r-bioc-tfbstools →
1.24.0+dfsg-1 →
armhf → 2019-11-19 07:01:52
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04
+==============================================================================+
| r-bioc-tfbstools 1.24.0+dfsg-1 (armhf) Tue, 19 Nov 2019 06:24:26 +0000 |
+==============================================================================+
Package: r-bioc-tfbstools
Version: 1.24.0+dfsg-1
Source Version: 1.24.0+dfsg-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-a29f4f5e-b46a-4cf8-b38a-ecbaee000e51' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.4 MB in 26s (932 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-bioc-tfbstools' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-tfbstools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 124 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.24.0+dfsg-1 (dsc) [2669 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.24.0+dfsg-1 (tar) [118 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-bioc-tfbstools 1.24.0+dfsg-1 (diff) [2900 B]
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I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-SXM51V/r-bioc-tfbstools-1.24.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-tfbstools-SXM51V' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-SFtGmX/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-SFtGmX/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-SFtGmX/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2778 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 2 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12227 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector (>= 0.8.0)
Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools, r-bioc-cner, r-bioc-dirichletmultinomial, r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo, r-bioc-s4vectors, r-cran-tfmpvalue, r-cran-xml, r-bioc-xvector (>= 0.8.0)
dpkg-deb: building package 'sbuild-build-depends-r-bioc-tfbstools-dummy' in '/<<BUILDDIR>>/resolver-SFtGmX/apt_archive/sbuild-build-depends-r-bioc-tfbstools-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-tfbstools-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Sources [710 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ Packages [794 B]
Fetched 2837 B in 1s (3672 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-bioc-tfbstools build dependencies (apt-based resolver)
----------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3
libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
libgraphite2-3 libgsl23 libgslcblas0 libgssapi-krb5-2 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
libtinfo5 libtk8.6 libtool libuchardet0 libwebp6 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db openssl
pkg-config po-debconf r-base-core r-base-dev r-bioc-annotate
r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biocparallel
r-bioc-biostrings r-bioc-bsgenome r-bioc-cner r-bioc-delayedarray
r-bioc-dirichletmultinomial r-bioc-genomeinfodb r-bioc-genomeinfodbdata
r-bioc-genomicalignments r-bioc-genomicranges r-bioc-go.db r-bioc-iranges
r-bioc-keggrest r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4vectors
r-bioc-seqlogo r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc
r-cran-askpass r-cran-assertthat r-cran-backports r-cran-bit r-cran-bit64
r-cran-bitops r-cran-blob r-cran-catools r-cran-cli r-cran-clipr
r-cran-colorspace r-cran-crayon r-cran-curl r-cran-dbi r-cran-digest
r-cran-ellipsis r-cran-fansi r-cran-formatr r-cran-futile.logger
r-cran-futile.options r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools
r-cran-hms r-cran-httr r-cran-jsonlite r-cran-labeling r-cran-lambda.r
r-cran-lattice r-cran-lazyeval r-cran-littler r-cran-magrittr r-cran-mass
r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime
r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig
r-cran-pkgkitten r-cran-plyr r-cran-png r-cran-powerlaw r-cran-prettyunits
r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rcolorbrewer
r-cran-rcpp r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-rlang
r-cran-rsqlite r-cran-scales r-cran-snow r-cran-stringi r-cran-stringr
r-cran-sys r-cran-tfmpvalue r-cran-tibble r-cran-utf8 r-cran-vctrs
r-cran-vgam r-cran-viridislite r-cran-withr r-cran-xml r-cran-xtable
r-cran-zeallot sensible-utils ucf unzip x11-common xauth xdg-utils zip
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-9-doc libgfortran5-dbg libcoarrays-dev groff
liblapack-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html
krb5-doc krb5-user icu-doc liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6
libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl
elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base
texlive-latex-base texlive-plain-generic texlive-fonts-recommended
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo r-bioc-genefilter r-cran-runit r-bioc-graph
r-cran-knitr r-bioc-all r-bioc-affy r-bioc-deseq2 r-cran-foreach
r-cran-bbmisc r-bioc-variantannotation r-bioc-shortread r-cran-codetools
r-cran-data.table r-bioc-genomicfeatures r-cran-biocmanager r-bioc-gviz
r-cran-rmarkdown r-cran-testthat r-bioc-edger r-bioc-annotationhub
r-bioc-limma r-bioc-rhdf5 r-cran-rpart r-cran-webshot r-cran-rstudioapi
r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny
r-cran-shinyjs r-cran-dplyr r-cran-viridis r-cran-rmysql r-cran-hmisc
r-cran-maps r-cran-maptools r-cran-multcomp r-cran-quantreg r-cran-sf
r-cran-svglite r-cran-forcats r-cran-lubridate r-cran-httpuv r-cran-jpeg
r-cran-xml2 r-cran-getopt r-cran-base64enc libgdal-dev r-cran-doparallel
r-cran-iterators r-cran-inline r-cran-covr r-cran-dichromat r-cran-rmpi
r-cran-rsprng r-cran-rlecuyer r-cran-htmltools r-cran-generics r-cran-plm
r-cran-zoo r-cran-survival r-cran-purrr
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
r-cran-runit r-cran-batchjobs r-cran-doparallel r-cran-batchtools
r-cran-rmpi r-bioc-biovizbase r-bioc-genefilter r-bioc-shortread
r-cran-testthat r-cran-mockery r-cran-httpuv r-cran-webutils r-cran-testit
r-cran-codetools r-cran-survival r-cran-sp r-cran-mapproj r-cran-hexbin
r-cran-lubridate r-cran-domc r-cran-abind r-cran-rmarkdown r-cran-dbitest
r-cran-htmltools r-cran-htmlwidgets r-cran-data.table r-cran-knitr
r-cran-dplyr r-cran-mockr libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3
libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
libgraphite2-3 libgsl23 libgslcblas0 libgssapi-krb5-2 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
libtinfo5 libtk8.6 libtool libuchardet0 libwebp6 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db openssl
pkg-config po-debconf r-base-core r-base-dev r-bioc-annotate
r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biocparallel
r-bioc-biostrings r-bioc-bsgenome r-bioc-cner r-bioc-delayedarray
r-bioc-dirichletmultinomial r-bioc-genomeinfodb r-bioc-genomeinfodbdata
r-bioc-genomicalignments r-bioc-genomicranges r-bioc-go.db r-bioc-iranges
r-bioc-keggrest r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4vectors
r-bioc-seqlogo r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc
r-cran-askpass r-cran-assertthat r-cran-backports r-cran-bit r-cran-bit64
r-cran-bitops r-cran-blob r-cran-catools r-cran-cli r-cran-clipr
r-cran-colorspace r-cran-crayon r-cran-curl r-cran-dbi r-cran-digest
r-cran-ellipsis r-cran-fansi r-cran-formatr r-cran-futile.logger
r-cran-futile.options r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools
r-cran-hms r-cran-httr r-cran-jsonlite r-cran-labeling r-cran-lambda.r
r-cran-lattice r-cran-lazyeval r-cran-littler r-cran-magrittr r-cran-mass
r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime
r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig
r-cran-pkgkitten r-cran-plyr r-cran-png r-cran-powerlaw r-cran-prettyunits
r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rcolorbrewer
r-cran-rcpp r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-rlang
r-cran-rsqlite r-cran-scales r-cran-snow r-cran-stringi r-cran-stringr
r-cran-sys r-cran-tfmpvalue r-cran-tibble r-cran-utf8 r-cran-vctrs
r-cran-vgam r-cran-viridislite r-cran-withr r-cran-xml r-cran-xtable
r-cran-zeallot sbuild-build-depends-r-bioc-tfbstools-dummy sensible-utils
ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
0 upgraded, 234 newly installed, 0 to remove and 2 not upgraded.
Need to get 222 MB of archives.
After this operation, 530 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SFtGmX/apt_archive ./ sbuild-build-depends-r-bioc-tfbstools-dummy 0.invalid.0 [1076 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-1 [1261 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.37-6 [253 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.37-6 [111 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.37-6 [66.2 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1d-2 [806 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-11 [547 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-1 [104 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.1-1 [23.5 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.1-1 [14.4 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-2 [136 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.7.1 [173 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.2-3 [1137 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b2 [571 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20191019-1 [79.5 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.7.1 [997 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.8.0-8 [107 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-1 [274 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-5 [257 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6-6 [14.0 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.39.2-1 [71.3 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.66.0-1+b1 [297 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-17+rpi1 [231 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.8.0-8 [1568 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.7-1.1 [62.8 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b1 [36.4 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.42.4-7+b1 [168 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-11 [70.1 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-7+b1 [62.2 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-7+b1 [51.9 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.9+dfsg-2 [878 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0-1 [249 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.9-2 [664 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 3.6.1-7 [24.3 MB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.2.1-17+rpi1 [279 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.2.1-17+rpi1 [7451 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3+rpi1 [1432 B]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.8.0-8 [112 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.8.0-8 [2839 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.1+20191019-1 [284 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.1+20191019-1 [940 B]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-3 [114 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.32-5 [175 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.32-5 [168 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix0 armhf 10.32-5 [38.3 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.32-5 [572 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-1 [275 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-2 [163 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-2 [8846 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 3.6.1-7 [4488 B]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20190917 [36.2 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.5+dfsg-6 [79.0 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libgsl23 armhf 2.5+dfsg-6 [704 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.9-1 [308 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.9-1 [14.6 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocgenerics all 0.32.0-1 [639 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biobase armhf 2.46.0-1 [2229 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-s4vectors armhf 0.24.0-1 [1944 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-iranges armhf 2.20.0-1 [2217 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf r-cran-dbi all 1.0.0-2 [789 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit armhf 1.1-14-1 [218 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit64 armhf 0.9-7-3 [433 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf r-cran-magrittr all 1.5-5 [152 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf r-cran-assertthat all 0.2.1-1 [56.7 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf r-cran-prettyunits all 1.0.2-3 [32.4 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rlang armhf 0.4.1-1 [1102 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf r-cran-backports armhf 1.1.5-1 [57.9 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ellipsis armhf 0.3.0-1 [30.3 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf r-cran-digest armhf 0.6.22-1 [171 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf r-cran-glue armhf 1.3.1-1 [156 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf r-cran-zeallot all 0.1.0-2 [59.9 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vctrs armhf 0.2.0-1 [735 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf r-cran-blob all 1.2.0-1 [46.0 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf r-cran-memoise all 1.1.0-2 [38.6 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgconfig all 2.0.3-1 [19.7 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.1.5-1 [23.8 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.3-1 [1928 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rsqlite armhf 2.1.2-1 [804 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotationdbi all 1.48.0-1 [4629 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xml armhf 3.98-1.20-2 [1957 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xtable all 1:1.8-4-1 [691 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bitops armhf 1.0-6-4 [23.9 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcurl armhf 1.95-4.12-1 [722 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotate all 1.64.0+dfsg-1 [2113 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf r-cran-formatr all 1.7-1 [152 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lambda.r all 1.2.4-1 [119 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.options all 1.0.1-2 [19.8 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.logger all 1.4.3-3 [102 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf r-cran-snow all 1:0.4.3-1 [108 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocparallel armhf 1.20.0-1 [1070 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-zlibbioc all 1.32.0+dfsg-1 [8780 B]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-xvector armhf 0.26.0-1 [610 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biostrings armhf 2.54.0-1 [14.1 MB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodbdata all 1.2.2-1 [10.2 MB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodb all 1.22.0-1 [3687 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicranges armhf 1.38.0+dfsg-1 [1828 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rsamtools armhf 2.2.1-1 [3657 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrixstats armhf 0.55.0-1 [576 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lattice armhf 0.20-38-1 [1120 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrix armhf 1.2-17-2 [3458 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-delayedarray armhf 0.12.0+dfsg-1 [1666 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-summarizedexperiment all 1.16.0+dfsg-1 [1893 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicalignments armhf 1.22.0-1 [2124 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rtracklayer armhf 1.46.0-1 [2603 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-bsgenome all 1.54.0-1 [6987 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-4 [750 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cli all 1.1.0-1 [175 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fansi armhf 0.4.0-1 [330 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf r-cran-utf8 armhf 1.1.4-1+b1 [126 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pillar all 1.3.1-1 [203 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tibble armhf 2.0.1-1 [656 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf r-cran-hms all 0.5.2-1 [111 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r6 all 2.4.1-1 [79.4 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf r-cran-clipr all 0.7.0-1 [50.4 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf r-cran-readr armhf 1.3.1-1 [666 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plyr armhf 1.8.4-2 [811 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringi armhf 1.4.3-1 [679 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringr all 1.4.0-1 [198 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf r-cran-reshape2 armhf 1.4.3-2 [109 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtable all 0.3.0+dfsg-1 [164 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lazyeval armhf 0.2.2-1 [143 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mass armhf 7.3-51.4-2 [1118 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf r-cran-nlme armhf 3.1.142-1 [2249 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mgcv armhf 1.8-31-1 [2752 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf r-cran-labeling all 0.3-3 [61.4 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf r-cran-colorspace armhf 1.4-1+dfsg-1 [1584 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf r-cran-munsell all 0.5.0-1 [235 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcolorbrewer all 1.1-2-2 [54.3 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf r-cran-viridislite all 0.3.0-3 [59.2 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf r-cran-scales armhf 1.0.0-2 [541 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf r-cran-withr all 2.1.2-3 [152 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ggplot2 all 3.2.1+dfsg-1 [2882 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vgam armhf 1.1-1-1 [7701 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf r-cran-powerlaw all 0.70.2-1 [3341 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-go.db all 3.10.0-1 [16.1 MB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.methodss3 all 1.7.1-3 [77.5 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.oo all 1.23.0-1 [957 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r.utils all 2.9.0-1 [1386 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf r-cran-curl armhf 4.2+dfsg-1 [147 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf r-cran-jsonlite armhf 1.6+dfsg-1 [432 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mime armhf 0.7-1 [35.4 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf r-cran-sys armhf 3.3-1 [42.6 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf r-cran-askpass armhf 1.1-1 [21.8 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf r-cran-openssl armhf 1.4.1+dfsg-2 [370 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf r-cran-httr all 1.4.1-1 [480 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf r-cran-png armhf 0.1-7-3 [39.3 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-keggrest all 1.26.1+dfsg-1 [98.2 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-cner armhf 1.22.0+dfsg-1 [8272 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-dirichletmultinomial armhf 1.28.0-1 [535 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-seqlogo all 1.52.0-1 [350 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf r-cran-catools armhf 1.17.1.2-1 [201 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gtools armhf 3.8.1-1 [321 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tfmpvalue armhf 0.0.8-1 [50.8 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up r-cran-powerlaw (0.70.2-1) ...
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Setting up r-cran-catools (1.17.1.2-1) ...
Setting up r-bioc-iranges (2.20.0-1) ...
Setting up r-cran-rcurl (1.95-4.12-1) ...
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Setting up r-cran-pillar (1.3.1-1) ...
Setting up r-cran-ellipsis (0.3.0-1) ...
Setting up r-cran-openssl (1.4.1+dfsg-2) ...
Setting up r-cran-stringr (1.4.0-1) ...
Setting up r-bioc-biocparallel (1.20.0-1) ...
Setting up r-cran-munsell (0.5.0-1) ...
Setting up r-cran-tibble (2.0.1-1) ...
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Setting up r-cran-r.oo (1.23.0-1) ...
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Setting up r-bioc-xvector (0.26.0-1) ...
Setting up r-cran-vctrs (0.2.0-1) ...
Setting up r-bioc-delayedarray (0.12.0+dfsg-1) ...
Setting up r-cran-r.utils (2.9.0-1) ...
Setting up r-cran-ggplot2 (3.2.1+dfsg-1) ...
Setting up r-bioc-genomicranges (1.38.0+dfsg-1) ...
Setting up r-bioc-biostrings (2.54.0-1) ...
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Setting up r-cran-blob (1.2.0-1) ...
Setting up r-bioc-rsamtools (2.2.1-1) ...
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Setting up r-bioc-summarizedexperiment (1.16.0+dfsg-1) ...
Setting up r-bioc-keggrest (1.26.1+dfsg-1) ...
Setting up r-bioc-annotationdbi (1.48.0-1) ...
Setting up r-bioc-go.db (3.10.0-1) ...
Setting up r-bioc-annotate (1.64.0+dfsg-1) ...
Setting up r-cran-readr (1.3.1-1) ...
Setting up r-bioc-genomicalignments (1.22.0-1) ...
Setting up r-bioc-rtracklayer (1.46.0-1) ...
Setting up r-bioc-cner (1.22.0+dfsg-1) ...
Setting up r-bioc-bsgenome (1.54.0-1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.6.1-1) ...
Setting up debhelper (12.7.1) ...
Setting up dh-r (20190917) ...
Setting up sbuild-build-depends-r-bioc-tfbstools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-2+rpi1) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.33.1-2+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-17+rpi1 gcc-9_9.2.1-17+rpi1 libc6-dev_2.29-2+rpi1 libstdc++-9-dev_9.2.1-17+rpi1 libstdc++6_9.2.1-17+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.46 bash_5.0-5 binutils_2.33.1-2+rpi1 binutils-arm-linux-gnueabihf_2.33.1-2+rpi1 binutils-common_2.33.1-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3+rpi1 cpp-9_9.2.1-17+rpi1 dash_0.5.10.2-6 dctrl-tools_2.24-3 debconf_1.5.73 debhelper_12.7.1 debianutils_4.9 dh-autoreconf_19 dh-r_20190917 dh-strip-nondeterminism_1.6.1-1 diffutils_1:3.7-3 dirmngr_2.2.17-3+b1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-2 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3+rpi1 g++-9_9.2.1-17+rpi1 gcc_4:9.2.1-3+rpi1 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-6-base_6.5.0-1+rpi1+b3 gcc-9_9.2.1-17+rpi1 gcc-9-base_9.2.1-17+rpi1 gettext_0.19.8.1-9 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libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-1 libpng16-16_1.6.37-1 libpsl5_0.20.2-2 libreadline-dev_8.0-3 libreadline7_7.0-5 libreadline8_8.0-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-1+b1 libsasl2-modules-db_2.1.27+dfsg-1+b1 libseccomp2_2.4.1-2+rpi1 libselinux1_2.9-2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsqlite3-0_3.30.1-1 libss2_1.45.4-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-17+rpi1 libstdc++6_9.2.1-17+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_242-7+rpi1 libtasn1-6_4.14-3 libtcl8.6_8.6.9+dfsg-2 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0-1 libtinfo5_6.1+20191019-1 libtinfo6_6.1+20191019-1 libtk8.6_8.6.9-2 libtool_2.4.6-11 libubsan1_9.2.1-17+rpi1 libuchardet0_0.0.6-3 libudev1_242-7+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.4+dfsg1-7+b2 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.3+dfsg-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 littler_0.3.9-1 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 netbase_5.6 openssl_1.1.1d-2 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29-6 po-debconf_1.0.21 r-base-core_3.6.1-7 r-base-dev_3.6.1-7 r-bioc-annotate_1.64.0+dfsg-1 r-bioc-annotationdbi_1.48.0-1 r-bioc-biobase_2.46.0-1 r-bioc-biocgenerics_0.32.0-1 r-bioc-biocparallel_1.20.0-1 r-bioc-biostrings_2.54.0-1 r-bioc-bsgenome_1.54.0-1 r-bioc-cner_1.22.0+dfsg-1 r-bioc-delayedarray_0.12.0+dfsg-1 r-bioc-dirichletmultinomial_1.28.0-1 r-bioc-genomeinfodb_1.22.0-1 r-bioc-genomeinfodbdata_1.2.2-1 r-bioc-genomicalignments_1.22.0-1 r-bioc-genomicranges_1.38.0+dfsg-1 r-bioc-go.db_3.10.0-1 r-bioc-iranges_2.20.0-1 r-bioc-keggrest_1.26.1+dfsg-1 r-bioc-rsamtools_2.2.1-1 r-bioc-rtracklayer_1.46.0-1 r-bioc-s4vectors_0.24.0-1 r-bioc-seqlogo_1.52.0-1 r-bioc-summarizedexperiment_1.16.0+dfsg-1 r-bioc-xvector_0.26.0-1 r-bioc-zlibbioc_1.32.0+dfsg-1 r-cran-askpass_1.1-1 r-cran-assertthat_0.2.1-1 r-cran-backports_1.1.5-1 r-cran-bit_1.1-14-1 r-cran-bit64_0.9-7-3 r-cran-bitops_1.0-6-4 r-cran-blob_1.2.0-1 r-cran-catools_1.17.1.2-1 r-cran-cli_1.1.0-1 r-cran-clipr_0.7.0-1 r-cran-colorspace_1.4-1+dfsg-1 r-cran-crayon_1.3.4-4 r-cran-curl_4.2+dfsg-1 r-cran-dbi_1.0.0-2 r-cran-digest_0.6.22-1 r-cran-ellipsis_0.3.0-1 r-cran-fansi_0.4.0-1 r-cran-formatr_1.7-1 r-cran-futile.logger_1.4.3-3 r-cran-futile.options_1.0.1-2 r-cran-ggplot2_3.2.1+dfsg-1 r-cran-glue_1.3.1-1 r-cran-gtable_0.3.0+dfsg-1 r-cran-gtools_3.8.1-1 r-cran-hms_0.5.2-1 r-cran-httr_1.4.1-1 r-cran-jsonlite_1.6+dfsg-1 r-cran-labeling_0.3-3 r-cran-lambda.r_1.2.4-1 r-cran-lattice_0.20-38-1 r-cran-lazyeval_0.2.2-1 r-cran-littler_0.3.9-1 r-cran-magrittr_1.5-5 r-cran-mass_7.3-51.4-2 r-cran-matrix_1.2-17-2 r-cran-matrixstats_0.55.0-1 r-cran-memoise_1.1.0-2 r-cran-mgcv_1.8-31-1 r-cran-mime_0.7-1 r-cran-munsell_0.5.0-1 r-cran-nlme_3.1.142-1 r-cran-openssl_1.4.1+dfsg-2 r-cran-pillar_1.3.1-1 r-cran-pkgconfig_2.0.3-1 r-cran-pkgkitten_0.1.5-1 r-cran-plyr_1.8.4-2 r-cran-png_0.1-7-3 r-cran-powerlaw_0.70.2-1 r-cran-prettyunits_1.0.2-3 r-cran-r.methodss3_1.7.1-3 r-cran-r.oo_1.23.0-1 r-cran-r.utils_2.9.0-1 r-cran-r6_2.4.1-1 r-cran-rcolorbrewer_1.1-2-2 r-cran-rcpp_1.0.3-1 r-cran-rcurl_1.95-4.12-1 r-cran-readr_1.3.1-1 r-cran-reshape2_1.4.3-2 r-cran-rlang_0.4.1-1 r-cran-rsqlite_2.1.2-1 r-cran-scales_1.0.0-2 r-cran-snow_1:0.4.3-1 r-cran-stringi_1.4.3-1 r-cran-stringr_1.4.0-1 r-cran-sys_3.3-1 r-cran-tfmpvalue_0.0.8-1 r-cran-tibble_2.0.1-1 r-cran-utf8_1.1.4-1+b1 r-cran-vctrs_0.2.0-1 r-cran-vgam_1.1-1-1 r-cran-viridislite_0.3.0-3 r-cran-withr_2.1.2-3 r-cran-xml_3.98-1.20-2 r-cran-xtable_1:1.8-4-1 r-cran-zeallot_0.1.0-2 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-tfbstools-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96-1 tar_1.30+dfsg-6 tzdata_2019c-3 ucf_3.0038+nmu1 unzip_6.0-25 util-linux_2.34-0.1 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-1 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Nov 12 20:50:48 2019 UTC
gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: issuer "daissi@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-tfbstools_1.24.0+dfsg-1.dsc
dpkg-source: info: extracting r-bioc-tfbstools in /<<BUILDDIR>>/r-bioc-tfbstools-1.24.0+dfsg
dpkg-source: info: unpacking r-bioc-tfbstools_1.24.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-tfbstools_1.24.0+dfsg-1.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-a29f4f5e-b46a-4cf8-b38a-ecbaee000e51
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-bioc-tfbstools
dpkg-buildpackage: info: source version 1.24.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules build-arch
dh build-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: testthat
I: R Package: TFBSTools Version: 1.24.0
I: Building using R version 3.6.1-7
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Tue, 12 Nov 2019 21:40:26 +0100
mkdir -p /<<BUILDDIR>>/r-bioc-tfbstools-1.24.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library
R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-tfbstools-1.24.0\+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 12 Nov 2019 21:40:26 +0100'"
* installing *source* package 'TFBSTools' ...
** using staged installation
** libs
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.24.0+dfsg/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jEdEmw/r-base-3.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c matrixAlignerDynamic.c -o matrixAlignerDynamic.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jEdEmw/r-base-3.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c R_init_TFBSTools.c -o R_init_TFBSTools.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o TFBSTools.so matrixAlignerDynamic.o R_init_TFBSTools.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.24.0+dfsg/src'
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.24.0+dfsg/src'
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-tfbstools-1.24.0+dfsg/src'
installing to /<<BUILDDIR>>/r-bioc-tfbstools-1.24.0+dfsg/debian/r-bioc-tfbstools/usr/lib/R/site-library/00LOCK-r-bioc-tfbstools-1.24.0+dfsg/00new/TFBSTools/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'IRanges' for request: 'score' when loading 'TFBSTools'
Creating a new generic function for 'seqLogo' in package 'TFBSTools'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'IRanges' for request: 'score' when loading 'TFBSTools'
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
No methods found in package 'IRanges' for request: 'score' when loading 'TFBSTools'
** testing if installed package keeps a record of temporary installation path
* DONE (TFBSTools)
W: Ignoring specified R dependency: R (>= 3.2.2)
I: Using r-cran-testthat for Recommends:testthat
W: Cannot find a debian package for Suggests:BiocStyle (>= 1.7.7)
W: Cannot find a debian package for Suggests:JASPAR2014 (>= 1.4.0)
I: Using r-cran-knitr for Suggests:knitr (>= 1.11)
W: Cannot find a debian package for Suggests:JASPAR2016 (>= 1.0.0)
W: Cannot find a debian package for Suggests:JASPAR2018 (>= 1.0.0)
I: Using r-bioc-biobase for Imports:Biobase (>= 2.28)
I: Using r-bioc-biostrings for Imports:Biostrings (>= 2.36.4)
I: Using r-bioc-biocgenerics for Imports:BiocGenerics (>= 0.14.0)
I: Using r-bioc-biocparallel for Imports:BiocParallel (>= 1.2.21)
I: Using r-bioc-bsgenome for Imports:BSgenome (>= 1.36.3)
I: Using r-cran-catools for Imports:caTools (>= 1.17.1)
I: Using r-bioc-cner for Imports:CNEr (>= 1.4.0)
I: Using r-bioc-dirichletmultinomial for Imports:DirichletMultinomial (>= 1.10.0)
I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb (>= 1.6.1)
I: Using r-bioc-genomicranges for Imports:GenomicRanges (>= 1.20.6)
I: Using r-cran-gtools for Imports:gtools (>= 3.5.0)
I: Using r-bioc-iranges for Imports:IRanges (>= 2.2.7)
I: Using r-cran-dbi for Imports:DBI (>= 0.6)
I: Using r-cran-rsqlite for Imports:RSQLite (>= 1.0.0)
I: Using r-bioc-rtracklayer for Imports:rtracklayer (>= 1.28.10)
I: Using r-bioc-seqlogo for Imports:seqLogo (>= 1.34.0)
I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.9.25)
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Build finished at 2019-11-19T07:01:44Z
Finished
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I: Built successfully
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r-bioc-tfbstools_1.24.0+dfsg-1_armhf.changes:
---------------------------------------------
Format: 1.8
Date: Tue, 12 Nov 2019 21:40:26 +0100
Source: r-bioc-tfbstools
Binary: r-bioc-tfbstools r-bioc-tfbstools-dbgsym
Architecture: armhf
Version: 1.24.0+dfsg-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
r-bioc-tfbstools - GNU R Transcription Factor Binding Site (TFBS) Analysis
Changes:
r-bioc-tfbstools (1.24.0+dfsg-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
* Fixed debian/watch for BioConductor
* debhelper-compat 12
* Standards-Version: 4.4.1
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Depends: r-base-core (>= 3.6.1-7), r-api-3.5, r-api-bioc-3.10, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
Recommends: r-cran-testthat
Suggests: r-cran-knitr (>= 1.11)
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/TFBSTools/
Description: GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
and Information Content Matrix (ICM). It can also scan putative TFBS
from sequence/alignment, query JASPAR database and provides a wrapper of
de novo motif discovery software.
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Build Architecture: armhf
Build-Space: 3688
Build-Time: 465
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Status: successful
Version: 1.24.0+dfsg-1
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Finished at 2019-11-19T07:01:44Z
Build needed 00:37:18, 3688k disc space