bioc-biocio (= 1.10.0+dfsg-1),
 r-bioc-biocparallel (= 1.34.2-1),
 r-bioc-biostrings (= 2.68.1-1),
 r-bioc-bsgenome (= 1.68.0-1),
 r-bioc-cner (= 1.36.0+dfsg-3),
 r-bioc-delayedarray (= 0.26.7+dfsg-1),
 r-bioc-dirichletmultinomial (= 1.42.0-1),
 r-bioc-genomeinfodb (= 1.36.4+dfsg-1),
 r-bioc-genomeinfodbdata (= 1.2.10-1),
 r-bioc-genomicalignments (= 1.36.0-1),
 r-bioc-genomicranges (= 1.52.1+dfsg-1),
 r-bioc-go.db (= 3.17.0-1),
 r-bioc-iranges (= 2.34.1-1),
 r-bioc-keggrest (= 1.40.1+dfsg-1),
 r-bioc-matrixgenerics (= 1.12.3-1),
 r-bioc-rhtslib (= 2.2.0+dfsg-1),
 r-bioc-rsamtools (= 2.16.0+dfsg-2),
 r-bioc-rtracklayer (= 1.60.1-1),
 r-bioc-s4arrays (= 1.0.6+dfsg-1),
 r-bioc-s4vectors (= 0.38.2+dfsg-1),
 r-bioc-seqlogo (= 1.66.0+dfsg-1),
 r-bioc-summarizedexperiment (= 1.30.2+dfsg-1),
 r-bioc-xvector (= 0.40.0-1),
 r-bioc-zlibbioc (= 1.46.0+dfsg-1),
 r-cran-abind (= 1.4-5-2),
 r-cran-askpass (= 1.2.0-1),
 r-cran-bh (= 1.81.0-1),
 r-cran-bit (= 4.0.5-1),
 r-cran-bit64 (= 4.0.5-1),
 r-cran-bitops (= 1.0-7-1),
 r-cran-blob (= 1.2.4-1),
 r-cran-cachem (= 1.0.8-1),
 r-cran-catools (= 1.18.2-1),
 r-cran-cli (= 3.6.1-1),
 r-cran-clipr (= 0.8.0-1),
 r-cran-codetools (= 0.2-19-1),
 r-cran-colorspace (= 2.1-0+dfsg-1),
 r-cran-cpp11 (= 0.4.6-1),
 r-cran-crayon (= 1.5.2-1),
 r-cran-curl (= 5.1.0+dfsg-1),
 r-cran-dbi (= 1.1.3-1),
 r-cran-fansi (= 1.0.4-1),
 r-cran-farver (= 2.1.1-1),
 r-cran-fastmap (= 1.1.1-1),
 r-cran-formatr (= 1.14-1),
 r-cran-futile.logger (= 1.4.3-4),
 r-cran-futile.options (= 1.0.1-3),
 r-cran-ggplot2 (= 3.4.4+dfsg-1),
 r-cran-glue (= 1.6.2-1),
 r-cran-gtable (= 0.3.4+dfsg-1),
 r-cran-gtools (= 3.9.4-1),
 r-cran-hms (= 1.1.3-1),
 r-cran-httr (= 1.4.7+dfsg-1),
 r-cran-isoband (= 0.2.7-1),
 r-cran-jsonlite (= 1.8.7+dfsg-1),
 r-cran-labeling (= 0.4.3-1),
 r-cran-lambda.r (= 1.2.4-2),
 r-cran-lattice (= 0.21-9-1),
 r-cran-lifecycle (= 1.0.3+dfsg-1),
 r-cran-littler (= 0.3.18-2),
 r-cran-magrittr (= 2.0.3-1),
 r-cran-mass (= 7.3-60-2),
 r-cran-matrix (= 1.6-1-1),
 r-cran-matrixstats (= 1.0.0-1),
 r-cran-memoise (= 2.0.1-1),
 r-cran-mgcv (= 1.9-0-1),
 r-cran-mime (= 0.12-1),
 r-cran-munsell (= 0.5.0-2),
 r-cran-nlme (= 3.1.163-1),
 r-cran-openssl (= 2.1.1+dfsg-1),
 r-cran-pillar (= 1.9.0+dfsg-1),
 r-cran-pkgconfig (= 2.0.3-2),
 r-cran-pkgkitten (= 0.2.3-1),
 r-cran-plogr (= 0.2.0-3),
 r-cran-plyr (= 1.8.9-1),
 r-cran-png (= 0.1-8-1),
 r-cran-powerlaw (= 0.70.6-2),
 r-cran-pracma (= 2.4.2-1),
 r-cran-prettyunits (= 1.2.0-1),
 r-cran-progress (= 1.2.2-2),
 r-cran-r.methodss3 (= 1.8.2-1),
 r-cran-r.oo (= 1.25.0-1),
 r-cran-r.utils (= 2.12.2-1),
 r-cran-r6 (= 2.5.1-1),
 r-cran-rcolorbrewer (= 1.1-3-1),
 r-cran-rcpp (= 1.0.11-1),
 r-cran-rcurl (= 1.98-1.12+dfsg-1),
 r-cran-readr (= 2.1.4-1),
 r-cran-reshape2 (= 1.4.4-2),
 r-cran-restfulr (= 0.0.15-1),
 r-cran-rjson (= 0.2.21-1),
 r-cran-rlang (= 1.1.1-1),
 r-cran-rsqlite (= 2.3.1-1),
 r-cran-scales (= 1.2.1-1),
 r-cran-snow (= 1:0.4.4-2),
 r-cran-stringi (= 1.7.12-1),
 r-cran-stringr (= 1.5.0-1),
 r-cran-sys (= 3.4.2-1),
 r-cran-tfmpvalue (= 0.0.9-1),
 r-cran-tibble (= 3.2.1+dfsg-2),
 r-cran-tidyselect (= 1.2.0+dfsg-1),
 r-cran-tzdb (= 0.4.0-2),
 r-cran-utf8 (= 1.2.3-1),
 r-cran-vctrs (= 0.6.4-1),
 r-cran-viridislite (= 0.4.2-2),
 r-cran-vroom (= 1.6.4-1),
 r-cran-withr (= 2.5.0-1),
 r-cran-xml (= 3.99-0.14-2),
 r-cran-xtable (= 1:1.8-4-2),
 r-cran-yaml (= 2.3.7-1),
 readline-common (= 8.2-1.3),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-1),
 sensible-utils (= 0.0.20),
 sysvinit-utils (= 3.08-3),
 tar (= 1.34+dfsg-1.2),
 tzdata (= 2023c-10),
 ucf (= 3.0043+nmu1),
 unzip (= 6.0-28),
 usr-is-merged (= 37),
 util-linux (= 2.39.2-4),
 x11-common (= 1:7.7+23),
 xauth (= 1:1.1.2-1),
 xdg-utils (= 1.1.3-4.1),
 xz-utils (= 5.4.4-0.1),
 zip (= 3.0-13),
 zlib1g (= 1:1.2.13.dfsg-3),
 zlib1g-dev (= 1:1.2.13.dfsg-3)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_GB.UTF-8"
 LC_ALL="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 SOURCE_DATE_EPOCH="1698144227"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


r-bioc-tfbstools-dbgsym_1.36.0+dfsg-2+b3_armhf.deb
--------------------------------------------------

 new Debian package, version 2.0.
 size 4696 bytes: control archive=548 bytes.
     433 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: r-bioc-tfbstools-dbgsym
 Source: r-bioc-tfbstools (1.36.0+dfsg-2)
 Version: 1.36.0+dfsg-2+b3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 17
 Depends: r-bioc-tfbstools (= 1.36.0+dfsg-2+b3)
 Section: debug
 Priority: optional
 Description: debug symbols for r-bioc-tfbstools
 Build-Ids: 0f041e3e91403a14b5fe732ecf13d869d06d239e

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lrwxrwxrwx root/root         0 2023-10-24 10:43 ./usr/share/doc/r-bioc-tfbstools-dbgsym -> r-bioc-tfbstools


r-bioc-tfbstools_1.36.0+dfsg-2+b3_armhf.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 996704 bytes: control archive=2340 bytes.
    1485 bytes,    18 lines      control
    3896 bytes,    46 lines      md5sums
 Package: r-bioc-tfbstools
 Source: r-bioc-tfbstools (1.36.0+dfsg-2)
 Version: 1.36.0+dfsg-2+b3
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 1823
 Depends: r-api-4.0, r-api-bioc-3.16, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
 Suggests: r-bioc-biocstyle (>= 1.7.7), r-cran-knitr (>= 1.11), r-cran-testthat, r-cran-rmarkdown
 Section: gnu-r
 Priority: optional
 Homepage: https://bioconductor.org/packages/TFBSTools/
 Description: GNU R Transcription Factor Binding Site (TFBS) Analysis
  TFBSTools is a package for the analysis and manipulation of
  transcription factor binding sites. It includes matrices conversion
  between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
  and Information Content Matrix (ICM). It can also scan putative TFBS
  from sequence/alignment, query JASPAR database and provides a wrapper of
  de novo motif discovery software.

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drwxr-xr-x root/root         0 2023-10-24 10:43 ./usr/share/doc/
drwxr-xr-x root/root         0 2023-10-24 10:43 ./usr/share/doc/r-bioc-tfbstools/
-rw-r--r-- root/root       226 2023-10-24 10:43 ./usr/share/doc/r-bioc-tfbstools/changelog.Debian.armhf.gz
-rw-r--r-- root/root      1036 2023-10-24 10:43 ./usr/share/doc/r-bioc-tfbstools/changelog.Debian.gz
-rw-r--r-- root/root       949 2022-11-29 07:47 ./usr/share/doc/r-bioc-tfbstools/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 3848
Build-Time: 60
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 204
Job: r-bioc-tfbstools_1.36.0+dfsg-2
Machine Architecture: arm64
Package: r-bioc-tfbstools
Package-Time: 272
Source-Version: 1.36.0+dfsg-2
Space: 3848
Status: successful
Version: 1.36.0+dfsg-2+b3
--------------------------------------------------------------------------------
Finished at 2023-10-24T10:44:48Z
Build needed 00:04:32, 3848k disk space
Raspbian Package Auto-Building

Build log for r-bioc-tfbstools (1.36.0+dfsg-2+b3) on armhf
