r-bioc-tfbstools →
1.28.0+dfsg-1 →
armhf → 2020-11-24 23:57:20
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| r-bioc-tfbstools 1.28.0+dfsg-1 (armhf) Tue, 24 Nov 2020 23:17:38 +0000 |
+==============================================================================+
Package: r-bioc-tfbstools
Version: 1.28.0+dfsg-1
Source Version: 1.28.0+dfsg-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-1c88b02f-0b03-4ffd-ac78-5323ea5c6e01' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-bioc-tfbstools' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 124 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.28.0+dfsg-1 (dsc) [2669 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.28.0+dfsg-1 (tar) [118 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.28.0+dfsg-1 (diff) [3556 B]
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I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-ZBOu5g/r-bioc-tfbstools-1.28.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-ZBOu5g' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-GhluiR/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-GhluiR/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-GhluiR/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ InRelease
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Get:3 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ Sources [349 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 18 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
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debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12784 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector (>= 0.8.0)
Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector (>= 0.8.0)
dpkg-deb: building package 'sbuild-build-depends-r-bioc-tfbstools-dummy' in '/<<BUILDDIR>>/resolver-GhluiR/apt_archive/sbuild-build-depends-r-bioc-tfbstools-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-tfbstools-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ Sources [709 B]
Get:5 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ Packages [794 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-bioc-tfbstools build dependencies (apt-based resolver)
----------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates dctrl-tools
debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-10 groff-base icu-devtools intltool-debian libalgorithm-c3-perl
libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl
libblas-dev libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0
libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
libclass-load-xs-perl libcroco3 libcurl3-gnutls libcurl4
libdata-optlist-perl libdatrie1 libdebhelper-perl libdevel-callchecker-perl
libdevel-globaldestruction-perl libdevel-overloadinfo-perl
libdevel-stacktrace-perl libdist-checkconflicts-perl
libdynaloader-functions-perl libelf1 libencode-locale-perl
libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0
libgfortran-10-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgsl25
libgslcblas0 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6
libicu-dev libicu67 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev liblapack-dev liblapack3 liblwp-mediatypes-perl
liblzma-dev libmagic-mgc libmagic1 libmodule-implementation-perl
libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl
libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl
libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
libparams-classify-perl libparams-util-perl libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libsub-exporter-perl
libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data
libthai0 libtiff5 libtimedate-perl libtk8.6 libtool libtry-tiny-perl
libuchardet0 liburi-perl libvariable-magic-perl libwebp6 libwww-curl-perl
libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 littler m4 man-db openssl pkg-config po-debconf r-base-core
r-base-dev r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase
r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biostrings r-bioc-bsgenome
r-bioc-cner r-bioc-delayedarray r-bioc-dirichletmultinomial
r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments
r-bioc-genomicranges r-bioc-go.db r-bioc-iranges r-bioc-keggrest
r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
r-bioc-s4vectors r-bioc-seqlogo r-bioc-summarizedexperiment r-bioc-xvector
r-bioc-zlibbioc r-cran-askpass r-cran-assertthat r-cran-backports r-cran-bh
r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-callr
r-cran-catools r-cran-cli r-cran-clipr r-cran-colorspace r-cran-cpp11
r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc r-cran-digest
r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-ggplot2 r-cran-glue
r-cran-gtable r-cran-gtools r-cran-hms r-cran-httr r-cran-isoband
r-cran-jsonlite r-cran-labeling r-cran-lambda.r r-cran-lattice
r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix
r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell
r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-png
r-cran-powerlaw r-cran-pracma r-cran-praise r-cran-prettyunits
r-cran-processx r-cran-ps r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils
r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-readr
r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rsqlite
r-cran-rstudioapi r-cran-scales r-cran-snow r-cran-stringi r-cran-stringr
r-cran-sys r-cran-testthat r-cran-tfmpvalue r-cran-tibble r-cran-utf8
r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xml r-cran-xtable ucf
unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc debtags dh-make gettext-doc
libasprintf-dev libgettextpo-dev gfortran-doc gfortran-10-doc
libcoarrays-dev groff liblapack-doc libboost-doc libboost1.71-doc
libboost-atomic1.71-dev libboost-chrono1.71-dev libboost-container1.71-dev
libboost-context1.71-dev libboost-contract1.71-dev
libboost-coroutine1.71-dev libboost-date-time1.71-dev
libboost-exception1.71-dev libboost-fiber1.71-dev
libboost-filesystem1.71-dev libboost-graph1.71-dev
libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev
libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev
libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev
libboost-program-options1.71-dev libboost-python1.71-dev
libboost-random1.71-dev libboost-regex1.71-dev
libboost-serialization1.71-dev libboost-stacktrace1.71-dev
libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev
libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev
libboost1.71-tools-dev libmpfrc++-dev libntl-dev gsl-ref-psdoc | gsl-doc-pdf
| gsl-doc-info | gsl-ref-html icu-doc liblzma-doc ncurses-doc
libscalar-number-perl readline-doc tcl8.6 tk8.6 libtool-doc gcj-jdk
libwww-perl libcurl4-gnutls-dev m4-doc apparmor less www-browser
libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
texlive-base texlive-latex-base texlive-plain-generic
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-bioc-genefilter
r-bioc-org.hs.eg.db r-cran-runit r-bioc-graph r-bioc-biocstyle r-cran-knitr
r-bioc-all r-bioc-affy r-bioc-deseq2 r-cran-foreach r-cran-bbmisc
r-bioc-variantannotation r-bioc-shortread r-cran-codetools r-cran-data.table
r-bioc-genomicfeatures r-cran-biocmanager r-bioc-gviz r-cran-rmarkdown
r-bioc-edger r-bioc-annotationhub r-bioc-dexseq r-bioc-delayedmatrixstats
r-bioc-limma r-bioc-hdf5array r-bioc-rhdf5 r-cran-covr r-cran-roxygen2
r-cran-rpart r-cran-htmlwidgets r-cran-prettycode r-cran-kernsmooth
r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs
r-cran-dplyr r-cran-jpeg r-cran-viridis r-cran-progress r-cran-rmysql
r-cran-unitizer r-cran-hmisc r-cran-maps r-cran-maptools r-cran-multcomp
r-cran-sf r-cran-svglite r-cran-forcats r-cran-lubridate r-cran-httpuv
r-cran-xml2 r-cran-magick r-cran-getopt r-cran-base64enc r-cran-doparallel
r-cran-iterators r-cran-itertools r-cran-quadprog r-cran-inline r-cran-mockr
r-cran-dichromat r-cran-rmpi r-cran-rsprng r-cran-rlecuyer r-cran-devtools
r-cran-usethis r-cran-formattable r-cran-htmltools r-cran-purrr r-cran-tidyr
r-cran-zeallot r-cran-plm r-cran-zoo r-cran-survival
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libclass-c3-xs-perl
libdevel-lexalias-perl libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libclone-perl libdevel-partialdump-perl libgpm2 libpng-tools
publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
r-cran-runit r-cran-batchjobs r-cran-doparallel r-cran-batchtools
r-cran-rmpi r-bioc-biovizbase r-bioc-genefilter r-bioc-shortread
r-cran-cliapp r-cran-mockery r-cran-decor r-cran-knitr r-cran-brio
r-cran-httpuv r-cran-webutils r-cran-testit r-cran-codetools r-cran-survival
r-cran-sp r-cran-mapproj r-cran-hexbin r-cran-vdiffr r-cran-quantreg
r-cran-sodium r-cran-lubridate r-cran-domc r-cran-abind r-cran-rmarkdown
r-cran-dbitest r-cran-htmltools r-cran-htmlwidgets r-cran-xml2
r-cran-data.table r-cran-dplyr r-cran-mockr r-cran-generics r-cran-waldo
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates dctrl-tools
debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-10 groff-base icu-devtools intltool-debian libalgorithm-c3-perl
libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl
libblas-dev libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0
libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
libclass-load-xs-perl libcroco3 libcurl3-gnutls libcurl4
libdata-optlist-perl libdatrie1 libdebhelper-perl libdevel-callchecker-perl
libdevel-globaldestruction-perl libdevel-overloadinfo-perl
libdevel-stacktrace-perl libdist-checkconflicts-perl
libdynaloader-functions-perl libelf1 libencode-locale-perl
libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0
libgfortran-10-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgsl25
libgslcblas0 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6
libicu-dev libicu67 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev liblapack-dev liblapack3 liblwp-mediatypes-perl
liblzma-dev libmagic-mgc libmagic1 libmodule-implementation-perl
libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl
libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl
libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
libparams-classify-perl libparams-util-perl libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libsub-exporter-perl
libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data
libthai0 libtiff5 libtimedate-perl libtk8.6 libtool libtry-tiny-perl
libuchardet0 liburi-perl libvariable-magic-perl libwebp6 libwww-curl-perl
libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 littler m4 man-db openssl pkg-config po-debconf r-base-core
r-base-dev r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase
r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biostrings r-bioc-bsgenome
r-bioc-cner r-bioc-delayedarray r-bioc-dirichletmultinomial
r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments
r-bioc-genomicranges r-bioc-go.db r-bioc-iranges r-bioc-keggrest
r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
r-bioc-s4vectors r-bioc-seqlogo r-bioc-summarizedexperiment r-bioc-xvector
r-bioc-zlibbioc r-cran-askpass r-cran-assertthat r-cran-backports r-cran-bh
r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-callr
r-cran-catools r-cran-cli r-cran-clipr r-cran-colorspace r-cran-cpp11
r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc r-cran-digest
r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-ggplot2 r-cran-glue
r-cran-gtable r-cran-gtools r-cran-hms r-cran-httr r-cran-isoband
r-cran-jsonlite r-cran-labeling r-cran-lambda.r r-cran-lattice
r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix
r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell
r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-png
r-cran-powerlaw r-cran-pracma r-cran-praise r-cran-prettyunits
r-cran-processx r-cran-ps r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils
r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-readr
r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rsqlite
r-cran-rstudioapi r-cran-scales r-cran-snow r-cran-stringi r-cran-stringr
r-cran-sys r-cran-testthat r-cran-tfmpvalue r-cran-tibble r-cran-utf8
r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xml r-cran-xtable
sbuild-build-depends-r-bioc-tfbstools-dummy ucf unzip x11-common xauth
xdg-utils zip zlib1g-dev
0 upgraded, 286 newly installed, 0 to remove and 18 not upgraded.
Need to get 288 MB of archives.
After this operation, 874 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-GhluiR/apt_archive ./ sbuild-build-depends-r-bioc-tfbstools-dummy 0.invalid.0 [1072 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1h-1 [812 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2.1 [188 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-1 [1176 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.2 [578 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2 [259 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.2+dfsg-4 [345 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.12-1 [311 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.12-1 [700 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.41.0-3 [63.0 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.72.0-1 [300 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-16+rpi1 [232 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.7-1 [1366 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b5 [36.5 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.46.2-3 [172 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [55.7 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.7 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+21 [252 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.2.0-1 [159 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.3-1 [24.7 MB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-10-dev armhf 10.2.0-16+rpi1 [278 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf gfortran-10 armhf 10.2.0-16+rpi1 [56.1 MB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:10.2.0-1+rpi1 [1428 B]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-3 [113 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-3 [2980 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20200918-1 [79.5 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2+20200918-1 [290 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2+20200918-1 [940 B]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.1~rc2-2 [121 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:2.0.5-1.1 [241 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:2.0.5-1.1 [66.0 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-13 [235 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-13 [228 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-13 [150 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-13 [566 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-3 [277 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-4 [172 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-4 [9248 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.3-1 [4484 B]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libencode-locale-perl all 1.05-1 [13.7 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libtimedate-perl all 2.3300-1 [39.2 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libhttp-date-perl all 6.05-1 [10.4 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libio-html-perl all 1.001-1 [17.6 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf liburi-perl all 5.05-1 [90.3 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libhttp-message-perl all 6.26-1 [79.4 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libparams-util-perl armhf 1.102-1+b1 [24.6 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libsub-install-perl all 0.928-1 [11.4 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libdata-optlist-perl all 0.110-1 [10.6 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libb-hooks-op-check-perl armhf 0.22-1+b4 [11.0 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libdynaloader-functions-perl all 0.003-1 [12.6 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libdevel-callchecker-perl armhf 0.008-1+b2 [15.7 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libparams-classify-perl armhf 0.015-1+b3 [24.6 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libmodule-implementation-perl all 0.09-1 [12.9 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libpackage-stash-perl all 0.38-1 [21.7 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libclass-load-perl all 0.25-1 [16.1 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libclass-load-xs-perl armhf 0.10-1+b4 [14.3 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libsub-exporter-progressive-perl all 0.001013-1 [7588 B]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libdevel-globaldestruction-perl all 0.14-1 [8084 B]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libalgorithm-c3-perl all 0.11-1 [11.7 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libclass-c3-perl all 0.35-1 [22.9 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libmro-compat-perl all 0.13-1 [12.2 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libsub-identify-perl armhf 0.14-1+b3 [11.6 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libdevel-overloadinfo-perl all 0.005-1 [7212 B]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libdevel-stacktrace-perl all 2.0400-1 [28.6 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libsub-exporter-perl all 0.987-1 [47.2 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libeval-closure-perl all 0.14-1 [11.5 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libdist-checkconflicts-perl all 0.11-1 [10.8 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libmodule-runtime-conflicts-perl all 0.003-1 [6882 B]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libsub-name-perl armhf 0.26-1+b1 [13.2 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libpackage-deprecationmanager-perl all 0.17-1 [16.4 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libpackage-stash-xs-perl armhf 0.29-1+b2 [18.5 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libmoose-perl armhf 2.2013-1+b1 [806 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libvariable-magic-perl armhf 0.62-1+b3 [43.0 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libb-hooks-endofscope-perl all 0.24-1 [18.6 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libnamespace-clean-perl all 0.27-1 [17.3 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.72.0-1 [297 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libwww-curl-perl armhf 4.17-7+b1 [58.9 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libwww-curl-simple-perl all 0.100191-2 [12.5 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20201117 [40.8 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf libboost1.71-dev armhf 1.71.0-7+b1 [9098 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.71.0.3+b5 [4624 B]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.6+dfsg-2 [79.5 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf libgsl25 armhf 2.6+dfsg-2 [753 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.12-1 [92.4 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.12-1 [15.6 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocgenerics all 0.36.0-1 [648 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biobase armhf 2.50.0-1 [2228 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-s4vectors armhf 0.28.0-1 [2019 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-iranges armhf 2.24.0-1 [2204 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf r-cran-dbi all 1.1.0-3 [599 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit armhf 4.0.4+dfsg-1 [418 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit64 armhf 4.0.5-1 [463 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rlang armhf 0.4.8-1 [1131 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ellipsis armhf 0.3.1-1 [31.5 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf r-cran-digest armhf 0.6.27-1 [186 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf r-cran-glue armhf 1.4.2-1 [139 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vctrs armhf 0.3.5-1 [1077 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf r-cran-blob all 1.2.1-2 [49.1 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf r-cran-memoise all 1.1.0-3 [39.2 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.2.0-1 [25.3 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.5-1 [2009 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bh all 1.66.0-1 [5072 B]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plogr all 0.2.0-3 [14.9 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rsqlite armhf 2.2.1-1 [911 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotationdbi all 1.52.0-1 [4707 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xml armhf 3.99-0.5-1 [1717 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xtable all 1:1.8-4-2 [689 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf r-cran-curl armhf 4.3+dfsg-1+b1 [150 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf r-cran-jsonlite armhf 1.7.1+dfsg-1 [442 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mime armhf 0.9-1+b1 [35.4 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf r-cran-sys armhf 3.4-1 [42.7 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf r-cran-askpass armhf 1.1-2 [22.3 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf r-cran-openssl armhf 1.4.3+dfsg-1 [374 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r6 all 2.5.0-1 [104 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf r-cran-httr all 1.4.2-1 [478 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotate all 1.68.0+dfsg-1 [2103 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf r-cran-formatr all 1.7-2 [151 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lambda.r all 1.2.4-2 [118 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.options all 1.0.1-3 [20.0 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.logger all 1.4.3-4 [98.4 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf r-cran-snow all 1:0.4.3-2 [109 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocparallel armhf 1.24.1-1 [1136 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-zlibbioc all 1.36.0+dfsg-1 [8824 B]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-xvector armhf 0.30.0-1 [611 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-5 [750 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biostrings armhf 2.58.0-1 [14.2 MB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bitops armhf 1.0-6-5 [23.6 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcurl armhf 1.98-1.2-1+b1 [788 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodbdata all 1.2.4-1 [10.7 MB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodb all 1.26.0-1 [3912 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicranges armhf 1.42.0+dfsg-1 [1864 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rhtslib armhf 1.22.0+dfsg-1 [948 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rsamtools armhf 2.6.0-1 [3572 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrixstats armhf 0.57.0-1 [574 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-matrixgenerics all 1.2.0-2 [285 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lattice armhf 0.20-41-1+b1 [1167 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrix armhf 1.2-18-1+b1 [3451 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-delayedarray armhf 0.16.0+dfsg-1 [1802 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-summarizedexperiment all 1.20.0+dfsg-1 [1955 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicalignments armhf 1.26.0-1 [2214 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rtracklayer armhf 1.50.0-1 [7406 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-bsgenome all 1.58.0-1 [7206 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf r-cran-assertthat all 0.2.1-2 [56.5 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fansi armhf 0.4.1-1+b1 [337 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cli all 2.1.0-1 [410 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf r-cran-clipr all 0.7.1-1 [50.7 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf r-cran-hms all 0.5.3-2 [108 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lifecycle all 0.2.0-2 [93.2 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf r-cran-magrittr all 1.5-6 [154 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf r-cran-utf8 armhf 1.1.4-2 [128 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pillar all 1.4.6-1 [227 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tibble armhf 3.0.4-1 [429 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cpp11 all 0.2.4-1 [124 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf r-cran-readr armhf 1.4.0-1 [721 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plyr armhf 1.8.6-2 [830 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringi armhf 1.5.3-1 [706 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringr all 1.4.0-2 [199 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf r-cran-reshape2 armhf 1.4.4-2 [110 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtable all 0.3.0+dfsg-2 [163 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf r-cran-evaluate all 0.14-2 [81.1 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf r-cran-backports armhf 1.2.0-1 [89.8 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rprojroot all 1.3-2-3 [97.5 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf r-cran-desc all 1.2.0-3 [301 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ps armhf 1.4.0-1 [252 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf r-cran-processx armhf 3.4.4-1 [292 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf r-cran-callr all 3.5.1-1 [386 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf r-cran-prettyunits all 1.1.1-2 [39.1 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf r-cran-withr all 2.3.0-1 [209 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgbuild all 1.1.0-1 [144 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rstudioapi all 0.13-1 [262 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgload armhf 1.1.0-1 [170 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf r-cran-praise all 1.0.0-4 [20.1 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf r-cran-testthat armhf 2.3.2-2 [1038 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf r-cran-isoband armhf 0.2.2-1 [2437 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mass armhf 7.3-53-1 [1114 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf r-cran-nlme armhf 3.1.150-1 [2216 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mgcv armhf 1.8-33-1 [2958 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf r-cran-farver armhf 2.0.3-1+b1 [1381 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf r-cran-labeling all 0.4.2-1 [62.7 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf r-cran-colorspace armhf 2.0-0+dfsg-1 [1677 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf r-cran-munsell all 0.5.0-2 [236 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf r-cran-viridislite all 0.3.0-4 [59.2 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf r-cran-scales all 1.1.1-1 [557 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ggplot2 all 3.3.2+dfsg-2 [3146 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pracma all 2.2.9-2 [1692 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf r-cran-powerlaw all 0.70.6-2 [3367 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-go.db all 3.12.1-1 [12.9 MB]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.methodss3 all 1.8.1-1 [83.1 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.oo all 1.24.0-1 [955 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.utils all 2.10.1-1 [1385 kB]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf r-cran-png armhf 0.1-7-4 [39.9 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-keggrest all 1.30.0+dfsg-1 [173 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-cner armhf 1.26.0+dfsg-1 [8380 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-dirichletmultinomial armhf 1.32.0-1 [643 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-seqlogo all 1.56.0-1 [505 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf r-cran-catools armhf 1.18.0-1+b1 [202 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtools armhf 3.8.2-1+b1 [330 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tfmpvalue armhf 0.0.8-2 [50.2 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up r-bioc-biostrings (2.58.0-1) ...
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Setting up r-cran-testthat (2.3.2-2) ...
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Setting up r-bioc-go.db (3.12.1-1) ...
Setting up r-bioc-annotate (1.68.0+dfsg-1) ...
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Setting up r-bioc-genomicalignments (1.26.0-1) ...
Setting up r-bioc-rtracklayer (1.50.0-1) ...
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Setting up dh-r (20201117) ...
Setting up sbuild-build-depends-r-bioc-tfbstools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-4+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-16+rpi1 gcc-10_10.2.0-16+rpi1 libc6-dev_2.31-4+rpi1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.11 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-2+rpi1 binutils-arm-linux-gnueabihf_2.35.1-2+rpi1 binutils-common_2.35.1-2+rpi1 bsdextrautils_2.36-3 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-16+rpi1 dash_0.5.11+git20200708+dd9ef66-2 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-r_20201117 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3 file_1:5.38-5 findutils_4.7.0+git20201010-2 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-16+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-16+rpi1 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libxml2_2.9.10+dfsg-6.2 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.2.0-1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 littler_0.3.12-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 netbase_6.2 openssl_1.1.1h-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.3-1 r-base-dev_4.0.3-1 r-bioc-annotate_1.68.0+dfsg-1 r-bioc-annotationdbi_1.52.0-1 r-bioc-biobase_2.50.0-1 r-bioc-biocgenerics_0.36.0-1 r-bioc-biocparallel_1.24.1-1 r-bioc-biostrings_2.58.0-1 r-bioc-bsgenome_1.58.0-1 r-bioc-cner_1.26.0+dfsg-1 r-bioc-delayedarray_0.16.0+dfsg-1 r-bioc-dirichletmultinomial_1.32.0-1 r-bioc-genomeinfodb_1.26.0-1 r-bioc-genomeinfodbdata_1.2.4-1 r-bioc-genomicalignments_1.26.0-1 r-bioc-genomicranges_1.42.0+dfsg-1 r-bioc-go.db_3.12.1-1 r-bioc-iranges_2.24.0-1 r-bioc-keggrest_1.30.0+dfsg-1 r-bioc-matrixgenerics_1.2.0-2 r-bioc-rhtslib_1.22.0+dfsg-1 r-bioc-rsamtools_2.6.0-1 r-bioc-rtracklayer_1.50.0-1 r-bioc-s4vectors_0.28.0-1 r-bioc-seqlogo_1.56.0-1 r-bioc-summarizedexperiment_1.20.0+dfsg-1 r-bioc-xvector_0.30.0-1 r-bioc-zlibbioc_1.36.0+dfsg-1 r-cran-askpass_1.1-2 r-cran-assertthat_0.2.1-2 r-cran-backports_1.2.0-1 r-cran-bh_1.66.0-1 r-cran-bit_4.0.4+dfsg-1 r-cran-bit64_4.0.5-1 r-cran-bitops_1.0-6-5 r-cran-blob_1.2.1-2 r-cran-callr_3.5.1-1 r-cran-catools_1.18.0-1+b1 r-cran-cli_2.1.0-1 r-cran-clipr_0.7.1-1 r-cran-colorspace_2.0-0+dfsg-1 r-cran-cpp11_0.2.4-1 r-cran-crayon_1.3.4-5 r-cran-curl_4.3+dfsg-1+b1 r-cran-dbi_1.1.0-3 r-cran-desc_1.2.0-3 r-cran-digest_0.6.27-1 r-cran-ellipsis_0.3.1-1 r-cran-evaluate_0.14-2 r-cran-fansi_0.4.1-1+b1 r-cran-farver_2.0.3-1+b1 r-cran-formatr_1.7-2 r-cran-futile.logger_1.4.3-4 r-cran-futile.options_1.0.1-3 r-cran-ggplot2_3.3.2+dfsg-2 r-cran-glue_1.4.2-1 r-cran-gtable_0.3.0+dfsg-2 r-cran-gtools_3.8.2-1+b1 r-cran-hms_0.5.3-2 r-cran-httr_1.4.2-1 r-cran-isoband_0.2.2-1 r-cran-jsonlite_1.7.1+dfsg-1 r-cran-labeling_0.4.2-1 r-cran-lambda.r_1.2.4-2 r-cran-lattice_0.20-41-1+b1 r-cran-lifecycle_0.2.0-2 r-cran-littler_0.3.12-1 r-cran-magrittr_1.5-6 r-cran-mass_7.3-53-1 r-cran-matrix_1.2-18-1+b1 r-cran-matrixstats_0.57.0-1 r-cran-memoise_1.1.0-3 r-cran-mgcv_1.8-33-1 r-cran-mime_0.9-1+b1 r-cran-munsell_0.5.0-2 r-cran-nlme_3.1.150-1 r-cran-openssl_1.4.3+dfsg-1 r-cran-pillar_1.4.6-1 r-cran-pkgbuild_1.1.0-1 r-cran-pkgconfig_2.0.3-2 r-cran-pkgkitten_0.2.0-1 r-cran-pkgload_1.1.0-1 r-cran-plogr_0.2.0-3 r-cran-plyr_1.8.6-2 r-cran-png_0.1-7-4 r-cran-powerlaw_0.70.6-2 r-cran-pracma_2.2.9-2 r-cran-praise_1.0.0-4 r-cran-prettyunits_1.1.1-2 r-cran-processx_3.4.4-1 r-cran-ps_1.4.0-1 r-cran-r.methodss3_1.8.1-1 r-cran-r.oo_1.24.0-1 r-cran-r.utils_2.10.1-1 r-cran-r6_2.5.0-1 r-cran-rcolorbrewer_1.1-2-3 r-cran-rcpp_1.0.5-1 r-cran-rcurl_1.98-1.2-1+b1 r-cran-readr_1.4.0-1 r-cran-reshape2_1.4.4-2 r-cran-rlang_0.4.8-1 r-cran-rprojroot_1.3-2-3 r-cran-rsqlite_2.2.1-1 r-cran-rstudioapi_0.13-1 r-cran-scales_1.1.1-1 r-cran-snow_1:0.4.3-2 r-cran-stringi_1.5.3-1 r-cran-stringr_1.4.0-2 r-cran-sys_3.4-1 r-cran-testthat_2.3.2-2 r-cran-tfmpvalue_0.0.8-2 r-cran-tibble_3.0.4-1 r-cran-utf8_1.1.4-2 r-cran-vctrs_0.3.5-1 r-cran-viridislite_0.3.0-4 r-cran-withr_2.3.0-1 r-cran-xml_3.99-0.5-1 r-cran-xtable_1:1.8-4-2 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc2-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-tfbstools-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 ucf_3.0043 unzip_6.0-25 util-linux_2.36-3 x11-common_1:7.7+21 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.rupUh5pX/trustedkeys.kbx': General error
gpgv: Signature made Tue Nov 3 15:04:54 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-tfbstools_1.28.0+dfsg-1.dsc
dpkg-source: info: extracting r-bioc-tfbstools in /<<BUILDDIR>>/r-bioc-tfbstools-1.28.0+dfsg
dpkg-source: info: unpacking r-bioc-tfbstools_1.28.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-tfbstools_1.28.0+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying Fix_autopkgtest.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-1c88b02f-0b03-4ffd-ac78-5323ea5c6e01
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-bioc-tfbstools
dpkg-buildpackage: info: source version 1.28.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules binary-arch
dh binary-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: testthat
I: R Package: TFBSTools Version: 1.28.0
I: Building using R version 4.0.3-1
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Tue, 03 Nov 2020 15:47:55 +0100
mkdir -p /<<BUILDDIR>>/r-bioc-tfbstools-1.28.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library
R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-tfbstools-1.28.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 03 Nov 2020 15:47:55 +0100'"
* installing *source* package 'TFBSTools' ...
** using staged installation
** libs
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.28.0+dfsg/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-sMz9ls/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c matrixAlignerDynamic.c -o matrixAlignerDynamic.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-sMz9ls/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c R_init_TFBSTools.c -o R_init_TFBSTools.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o TFBSTools.so matrixAlignerDynamic.o R_init_TFBSTools.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.28.0+dfsg/src'
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.28.0+dfsg/src'
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.28.0+dfsg/src'
installing to /<<BUILDDIR>>/r-bioc-tfbstools-1.28.0+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library/00LOCK-r-bioc-tfbstools-1.28.0+dfsg/00new/TFBSTools/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'seqLogo' in package 'TFBSTools'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TFBSTools)
W: Ignoring specified R dependency: R (>= 3.2.2)
I: Using r-cran-testthat for Recommends:testthat
W: Cannot find a debian package for Suggests:BiocStyle (>= 1.7.7)
W: Cannot find a debian package for Suggests:JASPAR2014 (>= 1.4.0)
I: Using r-cran-knitr for Suggests:knitr (>= 1.11)
W: Cannot find a debian package for Suggests:JASPAR2016 (>= 1.0.0)
W: Cannot find a debian package for Suggests:JASPAR2018 (>= 1.0.0)
I: Using r-bioc-biobase for Imports:Biobase (>= 2.28)
I: Using r-bioc-biostrings for Imports:Biostrings (>= 2.36.4)
I: Using r-bioc-biocgenerics for Imports:BiocGenerics (>= 0.14.0)
I: Using r-bioc-biocparallel for Imports:BiocParallel (>= 1.2.21)
I: Using r-bioc-bsgenome for Imports:BSgenome (>= 1.36.3)
I: Using r-cran-catools for Imports:caTools (>= 1.17.1)
I: Using r-bioc-cner for Imports:CNEr (>= 1.4.0)
I: Using r-bioc-dirichletmultinomial for Imports:DirichletMultinomial (>= 1.10.0)
I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb (>= 1.6.1)
I: Using r-bioc-genomicranges for Imports:GenomicRanges (>= 1.20.6)
I: Using r-cran-gtools for Imports:gtools (>= 3.5.0)
I: Using r-bioc-iranges for Imports:IRanges (>= 2.2.7)
I: Using r-cran-dbi for Imports:DBI (>= 0.6)
I: Using r-cran-rsqlite for Imports:RSQLite (>= 1.0.0)
I: Using r-bioc-rtracklayer for Imports:rtracklayer (>= 1.28.10)
I: Using r-bioc-seqlogo for Imports:seqLogo (>= 1.34.0)
I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.9.25)
I: Using r-cran-tfmpvalue for Imports:TFMPvalue (>= 0.0.5)
I: Using r-cran-xml for Imports:XML (>= 3.98-1.3)
I: Using r-bioc-xvector for Imports:XVector (>= 0.8.0)
I: BioConductor API version: r-api-bioc-3.12
I: Use r-bioc-tfbstools as Debian binary package for variables substitution
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_dwz -a -a -O--buildsystem=R
dh_strip -a -a -O--buildsystem=R
dh_makeshlibs -a -a -O--buildsystem=R
dh_shlibdeps -a -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-tfbstools-dbgsym' in '../r-bioc-tfbstools-dbgsym_1.28.0+dfsg-1_armhf.deb'.
dpkg-deb: building package 'r-bioc-tfbstools' in '../r-bioc-tfbstools_1.28.0+dfsg-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-bioc-tfbstools_1.28.0+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-11-24T23:57:07Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-bioc-tfbstools_1.28.0+dfsg-1_armhf.changes:
---------------------------------------------
Format: 1.8
Date: Tue, 03 Nov 2020 15:47:55 +0100
Source: r-bioc-tfbstools
Binary: r-bioc-tfbstools r-bioc-tfbstools-dbgsym
Architecture: armhf
Version: 1.28.0+dfsg-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
r-bioc-tfbstools - GNU R Transcription Factor Binding Site (TFBS) Analysis
Changes:
r-bioc-tfbstools (1.28.0+dfsg-1) unstable; urgency=medium
.
* New upstream version
* debhelper-compat 13 (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
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r-bioc-tfbstools-dbgsym_1.28.0+dfsg-1_armhf.deb
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r-bioc-tfbstools_1.28.0+dfsg-1_armhf.deb
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Package: r-bioc-tfbstools
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Architecture: armhf
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Installed-Size: 1948
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
Recommends: r-cran-testthat
Suggests: r-cran-knitr (>= 1.11)
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/TFBSTools/
Description: GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
and Information Content Matrix (ICM). It can also scan putative TFBS
from sequence/alignment, query JASPAR database and provides a wrapper of
de novo motif discovery software.
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+------------------------------------------------------------------------------+
| Post Build |
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+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 4096
Build-Time: 507
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1812
Job: r-bioc-tfbstools_1.28.0+dfsg-1
Machine Architecture: armhf
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Status: successful
Version: 1.28.0+dfsg-1
--------------------------------------------------------------------------------
Finished at 2020-11-24T23:57:07Z
Build needed 00:39:29, 4096k disc space