r-bioc-tfbstools →
1.26.0+dfsg-1 →
armhf → 2020-05-31 13:23:57
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| r-bioc-tfbstools 1.26.0+dfsg-1 (armhf) Sun, 31 May 2020 12:43:18 +0000 |
+==============================================================================+
Package: r-bioc-tfbstools
Version: 1.26.0+dfsg-1
Source Version: 1.26.0+dfsg-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-d8e15a5e-52a6-49ec-9fe5-4171db01fc43' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
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+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-bioc-tfbstools' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 124 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.26.0+dfsg-1 (dsc) [2644 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.26.0+dfsg-1 (tar) [118 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.26.0+dfsg-1 (diff) [3428 B]
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I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-QEPM8l/r-bioc-tfbstools-1.26.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-QEPM8l' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-FmHugt/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-FmHugt/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-FmHugt/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-FmHugt/apt_archive ./ InRelease
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Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded.
Need to get 848 B of archives.
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debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12274 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector (>= 0.8.0)
Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector (>= 0.8.0)
dpkg-deb: building package 'sbuild-build-depends-r-bioc-tfbstools-dummy' in '/<<BUILDDIR>>/resolver-FmHugt/apt_archive/sbuild-build-depends-r-bioc-tfbstools-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-tfbstools-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-FmHugt/apt_archive ./ InRelease
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Reading package lists...
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Reading package lists...
Install r-bioc-tfbstools build dependencies (apt-based resolver)
----------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cpp-9
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core g++-9 gcc-10-base gcc-9
gcc-9-base gettext gettext-base gfortran gfortran-9 groff-base icu-devtools
intltool-debian libarchive-zip-perl libasan5 libatomic1 libblas-dev libblas3
libboost-dev libboost1.67-dev libbrotli1 libbsd0 libbz2-dev libcairo2
libcc1-0 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgcc-9-dev libgcc-s1 libgfortran-9-dev
libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgsl25 libgslcblas0
libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu63 libjbig0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc
libmagic1 libncurses-dev libncurses5-dev libncurses6 libnghttp2-14
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev librtmp1
libsigsegv2 libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libstdc++6
libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
libtinfo5 libtk8.6 libtool libubsan1 libuchardet0 libwebp6 libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db
openssl pkg-config po-debconf r-base-core r-base-dev r-bioc-annotate
r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biocparallel
r-bioc-biostrings r-bioc-bsgenome r-bioc-cner r-bioc-delayedarray
r-bioc-dirichletmultinomial r-bioc-genomeinfodb r-bioc-genomeinfodbdata
r-bioc-genomicalignments r-bioc-genomicranges r-bioc-go.db r-bioc-iranges
r-bioc-keggrest r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
r-bioc-s4vectors r-bioc-seqlogo r-bioc-summarizedexperiment r-bioc-xvector
r-bioc-zlibbioc r-cran-askpass r-cran-assertthat r-cran-backports r-cran-bh
r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-callr
r-cran-catools r-cran-cli r-cran-clipr r-cran-colorspace r-cran-crayon
r-cran-curl r-cran-dbi r-cran-desc r-cran-digest r-cran-ellipsis
r-cran-evaluate r-cran-fansi r-cran-farver r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-ggplot2 r-cran-glue
r-cran-gtable r-cran-gtools r-cran-hms r-cran-httr r-cran-isoband
r-cran-jsonlite r-cran-labeling r-cran-lambda.r r-cran-lattice
r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix
r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell
r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-png
r-cran-powerlaw r-cran-pracma r-cran-praise r-cran-prettyunits
r-cran-processx r-cran-ps r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils
r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-readr
r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rsqlite
r-cran-rstudioapi r-cran-scales r-cran-snow r-cran-stringi r-cran-stringr
r-cran-sys r-cran-testthat r-cran-tfmpvalue r-cran-tibble r-cran-utf8
r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xml r-cran-xtable
sensible-utils ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-9-locales debtags dh-make gcc-9-doc gettext-doc libasprintf-dev
libgettextpo-dev gfortran-doc gfortran-9-doc libcoarrays-dev groff
liblapack-doc libboost-doc libboost1.67-doc libboost-atomic1.67-dev
libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev
libboost-contract1.67-dev libboost-coroutine1.67-dev
libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
libboost-filesystem1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
libboost-program-options1.67-dev libboost-python1.67-dev
libboost-random1.67-dev libboost-regex1.67-dev
libboost-serialization1.67-dev libboost-signals1.67-dev
libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev
libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user
icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-9-doc tcl8.6 tk8.6
libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl
elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base
texlive-latex-base texlive-plain-generic texlive-fonts-recommended
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo r-bioc-genefilter r-bioc-org.hs.eg.db
r-cran-runit r-bioc-graph r-cran-knitr r-bioc-all r-bioc-affy r-bioc-deseq2
r-cran-foreach r-cran-bbmisc r-bioc-variantannotation r-bioc-shortread
r-cran-codetools r-cran-data.table r-bioc-genomicfeatures r-cran-biocmanager
r-bioc-gviz r-cran-rmarkdown r-bioc-edger r-bioc-annotationhub r-bioc-limma
r-bioc-rhdf5 r-cran-covr r-cran-rpart r-cran-htmlwidgets r-cran-prettycode
r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny
r-cran-shinyjs r-cran-dplyr r-cran-jpeg r-cran-viridis r-cran-rmysql
r-cran-unitizer r-cran-hmisc r-cran-maps r-cran-maptools r-cran-multcomp
r-cran-quantreg r-cran-sf r-cran-svglite r-cran-forcats r-cran-lubridate
r-cran-httpuv r-cran-xml2 r-cran-magick r-cran-getopt r-cran-base64enc
r-cran-doparallel r-cran-iterators r-cran-itertools r-cran-quadprog
r-cran-inline r-cran-mockr r-cran-dichromat r-cran-rmpi r-cran-rsprng
r-cran-rlecuyer r-cran-devtools r-cran-usethis r-cran-htmltools r-cran-purrr
r-cran-tidyr r-cran-zeallot r-cran-plm r-cran-zoo r-cran-survival
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
r-cran-runit r-cran-batchjobs r-cran-doparallel r-cran-batchtools
r-cran-rmpi r-bioc-biovizbase r-bioc-genefilter r-bioc-shortread
r-cran-cliapp r-cran-mockery r-cran-httpuv r-cran-webutils r-cran-testit
r-cran-codetools r-cran-survival r-cran-sp r-cran-mapproj r-cran-hexbin
r-cran-vdiffr r-cran-sodium r-cran-lubridate r-cran-domc r-cran-abind
r-cran-rmarkdown r-cran-dbitest r-cran-htmltools r-cran-htmlwidgets
r-cran-xml2 r-cran-data.table r-cran-knitr r-cran-dplyr r-cran-mockr
r-cran-generics libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
x11-utils x11-xserver-utils
The following packages will be REMOVED:
libgcc1*
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libboost-dev libboost1.67-dev libbrotli1 libbsd0
libbz2-dev libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1
libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
libgraphite2-3 libgsl25 libgslcblas0 libgssapi-krb5-2 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
libtinfo5 libtk8.6 libtool libuchardet0 libwebp6 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db openssl
pkg-config po-debconf r-base-core r-base-dev r-bioc-annotate
r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biocparallel
r-bioc-biostrings r-bioc-bsgenome r-bioc-cner r-bioc-delayedarray
r-bioc-dirichletmultinomial r-bioc-genomeinfodb r-bioc-genomeinfodbdata
r-bioc-genomicalignments r-bioc-genomicranges r-bioc-go.db r-bioc-iranges
r-bioc-keggrest r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
r-bioc-s4vectors r-bioc-seqlogo r-bioc-summarizedexperiment r-bioc-xvector
r-bioc-zlibbioc r-cran-askpass r-cran-assertthat r-cran-backports r-cran-bh
r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-callr
r-cran-catools r-cran-cli r-cran-clipr r-cran-colorspace r-cran-crayon
r-cran-curl r-cran-dbi r-cran-desc r-cran-digest r-cran-ellipsis
r-cran-evaluate r-cran-fansi r-cran-farver r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-ggplot2 r-cran-glue
r-cran-gtable r-cran-gtools r-cran-hms r-cran-httr r-cran-isoband
r-cran-jsonlite r-cran-labeling r-cran-lambda.r r-cran-lattice
r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix
r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell
r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-png
r-cran-powerlaw r-cran-pracma r-cran-praise r-cran-prettyunits
r-cran-processx r-cran-ps r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils
r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-readr
r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rsqlite
r-cran-rstudioapi r-cran-scales r-cran-snow r-cran-stringi r-cran-stringr
r-cran-sys r-cran-testthat r-cran-tfmpvalue r-cran-tibble r-cran-utf8
r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xml r-cran-xtable
sbuild-build-depends-r-bioc-tfbstools-dummy sensible-utils ucf unzip
x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
cpp-9 g++-9 gcc-10-base gcc-9 gcc-9-base libasan5 libatomic1 libcc1-0
libgcc-9-dev libgcc-s1 libgomp1 libstdc++-9-dev libstdc++6 libubsan1
14 upgraded, 251 newly installed, 1 to remove and 16 not upgraded.
Need to get 262 MB of archives.
After this operation, 674 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-FmHugt/apt_archive ./ sbuild-build-depends-r-bioc-tfbstools-dummy 0.invalid.0 [1072 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.1.0-2+rpi1 [8172 B]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.1.0-2+rpi1 [115 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.1.0-2+rpi1 [82.9 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.1.0-2+rpi1 [197 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.1.0-2+rpi1 [36.1 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.1.0-2+rpi1 [31.7 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.1.0-2+rpi1 [408 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf g++-9 armhf 9.3.0-13+rpi1 [8225 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf gcc-9 armhf 9.3.0-13+rpi1 [7731 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf cpp-9 armhf 9.3.0-13+rpi1 [7464 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libasan5 armhf 9.3.0-13+rpi1 [348 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-9-dev armhf 9.3.0-13+rpi1 [1713 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libgcc-9-dev armhf 9.3.0-13+rpi1 [639 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf gcc-9-base armhf 9.3.0-13+rpi1 [197 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0042 [73.9 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1g-1 [1272 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.1 [187 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.8.1-1 [14.9 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.2-1 [1158 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5 [592 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.1 [1012 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6.1 [255 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7+rpi1 [61.5 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7+rpi1 [112 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7+rpi1 [318 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7+rpi1 [135 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-2+rpi1 [232 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b2 [36.4 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.44.7-4 [165 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.44.7-4 [52.6 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.44.7-4 [44.9 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.0-3 [24.6 MB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.3.0-13+rpi1 [278 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.3.0-13+rpi1 [8108 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-2 [113 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-2 [2981 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2-1 [932 B]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-4 [116 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-2 [276 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-3 [163 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.0-3 [4480 B]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20200314 [39.1 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-18 [8389 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2+b12 [4464 B]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.6+dfsg-2 [79.5 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libgsl25 armhf 2.6+dfsg-2 [753 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.9-1+b1 [308 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.9-1 [14.6 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocgenerics all 0.34.0-1 [639 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biobase armhf 2.48.0-1 [2232 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-s4vectors armhf 0.26.1-1 [2007 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-iranges armhf 2.22.2-1 [2280 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf r-cran-dbi all 1.1.0-3 [599 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit armhf 1.1-15.2-1+b1 [221 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit64 armhf 0.9-7-3+b1 [437 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rlang armhf 0.4.6-1+b1 [1117 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ellipsis armhf 0.3.1-1 [31.5 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf r-cran-digest armhf 0.6.25-1+b1 [177 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf r-cran-glue armhf 1.4.1-1 [138 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vctrs armhf 0.3.0-2 [957 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf r-cran-blob all 1.2.1-2 [49.1 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf r-cran-memoise all 1.1.0-3 [39.2 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.1.5-2 [23.7 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.4.6-1+b1 [1907 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bh all 1.66.0-1 [5072 B]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plogr all 0.2.0-3 [14.9 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rsqlite armhf 2.2.0-1+b1 [851 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotationdbi all 1.50.0-1 [4704 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xml armhf 3.99-0.3-2+b1 [1717 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xtable all 1:1.8-4-2 [689 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bitops armhf 1.0-6-4+b1 [23.8 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcurl armhf 1.98-1.2-1+b1 [788 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotate all 1.66.0+dfsg-1 [2104 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf r-cran-formatr all 1.7-2 [151 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lambda.r all 1.2.4-2 [118 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.options all 1.0.1-3 [20.0 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.logger all 1.4.3-4 [98.4 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf r-cran-snow all 1:0.4.3-2 [109 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocparallel armhf 1.22.0-1 [1115 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-zlibbioc all 1.34.0+dfsg-1 [8788 B]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-xvector armhf 0.28.0-1 [616 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-5 [750 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biostrings armhf 2.56.0-1 [14.2 MB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodbdata all 1.2.3-1 [10.4 MB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodb all 1.24.0-1 [3902 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicranges armhf 1.40.0+dfsg-1 [1873 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rhtslib armhf 1.20.0+dfsg-1 [965 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rsamtools armhf 2.4.0-1 [3697 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrixstats armhf 0.56.0-1+b1 [582 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lattice armhf 0.20-41-1+b1 [1167 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrix armhf 1.2-18-1+b1 [3451 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-delayedarray armhf 0.14.0+dfsg-2 [1743 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-summarizedexperiment all 1.18.1+dfsg-1 [1967 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicalignments armhf 1.24.0-1 [2223 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rtracklayer armhf 1.48.0-1 [4983 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-bsgenome all 1.56.0-1 [7192 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf r-cran-assertthat all 0.2.1-2 [56.5 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fansi armhf 0.4.1-1+b1 [337 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cli all 2.0.2-2 [392 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lifecycle all 0.2.0-2 [93.2 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf r-cran-magrittr all 1.5-6 [154 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf r-cran-utf8 armhf 1.1.4-1+b2 [127 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pillar all 1.4.4-2 [230 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tibble armhf 3.0.1-1+b1 [425 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf r-cran-hms all 0.5.3-2 [108 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r6 all 2.4.1-2 [79.2 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf r-cran-clipr all 0.7.0-2 [49.6 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf r-cran-readr armhf 1.3.1-1+b1 [679 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plyr armhf 1.8.6-2 [830 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringi armhf 1.4.6-1+b1 [686 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringr all 1.4.0-2 [199 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf r-cran-reshape2 armhf 1.4.4-2 [110 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtable all 0.3.0+dfsg-2 [163 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf r-cran-evaluate all 0.14-2 [81.1 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf r-cran-backports armhf 1.1.7-1 [72.6 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rprojroot all 1.3-2-3 [97.5 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf r-cran-desc all 1.2.0-3 [301 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ps armhf 1.3.3-1+b1 [215 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf r-cran-processx armhf 3.4.2-1+b1 [265 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf r-cran-callr all 3.4.3-2 [388 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf r-cran-prettyunits all 1.1.1-2 [39.1 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf r-cran-withr all 2.2.0-2 [209 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgbuild all 1.0.8-2 [140 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rstudioapi all 0.11-2 [249 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgload armhf 1.0.2-2 [163 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf r-cran-praise all 1.0.0-4 [20.1 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf r-cran-testthat armhf 2.3.2-2 [1038 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf r-cran-isoband armhf 0.2.1-1+b1 [2457 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mass armhf 7.3-51.6-1+b1 [1114 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf r-cran-nlme armhf 3.1.147-1+b1 [2221 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mgcv armhf 1.8-31-1+b1 [2731 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf r-cran-farver armhf 2.0.3-1+b1 [1381 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf r-cran-labeling all 0.3-4 [62.2 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf r-cran-colorspace armhf 1.4-1+dfsg-1+b1 [1636 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf r-cran-munsell all 0.5.0-2 [236 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf r-cran-viridislite all 0.3.0-4 [59.2 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf r-cran-scales all 1.1.1-1 [557 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ggplot2 all 3.3.0+dfsg-2 [3085 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pracma all 2.2.9-2 [1692 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf r-cran-powerlaw all 0.70.6-2 [3367 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-go.db all 3.11.1-1 [13.6 MB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.methodss3 all 1.8.0-2 [81.4 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.oo all 1.23.0-2 [948 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.utils all 2.9.2-2 [1372 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf r-cran-curl armhf 4.3+dfsg-1+b1 [150 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf r-cran-jsonlite armhf 1.6.1+dfsg-1+b1 [437 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mime armhf 0.9-1+b1 [35.4 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf r-cran-sys armhf 3.3-1+b1 [42.8 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf r-cran-askpass armhf 1.1-1+b1 [22.2 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf r-cran-openssl armhf 1.4.1+dfsg-2+b1 [368 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf r-cran-httr all 1.4.1-2 [477 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf r-cran-png armhf 0.1-7-3+b1 [40.1 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-keggrest all 1.28.0+dfsg-1 [173 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-cner armhf 1.24.0+dfsg-1 [8381 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-dirichletmultinomial armhf 1.30.0-1 [651 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-seqlogo all 1.54.3-1 [397 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf r-cran-catools armhf 1.18.0-1+b1 [202 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtools armhf 3.8.2-1+b1 [330 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tfmpvalue armhf 0.0.8-1+b1 [52.8 kB]
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Setting up libgfortran5:armhf (10.1.0-2+rpi1) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up libubsan1:armhf (10.1.0-2+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libkrb5-3:armhf (1.17-7+rpi1) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up openssl (1.1.1g-1) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-3) ...
Setting up libxml2:armhf (2.9.10+dfsg-5) ...
Setting up xdg-utils (1.1.3-2) ...
Setting up libcc1-0:armhf (10.1.0-2+rpi1) ...
Setting up libblas-dev:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up dctrl-tools (2.24-3) ...
Setting up gcc-9-base:armhf (9.3.0-13+rpi1) ...
Setting up libbz2-dev:armhf (1.0.8-2) ...
Setting up libfile-stripnondeterminism-perl (1.8.1-1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-14) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libpng-dev:armhf (1.6.37-2) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libreadline-dev:armhf (8.0-4) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libasan5:armhf (9.3.0-13+rpi1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0042) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.8.1-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up libncurses5-dev:armhf (6.2-1) ...
Setting up cpp-9 (9.3.0-13+rpi1) ...
Setting up libcurl4:armhf (7.68.0-1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up automake (1:1.16.2-1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up gettext (0.19.8.1-10) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libgcc-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up gcc-9 (9.3.0-13+rpi1) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libstdc++-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libpango-1.0-0:armhf (1.44.7-4) ...
Setting up libgfortran-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up g++-9 (9.3.0-13+rpi1) ...
Setting up libpangoft2-1.0-0:armhf (1.44.7-4) ...
Setting up libpangocairo-1.0-0:armhf (1.44.7-4) ...
Setting up libboost1.67-dev:armhf (1.67.0-18) ...
Setting up gfortran-9 (9.3.0-13+rpi1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up r-base-core (4.0.0-3) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.3.4-5) ...
Setting up r-cran-gtable (0.3.0+dfsg-2) ...
Setting up r-cran-labeling (0.3-4) ...
Setting up r-cran-futile.options (1.0.1-3) ...
Setting up r-cran-lattice (0.20-41-1+b1) ...
Setting up r-cran-ps (1.3.3-1+b1) ...
Setting up r-cran-nlme (3.1.147-1+b1) ...
Setting up r-cran-farver (2.0.3-1+b1) ...
Setting up r-cran-formatr (1.7-2) ...
Setting up r-cran-xml (3.99-0.3-2+b1) ...
Setting up r-cran-viridislite (0.3.0-4) ...
Setting up libboost-dev:armhf (1.67.0.2+b12) ...
Setting up r-cran-clipr (0.7.0-2) ...
Setting up r-cran-r6 (2.4.1-2) ...
Setting up r-cran-pkgkitten (0.1.5-2) ...
Setting up r-cran-magrittr (1.5-6) ...
Setting up r-bioc-genomeinfodbdata (1.2.3-1) ...
Setting up r-cran-littler (0.3.9-1+b1) ...
Setting up r-cran-bh (1.66.0-1) ...
Setting up r-cran-rcpp (1.0.4.6-1+b1) ...
Setting up r-cran-curl (4.3+dfsg-1+b1) ...
Setting up r-bioc-biocgenerics (0.34.0-1) ...
Setting up r-cran-rlang (0.4.6-1+b1) ...
Setting up r-cran-matrixstats (0.56.0-1+b1) ...
Setting up r-base-dev (4.0.0-3) ...
Setting up r-cran-assertthat (0.2.1-2) ...
Setting up littler (0.3.9-1) ...
Setting up r-cran-pracma (2.2.9-2) ...
Setting up r-cran-sys (3.3-1+b1) ...
Setting up r-cran-plogr (0.2.0-3) ...
Setting up r-cran-withr (2.2.0-2) ...
Setting up r-cran-backports (1.1.7-1) ...
Setting up r-cran-processx (3.4.2-1+b1) ...
Setting up r-cran-mime (0.9-1+b1) ...
Setting up r-cran-praise (1.0.0-4) ...
Setting up r-cran-digest (0.6.25-1+b1) ...
Setting up r-cran-lambda.r (1.2.4-2) ...
Setting up r-cran-evaluate (0.14-2) ...
Setting up r-cran-dbi (1.1.0-3) ...
Setting up r-cran-prettyunits (1.1.1-2) ...
Setting up r-cran-fansi (0.4.1-1+b1) ...
Setting up r-cran-mass (7.3-51.6-1+b1) ...
Setting up r-cran-snow (1:0.4.3-2) ...
Setting up r-cran-gtools (3.8.2-1+b1) ...
Setting up r-cran-glue (1.4.1-1) ...
Setting up r-cran-bit (1.1-15.2-1+b1) ...
Setting up r-cran-xtable (1:1.8-4-2) ...
Setting up r-cran-cli (2.0.2-2) ...
Setting up r-cran-lifecycle (0.2.0-2) ...
Setting up r-cran-bitops (1.0-6-4+b1) ...
Setting up r-cran-rprojroot (1.3-2-3) ...
Setting up r-cran-bit64 (0.9-7-3+b1) ...
Setting up r-bioc-zlibbioc (1.34.0+dfsg-1) ...
Setting up r-cran-askpass (1.1-1+b1) ...
Setting up r-cran-png (0.1-7-3+b1) ...
Setting up r-cran-r.methodss3 (1.8.0-2) ...
Setting up r-bioc-biobase (2.48.0-1) ...
Setting up r-cran-jsonlite (1.6.1+dfsg-1+b1) ...
Setting up r-cran-rstudioapi (0.11-2) ...
Setting up r-cran-pkgconfig (2.0.3-2) ...
Setting up r-cran-utf8 (1.1.4-1+b2) ...
Setting up r-cran-colorspace (1.4-1+dfsg-1+b1) ...
Setting up r-cran-stringi (1.4.6-1+b1) ...
Setting up r-cran-plyr (1.8.6-2) ...
Setting up r-cran-rcolorbrewer (1.1-2-3) ...
Setting up r-bioc-s4vectors (0.26.1-1) ...
Setting up r-cran-futile.logger (1.4.3-4) ...
Setting up r-cran-memoise (1.1.0-3) ...
Setting up r-cran-matrix (1.2-18-1+b1) ...
Setting up r-cran-mgcv (1.8-31-1+b1) ...
Setting up r-cran-powerlaw (0.70.6-2) ...
Setting up r-cran-tfmpvalue (0.0.8-1+b1) ...
Setting up r-cran-catools (1.18.0-1+b1) ...
Setting up r-bioc-iranges (2.22.2-1) ...
Setting up r-cran-rcurl (1.98-1.2-1+b1) ...
Setting up r-bioc-seqlogo (1.54.3-1) ...
Setting up r-bioc-delayedarray (0.14.0+dfsg-2) ...
Setting up r-cran-ellipsis (0.3.1-1) ...
Setting up r-cran-openssl (1.4.1+dfsg-2+b1) ...
Setting up r-cran-stringr (1.4.0-2) ...
Setting up r-bioc-biocparallel (1.22.0-1) ...
Setting up r-cran-callr (3.4.3-2) ...
Setting up r-bioc-rhtslib (1.20.0+dfsg-1) ...
Setting up r-cran-desc (1.2.0-3) ...
Setting up r-cran-munsell (0.5.0-2) ...
Setting up r-bioc-dirichletmultinomial (1.30.0-1) ...
Setting up r-cran-r.oo (1.23.0-2) ...
Setting up r-cran-reshape2 (1.4.4-2) ...
Setting up r-bioc-genomeinfodb (1.24.0-1) ...
Setting up r-cran-httr (1.4.1-2) ...
Setting up r-cran-scales (1.1.1-1) ...
Setting up r-bioc-xvector (0.28.0-1) ...
Setting up r-cran-pkgbuild (1.0.8-2) ...
Setting up r-cran-vctrs (0.3.0-2) ...
Setting up r-cran-pillar (1.4.4-2) ...
Setting up r-cran-pkgload (1.0.2-2) ...
Setting up r-cran-r.utils (2.9.2-2) ...
Setting up r-bioc-genomicranges (1.40.0+dfsg-1) ...
Setting up r-bioc-biostrings (2.56.0-1) ...
Setting up r-cran-tibble (3.0.1-1+b1) ...
Setting up r-cran-testthat (2.3.2-2) ...
Setting up r-cran-isoband (0.2.1-1+b1) ...
Setting up r-cran-hms (0.5.3-2) ...
Setting up r-cran-blob (1.2.1-2) ...
Setting up r-bioc-rsamtools (2.4.0-1) ...
Setting up r-cran-rsqlite (2.2.0-1+b1) ...
Setting up r-bioc-summarizedexperiment (1.18.1+dfsg-1) ...
Setting up r-bioc-keggrest (1.28.0+dfsg-1) ...
Setting up r-cran-ggplot2 (3.3.0+dfsg-2) ...
Setting up r-bioc-annotationdbi (1.50.0-1) ...
Setting up r-bioc-go.db (3.11.1-1) ...
Setting up r-bioc-annotate (1.66.0+dfsg-1) ...
Setting up r-cran-readr (1.3.1-1+b1) ...
Setting up r-bioc-genomicalignments (1.24.0-1) ...
Setting up r-bioc-rtracklayer (1.48.0-1) ...
Setting up r-bioc-cner (1.24.0+dfsg-1) ...
Setting up r-bioc-bsgenome (1.56.0-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.1) ...
Setting up dh-r (20200314) ...
Setting up sbuild-build-depends-r-bioc-tfbstools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-13+rpi1 gcc-9_9.3.0-13+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-2+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.4 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.35.1-5 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-13+rpi1 dash_0.5.10.2-7 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.1 debianutils_4.9.1 dh-autoreconf_19 dh-r_20200314 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-5 file_1:5.38-5 findutils_4.7.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-13+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-2+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1 gcc-8-base_8.4.0-3+rpi1 gcc-9_9.3.0-13+rpi1 gcc-9-base_9.3.0-13+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.3.0-13+rpi1 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_63.2-3 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-8 libapt-pkg6.0_2.1.4 libarchive-zip-perl_1.68-1 libasan5_9.3.0-13+rpi1 libassuan0_2.5.3-7 libatomic1_10.1.0-2+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblas-dev_3.9.0-2 libblas3_3.9.0-2 libblkid1_2.35.1-5 libboost-dev_1.67.0.2+b12 libboost1.67-dev_1.67.0-18 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1+b1 libcap2_1:2.34-2 libcap2-bin_1:2.34-2 libcc1-0_10.1.0-2+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libcurl4_7.68.0-1 libdatrie1_0.2.12-3+b2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-5 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgcc-9-dev_9.3.0-13+rpi1 libgcc-s1_10.1.0-2+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.3.0-13+rpi1 libgfortran5_10.1.0-2+rpi1 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10.1.0-2+rpi1 libgpg-error0_1.37-1 libgraphite2-3_1.3.14-1 libgsl25_2.6+dfsg-2 libgslcblas0_2.6+dfsg-2 libgssapi-krb5-2_1.17-7+rpi1 libharfbuzz0b_2.6.4-1+rpi1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_63.2-3 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-7+rpi1 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7+rpi1 libkrb5support0_1.17-7+rpi1 libksba8_1.3.5-2 liblapack-dev_3.9.0-2 liblapack3_3.9.0-2 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.1-5 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.2-1 libncurses5-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-cap_1:2.34-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.44.7-4 libpangocairo-1.0-0_1.44.7-4 libpangoft2-1.0-0_1.44.7-4 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libpsl5_0.21.0-1 libreadline-dev_8.0-4 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.35.1-5 libsqlite3-0_3.31.1-5 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-2+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_245.5-3+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo5_6.2-1 libtinfo6_6.2-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libubsan1_10.1.0-2+rpi1 libuchardet0_0.0.6-3 libudev1_245.5-3+rpi1 libunistring2_0.9.10-2 libuuid1_2.35.1-5 libwebp6_0.6.1-2 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-5 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 littler_0.3.9-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.35.1-5 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.0-3 r-base-dev_4.0.0-3 r-bioc-annotate_1.66.0+dfsg-1 r-bioc-annotationdbi_1.50.0-1 r-bioc-biobase_2.48.0-1 r-bioc-biocgenerics_0.34.0-1 r-bioc-biocparallel_1.22.0-1 r-bioc-biostrings_2.56.0-1 r-bioc-bsgenome_1.56.0-1 r-bioc-cner_1.24.0+dfsg-1 r-bioc-delayedarray_0.14.0+dfsg-2 r-bioc-dirichletmultinomial_1.30.0-1 r-bioc-genomeinfodb_1.24.0-1 r-bioc-genomeinfodbdata_1.2.3-1 r-bioc-genomicalignments_1.24.0-1 r-bioc-genomicranges_1.40.0+dfsg-1 r-bioc-go.db_3.11.1-1 r-bioc-iranges_2.22.2-1 r-bioc-keggrest_1.28.0+dfsg-1 r-bioc-rhtslib_1.20.0+dfsg-1 r-bioc-rsamtools_2.4.0-1 r-bioc-rtracklayer_1.48.0-1 r-bioc-s4vectors_0.26.1-1 r-bioc-seqlogo_1.54.3-1 r-bioc-summarizedexperiment_1.18.1+dfsg-1 r-bioc-xvector_0.28.0-1 r-bioc-zlibbioc_1.34.0+dfsg-1 r-cran-askpass_1.1-1+b1 r-cran-assertthat_0.2.1-2 r-cran-backports_1.1.7-1 r-cran-bh_1.66.0-1 r-cran-bit_1.1-15.2-1+b1 r-cran-bit64_0.9-7-3+b1 r-cran-bitops_1.0-6-4+b1 r-cran-blob_1.2.1-2 r-cran-callr_3.4.3-2 r-cran-catools_1.18.0-1+b1 r-cran-cli_2.0.2-2 r-cran-clipr_0.7.0-2 r-cran-colorspace_1.4-1+dfsg-1+b1 r-cran-crayon_1.3.4-5 r-cran-curl_4.3+dfsg-1+b1 r-cran-dbi_1.1.0-3 r-cran-desc_1.2.0-3 r-cran-digest_0.6.25-1+b1 r-cran-ellipsis_0.3.1-1 r-cran-evaluate_0.14-2 r-cran-fansi_0.4.1-1+b1 r-cran-farver_2.0.3-1+b1 r-cran-formatr_1.7-2 r-cran-futile.logger_1.4.3-4 r-cran-futile.options_1.0.1-3 r-cran-ggplot2_3.3.0+dfsg-2 r-cran-glue_1.4.1-1 r-cran-gtable_0.3.0+dfsg-2 r-cran-gtools_3.8.2-1+b1 r-cran-hms_0.5.3-2 r-cran-httr_1.4.1-2 r-cran-isoband_0.2.1-1+b1 r-cran-jsonlite_1.6.1+dfsg-1+b1 r-cran-labeling_0.3-4 r-cran-lambda.r_1.2.4-2 r-cran-lattice_0.20-41-1+b1 r-cran-lifecycle_0.2.0-2 r-cran-littler_0.3.9-1+b1 r-cran-magrittr_1.5-6 r-cran-mass_7.3-51.6-1+b1 r-cran-matrix_1.2-18-1+b1 r-cran-matrixstats_0.56.0-1+b1 r-cran-memoise_1.1.0-3 r-cran-mgcv_1.8-31-1+b1 r-cran-mime_0.9-1+b1 r-cran-munsell_0.5.0-2 r-cran-nlme_3.1.147-1+b1 r-cran-openssl_1.4.1+dfsg-2+b1 r-cran-pillar_1.4.4-2 r-cran-pkgbuild_1.0.8-2 r-cran-pkgconfig_2.0.3-2 r-cran-pkgkitten_0.1.5-2 r-cran-pkgload_1.0.2-2 r-cran-plogr_0.2.0-3 r-cran-plyr_1.8.6-2 r-cran-png_0.1-7-3+b1 r-cran-powerlaw_0.70.6-2 r-cran-pracma_2.2.9-2 r-cran-praise_1.0.0-4 r-cran-prettyunits_1.1.1-2 r-cran-processx_3.4.2-1+b1 r-cran-ps_1.3.3-1+b1 r-cran-r.methodss3_1.8.0-2 r-cran-r.oo_1.23.0-2 r-cran-r.utils_2.9.2-2 r-cran-r6_2.4.1-2 r-cran-rcolorbrewer_1.1-2-3 r-cran-rcpp_1.0.4.6-1+b1 r-cran-rcurl_1.98-1.2-1+b1 r-cran-readr_1.3.1-1+b1 r-cran-reshape2_1.4.4-2 r-cran-rlang_0.4.6-1+b1 r-cran-rprojroot_1.3-2-3 r-cran-rsqlite_2.2.0-1+b1 r-cran-rstudioapi_0.11-2 r-cran-scales_1.1.1-1 r-cran-snow_1:0.4.3-2 r-cran-stringi_1.4.6-1+b1 r-cran-stringr_1.4.0-2 r-cran-sys_3.3-1+b1 r-cran-testthat_2.3.2-2 r-cran-tfmpvalue_0.0.8-1+b1 r-cran-tibble_3.0.1-1+b1 r-cran-utf8_1.1.4-1+b2 r-cran-vctrs_0.3.0-2 r-cran-viridislite_0.3.0-4 r-cran-withr_2.2.0-2 r-cran-xml_3.99-0.3-2+b1 r-cran-xtable_1:1.8-4-2 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-tfbstools-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0042 unzip_6.0-25 util-linux_2.35.1-5 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu May 21 12:54:34 2020 UTC
gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-tfbstools_1.26.0+dfsg-1.dsc
dpkg-source: info: extracting r-bioc-tfbstools in /<<BUILDDIR>>/r-bioc-tfbstools-1.26.0+dfsg
dpkg-source: info: unpacking r-bioc-tfbstools_1.26.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-tfbstools_1.26.0+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying Fix_autopkgtest.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-d8e15a5e-52a6-49ec-9fe5-4171db01fc43
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-bioc-tfbstools
dpkg-buildpackage: info: source version 1.26.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules binary-arch
dh binary-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: testthat
I: R Package: TFBSTools Version: 1.26.0
I: Building using R version 4.0.0-3
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 21 May 2020 14:37:39 +0200
mkdir -p /<<BUILDDIR>>/r-bioc-tfbstools-1.26.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library
R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-tfbstools-1.26.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 21 May 2020 14:37:39 +0200'"
* installing *source* package 'TFBSTools' ...
** using staged installation
** libs
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.26.0+dfsg/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c matrixAlignerDynamic.c -o matrixAlignerDynamic.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c R_init_TFBSTools.c -o R_init_TFBSTools.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o TFBSTools.so matrixAlignerDynamic.o R_init_TFBSTools.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.26.0+dfsg/src'
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.26.0+dfsg/src'
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.26.0+dfsg/src'
installing to /<<BUILDDIR>>/r-bioc-tfbstools-1.26.0+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library/00LOCK-r-bioc-tfbstools-1.26.0+dfsg/00new/TFBSTools/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'seqLogo' in package 'TFBSTools'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TFBSTools)
W: Ignoring specified R dependency: R (>= 3.2.2)
I: Using r-cran-testthat for Recommends:testthat
W: Cannot find a debian package for Suggests:BiocStyle (>= 1.7.7)
W: Cannot find a debian package for Suggests:JASPAR2014 (>= 1.4.0)
I: Using r-cran-knitr for Suggests:knitr (>= 1.11)
W: Cannot find a debian package for Suggests:JASPAR2016 (>= 1.0.0)
W: Cannot find a debian package for Suggests:JASPAR2018 (>= 1.0.0)
I: Using r-bioc-biobase for Imports:Biobase (>= 2.28)
I: Using r-bioc-biostrings for Imports:Biostrings (>= 2.36.4)
I: Using r-bioc-biocgenerics for Imports:BiocGenerics (>= 0.14.0)
I: Using r-bioc-biocparallel for Imports:BiocParallel (>= 1.2.21)
I: Using r-bioc-bsgenome for Imports:BSgenome (>= 1.36.3)
I: Using r-cran-catools for Imports:caTools (>= 1.17.1)
I: Using r-bioc-cner for Imports:CNEr (>= 1.4.0)
I: Using r-bioc-dirichletmultinomial for Imports:DirichletMultinomial (>= 1.10.0)
I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb (>= 1.6.1)
I: Using r-bioc-genomicranges for Imports:GenomicRanges (>= 1.20.6)
I: Using r-cran-gtools for Imports:gtools (>= 3.5.0)
I: Using r-bioc-iranges for Imports:IRanges (>= 2.2.7)
I: Using r-cran-dbi for Imports:DBI (>= 0.6)
I: Using r-cran-rsqlite for Imports:RSQLite (>= 1.0.0)
I: Using r-bioc-rtracklayer for Imports:rtracklayer (>= 1.28.10)
I: Using r-bioc-seqlogo for Imports:seqLogo (>= 1.34.0)
I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.9.25)
I: Using r-cran-tfmpvalue for Imports:TFMPvalue (>= 0.0.5)
I: Using r-cran-xml for Imports:XML (>= 3.98-1.3)
I: Using r-bioc-xvector for Imports:XVector (>= 0.8.0)
I: BioConductor API version: r-api-bioc-3.11
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_dwz -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-tfbstools-dbgsym' in '../r-bioc-tfbstools-dbgsym_1.26.0+dfsg-1_armhf.deb'.
dpkg-deb: building package 'r-bioc-tfbstools' in '../r-bioc-tfbstools_1.26.0+dfsg-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-bioc-tfbstools_1.26.0+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-05-31T13:23:49Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-bioc-tfbstools_1.26.0+dfsg-1_armhf.changes:
---------------------------------------------
Format: 1.8
Date: Thu, 21 May 2020 14:37:39 +0200
Source: r-bioc-tfbstools
Binary: r-bioc-tfbstools r-bioc-tfbstools-dbgsym
Architecture: armhf
Version: 1.26.0+dfsg-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
r-bioc-tfbstools - GNU R Transcription Factor Binding Site (TFBS) Analysis
Changes:
r-bioc-tfbstools (1.26.0+dfsg-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-bioc-tfbstools-dbgsym_1.26.0+dfsg-1_armhf.deb
-----------------------------------------------
new Debian package, version 2.0.
size 9268 bytes: control archive=544 bytes.
411 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-bioc-tfbstools-dbgsym
Source: r-bioc-tfbstools
Version: 1.26.0+dfsg-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 22
Depends: r-bioc-tfbstools (= 1.26.0+dfsg-1)
Section: debug
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Description: debug symbols for r-bioc-tfbstools
Build-Ids: 42da6d1d551229e2e2331668b71440b04bb14e26
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r-bioc-tfbstools_1.26.0+dfsg-1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 1108540 bytes: control archive=2524 bytes.
1431 bytes, 18 lines control
4535 bytes, 53 lines md5sums
Package: r-bioc-tfbstools
Version: 1.26.0+dfsg-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 1962
Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-api-bioc-3.11, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
Recommends: r-cran-testthat
Suggests: r-cran-knitr (>= 1.11)
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/TFBSTools/
Description: GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
and Information Content Matrix (ICM). It can also scan putative TFBS
from sequence/alignment, query JASPAR database and provides a wrapper of
de novo motif discovery software.
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+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 4128
Build-Time: 518
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1864
Job: r-bioc-tfbstools_1.26.0+dfsg-1
Machine Architecture: armhf
Package: r-bioc-tfbstools
Package-Time: 2431
Source-Version: 1.26.0+dfsg-1
Space: 4128
Status: successful
Version: 1.26.0+dfsg-1
--------------------------------------------------------------------------------
Finished at 2020-05-31T13:23:49Z
Build needed 00:40:31, 4128k disc space